Pregenerated sensors for PCK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027513Ensembl transcript IDs: ENSMUST00000029017.6
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCTCAAAGCTGGAGCAGGCTGGCTTTCTCCTAGATCTCAGCGCATaGTGTGAGTGGGAAGGGGTGACTCTCGAGACGCCCCCATTGGGA | + |
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Preference number: 1 (lower is better) Translates to: ISKLEQAGFLLDLSA*CEWEGVTLETPPLG Trigger: TCCCAATGGGGGCGTCTCGAGAGTCACCCCTTCCCACTCACAGCATGCGCTGAGATCTAGGAGAAAGCCAGCCTGCTCCAGCTTTGAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| 3UTR-3UTR GCA 90 bp | GTGGAACCAAAACCCCCATTGGTGTCAAATGCAAACTTCAGAGACTATGCGGTGCTAGATCTCAGCGCATaGTGTGAGTGGGAAGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: VEPKPPLVSNANFRDYAVLDLSA*CEWEGV Trigger: CACCCCTTCCCACTCACAGCATGCGCTGAGATCTAG...CACCGCATAGTCTCTGAAGTTTGCATTTGACACCAATGGGGGTTTTGGTTCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| 3UTR-3UTR TCA 90 bp | CCTGTTCTCTGTGCTACTCAACTGACTATTAAAAGGTGCTTTTCTGATCTACTCTCTCAGCGCATGCTGTaGGTGGGAAGGGGTGACTCT | + |
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Preference number: 2 (lower is better) Translates to: PVLCATQLTIKRCFSDLLSQRML*VGRGDS Trigger: AGAGTCACCCCTTCCCACTCACAGCATGCGCTGAGA...GAGTAGATCAGAAAAGCACCTTTTAATAGTCAGTTGAGTAGCACAGAGAACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGGTTTTAAATATACTGTGGACAATGGGACAGACAGGCATGTACACACACAAAGCTGGAGCAGGCTaGCTTTCTCCTAGATCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PKVLNILWTMGQTGMYTHKAGAG*LSPRSQ Trigger: CTGAGATCTAGGAGAAAGCCAGCCTGCTCCAGCTTT...GTGTGTGTACATGCCTGTCTGTCCCATTGTCCACAGTATATTTAAAACCTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| 3UTR-3UTR GCA 90 bp | ACACACACACATGCTCACACAGAGACACGTTCACACACATATATACAGCTCAAGATCTACTCAGCATTGTaGCGCTATCTCAAAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: THTHAHTETRSHTYIQLKIYSAL*RYLKAG Trigger: TCCAGCTTTGAGATAGCGGCACAATGCTGAGTAGAT...CTTGAGCTGTATATATGTGTGTGAACGTGTCTCTGTGTGAGCATGTGTGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGGTTTTAAATATACTGTGGACAATGGGACAGACAGGCATGTACACACACTCTGTGCTACTCAACTaGCTATTAAAAGGTGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: PKVLNILWTMGQTGMYTHSVLLN*LLKGAF Trigger: AAAAGCACCTTTTAATAGTCAGTTGAGTAGCACAGA...GTGTGTGTACATGCCTGTCTGTCCCATTGTCCACAGTATATTTAAAACCTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTTTTAAATATACTGTGGACAATGGGACAGACAGGCATGTACACACACACAACCAAAACCCCCATTaGTGTCAAATGCAAACTTCA | + |
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Preference number: 2 (lower is better) Translates to: KGFKYTVDNGTDRHVHTHNQNPH*CQMQTS Trigger: TGAAGTTTGCATTTGACACCAATGGGGGTTTTGGTT...GTGTGTGTGTACATGCCTGTCTGTCCCATTGTCCACAGTATATTTAAAACCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| 3UTR-3UTR CCA 90 bp | ACATACATACTAGCAACAAAGCAACATGACTCTCTAGTTACAGCTACAAATTTGATATACTGTGGACAATaGGACAGACAGGCATGTACA | + |
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Preference number: 2 (lower is better) Translates to: TYILATKQHDSLVTATNLIYCGQ*DRQACT Trigger: TGTACATGCCTGTCTGTCCCATTGTCCACAGTATAT...CAAATTTGTAGCTGTAACTAGAGAGTCATGTTGCTTTGTTGCTAGTATGTATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| 3UTR GCA 72 bp | CTGGAGCAGGCTGGCTTTCTCCTAGATCTCAGCGCATaGTGTGAGTGGGAAGGGGTGACTCTCGAGACGCCC | + |
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Preference number: 3 (lower is better) Translates to: LEQAGFLLDLSA*CEWEGVTLETP Trigger: GGGCGTCTCGAGAGTCACCCCTTCCCACTCACAGCATGCGCTGAGATCTAGGAGAAAGCCAGCCTGCTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| 3UTR TCA 72 bp | GCAGGCTGGCTTTCTCCTAGATCTCAGCGCATGCTGTaGGTGGGAAGGGGTGACTCTCGAGACGCCCCCATT | + |
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Preference number: 3 (lower is better) Translates to: AGWLSPRSQRML*VGRGDSRDAPI Trigger: AATGGGGGCGTCTCGAGAGTCACCCCTTCCCACTCACAGCATGCGCTGAGATCTAGGAGAAAGCCAGCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| 3UTR CCA 72 bp | GCTGGCTTTCTCCTAGATCTCAGCGCATGCTGTGAGTaGGAAGGGGTGACTCTCGAGACGCCCCCATTGGGA | + |
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Preference number: 3 (lower is better) Translates to: AGFLLDLSACCE*EGVTLETPPLG Trigger: TCCCAATGGGGGCGTCTCGAGAGTCACCCCTTCCCACTCACAGCATGCGCTGAGATCTAGGAGAAAGCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| 3UTR TCA 72 bp | CATTGGTGTCAAATGCAAACTTCAGAGACTATGCGGTaGTTTCCCCTCCCAATCTTATTTGCCCCTAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: HWCQMQTSETMR*FPLPILFAPSL Trigger: CAGGCTAGGGGCAAATAAGATTGGGAGGGGAAATCACCGCATAGTCTCTGAAGTTTGCATTTGACACCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CCA 90 bp | CTCAGCGCATGCTGTGAGTGGGAAGGGGTGACTCTCGAGACGCCCCCATTGGGAGCCTTTCATGCACCCTaGGAACCTGGCGTTGAATGC | + |
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Preference number: 4 (lower is better) Translates to: LSACCEWEGVTLETPPLGAFHAP*EPGVEC Trigger: GCATTCAACGCCAGGTTCCCAGGGTGCATGAAAGGC...TCCCAATGGGGGCGTCTCGAGAGTCACCCCTTCCCACTCACAGCATGCGCTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CCA 90 bp | CTCAGCGCATGCTGTGAGTGGGAAGGGGTGACTCTCGAGACGCCCCCATTGGGAAATCTCGAGTTGGGATaGGCACATGGTTCCGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: LSACCEWEGVTLETPPLGNLELG*AHGSAS Trigger: GGACGCGGAACCATGTGCCCATCCCAACTCGAGATT...TCCCAATGGGGGCGTCTCGAGAGTCACCCCTTCCCACTCACAGCATGCGCTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CCA 90 bp | TTTCTCCTAGATCTCAGCGCATGCTGTGAGTGGGAAGGGGTGACTCTCGAGACGATCCAGCGGCCCAGCTaGCTGAGGCCAGTTTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: FLLDLSACCEWEGVTLETIQRPS*LRPVLG Trigger: CCCCAAAACTGGCCTCAGCCAGCTGGGCCGCTGGAT...CGTCTCGAGAGTCACCCCTTCCCACTCACAGCATGCGCTGAGATCTAGGAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR TCA 90 bp | TCAAAGCTGGAGCAGGCTGGCTTTCTCCTAGATCTCAGCGCATGCTGTGAGTGGTGCCCATCCGAGTCATaGTCCGCATGCTGGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: SKLEQAGFLLDLSACCEWCPSES*SACWPP Trigger: TGGTGGCCAGCATGCGGATCATGACTCGGATGGGCA...CCACTCACAGCATGCGCTGAGATCTAGGAGAAAGCCAGCCTGCTCCAGCTTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CCA 90 bp | GGTGCTTTTCTGATCTACTCAGCATTGTGCCGCTATCTCAAAGCTGGAGCAGGCGGGCAACTTGGCTGCTaGGCGGTGGGCCATGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GAFLIYSALCRYLKAGAGGQLGC*AVGHAQ Trigger: CTGAGCATGGCCCACCGCCCAGCAGCCAAGTTGCCC...GCCTGCTCCAGCTTTGAGATAGCGGCACAATGCTGAGTAGATCAGAAAAGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR GCA 90 bp | CAGCATTGTGCCGCTATCTCAAAGCTGGAGCAGGCTGGCTTTCTCCTAGATCTCCACGAACTTCCTCACTaGCTGGGGCAGGCTGTCGAG | + |
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Preference number: 4 (lower is better) Translates to: QHCAAISKLEQAGFLLDLHELPH*LGQAVE Trigger: CTCGACAGCCTGCCCCAGGCAGTGAGGAAGTTCGTG...GAGATCTAGGAGAAAGCCAGCCTGCTCCAGCTTTGAGATAGCGGCACAATGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CCA 90 bp | GCTATCTCAAAGCTGGAGCAGGCTGGCTTTCTCCTAGATCTCAGCGCATGCTGTTCCACCCGGGCAGGCTaGGGTTCATCATGGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: AISKLEQAGFLLDLSACCSTRAG*GSSWPS Trigger: ACTTGGCCATGATGAACCCCAGCCTGCCCGGGTGGA...ACAGCATGCGCTGAGATCTAGGAGAAAGCCAGCCTGCTCCAGCTTTGAGATAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR TCA 90 bp | CTGATCTACTCAGCATTGTGCCGCTATCTCAAAGCTGGAGCAGGCTGGCTTTCTTCCGGCTGGCACAGCTaGGCATTGCCTTCCACGAAC | + |
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Preference number: 4 (lower is better) Translates to: LIYSALCRYLKAGAGWLSSGWHS*ALPSTN Trigger: GTTCGTGGAAGGCAATGCTCAGCTGTGCCAGCCGGA...AGAAAGCCAGCCTGCTCCAGCTTTGAGATAGCGGCACAATGCTGAGTAGATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR GCA 90 bp | TTTCTCCTAGATCTCAGCGCATGCTGTGAGTGGGAAGGGGTGACTCTCGAGACGCCTACAAACACCCCATaGTGCCAGCTGAGGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: FLLDLSACCEWEGVTLETPTNTP*CQLRAS Trigger: TGAAGCCCTCAGCTGGCAGCATGGGGTGTTTGTAGG...CGTCTCGAGAGTCACCCCTTCCCACTCACAGCATGCGCTGAGATCTAGGAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR GCA 90 bp | CAGCATTGTGCCGCTATCTCAAAGCTGGAGCAGGCTGGCTTTCTCCTAGATCTCACTGGCTGGCAGGGGTaGAGAATCTCGAGTTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: QHCAAISKLEQAGFLLDLTGWQG*RISSWD Trigger: ATCCCAACTCGAGATTCTGCACCCCTGCCAGCCAGT...GAGATCTAGGAGAAAGCCAGCCTGCTCCAGCTTTGAGATAGCGGCACAATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CCA 90 bp | AAGTGGAACCAAAACCCCCATTGGTGTCAAATGCAAACTTCAGAGACTATGCGGTTGGCTGCTGGGCGGTaGGCCATGCTCAGCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: KWNQNPHWCQMQTSETMRLAAGR*AMLSQW Trigger: CCACTGGCTGAGCATGGCCCACCGCCCAGCAGCCAA...CCGCATAGTCTCTGAAGTTTGCATTTGACACCAATGGGGGTTTTGGTTCCACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR TCA 90 bp | GCTATCTCAAAGCTGGAGCAGGCTGGCTTTCTCCTAGATCTCAGCGCATGCTGTTGGATTTGTCTTCACTaGGGTGCCAGGAGCAACTCC | + |
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Preference number: 4 (lower is better) Translates to: AISKLEQAGFLLDLSACCWICLH*GARSNS Trigger: GGAGTTGCTCCTGGCACCTCAGTGAAGACAAATCCA...ACAGCATGCGCTGAGATCTAGGAGAAAGCCAGCCTGCTCCAGCTTTGAGATAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CCA 90 bp | CAGCATTGTGCCGCTATCTCAAAGCTGGAGCAGGCTGGCTTTCTCCTAGATCTCTCTTGCTTTCGATCCTaGCCACATCTCGAGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: QHCAAISKLEQAGFLLDLSCFRS*PHLEGQ Trigger: CTGACCCTCGAGATGTGGCCAGGATCGAAAGCAAGA...GAGATCTAGGAGAAAGCCAGCCTGCTCCAGCTTTGAGATAGCGGCACAATGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CCA 90 bp | GCTATCTCAAAGCTGGAGCAGGCTGGCTTTCTCCTAGATCTCAGCGCATGCTGTTGGCCTCAGATCTCATaGCTGCTCCTACAAACACCC | + |
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Preference number: 4 (lower is better) Translates to: AISKLEQAGFLLDLSACCWPQIS*LLLQTP Trigger: GGGTGTTTGTAGGAGCAGCCATGAGATCTGAGGCCA...ACAGCATGCGCTGAGATCTAGGAGAAAGCCAGCCTGCTCCAGCTTTGAGATAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR TCA 90 bp | CCAAAGGTTTTAAATATACTGTGGACAATGGGACAGACAGGCATGTACACACACAGCGGCCCAGCTGGCTaGGGCCAGTTTTGGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: PKVLNILWTMGQTGMYTHSGPAG*GQFWGW Trigger: CCATCCCCAAAACTGGCCTCAGCCAGCTGGGCCGCT...GTGTGTGTACATGCCTGTCTGTCCCATTGTCCACAGTATATTTAAAACCTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR GCA 90 bp | GGAACCAAAACCCCCATTGGTGTCAAATGCAAACTTCAGAGACTATGCGGTGATTGGTGCGGCCTTTCATaGACCCTGGGAACCTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: GTKTPIGVKCKLQRLCGDWCGLS*TLGTWR Trigger: ACGCCAGGTTCCCAGGGTGCATGAAAGGCCGCACCA...ATCACCGCATAGTCTCTGAAGTTTGCATTTGACACCAATGGGGGTTTTGGTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR GCA 90 bp | AAAGGTTTTAAATATACTGTGGACAATGGGACAGACAGGCATGTACACACACACCTGGGCGGTGGGCCATaGTCAGCCAGTGGGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: KGFKYTVDNGTDRHVHTHLGGGP*SASGPG Trigger: ACCTGGCCCACTGGCTGAGCATGGCCCACCGCCCAG...GTGTGTGTGTACATGCCTGTCTGTCCCATTGTCCACAGTATATTTAAAACCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR TCA 90 bp | GGTGCTTTTCTGATCTACTCAGCATTGTGCCGCTATCTCAAAGCTGGAGCAGGCCTGGGAACCTGGCGTTaGATGCTTTCTCAAAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GAFLIYSALCRYLKAGAGLGTWR*MLSQSP Trigger: AGGACTTTGAGAAAGCATTCAACGCCAGGTTCCCAG...GCCTGCTCCAGCTTTGAGATAGCGGCACAATGCTGAGTAGATCAGAAAAGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR TCA 90 bp | GGTGCTTTTCTGATCTACTCAGCATTGTGCCGCTATCTCAAAGCTGGAGCAGGCTACGGCCACCAAAGATaGTACCCTCAATGGGTACTC | + |
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Preference number: 4 (lower is better) Translates to: GAFLIYSALCRYLKAGAGYGHQR*YPQWVL Trigger: GAGTACCCATTGAGGGTATCATCTTTGGTGGCCGTA...GCCTGCTCCAGCTTTGAGATAGCGGCACAATGCTGAGTAGATCAGAAAAGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR GCA 90 bp | AAGTGGAACCAAAACCCCCATTGGTGTCAAATGCAAACTTCAGAGACTATGCGGGGGCACCCCACAGAGTaGAGGCACTTGATGAACTCC | + |
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Preference number: 4 (lower is better) Translates to: KWNQNPHWCQMQTSETMRGHPTE*RHLMNS Trigger: GGAGTTCATCAAGTGCCTGCACTCTGTGGGGTGCCC...CCGCATAGTCTCTGAAGTTTGCATTTGACACCAATGGGGGTTTTGGTTCCACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR TCA 90 bp | ACACACACACACATGCTCACACAGAGACACGTTCACACACATATATACAGCTCACGCTTCCAAAGGAGATaGTCTCTCTGCGGTCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: THTHMLTQRHVHTHIYSSRFQRR*SLCGPG Trigger: TCCCGGACCGCAGAGAGATCATCTCCTTTGGAAGCG...TGAGCTGTATATATGTGTGTGAACGTGTCTCTGTGTGAGCATGTGTGTGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR GCA 90 bp | CCTGTTCTCTGTGCTACTCAACTGACTATTAAAAGGTGCTTTTCTGATCTACTCCTTGGGCAACTTGGCTaGTGGGCGGTGGGCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: PVLCATQLTIKRCFSDLLLGQLG*WAVGHA Trigger: AGCATGGCCCACCGCCCAGCAGCCAAGTTGCCCAAG...GAGTAGATCAGAAAAGCACCTTTTAATAGTCAGTTGAGTAGCACAGAGAACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| 3UTR CAA 72 bp | CAGAGACTATGCGGTGATTTCCCCTCCCAATCTTATTaGCCCCTAGCCTGTTCTCTGTGCTACTCAACTGAC | + |
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Preference number: 4 (lower is better) Translates to: QRLCGDFPSQSY*PLACSLCYSTD Trigger: GTCAGTTGAGTAGCACAGAGAACAGGCTAGGGGCAAATAAGATTGGGAGGGGAAATCACCGCATAGTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR TCA 90 bp | AAAGGTTTTAAATATACTGTGGACAATGGGACAGACAGGCATGTACACACACACCGAGGCTGCCCTGGATaGCCTTGGCAGAGAAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: KGFKYTVDNGTDRHVHTHRGCPG*PWQRSP Trigger: TGGACTTCTCTGCCAAGGTCATCCAGGGCAGCCTCG...GTGTGTGTGTACATGCCTGTCTGTCCCATTGTCCACAGTATATTTAAAACCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR GCA 90 bp | GGTGCTTTTCTGATCTACTCAGCATTGTGCCGCTATCTCAAAGCTGGAGCAGGCTTGTCTTCACTGAGGTaGCAGGAGCAACTCCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: GAFLIYSALCRYLKAGAGLSSLR*QEQLQK Trigger: TTTTTGGAGTTGCTCCTGGCACCTCAGTGAAGACAA...GCCTGCTCCAGCTTTGAGATAGCGGCACAATGCTGAGTAGATCAGAAAAGCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CCA 90 bp | CCAAAGGTTTTAAATATACTGTGGACAATGGGACAGACAGGCATGTACACACACCTGTCGAGGCTGCCCTaGATGACCTTGGCAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: PKVLNILWTMGQTGMYTHLSRLP*MTLAEK Trigger: CTTCTCTGCCAAGGTCATCCAGGGCAGCCTCGACAG...GTGTGTGTACATGCCTGTCTGTCCCATTGTCCACAGTATATTTAAAACCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CCA 90 bp | GGAACCAAAACCCCCATTGGTGTCAAATGCAAACTTCAGAGACTATGCGGTGATTCAATAATGGGGCACTaGCTGGCAGGGGTGCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: GTKTPIGVKCKLQRLCGDSIMGH*LAGVQN Trigger: ATTCTGCACCCCTGCCAGCCAGTGCCCCATTATTGA...ATCACCGCATAGTCTCTGAAGTTTGCATTTGACACCAATGGGGGTTTTGGTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR GCA 90 bp | AAAGGTTTTAAATATACTGTGGACAATGGGACAGACAGGCATGTACACACACACCCAGCGGCTCATCGATaGCTTCCCAGTAAACACCCC | + |
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Preference number: 4 (lower is better) Translates to: KGFKYTVDNGTDRHVHTHPAAHR*LPSKHP Trigger: GGGGTGTTTACTGGGAAGGCATCGATGAGCCGCTGG...GTGTGTGTGTACATGCCTGTCTGTCCCATTGTCCACAGTATATTTAAAACCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR TCA 90 bp | ACACACACACATGCTCACACAGAGACACGTTCACACACATATATACAGCTCAAGTCTCGGCCACGTTGGTaGAGATGGTGTTTTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: THTHAHTETRSHTYIQLKSRPRW*RWCFSG Trigger: TCCAGAAAAACACCATCTTCACCAACGTGGCCGAGA...CTTGAGCTGTATATATGTGTGTGAACGTGTCTCTGTGTGAGCATGTGTGTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR GCA 90 bp | CATGACTCTCTAGTTACAGCTACAAATTTGCCCAAGATTTTTCCCCAAAGGTTTATGACACCCTCCTCCTaGATGTGGGCCAGCAACTGC | + |
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Preference number: 4 (lower is better) Translates to: HDSLVTATNLPKIFPQRFMTPSS*MWASNC Trigger: GCAGTTGCTGGCCCACATGCAGGAGGAGGGTGTCAT...AAACCTTTGGGGAAAAATCTTGGGCAAATTTGTAGCTGTAACTAGAGAGTCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR GCA 90 bp | CCAAAGGTTTTAAATATACTGTGGACAATGGGACAGACAGGCATGTACACACACCTGGCCAGAGGAACTTaGCATCTTTGTCCTTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: PKVLNILWTMGQTGMYTHLARGT*HLCPSG Trigger: TCCGGAAGGACAAAGATGGCAAGTTCCTCTGGCCAG...GTGTGTGTACATGCCTGTCTGTCCCATTGTCCACAGTATATTTAAAACCTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR GCA 90 bp | CCAAAGGTTTTAAATATACTGTGGACAATGGGACAGACAGGCATGTACACACACAGTGGGCCAGGTATTTaGCGAAGTTGTAGCCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PKVLNILWTMGQTGMYTHSGPGI*RSCSRR Trigger: TCTTCGGCTACAACTTCGGCAAATACCTGGCCCACT...GTGTGTGTACATGCCTGTCTGTCCCATTGTCCACAGTATATTTAAAACCTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR GCA 90 bp | AAAGGTTTTAAATATACTGTGGACAATGGGACAGACAGGCATGTACACACACACGGCACTGTGTCTCTCTaGTCTTGGGTGATGATGACT | + |
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Preference number: 4 (lower is better) Translates to: KGFKYTVDNGTDRHVHTHGTVSL*SWVMMT Trigger: AGTCATCATCACCCAAGAGCAGAGAGACACAGTGCC...GTGTGTGTGTACATGCCTGTCTGTCCCATTGTCCACAGTATATTTAAAACCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS TCA 90 bp | CGAACTTCCTCACTGCCTGGGGCAGGCTGTCGAGGCTGCCCTGGATaGCCTTGGCAGAGAAGTCCAGACCGTTATGCAGCTGAGGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RTSSLPGAGCRGCPG*PWQRSPDRYAAEEA Trigger: TGCCTCCTCAGCTGCATAACGGTCTGGACTTCTCTGCCAAGGTCATCCAGGGCAGCCTCGACAGCCTGCCCCAGGCAGTGAGGAAGTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS TCA 90 bp | TCCTCGGAGCCATCGCAGATGTGGATATACTCCGGCTGGCACAGCTaGGCATTGCCTTCCACGAACTTCCTCACTGCCTGGGGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSEPSQMWIYSGWHS*ALPSTNFLTAWGRL Trigger: CAGCCTGCCCCAGGCAGTGAGGAAGTTCGTGGAAGGCAATGCTCAGCTGTGCCAGCCGGAGTATATCCACATCTGCGATGGCTCCGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS GCA 90 bp | AGCCATCGCAGATGTGGATATACTCCGGCTGGCACAGCTGAGCATTaGCTTCCACGAACTTCCTCACTGCCTGGGGCAGGCTGTCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SHRRCGYTPAGTAEH*LPRTSSLPGAGCRG Trigger: GCCTCGACAGCCTGCCCCAGGCAGTGAGGAAGTTCGTGGAAGGCAATGCTCAGCTGTGCCAGCCGGAGTATATCCACATCTGCGATGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS GCA 90 bp | TTCAGCTTGCGGATGACACCCTCCTCCTGCATGTGGGCCAGCAACTaGCCGTACTCCTCCTCGGAGCCATCGCAGATGTGGATATACTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSLRMTPSSCMWASN*PYSSSEPSQMWIYS Trigger: GGAGTATATCCACATCTGCGATGGCTCCGAGGAGGAGTACGGGCAGTTGCTGGCCCACATGCAGGAGGAGGGTGTCATCCGCAAGCTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS TCA 90 bp | TCTTCCCGAGTAGTGAGTTCCCACCATATCCGCTTCCAAAGGAGATaGTCTCTCTGCGGTCCGGGAGGTGGGCGATCAGGGTCAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSRVVSSHHIRFQRR*SLCGPGGGRSGSAQ Trigger: CTGAGCTGACCCTGATCGCCCACCTCCCGGACCGCAGAGAGATCATCTCCTTTGGAAGCGGATATGGTGGGAACTCACTACTCGGGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS TCA 90 bp | TCAGGGCTCGGAGCTCCCTCTCAATTTCGTAAGGGAGGTCGGTGTTaGCCTGGTCCTCCAGATACCTGTCGATCTCCTCCACCTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGLGAPSQFRKGGRC*PGPPDTCRSPPPPS Trigger: AGAAGGAGGTGGAGGAGATCGACAGGTATCTGGAGGACCAGGTCAACACCGACCTCCCTTACGAAATTGAGAGGGAGCTCCGAGCCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS GCA 90 bp | CAACAGTTGTCATATTTCTTCAGCTTGCGGATGACACCCTCCTCCTaGATGTGGGCCAGCAACTGCCCGTACTCCTCCTCGGAGCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: QQLSYFFSLRMTPSS*MWASNCPYSSSEPS Trigger: CGATGGCTCCGAGGAGGAGTACGGGCAGTTGCTGGCCCACATGCAGGAGGAGGGTGTCATCCGCAAGCTGAAGAAATATGACAACTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS GCA 90 bp | ATACATGGTGCGGCCTTTCATGCACCCTGGGAACCTGGCGTTGAATaGTTTCTCAAAGTCCTCTTCCGACATCCAGCGGCCCAGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IHGAAFHAPWEPGVE*FLKVLFRHPAAQLA Trigger: AGCCAGCTGGGCCGCTGGATGTCGGAAGAGGACTTTGAGAAAGCATTCAACGCCAGGTTCCCAGGGTGCATGAAAGGCCGCACCATGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS GCA 90 bp | TATTTCTTCTTGCCTTCGGGGTTAGTTATGCCCAGGATCAGCATATaGTCCGCCAGCCACCCTTCCTCCTTAGCCAGACGGCTGGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: YFFLPSGLVMPRISI*SASHPSSLARRLAI Trigger: GATCGCCAGCCGTCTGGCTAAGGAGGAAGGGTGGCTGGCGGAGCATATGCTGATCCTGGGCATAACTAACCCCGAAGGCAAGAAGAAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CAA 90 bp | TTTCTCCTAGATCTCAGCGCATGCTGTGAGTGGGAAGGGGTGACTCTCGAGACGGTGATGATGACTGTCTaGCTTTCGATCCTGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: FLLDLSACCEWEGVTLETVMMTV*LSILAT Trigger: TGTGGCCAGGATCGAAAGCAAGACAGTCATCATCAC...CGTCTCGAGAGTCACCCCTTCCCACTCACAGCATGCGCTGAGATCTAGGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CAA 90 bp | TTTCTCCTAGATCTCAGCGCATGCTGTGAGTGGGAAGGGGTGACTCTCGAGACGATGATGATCTTGCCCTaGTGTTCTGCAGCAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLLDLSACCEWEGVTLETMMILP*CSAAAV Trigger: CACAGCTGCTGCAGAACACAAGGGCAAGATCATCAT...CGTCTCGAGAGTCACCCCTTCCCACTCACAGCATGCGCTGAGATCTAGGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CAA 90 bp | CTGATCTACTCAGCATTGTGCCGCTATCTCAAAGCTGGAGCAGGCTGGCTTTCTTCCTTCCGGAACCAGTaGACATGGAAGATCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LIYSALCRYLKAGAGWLSSFRNQ*TWKILG Trigger: GCCCAAGATCTTCCATGTCAACTGGTTCCGGAAGGA...AGAAAGCCAGCCTGCTCCAGCTTTGAGATAGCGGCACAATGCTGAGTAGATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CAA 90 bp | CTGATCTACTCAGCATTGTGCCGCTATCTCAAAGCTGGAGCAGGCTGGCTTTCTTCATATTTCTTCAGCTaGCGGATGACACCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LIYSALCRYLKAGAGWLSSYFFS*RMTPSS Trigger: GGAGGAGGGTGTCATCCGCAAGCTGAAGAAATATGA...AGAAAGCCAGCCTGCTCCAGCTTTGAGATAGCGGCACAATGCTGAGTAGATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CAA 90 bp | GGTGCTTTTCTGATCTACTCAGCATTGTGCCGCTATCTCAAAGCTGGAGCAGGCCTAGTCTCGGCCACGTaGGTGAAGATGGTGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GAFLIYSALCRYLKAGAGLVSAT*VKMVFF Trigger: GAAAAACACCATCTTCACCAACGTGGCCGAGACTAG...GCCTGCTCCAGCTTTGAGATAGCGGCACAATGCTGAGTAGATCAGAAAAGCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CAA 90 bp | AGAACTGGATTCCTGAGTGACCTTGAAGTGGAACCAAAACCCCCATTGGTGTCATGCGGTCTCCACTCCTaGTTCTTCCAGGAGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RTGFLSDLEVEPKPPLVSCGLHS*FFQEVM Trigger: CATCACCTCCTGGAAGAACAAGGAGTGGAGACCGCA...TGACACCAATGGGGGTTTTGGTTCCACTTCAAGGTCACTCAGGAATCCAGTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CAA 90 bp | CTGATCTACTCAGCATTGTGCCGCTATCTCAAAGCTGGAGCAGGCTGGCTTTCTTCGTGCATGATGATCTaGCCCTTGTGTTCTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LIYSALCRYLKAGAGWLSSCMMI*PLCSAA Trigger: TGCTGCAGAACACAAGGGCAAGATCATCATGCACGA...AGAAAGCCAGCCTGCTCCAGCTTTGAGATAGCGGCACAATGCTGAGTAGATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAACCAAAACCCCCATTGGTGTCAAATGCAAACTTCAGAGACTATGCGGCCTGGCCAGAGGAACTaGCCATCTTTGTCCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: KWNQNPHWCQMQTSETMRPGQRN*PSLSFR Trigger: CCGGAAGGACAAAGATGGCAAGTTCCTCTGGCCAGG...CCGCATAGTCTCTGAAGTTTGCATTTGACACCAATGGGGGTTTTGGTTCCACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS-3UTR CAA 90 bp | CAGCATTGTGCCGCTATCTCAAAGCTGGAGCAGGCTGGCTTTCTCCTAGATCTCAGAGCCAGCCAACAGTaGTCATATTTCTTCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QHCAAISKLEQAGFLLDLRASQQ*SYFFSL Trigger: CAAGCTGAAGAAATATGACAACTGTTGGCTGGCTCT...GAGATCTAGGAGAAAGCCAGCCTGCTCCAGCTTTGAGATAGCGGCACAATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCAATCTTATTTGCCCCTAGCCTGTTCTCTGTGCTACTCAACTGACTATAGGAACTTGCCATCTTaGTCCTTCCGGAACCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSQSYLPLACSLCYSTDYRNLPS*SFRNQL Trigger: CAACTGGTTCCGGAAGGACAAAGATGGCAAGTTCCT...ATAGTCAGTTGAGTAGCACAGAGAACAGGCTAGGGGCAAATAAGATTGGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS-3UTR CAA 90 bp | ACACACACACACATGCTCACACAGAGACACGTTCACACACATATATACAGCTCACCTGGGAACCTGGCGTaGAATGCTTTCTCAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: THTHMLTQRHVHTHIYSSPGNLA*NAFSKS Trigger: GGACTTTGAGAAAGCATTCAACGCCAGGTTCCCAGG...TGAGCTGTATATATGTGTGTGAACGTGTCTCTGTGTGAGCATGTGTGTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS-3UTR CAA 90 bp | CCAAAGGTTTTAAATATACTGTGGACAATGGGACAGACAGGCATGTACACACACGTGCAGAATCTCGAGTaGGGATGGGCACATGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PKVLNILWTMGQTGMYTHVQNLE*GWAHGS Trigger: GGAACCATGTGCCCATCCCAACTCGAGATTCTGCAC...GTGTGTGTACATGCCTGTCTGTCCCATTGTCCACAGTATATTTAAAACCTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS-3UTR CAA 90 bp | CCTGTTCTCTGTGCTACTCAACTGACTATTAAAAGGTGCTTTTCTGATCTACTCTTGACATGGAAGATCTaGGGCAACTTGGCTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PVLCATQLTIKRCFSDLLLTWKI*GNLAAG Trigger: CCCAGCAGCCAAGTTGCCCAAGATCTTCCATGTCAA...GAGTAGATCAGAAAAGCACCTTTTAATAGTCAGTTGAGTAGCACAGAGAACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS GCA 72 bp | CGGATGACACCCTCCTCCTGCATGTGGGCCAGCAACTaGCCGTACTCCTCCTCGGAGCCATCGCAGATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RMTPSSCMWASN*PYSSSEPSQMW Trigger: CCACATCTGCGATGGCTCCGAGGAGGAGTACGGGCAGTTGCTGGCCCACATGCAGGAGGAGGGTGTCATCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS CCA 72 bp | CACTGGCTGGCAGGGGTGCAGAATCTCGAGTTGGGATaGGCACATGGTTCCGCGTCCTGCGGTCTCCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: HWLAGVQNLELG*AHGSASCGLHS Trigger: GGAGTGGAGACCGCAGGACGCGGAACCATGTGCCCATCCCAACTCGAGATTCTGCACCCCTGCCAGCCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS CAA 72 bp | TGGGCACATGGTTCCGCGTCCTGCGGTCTCCACTCCTaGTTCTTCCAGGAGGTGATGGTGACTCCCGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WAHGSASCGLHS*FFQEVMVTPGA Trigger: GGCCCCGGGAGTCACCATCACCTCCTGGAAGAACAAGGAGTGGAGACCGCAGGACGCGGAACCATGTGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS CAA 90 bp | GAGTTGGGATGGGCACATGGTTCCGCGTCCTGCGGTCTCCACTCCTaGTTCTTCCAGGAGGTGATGGTGACTCCCGGGGCCAGCGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ELGWAHGSASCGLHS*FFQEVMVTPGASGS Trigger: TGAGCCGCTGGCCCCGGGAGTCACCATCACCTCCTGGAAGAACAAGGAGTGGAGACCGCAGGACGCGGAACCATGTGCCCATCCCAACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS CCA 72 bp | TTCCTCACTGCCTGGGGCAGGCTGTCGAGGCTGCCCTaGATGACCTTGGCAGAGAAGTCCAGACCGTTATGC | + |
|
Preference number: 6 (lower is better) Translates to: FLTAWGRLSRLP*MTLAEKSRPLC Trigger: GCATAACGGTCTGGACTTCTCTGCCAAGGTCATCCAGGGCAGCCTCGACAGCCTGCCCCAGGCAGTGAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS CCA 72 bp | TTCTTCAGCTTGCGGATGACACCCTCCTCCTGCATGTaGGCCAGCAACTGCCCGTACTCCTCCTCGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: FFSLRMTPSSCM*ASNCPYSSSEP Trigger: TGGCTCCGAGGAGGAGTACGGGCAGTTGCTGGCCCACATGCAGGAGGAGGGTGTCATCCGCAAGCTGAAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS CCA 72 bp | GGCAGGGGTGCAGAATCTCGAGTTGGGATGGGCACATaGTTCCGCGTCCTGCGGTCTCCACTCCTTGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GRGAESRVGMGT*FRVLRSPLLVL Trigger: AAGAACAAGGAGTGGAGACCGCAGGACGCGGAACCATGTGCCCATCCCAACTCGAGATTCTGCACCCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS CAA 90 bp | CGAGGGTCAGTGAGAGCCAGCCAACAGTTGTCATATTTCTTCAGCTaGCGGATGACACCCTCCTCCTGCATGTGGGCCAGCAACTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RGSVRASQQLSYFFS*RMTPSSCMWASNCP Trigger: CGGGCAGTTGCTGGCCCACATGCAGGAGGAGGGTGTCATCCGCAAGCTGAAGAAATATGACAACTGTTGGCTGGCTCTCACTGACCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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| CDS CAA 90 bp | AAGTCCTCTTCCGACATCCAGCGGCCCAGCTGGCTGAGGCCAGTTTaGGGGATGGGCACTGTGTCTCTCTGCTCTTGGGTGATGATGACT | + |
|
Preference number: 6 (lower is better) Translates to: KSSSDIQRPSWLRPV*GMGTVSLCSWVMMT Trigger: AGTCATCATCACCCAAGAGCAGAGAGACACAGTGCCCATCCCCAAAACTGGCCTCAGCCAGCTGGGCCGCTGGATGTCGGAAGAGGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS TCA 72 bp | GTAGTGAGTTCCCACCATATCCGCTTCCAAAGGAGATaGTCTCTCTGCGGTCCGGGAGGTGGGCGATCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VVSSHHIRFQRR*SLCGPGGGRSG Trigger: CCCTGATCGCCCACCTCCCGGACCGCAGAGAGATCATCTCCTTTGGAAGCGGATATGGTGGGAACTCACTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS GCA 72 bp | AGATGTGGATATACTCCGGCTGGCACAGCTGAGCATTaGCTTCCACGAACTTCCTCACTGCCTGGGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RCGYTPAGTAEH*LPRTSSLPGAG Trigger: GCCTGCCCCAGGCAGTGAGGAAGTTCGTGGAAGGCAATGCTCAGCTGTGCCAGCCGGAGTATATCCACATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS GCA 72 bp | GCGGCCTTTCATGCACCCTGGGAACCTGGCGTTGAATaGTTTCTCAAAGTCCTCTTCCGACATCCAGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AAFHAPWEPGVE*FLKVLFRHPAA Trigger: GGCCGCTGGATGTCGGAAGAGGACTTTGAGAAAGCATTCAACGCCAGGTTCCCAGGGTGCATGAAAGGCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS GCA 72 bp | TTGCCTTCGGGGTTAGTTATGCCCAGGATCAGCATATaGTCCGCCAGCCACCCTTCCTCCTTAGCCAGACGG | + |
|
Preference number: 6 (lower is better) Translates to: LPSGLVMPRISI*SASHPSSLARR Trigger: CCGTCTGGCTAAGGAGGAAGGGTGGCTGGCGGAGCATATGCTGATCCTGGGCATAACTAACCCCGAAGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS CCA 72 bp | CATCCACTCCAGCACCCGGGAGTTCTCGCCAAAGCCTaGCCAGAGGAACTTGCCATCTTTGTCCTTCCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HPLQHPGVLAKA*PEELAIFVLPE Trigger: TTCCGGAAGGACAAAGATGGCAAGTTCCTCTGGCCAGGCTTTGGCGAGAACTCCCGGGTGCTGGAGTGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS CAA 90 bp | GGGATGGGCACTGTGTCTCTCTGCTCTTGGGTGATGATGACTGTCTaGCTTTCGATCCTGGCCACATCTCGAGGGTCAGTGAGAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GMGTVSLCSWVMMTV*LSILATSRGSVRAS Trigger: GCTGGCTCTCACTGACCCTCGAGATGTGGCCAGGATCGAAAGCAAGACAGTCATCATCACCCAAGAGCAGAGAGACACAGTGCCCATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS CAA 90 bp | GTCTTCCCACAGGCACTAGGGAAGGCTGCGGCCAGGTATTTCTTCTaGCCTTCGGGGTTAGTTATGCCCAGGATCAGCATATGCTCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VFPQALGKAAARYFF*PSGLVMPRISICSA Trigger: GGCGGAGCATATGCTGATCCTGGGCATAACTAACCCCGAAGGCAAGAAGAAATACCTGGCCGCAGCCTTCCCTAGTGCCTGTGGGAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS CAA 90 bp | ATGACATACATGGTGCGGCCTTTCATGCACCCTGGGAACCTGGCGTaGAATGCTTTCTCAAAGTCCTCTTCCGACATCCAGCGGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: MTYMVRPFMHPGNLA*NAFSKSSSDIQRPS Trigger: GCTGGGCCGCTGGATGTCGGAAGAGGACTTTGAGAAAGCATTCAACGCCAGGTTCCCAGGGTGCATGAAAGGCCGCACCATGTATGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS TCA 72 bp | CCAGCCAACAGTTGTCATATTTCTTCAGCTTGCGGATaGCACCCTCCTCCTGCATGTGGGCCAGCAACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PANSCHISSACG*HPPPACGPATA Trigger: GGCAGTTGCTGGCCCACATGCAGGAGGAGGGTGTCATCCGCAAGCTGAAGAAATATGACAACTGTTGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS TCA 72 bp | TGGTGCGGCCTTTCATGCACCCTGGGAACCTGGCGTTaGATGCTTTCTCAAAGTCCTCTTCCGACATCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WCGLSCTLGTWR*MLSQSPLPTSS Trigger: GCTGGATGTCGGAAGAGGACTTTGAGAAAGCATTCAACGCCAGGTTCCCAGGGTGCATGAAAGGCCGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS TCA 72 bp | GGAGCTCCCTCTCAATTTCGTAAGGGAGGTCGGTGTTaGCCTGGTCCTCCAGATACCTGTCGATCTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GAPSQFRKGGRC*PGPPDTCRSPP Trigger: TGGAGGAGATCGACAGGTATCTGGAGGACCAGGTCAACACCGACCTCCCTTACGAAATTGAGAGGGAGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS CAA 90 bp | TCGATCCTGGCCACATCTCGAGGGTCAGTGAGAGCCAGCCAACAGTaGTCATATTTCTTCAGCTTGCGGATGACACCCTCCTCCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: SILATSRGSVRASQQ*SYFFSLRMTPSSCM Trigger: CATGCAGGAGGAGGGTGTCATCCGCAAGCTGAAGAAATATGACAACTGTTGGCTGGCTCTCACTGACCCTCGAGATGTGGCCAGGATCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS CAA 72 bp | GCCACATCTCGAGGGTCAGTGAGAGCCAGCCAACAGTaGTCATATTTCTTCAGCTTGCGGATGACACCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ATSRGSVRASQQ*SYFFSLRMTPS Trigger: GGAGGGTGTCATCCGCAAGCTGAAGAAATATGACAACTGTTGGCTGGCTCTCACTGACCCTCGAGATGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS CAA 72 bp | ATGGTGCGGCCTTTCATGCACCCTGGGAACCTGGCGTaGAATGCTTTCTCAAAGTCCTCTTCCGACATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: MVRPFMHPGNLA*NAFSKSSSDIQ Trigger: CTGGATGTCGGAAGAGGACTTTGAGAAAGCATTCAACGCCAGGTTCCCAGGGTGCATGAAAGGCCGCACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS CAA 72 bp | CAGGCACTAGGGAAGGCTGCGGCCAGGTATTTCTTCTaGCCTTCGGGGTTAGTTATGCCCAGGATCAGCATA | + |
|
Preference number: 6 (lower is better) Translates to: QALGKAAARYFF*PSGLVMPRISI Trigger: TATGCTGATCCTGGGCATAACTAACCCCGAAGGCAAGAAGAAATACCTGGCCGCAGCCTTCCCTAGTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS CCA 72 bp | TGGGATGACATACATGGTGCGGCCTTTCATGCACCCTaGGAACCTGGCGTTGAATGCTTTCTCAAAGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WDDIHGAAFHAP*EPGVECFLKVL Trigger: GAGGACTTTGAGAAAGCATTCAACGCCAGGTTCCCAGGGTGCATGAAAGGCCGCACCATGTATGTCATCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS CAA 72 bp | ACTGTGTCTCTCTGCTCTTGGGTGATGATGACTGTCTaGCTTTCGATCCTGGCCACATCTCGAGGGTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TVSLCSWVMMTV*LSILATSRGSV Trigger: CACTGACCCTCGAGATGTGGCCAGGATCGAAAGCAAGACAGTCATCATCACCCAAGAGCAGAGAGACACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
||
| CDS TCA 72 bp | TCTTGCTTTCGATCCTGGCCACATCTCGAGGGTCAGTaGGAGCCAGCCAACAGTTGTCATATTTCTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SCFRSWPHLEGQ*EPANSCHISSA Trigger: AGCTGAAGAAATATGACAACTGTTGGCTGGCTCTCACTGACCCTCGAGATGTGGCCAGGATCGAAAGCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029017.6 |
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