Pregenerated sensors for PCIF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039849Ensembl transcript IDs: ENSMUST00000041643.5
Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTACTGTGCTTTTCCCTCCCCGGCAGCGGTGGCTGATGCTGCCATaGCCCAAGCCCAGGGCCTGTTTGGCACTGAGGAGGCAGTGCCGG | + |
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Preference number: 1 (lower is better) Translates to: LTVLFPPRQRWLMLP*PKPRACLALRRQCR Trigger: CCGGCACTGCCTCCTCAGTGCCAAACAGGCCCTGGGCTTGGGCCATGGCAGCATCAGCCACCGCTGCCGGGGAGGGAAAAGCACAGTAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR GCA 90 bp | TGTCTCCCCCAGCCAGCAGCTTGTCACCCAGGCTCAGCTGGAAGCTaGCGCACACTCCGCTGTCACAGGTATGGACCGGATACTGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: CLPQPAACHPGSAGS*RTLRCHRYGPDTAS Trigger: GCTGGCAGTATCCGGTCCATACCTGTGACAGCGGAGTGTGCGGCAGCTTCCAGCTGAGCCTGGGTGACAAGCTGCTGGCTGGGGGAGACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR TCA 90 bp | GGATGGTGTCCAGCACTTACTGCCTCAGGAGTACGTTGTGGTCCCTaGTGGCCATCATATCCAGGTAGGCCAGGCCTGGGGCAGGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: GWCPALTASGVRCGP*WPSYPGRPGLGQGG Trigger: CCCACCCTGCCCCAGGCCTGGCCTACCTGGATATGATGGCCATCAGGGACCACAACGTACTCCTGAGGCAGTAAGTGCTGGACACCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR CCA 90 bp | ATGTACCTGTCTCCCCCAGCCAGCAGCTTGTCACCCAGGCTCAGCTaGAAGCTGCCGCACACTCCGCTGTCACAGGTATGGACCGGATAC | + |
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Preference number: 1 (lower is better) Translates to: MYLSPPASSLSPRLS*KLPHTPLSQVWTGY Trigger: GTATCCGGTCCATACCTGTGACAGCGGAGTGTGCGGCAGCTTCCAGCTGAGCCTGGGTGACAAGCTGCTGGCTGGGGGAGACAGGTACAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR TCA 90 bp | GCTGTCACAGGTATGGACCGGATACTGCCAGCCAGGAGCCTGAGGTaGGGCCTTGCTCTTGGAGCCTCAGGCTTACTGTGCTTTTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: AVTGMDRILPARSLR*GLALGASGLLCFSL Trigger: GAGGGAAAAGCACAGTAAGCCTGAGGCTCCAAGAGCAAGGCCTCACCTCAGGCTCCTGGCTGGCAGTATCCGGTCCATACCTGTGACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR CCA 90 bp | CCAGCTTCCAGCTCCAACCCAGTGCTGCGTCTTCTGAGCTCTGTATaGGACCAGGGCCTAGAGCCCTGCTCTCCAGTGGGAAAGCTAAGA | + |
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Preference number: 1 (lower is better) Translates to: PASSSNPVLRLLSSV*DQGLEPCSPVGKLR Trigger: TCTTAGCTTTCCCACTGGAGAGCAGGGCTCTAGGCCCTGGTCCCATACAGAGCTCAGAAGACGCAGCACTGGGTTGGAGCTGGAAGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR TCA 90 bp | ACTCCGCTGTCACAGGTATGGACCGGATACTGCCAGCCAGGAGCCTaGGGTGAGGCCTTGCTCTTGGAGCCTCAGGCTTACTGTGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: TPLSQVWTGYCQPGA*GEALLLEPQAYCAF Trigger: AAAAGCACAGTAAGCCTGAGGCTCCAAGAGCAAGGCCTCACCTCAGGCTCCTGGCTGGCAGTATCCGGTCCATACCTGTGACAGCGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR TCA 90 bp | TGTCCGCGTGTCATGCTCCAAGAAGGGTGGAGAACAAGCAAAAAGTaGTGGCGAGCAATGCTTGGCACCCTGCTGAGCCCCGGCCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: CPRVMLQEGWRTSKK*WRAMLGTLLSPGLH Trigger: ATGGAGGCCGGGGCTCAGCAGGGTGCCAAGCATTGCTCGCCATCACTTTTTGCTTGTTCTCCACCCTTCTTGGAGCATGACACGCGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR GCA 90 bp | CGGGCAGCGGTGAGGCTGGAGATGGCTAAGAACAAGGGACTTGCATaGACACACCTGGTAGAGCTATCTGATGCCCACTCTTCCCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: RAAVRLEMAKNKGLA*THLVELSDAHSSLS Trigger: GGAGAGGGAAGAGTGGGCATCAGATAGCTCTACCAGGTGTGTGCATGCAAGTCCCTTGTTCTTAGCCATCTCCAGCCTCACCGCTGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR CCA 90 bp | GAGCCCCAGCCCAGACCATCATCCTCAATAGTGAAGAGGAGACACTaGCCACACTACACAGTAAGCTACTCCTGGGCCATGCAGTGGACC | + |
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Preference number: 1 (lower is better) Translates to: EPQPRPSSSIVKRRH*PHYTVSYSWAMQWT Trigger: GGTCCACTGCATGGCCCAGGAGTAGCTTACTGTGTAGTGTGGCCAGTGTCTCCTCTTCACTATTGAGGATGATGGTCTGGGCTGGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR TCA 90 bp | GCTGCAGCATCAGGGCATCGAGTACGACGTCATTACCCTCTCGGATaGCTGAGCCTCAAAGGCCCAACGCTGACTGATCGTGGATATCAG | + |
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Preference number: 1 (lower is better) Translates to: AAASGHRVRRHYPLG*LSLKGPTLTDRGYQ Trigger: CTGATATCCACGATCAGTCAGCGTTGGGCCTTTGAGGCTCAGTCATCCGAGAGGGTAATGACGTCGTACTCGATGCCCTGATGCTGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR TCA 90 bp | AGGGTCCCTGGGAGCCCAGGCAGAGCTGGGGTAGTGAAGCTTCCGTaGTGGCTCGTCTTACTGGCTTCTTTCTCTAGATCCAGTATGTAC | + |
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Preference number: 1 (lower is better) Translates to: RVPGSPGRAGVVKLP*WLVLLASFSRSSMY Trigger: GTACATACTGGATCTAGAGAAAGAAGCCAGTAAGACGAGCCATCACGGAAGCTTCACTACCCCAGCTCTGCCTGGGCTCCCAGGGACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR GCA 90 bp | GGAGGGCATGAAGAAACAGGACAGCTTCTGATGCGTTTCTTGTGCTaGTTCCACTTGCCAGAGGGGTTCCAGCTTCCAGCTCCAACCCAG | + |
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Preference number: 1 (lower is better) Translates to: GGHEETGQLLMRFLC*FHLPEGFQLPAPTQ Trigger: CTGGGTTGGAGCTGGAAGCTGGAACCCCTCTGGCAAGTGGAAGCAGCACAAGAAACGCATCAGAAGCTGTCCTGTTTCTTCATGCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR GCA 90 bp | CTGTCTCCAGGGTCTCAGAGGGCAGGTAGTATATACCCTGAAGCCTaGAGTGCCTCGAAGGCAACACTTCCTCCTGAGCAGATGGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: LSPGSQRAGSIYPEA*SASKATLPPEQMEN Trigger: GTTTTCCATCTGCTCAGGAGGAAGTGTTGCCTTCGAGGCACTGCAGGCTTCAGGGTATATACTACCTGCCCTCTGAGACCCTGGAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR TCA 90 bp | TTCCTATCTCTAGGTCCAGGAAGGCCAGATCACACACATCCAGTATaGGCAAGGTACTCCATTCCTGCAGGAGTCCCAGGTAGGGTCCCT | + |
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Preference number: 1 (lower is better) Translates to: FLSLGPGRPDHTHPV*ARYSIPAGVPGRVP Trigger: AGGGACCCTACCTGGGACTCCTGCAGGAATGGAGTACCTTGCTCATACTGGATGTGTGTGATCTGGCCTTCCTGGACCTAGAGATAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR GCA 90 bp | ATCTGGGCAGGCTCAGCTGTAGGACTCTGGACTCCTCCATCCTACTaGGCTCAGGTAGACGCCTCTAAGGATTCAGTACTAAAAGGACCT | + |
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Preference number: 1 (lower is better) Translates to: IWAGSAVGLWTPPSY*AQVDASKDSVLKGP Trigger: AGGTCCTTTTAGTACTGAATCCTTAGAGGCGTCTACCTGAGCGCAGTAGGATGGAGGAGTCCAGAGTCCTACAGCTGAGCCTGCCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR CCA 90 bp | AGACACTGGCCACACTACACAGTAAGCTACTCCTGGGCCATGCAGTaGACCATTTGGGTCCAAAGACTAGCAACAAAGGAACCCCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: RHWPHYTVSYSWAMQ*TIWVQRLATKEPQG Trigger: TCCCTGGGGTTCCTTTGTTGCTAGTCTTTGGACCCAAATGGTCCACTGCATGGCCCAGGAGTAGCTTACTGTGTAGTGTGGCCAGTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR TCA 90 bp | ATTATCTCTACCCTGTTTAGGCTCACATGGCACAGCACTCAAGCCTaGGGCCCCACCAGTGCAATCAGTGTAGCTTCGCCTCCAAGAACA | + |
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Preference number: 1 (lower is better) Translates to: IISTLFRLTWHSTQA*GPTSAISVASPPRT Trigger: TGTTCTTGGAGGCGAAGCTACACTGATTGCACTGGTGGGGCCTCAGGCTTGAGTGCTGTGCCATGTGAGCCTAAACAGGGTAGAGATAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR CCA 90 bp | CCCTTGACAGGAGGAAGCTACCTACATCCAGGAAATCACAGCAGATaGCCAGACAGTACAGCATCTGGTGACCTCAGACAACCAGGTAAC | + |
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Preference number: 1 (lower is better) Translates to: PLTGGSYLHPGNHSR*PDSTASGDLRQPGN Trigger: GTTACCTGGTTGTCTGAGGTCACCAGATGCTGTACTGTCTGGCCATCTGCTGTGATTTCCTGGATGTAGGTAGCTTCCTCCTGTCAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR CCA 90 bp | ATAGTGAAGAGGAGACACTGGCCACACTACACAGTAAGCTACTCCTaGGCCATGCAGTGGACCATTTGGGTCCAAAGACTAGCAACAAAG | + |
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Preference number: 1 (lower is better) Translates to: IVKRRHWPHYTVSYS*AMQWTIWVQRLATK Trigger: CTTTGTTGCTAGTCTTTGGACCCAAATGGTCCACTGCATGGCCCAGGAGTAGCTTACTGTGTAGTGTGGCCAGTGTCTCCTCTTCACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR GCA 90 bp | GACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGCCCTTaGAACTCTCTTTGTATATGTGCTAATAACCTGAACCAGGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: DPLAPVSIKGPESSP*NSLCICANNLNQVR Trigger: CCTTACCTGGTTCAGGTTATTAGCACATATACAAAGAGAGTTGCAAGGGCTGGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR GCA 90 bp | ATGGGAGAAAGACTGGGACTTCTACAGCCCGAGCCCCAGCCCAGACCATCATCCGCACTGAGGAGGCAGTaGCGGAGCAGATCCACCAGC | + |
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Preference number: 2 (lower is better) Translates to: MGERLGLLQPEPQPRPSSALRRQ*RSRSTS Trigger: GCTGGTGGATCTGCTCCGGCACTGCCTCCTCAGTGC...GGATGATGGTCTGGGCTGGGGCTCGGGCTGTAGAAGTCCCAGTCTTTCTCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR TCA 90 bp | ATGGGAGAAAGACTGGGACTTCTACAGCCCGAGCCCCAGCCCAGACCATCATCCGTGAATCGGAAAGGGTaGGAGCAGGGAGGGGGATCC | + |
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Preference number: 2 (lower is better) Translates to: MGERLGLLQPEPQPRPSSVNRKG*EQGGGS Trigger: GGATCCCCCTCCCTGCTCTCACCCTTTCCGATTCAC...GGATGATGGTCTGGGCTGGGGCTCGGGCTGTAGAAGTCCCAGTCTTTCTCCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR GCA 90 bp | ATGGGAGAAAGACTGGGACTTCTACAGCCCGAGCCCCAGCCCAGACCATCATCCGCCTCAGGCTTACTGTaGTTTTCCCTCCCCGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: MGERLGLLQPEPQPRPSSASGLL*FSLPGS Trigger: GCTGCCGGGGAGGGAAAAGCACAGTAAGCCTGAGGC...GGATGATGGTCTGGGCTGGGGCTCGGGCTGTAGAAGTCCCAGTCTTTCTCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR CCA 90 bp | AGACCCAGTAAAGCTGGGCTGAGCCCTAGCATGCAGAAGGTCCCTCCCCAGCATAGGGGCCGGCTCTCCTaGAGACTAGGGAGTTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: RPSKAGLSPSMQKVPPQHRGRLS*RLGSFL Trigger: CAGGAAACTCCCTAGTCTCCAGGAGAGCCGGCCCCT...ATGCTGGGGAGGGACCTTCTGCATGCTAGGGCTCAGCCCAGCTTTACTGGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGGAGAAAGACTGGGACTTCTACAGCCCGAGCCCCAGCCCAGACCATCATCCCCAGTCACGGGGTTCTaGGTACAGAGCGGCTACAGC | + |
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Preference number: 2 (lower is better) Translates to: MGERLGLLQPEPQPRPSSPVTGF*VQSGYS Trigger: GCTGTAGCCGCTCTGTACCCAGAACCCCGTGACTGG...GGATGATGGTCTGGGCTGGGGCTCGGGCTGTAGAAGTCCCAGTCTTTCTCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR CAA 90 bp | TCTTTCTCTAGATCCAGTATGTACCTGTCTCCCCCAGCCAGCAGCTaGTCACCCAGGCTCAGCTGGAAGCTGCCGCACACTCCGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: SFSRSSMYLSPPASS*SPRLSWKLPHTPLS Trigger: TGACAGCGGAGTGTGCGGCAGCTTCCAGCTGAGCCTGGGTGACAAGCTGCTGGCTGGGGGAGACAGGTACATACTGGATCTAGAGAAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAGGCACTGAGCCAAGAACACATCATTGTGGCCCAGGAACAGACAGTGACGCTCCAGCCAGGACATaGTGGGTGCCTCAGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: TAGTEPRTHHCGPGTDSDAPART*WVPQPA Trigger: AGCAGGCTGAGGCACCCAGCATGTCCTGGCTGGAGC...GTCACTGTCTGTTCCTGGGCCACAATGATGTGTTCTTGGCTCAGTGCCTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR GCA 90 bp | ATTCTCATGCCACGTCTGCGGGCAGCGGTGAGGCTGGAGATGGCTAAGAACAAGGCTACTCCTGGGCCATaGAGTGGACCATTTGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: ILMPRLRAAVRLEMAKNKATPGP*SGPFGS Trigger: GGACCCAAATGGTCCACTGCATGGCCCAGGAGTAGC...CTTGTTCTTAGCCATCTCCAGCCTCACCGCTGCCCGCAGACGTGGCATGAGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCAAGAACAAGAAGGATCTGAGGCGGCACATGCTAACGCACACCAACGAGAACCAGCTCCCACTGAGTaGAGCCCCAGCAGCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LQEQEGSEAAHANAHQREPAPTE*SPSSCL Trigger: GAGGCAGCTGCTGGGGCTCCACTCAGTGGGAGCTGG...TTCTCGTTGGTGTGCGTTAGCATGTGCCGCCTCAGATCCTTCTTGTTCTTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR TCA 90 bp | GTTTTGATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGCCCTAGTCCTAGCAGTCTGTaGCAGCACCCCTGGAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: VLMDPLAPVSIKGPESSPSPSSL*QHPWSS Trigger: GGAGCTCCAGGGGTGCTGTCACAGACTGCTAGGACT...AGGGCTGGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCATCAAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR TCA 90 bp | TATGATAGACCAATTCCTATCTGGTCCATGCTTCTGGTCCTCACTGACATGGGTCCCGGCAGCGGTGGCTaGTGCTGCCATGGCCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: YDRPIPIWSMLLVLTDMGPGSGG*CCHGPS Trigger: GCTTGGGCCATGGCAGCATCAGCCACCGCTGCCGGG...ACCCATGTCAGTGAGGACCAGAAGCATGGACCAGATAGGAATTGGTCTATCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR CCA 90 bp | TCCAAGAACAAGAAGGATCTGAGGCGGCACATGCTAACGCACACCAACGAGAAGATGGCGAGCAATGCTTaGCACCCTGCTGAGCCCCGG | + |
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Preference number: 2 (lower is better) Translates to: SKNKKDLRRHMLTHTNEKMASNA*HPAEPR Trigger: CCGGGGCTCAGCAGGGTGCCAAGCATTGCTCGCCAT...CTTCTCGTTGGTGTGCGTTAGCATGTGCCGCCTCAGATCCTTCTTGTTCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR CAA 90 bp | TCTGGTGACCTCAGACAACCAGGTAACCTCCTGTCCCTGAGGCCATaGTCCATAGCTGTGTCTTCTACTCTGCCCTTACCCAGCTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: SGDLRQPGNLLSLRP*SIAVSSTLPLPSSH Trigger: GTGGGAGCTGGGTAAGGGCAGAGTAGAAGACACAGCTATGGACAATGGCCTCAGGGACAGGAGGTTACCTGGTTGTCTGAGGTCACCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR CAA 90 bp | GAAGAAACAGGACAGCTTCTGATGCGTTTCTTGTGCTGCTTCCACTaGCCAGAGGGGTTCCAGCTTCCAGCTCCAACCCAGTGCTGCGTC | + |
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Preference number: 2 (lower is better) Translates to: EETGQLLMRFLCCFH*PEGFQLPAPTQCCV Trigger: GACGCAGCACTGGGTTGGAGCTGGAAGCTGGAACCCCTCTGGCAAGTGGAAGCAGCACAAGAAACGCATCAGAAGCTGTCCTGTTTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR TCA 90 bp | ATGGGAGAAAGACTGGGACTTCTACAGCCCGAGCCCCAGCCCAGACCATCATCCGGCAACACTTCCTCCTaGGCAGATGGAAAACATCAG | + |
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Preference number: 2 (lower is better) Translates to: MGERLGLLQPEPQPRPSSGNTSS*ADGKHQ Trigger: CTGATGTTTTCCATCTGCTCAGGAGGAAGTGTTGCC...GGATGATGGTCTGGGCTGGGGCTCGGGCTGTAGAAGTCCCAGTCTTTCTCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGGTCCTCACTGACATGGGTTTAGTTTCCTTCCATGCTGACCCACTGGTGGAGGTCTGCGGACCCTaGAGAAAGGGTGGGACAGAC | + |
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Preference number: 2 (lower is better) Translates to: LLVLTDMGLVSFHADPLVEVCGP*RKGGTD Trigger: GTCTGTCCCACCCTTTCTTCAGGGTCCGCAGACCTC...CACCAGTGGGTCAGCATGGAAGGAAACTAAACCCATGTCAGTGAGGACCAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR GCA 90 bp | ACGGGCACCTCAAATTCCACATCCAGCGGCTACATAGCATTGATGGGAGAAAGACTGGGTGCCTCAGCCTaGTGGCAGGCTTTGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: TGTSNSTSSGYIALMGERLGASA*WQALGE Trigger: CTCTCCCAAAGCCTGCCAGCAGGCTGAGGCACCCAG...TCTTTCTCCCATCAATGCTATGTAGCCGCTGGATGTGGAATTTGAGGTGCCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR TCA 90 bp | AGACCCAGTAAAGCTGGGCTGAGCCCTAGCATGCAGAAGGTCCCTCCCCAGCATAGTTTCCTTCCATGCTaGCCCACTGGTGCATTATCT | + |
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Preference number: 2 (lower is better) Translates to: RPSKAGLSPSMQKVPPQHSFLPC*PTGALS Trigger: AGATAATGCACCAGTGGGTCAGCATGGAAGGAAACT...ATGCTGGGGAGGGACCTTCTGCATGCTAGGGCTCAGCCCAGCTTTACTGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR GCA 90 bp | TATGATAGACCAATTCCTATCTGGTCCATGCTTCTGGTCCTCACTGACATGGGTCAGCTCAAGTCCTGCTaGCACCCCAGGGGAGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: YDRPIPIWSMLLVLTDMGQLKSC*HPRGEP Trigger: GGGCTCTCCCCTGGGGTGGCAGCAGGACTTGAGCTG...ACCCATGTCAGTGAGGACCAGAAGCATGGACCAGATAGGAATTGGTCTATCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGGTCCTCACTGACATGGGTTTAGTTTCCTTCCATGCTGACCCACTGGTGGGTGCCTCAGCCTGCTaGCAGGCTTTGGGAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LLVLTDMGLVSFHADPLVGASAC*QALGEK Trigger: TTTCTCTCCCAAAGCCTGCCAGCAGGCTGAGGCACC...CACCAGTGGGTCAGCATGGAAGGAAACTAAACCCATGTCAGTGAGGACCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR CCA 90 bp | AGACCCAGTAAAGCTGGGCTGAGCCCTAGCATGCAGAAGGTCCCTCCCCAGCATTATCATCTCTCAGGATaGTGTCCAGCACTTACTGCC | + |
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Preference number: 2 (lower is better) Translates to: RPSKAGLSPSMQKVPPQHYHLSG*CPALTA Trigger: GGCAGTAAGTGCTGGACACCATCCTGAGAGATGATA...ATGCTGGGGAGGGACCTTCTGCATGCTAGGGCTCAGCCCAGCTTTACTGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR CCA 90 bp | ATTCTCATGCCACGTCTGCGGGCAGCGGTGAGGCTGGAGATGGCTAAGAACAAGGTGAAGAGGAGACACTaGCCACACTACACAGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: ILMPRLRAAVRLEMAKNKVKRRH*PHYTVS Trigger: GCTTACTGTGTAGTGTGGCCAGTGTCTCCTCTTCAC...CTTGTTCTTAGCCATCTCCAGCCTCACCGCTGCCCGCAGACGTGGCATGAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR CCA 90 bp | ACGGGCACCTCAAATTCCACATCCAGCGGCTACATAGCATTGATGGGAGAAAGACAAGTAGAGGCTACCTaGCTCCACAGCCAGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: TGTSNSTSSGYIALMGERQVEAT*LHSQLA Trigger: AGCCAGCTGGCTGTGGAGCCAGGTAGCCTCTACTTG...TCTTTCTCCCATCAATGCTATGTAGCCGCTGGATGTGGAATTTGAGGTGCCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGGAGAAAGACTGGGACTTCTACAGCCCGAGCCCCAGCCCAGACCATCATCCGATGGCTCGTCTTACTaGCTTCTTTCTCTAGATCCA | + |
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Preference number: 2 (lower is better) Translates to: MGERLGLLQPEPQPRPSSDGSSY*LLSLDP Trigger: TGGATCTAGAGAAAGAAGCCAGTAAGACGAGCCATC...GGATGATGGTCTGGGCTGGGGCTCGGGCTGTAGAAGTCCCAGTCTTTCTCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR CCA 90 bp | CACAGTTTCAACAGGAACGGGCACCTCAAATTCCACATCCAGCGGCTACATAGCGCCTCCATGCCAGGTTaGGGCACACAGAACTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: HSFNRNGHLKFHIQRLHSASMPG*GTQNSK Trigger: TTTGGAGTTCTGTGTGCCCCAACCTGGCATGGAGGC...GCTATGTAGCCGCTGGATGTGGAATTTGAGGTGCCCGTTCCTGTTGAAACTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR CCA 90 bp | AGACCCAGTAAAGCTGGGCTGAGCCCTAGCATGCAGAAGGTCCCTCCCCAGCATATGCAGTGGACCATTTaGGTCCAAAGACTAGCAACA | + |
|
Preference number: 2 (lower is better) Translates to: RPSKAGLSPSMQKVPPQHMQWTI*VQRLAT Trigger: TGTTGCTAGTCTTTGGACCCAAATGGTCCACTGCAT...ATGCTGGGGAGGGACCTTCTGCATGCTAGGGCTCAGCCCAGCTTTACTGGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR-3UTR TCA 90 bp | CTCCAAGAACAAGAAGGATCTGAGGCGGCACATGCTAACGCACACCAACGAGAAGTACGTTGTGGTCCCTaGTGGCCATCATATCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: LQEQEGSEAAHANAHQREVRCGP*WPSYPG Trigger: ACCTGGATATGATGGCCATCAGGGACCACAACGTAC...TTCTCGTTGGTGTGCGTTAGCATGTGCCGCCTCAGATCCTTCTTGTTCTTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR-3UTR TCA 90 bp | CACAGTTTCAACAGGAACGGGCACCTCAAATTCCACATCCAGCGGCTACATAGCAGCTCGGTAAAGAACTaGGGCTACTCCTCCCTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: HSFNRNGHLKFHIQRLHSSSVKN*GYSSLD Trigger: GTCAAGGGAGGAGTAGCCTCAGTTCTTTACCGAGCT...GCTATGTAGCCGCTGGATGTGGAATTTGAGGTGCCCGTTCCTGTTGAAACTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR-3UTR TCA 90 bp | TATGATAGACCAATTCCTATCTGGTCCATGCTTCTGGTCCTCACTGACATGGGTCACAGCACTCAAGCCTaGGGCCCCACCAGTGCAATC | + |
|
Preference number: 2 (lower is better) Translates to: YDRPIPIWSMLLVLTDMGHSTQA*GPTSAI Trigger: GATTGCACTGGTGGGGCCTCAGGCTTGAGTGCTGTG...ACCCATGTCAGTGAGGACCAGAAGCATGGACCAGATAGGAATTGGTCTATCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR CCA 90 bp | TATGATAGACCAATTCCTATCTGGTCCATGCTTCTGGTCCTCACTGACATGGGTACCCTGCTTCCTCCATaGGCTCCCTGTCTCCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: YDRPIPIWSMLLVLTDMGTLLPP*APCLQG Trigger: ACCCTGGAGACAGGGAGCCCATGGAGGAAGCAGGGT...ACCCATGTCAGTGAGGACCAGAAGCATGGACCAGATAGGAATTGGTCTATCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR-3UTR GCA 90 bp | CACAGTTTCAACAGGAACGGGCACCTCAAATTCCACATCCAGCGGCTACATAGCGGTTTGGAGGAAGGCTaGAACCTTACAGGATCACTG | + |
|
Preference number: 2 (lower is better) Translates to: HSFNRNGHLKFHIQRLHSGLEEG*NLTGSL Trigger: CAGTGATCCTGTAAGGTTGCAGCCTTCCTCCAAACC...GCTATGTAGCCGCTGGATGTGGAATTTGAGGTGCCCGTTCCTGTTGAAACTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR CAA 90 bp | GCCTCAGCCTGCTGGCAGGCTTTGGGAGAGAAATTTATTTTTGTTTaGATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: ASACWQALGEKFIFV*MDPLAPVSIKGPES Trigger: GGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCATCAAAACAAAAATAAATTTCTCTCCCAAAGCCTGCCAGCAGGCTGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR CCA 90 bp | TATGATAGACCAATTCCTATCTGGTCCATGCTTCTGGTCCTCACTGACATGGGTGTGAGGCCTTGCTCTTaGAGCCTCAGGCTTACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: YDRPIPIWSMLLVLTDMGVRPCS*SLRLTV Trigger: CACAGTAAGCCTGAGGCTCCAAGAGCAAGGCCTCAC...ACCCATGTCAGTGAGGACCAGAAGCATGGACCAGATAGGAATTGGTCTATCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR-3UTR CCA 90 bp | TCATCCTCAATAGTGAAGAGGAGACACTGGCCACACTACACAGTAAGCTACTCCTTCCTCCTGAGCAGATaGAAAACATCAGCCAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SSSIVKRRHWPHYTVSYSFLLSR*KTSASL Trigger: CAGGCTGGCTGATGTTTTCCATCTGCTCAGGAGGAA...GGAGTAGCTTACTGTGTAGTGTGGCCAGTGTCTCCTCTTCACTATTGAGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR-3UTR TCA 90 bp | ATTTTTGTTTTGATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCACCTGTGGATGGATTTaGAGGCCTGGGTACCTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: IFVLMDPLAPVSIKGPESTCGWI*RPGYLD Trigger: ATCAAGGTACCCAGGCCTTCAAATCCATCCACAGGT...GGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCATCAAAACAAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR-3UTR TCA 90 bp | ACAGCAGGCACTGAGCCAAGAACACATCATTGTGGCCCAGGAACAGACAGTGACAATTTATTTTTGTTTTaGTGGACCCACTGGCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: TAGTEPRTHHCGPGTDSDNLFLF*WTHWLL Trigger: CAGGAGCCAGTGGGTCCATCAAAACAAAAATAAATT...GTCACTGTCTGTTCCTGGGCCACAATGATGTGTTCTTGGCTCAGTGCCTGCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR-3UTR CCA 90 bp | TATGATAGACCAATTCCTATCTGGTCCATGCTTCTGGTCCTCACTGACATGGGTATATTCCTATGTCCCTaGCAGCTCAAGTCCTGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: YDRPIPIWSMLLVLTDMGIFLCP*QLKSCC Trigger: GCAGCAGGACTTGAGCTGCCAGGGACATAGGAATAT...ACCCATGTCAGTGAGGACCAGAAGCATGGACCAGATAGGAATTGGTCTATCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTGGTCCTCACTGACATGGGTTTAGTTTCCTTCCATGCTGACCCACTGGTGATTTCCTTTTACAAATaGAACAAGGCAGCAACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LLVLTDMGLVSFHADPLVISFYK*NKAATG Trigger: CCCTGTTGCTGCCTTGTTTCATTTGTAAAAGGAAAT...CACCAGTGGGTCAGCATGGAAGGAAACTAAACCCATGTCAGTGAGGACCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR CCA 90 bp | TCATCCTCAATAGTGAAGAGGAGACACTGGCCACACTACACAGTAAGCTACTCCACCCTCACACACTCTTaGGGAGTTTCTGTATTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SSSIVKRRHWPHYTVSYSTLTHS*GVSVFP Trigger: AGGAAATACAGAAACTCCCCAAGAGTGTGTGAGGGT...GGAGTAGCTTACTGTGTAGTGTGGCCAGTGTCTCCTCTTCACTATTGAGGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR CCA 72 bp | TCTCCCCCAGCCAGCAGCTTGTCACCCAGGCTCAGCTaGAAGCTGCCGCACACTCCGCTGTCACAGGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: SPPASSLSPRLS*KLPHTPLSQVW Trigger: CCATACCTGTGACAGCGGAGTGTGCGGCAGCTTCCAGCTGAGCCTGGGTGACAAGCTGCTGGCTGGGGGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGAGAAAGACTGGGACTTCTACAGCCCGAGCCCCAGCCCAGACCATCATCCCCCCCAGCCAGCAGCTaGTCACCCAGGCTCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: MGERLGLLQPEPQPRPSSPPASS*SPRLSW Trigger: CCAGCTGAGCCTGGGTGACAAGCTGCTGGCTGGGGG...GGATGATGGTCTGGGCTGGGGCTCGGGCTGTAGAAGTCCCAGTCTTTCTCCCAT 63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR TCA 72 bp | GGTATGGACCGGATACTGCCAGCCAGGAGCCTGAGGTaGGGCCTTGCTCTTGGAGCCTCAGGCTTACTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GMDRILPARSLR*GLALGASGLLC Trigger: GCACAGTAAGCCTGAGGCTCCAAGAGCAAGGCCTCACCTCAGGCTCCTGGCTGGCAGTATCCGGTCCATACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR CCA 72 bp | AGCCTGGAAGTCTGGTGTAGGCGGGCTGGAGGTATCTaGGCAGGCTCAGCTGTAGGACTCTGGACTCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLEVWCRRAGGI*AGSAVGLWTPP Trigger: TGGAGGAGTCCAGAGTCCTACAGCTGAGCCTGCCCAGATACCTCCAGCCCGCCTACACCAGACTTCCAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR CCA 72 bp | AGCTCCAACCCAGTGCTGCGTCTTCTGAGCTCTGTATaGGACCAGGGCCTAGAGCCCTGCTCTCCAGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SSNPVLRLLSSV*DQGLEPCSPVG Trigger: TCCCACTGGAGAGCAGGGCTCTAGGCCCTGGTCCCATACAGAGCTCAGAAGACGCAGCACTGGGTTGGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR TCA 72 bp | TCTCGGATGACTGAGCCTCAAAGGCCCAACGCTGACTaGTCGTGGATATCAGGGGCCGGCTCTCCTGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SRMTEPQRPNAD*SWISGAGSPGD Trigger: GTCTCCAGGAGAGCCGGCCCCTGATATCCACGATCAGTCAGCGTTGGGCCTTTGAGGCTCAGTCATCCGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR TCA 72 bp | TCACAGGTATGGACCGGATACTGCCAGCCAGGAGCCTaGGGTGAGGCCTTGCTCTTGGAGCCTCAGGCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SQVWTGYCQPGA*GEALLLEPQAY Trigger: GTAAGCCTGAGGCTCCAAGAGCAAGGCCTCACCTCAGGCTCCTGGCTGGCAGTATCCGGTCCATACCTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR TCA 72 bp | CCAGCACTTACTGCCTCAGGAGTACGTTGTGGTCCCTaGTGGCCATCATATCCAGGTAGGCCAGGCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PALTASGVRCGP*WPSYPGRPGLG Trigger: CCCCAGGCCTGGCCTACCTGGATATGATGGCCATCAGGGACCACAACGTACTCCTGAGGCAGTAAGTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR-3UTR CAA 90 bp | AGACCCAGTAAAGCTGGGCTGAGCCCTAGCATGCAGAAGGTCCCTCCCCAGCATTGCCTCAGGAGTACGTaGTGGTCCCTGATGGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: RPSKAGLSPSMQKVPPQHCLRST*WSLMAI Trigger: GATGGCCATCAGGGACCACAACGTACTCCTGAGGCA...ATGCTGGGGAGGGACCTTCTGCATGCTAGGGCTCAGCCCAGCTTTACTGGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR CCA 72 bp | CTGAGCAGATGGAAAACATCAGCCAGCCTGGAAGTCTaGTGTAGGCGGGCTGGAGGTATCTGGGCAGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LSRWKTSASLEV*CRRAGGIWAGS Trigger: TGAGCCTGCCCAGATACCTCCAGCCCGCCTACACCAGACTTCCAGGCTGGCTGATGTTTTCCATCTGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR CCA 72 bp | GTGGAGAACAAGCAAAAAGTGATGGCGAGCAATGCTTaGCACCCTGCTGAGCCCCGGCCTCCATGCCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VENKQKVMASNA*HPAEPRPPCQV Trigger: AACCTGGCATGGAGGCCGGGGCTCAGCAGGGTGCCAAGCATTGCTCGCCATCACTTTTTGCTTGTTCTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR CAA 90 bp | ACAGCAGGCACTGAGCCAAGAACACATCATTGTGGCCCAGGAACAGACAGTGACGGCCTCCATGCCAGGTaGGGGCACACAGAACTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TAGTEPRTHHCGPGTDSDGLHAR*GHTELQ Trigger: TTGGAGTTCTGTGTGCCCCAACCTGGCATGGAGGCC...GTCACTGTCTGTTCCTGGGCCACAATGATGTGTTCTTGGCTCAGTGCCTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR TCA 72 bp | AGTACAGGCCAAGCCAGCTTCATCTCAGGAGAGAGCTaGGCTAGTGAGAACCCTGCTTCCTCCATGGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: STGQASFISGES*ASENPASSMGS Trigger: GGAGCCCATGGAGGAAGCAGGGTTCTCACTAGCTCAGCTCTCTCCTGAGATGAAGCTGGCTTGGCCTGTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR TCA 72 bp | CTACCTGGCTCCACAGCCAGCTGGCTCTACCTTGTATaGACAGCGGTTGCAGTACAGGCCAAGCCAGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LPGSTASWLYLV*TAVAVQAKPAS Trigger: TGAAGCTGGCTTGGCCTGTACTGCAACCGCTGTTCATACAAGGTAGAGCCAGCTGGCTGTGGAGCCAGGTAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR TCA 72 bp | GGGAGCCCAGGCAGAGCTGGGGTAGTGAAGCTTCCGTaGTGGCTCGTCTTACTGGCTTCTTTCTCTAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: GSPGRAGVVKLP*WLVLLASFSRS Trigger: GGATCTAGAGAAAGAAGCCAGTAAGACGAGCCATCACGGAAGCTTCACTACCCCAGCTCTGCCTGGGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR TCA 72 bp | ACGGGGTTCTGGGTACAGAGCGGCTACAGCAGGCACTaGGCCAAGAACACATCATTGTGGCCCAGGAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: TGFWVQSGYSRH*AKNTSLWPRNR Trigger: TCTGTTCCTGGGCCACAATGATGTGTTCTTGGCTCAGTGCCTGCTGTAGCCGCTCTGTACCCAGAACCCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR-3UTR CAA 90 bp | ATTCTCATGCCACGTCTGCGGGCAGCGGTGAGGCTGGAGATGGCTAAGAACAAGGCCAAGAACACATCATaGTGGCCCAGGAACAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: ILMPRLRAAVRLEMAKNKAKNTS*WPRNRQ Trigger: CTGTCTGTTCCTGGGCCACAATGATGTGTTCTTGGC...CTTGTTCTTAGCCATCTCCAGCCTCACCGCTGCCCGCAGACGTGGCATGAGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR TCA 72 bp | TCAGGGCATCGAGTACGACGTCATTACCCTCTCGGATaGCTGAGCCTCAAAGGCCCAACGCTGACTGATCGT | + |
|
Preference number: 3 (lower is better) Translates to: SGHRVRRHYPLG*LSLKGPTLTDR Trigger: ACGATCAGTCAGCGTTGGGCCTTTGAGGCTCAGTCATCCGAGAGGGTAATGACGTCGTACTCGATGCCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| 3UTR TCA 72 bp | GTCATGCTCCAAGAAGGGTGGAGAACAAGCAAAAAGTaGTGGCGAGCAATGCTTGGCACCCTGCTGAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VMLQEGWRTSKK*WRAMLGTLLSP Trigger: GGGGCTCAGCAGGGTGCCAAGCATTGCTCGCCATCACTTTTTGCTTGTTCTCCACCCTTCTTGGAGCATGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR GCA 72 bp | CACAGCCAGCTGGCTCTACCTTGTATGAACAGCGGTTaGAGTACAGGCCAAGCCAGCTTCATCTCAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: HSQLALPCMNSG*STGQASFISGE Trigger: CTCTCCTGAGATGAAGCTGGCTTGGCCTGTACTGCAACCGCTGTTCATACAAGGTAGAGCCAGCTGGCTGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR CCA 72 bp | GAAACCAGGCAGAGGTCCCAACAAGTAGAGGCTACCTaGCTCCACAGCCAGCTGGCTCTACCTTGTATGAAC | + |
|
Preference number: 3 (lower is better) Translates to: ETRQRSQQVEAT*LHSQLALPCMN Trigger: GTTCATACAAGGTAGAGCCAGCTGGCTGTGGAGCCAGGTAGCCTCTACTTGTTGGGACCTCTGCCTGGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAAGAACAAGAAGGATCTGAGGCGGCACATGCTAACGCACACCAACGAGAAGGTGAGGCCTTGCTCTaGGAGCCTCAGGCTTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: LQEQEGSEAAHANAHQREGEALL*EPQAYC Trigger: ACAGTAAGCCTGAGGCTCCAAGAGCAAGGCCTCACC...TTCTCGTTGGTGTGCGTTAGCATGTGCCGCCTCAGATCCTTCTTGTTCTTGGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR TCA 72 bp | CCAGTGAGGGAGGGCATGAAGAAACAGGACAGCTTCTaGTGCGTTTCTTGTGCTGCTTCCACTTGCCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PVREGMKKQDSF*CVSCAASTCQR Trigger: CCTCTGGCAAGTGGAAGCAGCACAAGAAACGCATCAGAAGCTGTCCTGTTTCTTCATGCCCTCCCTCACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR GCA 72 bp | GGCTCAGCTGTAGGACTCTGGACTCCTCCATCCTACTaGGCTCAGGTAGACGCCTCTAAGGATTCAGTACTA | + |
|
Preference number: 3 (lower is better) Translates to: GSAVGLWTPPSY*AQVDASKDSVL Trigger: TAGTACTGAATCCTTAGAGGCGTCTACCTGAGCGCAGTAGGATGGAGGAGTCCAGAGTCCTACAGCTGAGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR CCA 72 bp | TTACAAATGAAACAAGGCAGCAACAGGGTCTGGGGCTaGGGAGGCACGGGCCTATTTACAAGGGACTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LQMKQGSNRVWG*GGTGLFTRDLV Trigger: CACCAAGTCCCTTGTAAATAGGCCCGTGCCTCCCCAGCCCCAGACCCTGTTGCTGCCTTGTTTCATTTGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR GCA 72 bp | GTGAGGCTGGAGATGGCTAAGAACAAGGGACTTGCATaGACACACCTGGTAGAGCTATCTGATGCCCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: VRLEMAKNKGLA*THLVELSDAHS Trigger: AGAGTGGGCATCAGATAGCTCTACCAGGTGTGTGCATGCAAGTCCCTTGTTCTTAGCCATCTCCAGCCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR CCA 72 bp | GGCTCCAGCCAGGACATGCTGGGTGCCTCAGCCTGCTaGCAGGCTTTGGGAGAGAAATTTATTTTTGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GSSQDMLGASAC*QALGEKFIFVL Trigger: CAAAACAAAAATAAATTTCTCTCCCAAAGCCTGCCAGCAGGCTGAGGCACCCAGCATGTCCTGGCTGGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR CCA 72 bp | AGGAGACACTGGCCACACTACACAGTAAGCTACTCCTaGGCCATGCAGTGGACCATTTGGGTCCAAAGACTA | + |
|
Preference number: 3 (lower is better) Translates to: RRHWPHYTVSYS*AMQWTIWVQRL Trigger: TAGTCTTTGGACCCAAATGGTCCACTGCATGGCCCAGGAGTAGCTTACTGTGTAGTGTGGCCAGTGTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR CCA 72 bp | CCCAGACCATCATCCTCAATAGTGAAGAGGAGACACTaGCCACACTACACAGTAAGCTACTCCTGGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: PRPSSSIVKRRH*PHYTVSYSWAM Trigger: CATGGCCCAGGAGTAGCTTACTGTGTAGTGTGGCCAGTGTCTCCTCTTCACTATTGAGGATGATGGTCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCAGGCACTGAGCCAAGAACACATCATTGTGGCCCAGGAACAGACAGTGACACCAGAGTCCAGCCCTaGCAACTCTCTTTGTATATG | + |
|
Preference number: 3 (lower is better) Translates to: TAGTEPRTHHCGPGTDSDTRVQP*QLSLYM Trigger: CATATACAAAGAGAGTTGCAAGGGCTGGACTCTGGT...GTCACTGTCTGTTCCTGGGCCACAATGATGTGTTCTTGGCTCAGTGCCTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR TCA 72 bp | TATGAGCTCGGTAAAGAACTGAGGCTACTCCTCCCTTaGCAGGAGGAAGCTACCTACATCCAGGAAATCACA | + |
|
Preference number: 3 (lower is better) Translates to: YELGKELRLLLP*QEEATYIQEIT Trigger: TGTGATTTCCTGGATGTAGGTAGCTTCCTCCTGTCAAGGGAGGAGTAGCCTCAGTTCTTTACCGAGCTCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR GCA 72 bp | GCACAAGCACATAACAAGCTAGGTGTCCGCGTGTCATaGTCCAAGAAGGGTGGAGAACAAGCAAAAAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: AQAHNKLGVRVS*SKKGGEQAKSD Trigger: ATCACTTTTTGCTTGTTCTCCACCCTTCTTGGAGCATGACACGCGGACACCTAGCTTGTTATGTGCTTGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR CCA 72 bp | TCCCCTTCCTTAGGTTCAGTATATCATCTCTCAGGATaGTGTCCAGCACTTACTGCCTCAGGAGTACGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SPSLGSVYHLSG*CPALTASGVRC Trigger: ACAACGTACTCCTGAGGCAGTAAGTGCTGGACACCATCCTGAGAGATGATATACTGAACCTAAGGAAGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR-3UTR CAA 90 bp | TCATCCTCAATAGTGAAGAGGAGACACTGGCCACACTACACAGTAAGCTACTCCAAATTTATTTTTGTTTaGATGGACCCACTGGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SSSIVKRRHWPHYTVSYSKFIFV*MDPLAP Trigger: AGGAGCCAGTGGGTCCATCAAAACAAAAATAAATTT...GGAGTAGCTTACTGTGTAGTGTGGCCAGTGTCTCCTCTTCACTATTGAGGATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | GTCACCGAGGCAACCGCCCCAAGACCCTCACACACTCTTGGGGAGTTTCTGTATCTCCTGCAGCCGCTCTaGCGTCGGCCCCCACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTEATAPRPSHTLGEFLYLLQPL*RRPPLG Trigger: GCCAAGTGGGGGCCGACGCCAGAGCGGCTGCAGGAG...ATACAGAAACTCCCCAAGAGTGTGTGAGGGTCTTGGGGCGGTTGCCTCGGTGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGAAAGACTGGGACTTCTACAGCCCGAGCCCCAGCCCAGACCATCATCCGAAAGCACGTCGTGCTaGCCCAGCACGGGCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MGERLGLLQPEPQPRPSSESTSC*PSTGIS Trigger: GGAGATGCCCGTGCTGGGTCAGCACGACGTGCTTTC...GGATGATGGTCTGGGCTGGGGCTCGGGCTGTAGAAGTCCCAGTCTTTCTCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGAAAGACTGGGACTTCTACAGCCCGAGCCCCAGCCCAGACCATCATCCGCTTATAGGCAGCGGTaGGCTCCTGCAGCCGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MGERLGLLQPEPQPRPSSAYRQR*APAAAL Trigger: CAGAGCGGCTGCAGGAGCTCACCGCTGCCTATAAGC...GGATGATGGTCTGGGCTGGGGCTCGGGCTGTAGAAGTCCCAGTCTTTCTCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCTGCCGCACACTCCGCTGTCACAGGTATGGACCGGATACTGCCAGCCAAGGGCTGGCTCTGACTaGAGGTGCCTGGAGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: WKLPHTPLSQVWTGYCQPRAGSD*RCLESD Trigger: GTCACTCTCCAGGCACCTCCAGTCAGAGCCAGCCCT...TGGCTGGCAGTATCCGGTCCATACCTGTGACAGCGGAGTGTGCGGCAGCTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR TCA 90 bp | CAACAGGGTCTGGGGCTGGGGAGGCACGGGCCTATTTACAAGGGACTTGGTGAAAGGGGAACTGGGCACTaGCTGGCTTGTGGGTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QQGLGLGRHGPIYKGLGERGTGH*LACGCH Trigger: GTGACACCCACAAGCCAGTCAGTGCCCAGTTCCCCT...TTCACCAAGTCCCTTGTAAATAGGCCCGTGCCTCCCCAGCCCCAGACCCTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR TCA 90 bp | GCAGTGCCTCGAAGGCAACACTTCCTCCTGAGCAGATGGAAAACATCAGCCAGCGACATGCACTGGCAGTaGCCCCTGCAGGCCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AVPRRQHFLLSRWKTSASDMHWQ*PLQASP Trigger: GGGACTGGCCTGCAGGGGTCACTGCCAGTGCATGTC...GCTGGCTGATGTTTTCCATCTGCTCAGGAGGAAGTGTTGCCTTCGAGGCACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | ATGGGAGAAAGACTGGGACTTCTACAGCCCGAGCCCCAGCCCAGACCATCATCCCTCCTTCCCGGGGGCTaGCGTGATTCTCATTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MGERLGLLQPEPQPRPSSLLPGG*RDSHWP Trigger: TGGCCAATGAGAATCACGGCAGCCCCCGGGAAGGAG...GGATGATGGTCTGGGCTGGGGCTCGGGCTGTAGAAGTCCCAGTCTTTCTCCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR TCA 90 bp | ATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGCCCTTGCAACCCAGCTGGTGGCGTTTaGAGCGGCTCTGCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: MDPLAPVSIKGPESSPCNPAGGV*SGSAPS Trigger: GGATGGAGCAGAGCCGCTTCAAACGCCACCAGCTGG...GTTGCAAGGGCTGGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR TCA 90 bp | CTTCTGGTCCTCACTGACATGGGTTTAGTTTCCTTCCATGCTGACCCACTGGTGAACCACTCAGCGGGGTaGAGTCCAGGCAGGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLVLTDMGLVSFHADPLVNHSAG*SPGRAL Trigger: GAGGGCCCTGCCTGGACTTCACCCCGCTGAGTGGTT...CACCAGTGGGTCAGCATGGAAGGAAACTAAACCCATGTCAGTGAGGACCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | GCAGTGCCTCGAAGGCAACACTTCCTCCTGAGCAGATGGAAAACATCAGCCAGCTCCTTGGAGGCCGAGTaGTCTTTCCGCAGCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVPRRQHFLLSRWKTSASSLEAE*SFRSQL Trigger: CAGCTGGCTGCGGAAAGAGCACTCGGCCTCCAAGGA...GCTGGCTGATGTTTTCCATCTGCTCAGGAGGAAGTGTTGCCTTCGAGGCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | CAACAGGGTCTGGGGCTGGGGAGGCACGGGCCTATTTACAAGGGACTTGGTGAATCCTTCTTGCAGATGTaGTGGGAGCCACTGCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QQGLGLGRHGPIYKGLGESFLQM*WEPLRY Trigger: GTACCGCAGTGGCTCCCAGCACATCTGCAAGAAGGA...TTCACCAAGTCCCTTGTAAATAGGCCCGTGCCTCCCCAGCCCCAGACCCTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | GTTTTGATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGCCCTGCTGCAGCAGAGACATaGGGCCCACACTGCCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VLMDPLAPVSIKGPESSPAAAET*GPHCLR Trigger: TCGGAGGCAGTGTGGGCCCCATGTCTCTGCTGCAGC...AGGGCTGGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCATCAAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | CAACAGGGTCTGGGGCTGGGGAGGCACGGGCCTATTTACAAGGGACTTGGTGAACTTCCACAGAGTCCTTaGCTGCAGCAGAGACATGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQGLGLGRHGPIYKGLGELPQSP*LQQRHG Trigger: CCCATGTCTCTGCTGCAGCCAAGGACTCTGTGGAAG...TTCACCAAGTCCCTTGTAAATAGGCCCGTGCCTCCCCAGCCCCAGACCCTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | GCAGTGCCTCGAAGGCAACACTTCCTCCTGAGCAGATGGAAAACATCAGCCAGCGGCAAGACCAGCTGGTaGCGTTTGAAGCGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AVPRRQHFLLSRWKTSASGKTSW*RLKRLC Trigger: GCAGAGCCGCTTCAAACGCCACCAGCTGGTCTTGCC...GCTGGCTGATGTTTTCCATCTGCTCAGGAGGAAGTGTTGCCTTCGAGGCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR CAA 72 bp | AGAGGCTACCTGGCTCCACAGCCAGCTGGCTCTACCTaGTATGAACAGCGGTTGCAGTACAGGCCAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGYLAPQPAGST*YEQRLQYRPSQ Trigger: CTGGCTTGGCCTGTACTGCAACCGCTGTTCATACAAGGTAGAGCCAGCTGGCTGTGGAGCCAGGTAGCCTCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR TCA 90 bp | GCAGTGCCTCGAAGGCAACACTTCCTCCTGAGCAGATGGAAAACATCAGCCAGCCGTTTCCACCAAGCTTaGGTCTTGGGGCAGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AVPRRQHFLLSRWKTSASRFHQA*VLGQWG Trigger: ACCCCACTGCCCCAAGACTCAAGCTTGGTGGAAACG...GCTGGCTGATGTTTTCCATCTGCTCAGGAGGAAGTGTTGCCTTCGAGGCACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR TCA 90 bp | ATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGCCCTTGCAACTGGAGGCAGGACCTCTaGAGGACCCCTGTGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: MDPLAPVSIKGPESSPCNWRQDL*RTPVLD Trigger: ATCAAGCACAGGGGTCCTTCAGAGGTCCTGCCTCCA...GTTGCAAGGGCTGGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR TCA 90 bp | ATTTTTGTTTTGATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCGCCCTGTTCCCGGCCTaGGTCCCGGTCCTTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IFVLMDPLAPVSIKGPESALFPA*VPVLGL Trigger: GAGGCCAAGGACCGGGACTCAGGCCGGGAACAGGGC...GGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCATCAAAACAAAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCTGCCGCACACTCCGCTGTCACAGGTATGGACCGGATACTGCCAGCCAAGCTTCAAGATGAGCTaGGAGCGGAGCAACTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: WKLPHTPLSQVWTGYCQPSFKMS*ERSNST Trigger: TGTTGAGTTGCTCCGCTCGCAGCTCATCTTGAAGCT...TGGCTGGCAGTATCCGGTCCATACCTGTGACAGCGGAGTGTGCGGCAGCTTCCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | GCACAAGCACATAACAAGCTAGGTGTCCGCGTGTCATGCTCCAAGAAGGGTGGACACAGAGTCCTTGGCTaGAGCAGAGACATGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AQAHNKLGVRVSCSKKGGHRVLG*SRDMGP Trigger: GGGCCCCATGTCTCTGCTGCAGCCAAGGACTCTGTG...TCCACCCTTCTTGGAGCATGACACGCGGACACCTAGCTTGTTATGTGCTTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCTGCCGCACACTCCGCTGTCACAGGTATGGACCGGATACTGCCAGCCAAGATCTTGCTGCAGATaGCTTCCACAGAGTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WKLPHTPLSQVWTGYCQPRSCCR*LPQSPW Trigger: CCAAGGACTCTGTGGAAGGCATCTGCAGCAAGATCT...TGGCTGGCAGTATCCGGTCCATACCTGTGACAGCGGAGTGTGCGGCAGCTTCCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | AGACCCAGTAAAGCTGGGCTGAGCCCTAGCATGCAGAAGGTCCCTCCCCAGCATGGACTTGTTCTCTACTaGGGGCGTTTCCACCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPSKAGLSPSMQKVPPQHGLVLY*GRFHQA Trigger: AGCTTGGTGGAAACGCCCCCAGTAGAGAACAAGTCC...ATGCTGGGGAGGGACCTTCTGCATGCTAGGGCTCAGCCCAGCTTTACTGGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | GTTTTGATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGCCCTCCCAGTACACCTCAGTaGGTCGGAGGAGAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLMDPLAPVSIKGPESSPPSTPQ*VGGELP Trigger: AGGCAGCTCTCCTCCGACCCACTGAGGTGTACTGGG...AGGGCTGGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCATCAAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | CACAGTTTCAACAGGAACGGGCACCTCAAATTCCACATCCAGCGGCTACATAGCCACGGCCAGACGCACTaGGTAGCAGTACACCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HSFNRNGHLKFHIQRLHSHGQTH*VAVHQA Trigger: CGCCTGGTGTACTGCTACCCAGTGCGTCTGGCCGTG...GCTATGTAGCCGCTGGATGTGGAATTTGAGGTGCCCGTTCCTGTTGAAACTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | ATTCTCATGCCACGTCTGCGGGCAGCGGTGAGGCTGGAGATGGCTAAGAACAAGCGCAGAACGGAGGGTTaGCCTCAAAGGAACCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILMPRLRAAVRLEMAKNKRRTEG*PQRNHS Trigger: TGAGTGGTTCCTTTGAGGCCAACCCTCCGTTCTGCG...CTTGTTCTTAGCCATCTCCAGCCTCACCGCTGCCCGCAGACGTGGCATGAGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR TCA 90 bp | GAAAGGGTGGGACAGACAGACAGGCTAGAAGAACTAGAGAGATGGCTCAGAGGGGAGGTGCCTGGAGAGTaGCTTAGAAGGGAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERVGQTDRLEELERWLRGEVPGE*LRREAP Trigger: AGGAGCCTCCCTTCTAAGTCACTCTCCAGGCACCTC...CCCTCTGAGCCATCTCTCTAGTTCTTCTAGCCTGTCTGTCTGTCCCACCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR TCA 90 bp | ACGGGCACCTCAAATTCCACATCCAGCGGCTACATAGCATTGATGGGAGAAAGACCAGCATCCAGCGGTTaGAAGATTCCCGGGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGTSNSTSSGYIALMGERPASSG*KIPGAA Trigger: AGCCGCCCCGGGAATCTTTCAACCGCTGGATGCTGG...TCTTTCTCCCATCAATGCTATGTAGCCGCTGGATGTGGAATTTGAGGTGCCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS-3UTR TCA 90 bp | TCATCCTCAATAGTGAAGAGGAGACACTGGCCACACTACACAGTAAGCTACTCCGCGGGGCTCCAACTCTaGGGCCTCCACTTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSIVKRRHWPHYTVSYSAGLQL*GLHFLW Trigger: CCAGAGGAAGTGGAGGCCTCAGAGTTGGAGCCCCGC...GGAGTAGCTTACTGTGTAGTGTGGCCAGTGTCTCCTCTTCACTATTGAGGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | TCCAAGAACAAGAAGGATCTGAGGCGGCACATGCTAACGCACACCAACGAGAAGCCGTTGCCACTTGGCTaGTCCTCTGAGAGCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SKNKKDLRRHMLTHTNEKPLPLG*SSESCR Trigger: GCGACAGCTCTCAGAGGAGCAGCCAAGTGGCAACGG...CTTCTCGTTGGTGTGCGTTAGCATGTGCCGCCTCAGATCCTTCTTGTTCTTGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | GTTTTGATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGCCCTCCACTGCGGTACTCGTaGTCAAAGGCAGGCAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: VLMDPLAPVSIKGPESSPPLRYS*SKAGKT Trigger: GGTCTTGCCTGCCTTTGAGCACGAGTACCGCAGTGG...AGGGCTGGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCATCAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | CTCCAAGAACAAGAAGGATCTGAGGCGGCACATGCTAACGCACACCAACGAGAAAGCTGGAGCCATGGCTaGGGCCCGACTGCTTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQEQEGSEAAHANAHQRESWSHG*GPTAYR Trigger: CCTATAAGCAGTCGGGCCGCAGCCATGGCTCCAGCT...TTCTCGTTGGTGTGCGTTAGCATGTGCCGCCTCAGATCCTTCTTGTTCTTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | ATGGGAGAAAGACTGGGACTTCTACAGCCCGAGCCCCAGCCCAGACCATCATCCAGAGCTGTCGCTTTCTaGACTTGTTCTCTACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MGERLGLLQPEPQPRPSSRAVAF*TCSLLG Trigger: CCCCAGTAGAGAACAAGTCCAGAAAGCGACAGCTCT...GGATGATGGTCTGGGCTGGGGCTCGGGCTGTAGAAGTCCCAGTCTTTCTCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | GCACAAGCACATAACAAGCTAGGTGTCCGCGTGTCATGCTCCAAGAAGGGTGGACAGTGTTGGGGTTCCTaGGATGCTAGGGGAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQAHNKLGVRVSCSKKGGQCWGS*DARGTG Trigger: CCCAGTTCCCCTAGCATCCCAGGAACCCCAACACTG...TCCACCCTTCTTGGAGCATGACACGCGGACACCTAGCTTGTTATGTGCTTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR CAA 72 bp | CCACAGCCAGCTGGCTCTACCTTGTATGAACAGCGGTaGCAGTACAGGCCAAGCCAGCTTCATCTCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PQPAGSTLYEQR*QYRPSQLHLRR Trigger: TCTCCTGAGATGAAGCTGGCTTGGCCTGTACTGCAACCGCTGTTCATACAAGGTAGAGCCAGCTGGCTGTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR TCA 90 bp | ATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGCCCTTGCAACCGAAGCACTCGAAACTaGCACCAAAGAGTCGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MDPLAPVSIKGPESSPCNRSTRN*HQRVGG Trigger: TCCACCGACTCTTTGGTGTCAGTTTCGAGTGCTTCG...GTTGCAAGGGCTGGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGGCACTGAGCCAAGAACACATCATTGTGGCCCAGGAACAGACAGTGACCCGCCTGGCAGCTTCTaGGTATTTAAAGAGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TAGTEPRTHHCGPGTDSDPPGSF*VFKEQA Trigger: CGCCTGCTCTTTAAATACGCAGAAGCTGCCAGGCGG...GTCACTGTCTGTTCCTGGGCCACAATGATGTGTTCTTGGCTCAGTGCCTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | CTTCTGGTCCTCACTGACATGGGTTTAGTTTCCTTCCATGCTGACCCACTGGTGTGTGCTGGGAGCCACTaGGGTACTCGTGCTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVLTDMGLVSFHADPLVCAGSH*GTRAQR Trigger: CCTTTGAGCACGAGTACCGCAGTGGCTCCCAGCACA...CACCAGTGGGTCAGCATGGAAGGAAACTAAACCCATGTCAGTGAGGACCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | CTTCTGGTCCTCACTGACATGGGTTTAGTTTCCTTCCATGCTGACCCACTGGTGCTGCAGGAAGAGCACTaGCGTGTTGTGGACGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLVLTDMGLVSFHADPLVLQEEH*RVVDGL Trigger: AAGGCCGTCCACAACACGGCAGTGCTCTTCCTGCAG...CACCAGTGGGTCAGCATGGAAGGAAACTAAACCCATGTCAGTGAGGACCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | CACAGTTTCAACAGGAACGGGCACCTCAAATTCCACATCCAGCGGCTACATAGCCAGGCGAACTGGCTTTaGAGAACAGGGCTGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSFNRNGHLKFHIQRLHSQANWL*RTGLAL Trigger: CAGAGCCAGCCCTGTTCTCCAAAGCCAGTTCGCCTG...GCTATGTAGCCGCTGGATGTGGAATTTGAGGTGCCCGTTCCTGTTGAAACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | ACGGGCACCTCAAATTCCACATCCAGCGGCTACATAGCATTGATGGGAGAAAGAGCAGGCAAGACCAGCTaGTGGCGTTTGAAGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGTSNSTSSGYIALMGERAGKTS*WRLKRL Trigger: GAGCCGCTTCAAACGCCACCAGCTGGTCTTGCCTGC...TCTTTCTCCCATCAATGCTATGTAGCCGCTGGATGTGGAATTTGAGGTGCCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | GAAAGGGTGGGACAGACAGACAGGCTAGAAGAACTAGAGAGATGGCTCAGAGGGTTCTTGCAGATGTGCTaGGAGCCACTGCGGTACTCG | + |
|
Preference number: 4 (lower is better) Translates to: ERVGQTDRLEELERWLRGFLQMC*EPLRYS Trigger: CGAGTACCGCAGTGGCTCCCAGCACATCTGCAAGAA...CCCTCTGAGCCATCTCTCTAGTTCTTCTAGCCTGTCTGTCTGTCCCACCCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR CAA 72 bp | CTCAGACAACCAGGTAACCTCCTGTCCCTGAGGCCATaGTCCATAGCTGTGTCTTCTACTCTGCCCTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: LRQPGNLLSLRP*SIAVSSTLPLP Trigger: GGGTAAGGGCAGAGTAGAAGACACAGCTATGGACAATGGCCTCAGGGACAGGAGGTTACCTGGTTGTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR TCA 90 bp | TCCAAGAACAAGAAGGATCTGAGGCGGCACATGCTAACGCACACCAACGAGAAGACTTGGCTGCTCCTCTaGGAGCTGTCGCTTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKNKKDLRRHMLTHTNEKTWLLL*ELSLSG Trigger: TCCAGAAAGCGACAGCTCTCAGAGGAGCAGCCAAGT...CTTCTCGTTGGTGTGCGTTAGCATGTGCCGCCTCAGATCCTTCTTGTTCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR TCA 90 bp | GCAGTGCCTCGAAGGCAACACTTCCTCCTGAGCAGATGGAAAACATCAGCCAGCCCTCCACGTTCCATTTaGCCACTTTTCTGCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVPRRQHFLLSRWKTSASPPRSI*PLFCCQ Trigger: CTGACAGCAGAAAAGTGGTCAAATGGAACGTGGAGG...GCTGGCTGATGTTTTCCATCTGCTCAGGAGGAAGTGTTGCCTTCGAGGCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | GCACAAGCACATAACAAGCTAGGTGTCCGCGTGTCATGCTCCAAGAAGGGTGGAGGCTCTGACTGGAGGTaGCTGGAGAGTGACTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AQAHNKLGVRVSCSKKGGGSDWR*LESDLE Trigger: TTCTAAGTCACTCTCCAGGCACCTCCAGTCAGAGCC...TCCACCCTTCTTGGAGCATGACACGCGGACACCTAGCTTGTTATGTGCTTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | ACGGGCACCTCAAATTCCACATCCAGCGGCTACATAGCATTGATGGGAGAAAGAGCACTTCTCCCAGCCTaGATGTACCAGCTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGTSNSTSSGYIALMGERALLPA*MYQLLW Trigger: CCAGAGGAGCTGGTACATGCAGGCTGGGAGAAGTGC...TCTTTCTCCCATCAATGCTATGTAGCCGCTGGATGTGGAATTTGAGGTGCCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | CTCCAAGAACAAGAAGGATCTGAGGCGGCACATGCTAACGCACACCAACGAGAAGCTTCTTCACTCCGTTaGCACTTGGCTGCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQEQEGSEAAHANAHQREASSLR*HLAAPL Trigger: CAGAGGAGCAGCCAAGTGGCAACGGAGTGAAGAAGC...TTCTCGTTGGTGTGCGTTAGCATGTGCCGCCTCAGATCCTTCTTGTTCTTGGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | AAGGCAACACTTCCTCCTGAGCAGATGGAAAACATCAGCCAGCCTGGAAGTCTGAGGGTCTCAAAGACATaGACTGGCAGTGACCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KATLPPEQMENISQPGSLRVSKT*TGSDPC Trigger: GCAGGGGTCACTGCCAGTGCATGTCTTTGAGACCCT...CAGACTTCCAGGCTGGCTGATGTTTTCCATCTGCTCAGGAGGAAGTGTTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | GTTTTGATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGCCCTACCAAGCTTGAGTCTTaGGGCAGTGGGGTTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VLMDPLAPVSIKGPESSPTKLES*GSGVAF Trigger: GAATGCAACCCCACTGCCCCAAGACTCAAGCTTGGT...AGGGCTGGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCATCAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | ATTTTTGTTTTGATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGGAGGAAGAAGAGCTaGAGCCATGGCTGCGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: IFVLMDPLAPVSIKGPESRRKKS*SHGCGP Trigger: CGGGCCGCAGCCATGGCTCCAGCTCTTCTTCCTCCT...GGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCATCAAAACAAAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | TCCAAGAACAAGAAGGATCTGAGGCGGCACATGCTAACGCACACCAACGAGAAGGGGTCGGAGGAGAGCTaGCTGTTTATCTTCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKNKKDLRRHMLTHTNEKGSEES*LFIFSG Trigger: TCCACTGAAGATAAACAGGCAGCTCTCCTCCGACCC...CTTCTCGTTGGTGTGCGTTAGCATGTGCCGCCTCAGATCCTTCTTGTTCTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | GTTTTGATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGCCCTACACTGTTCTCCACGTaGATCTCCACACTAGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: VLMDPLAPVSIKGPESSPTLFST*ISTLGM Trigger: CATGCCTAGTGTGGAGATGCACGTGGAGAACAGTGT...AGGGCTGGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCATCAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | TCATCCTCAATAGTGAAGAGGAGACACTGGCCACACTACACAGTAAGCTACTCCCGTTTGAAGCGGCTCTaGTCCATCCTGGTGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSIVKRRHWPHYTVSYSRLKRL*SILVSA Trigger: AGCGCTCACCAGGATGGAGCAGAGCCGCTTCAAACG...GGAGTAGCTTACTGTGTAGTGTGGCCAGTGTCTCCTCTTCACTATTGAGGATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | CTCCAAGAACAAGAAGGATCTGAGGCGGCACATGCTAACGCACACCAACGAGAAGCATTTCCTCCTTCTTaGAGATGTGCTGGGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQEQEGSEAAHANAHQREAFPPS*RCAGSH Trigger: GTGGCTCCCAGCACATCTGCAAGAAGGAGGAAATGC...TTCTCGTTGGTGTGCGTTAGCATGTGCCGCCTCAGATCCTTCTTGTTCTTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | GCACAAGCACATAACAAGCTAGGTGTCCGCGTGTCATGCTCCAAGAAGGGTGGATGTGGTAGATCTTGCTaGAGATGCCTTCCACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AQAHNKLGVRVSCSKKGGCGRSC*RCLPQS Trigger: ACTCTGTGGAAGGCATCTGCAGCAAGATCTACCACA...TCCACCCTTCTTGGAGCATGACACGCGGACACCTAGCTTGTTATGTGCTTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGTCCTCACTGACATGGGTTTAGTTTCCTTCCATGCTGACCCACTGGTGATGACAGCATTGGTCTaGATGTCCAGGTCCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLVLTDMGLVSFHADPLVMTALV*MSRSQY Trigger: GTACTGGGACCTGGACATCCAGACCAATGCTGTCAT...CACCAGTGGGTCAGCATGGAAGGAAACTAAACCCATGTCAGTGAGGACCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGGCACTGAGCCAAGAACACATCATTGTGGCCCAGGAACAGACAGTGACTGGTTCACAGTTGCTTaGCAACAGAGGATCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: TAGTEPRTHHCGPGTDSDWFTVA*QQRITS Trigger: GGATGTGATCCTCTGTTGCCAAGCAACTGTGAACCA...GTCACTGTCTGTTCCTGGGCCACAATGATGTGTTCTTGGCTCAGTGCCTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | TATGATAGACCAATTCCTATCTGGTCCATGCTTCTGGTCCTCACTGACATGGGTCTTTGTCCACCACTTTaGGCTCCAGCATCCAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: YDRPIPIWSMLLVLTDMGLCPPL*APASSG Trigger: ACCGCTGGATGCTGGAGCGCAAAGTGGTGGACAAAG...ACCCATGTCAGTGAGGACCAGAAGCATGGACCAGATAGGAATTGGTCTATCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | TATGATAGACCAATTCCTATCTGGTCCATGCTTCTGGTCCTCACTGACATGGGTCTGTACCAGGCGAACTaGCTTTGGAGAACAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YDRPIPIWSMLLVLTDMGLYQAN*LWRTGL Trigger: CAGCCCTGTTCTCCAAAGCCAGTTCGCCTGGTACAG...ACCCATGTCAGTGAGGACCAGAAGCATGGACCAGATAGGAATTGGTCTATCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGTCCTCACTGACATGGGTTTAGTTTCCTTCCATGCTGACCCACTGGTGATCTCCCACAGAGACTaGTTGGTGAATCGGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLVLTDMGLVSFHADPLVISHRD*LVNRLK Trigger: CTTCAACCGATTCACCAACCAGTCTCTGTGGGAGAT...CACCAGTGGGTCAGCATGGAAGGAAACTAAACCCATGTCAGTGAGGACCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | CTCCAAGAACAAGAAGGATCTGAGGCGGCACATGCTAACGCACACCAACGAGAAGGATGGAGACACAACTaGTTCACAGTTGCTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LQEQEGSEAAHANAHQREGWRHN*FTVAWQ Trigger: TTGCCAAGCAACTGTGAACCAGTTGTGTCTCCATCC...TTCTCGTTGGTGTGCGTTAGCATGTGCCGCCTCAGATCCTTCTTGTTCTTGGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR CAA 72 bp | GTCAGACGAGTGCAGGAGTCCAGCTCTGGGAGCTGCTaGGTCAGGAACCTAACCAGATATAAAGTGACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: VRRVQESSSGSC*VRNLTRYKVTN Trigger: ATTAGTCACTTTATATCTGGTTAGGTTCCTGACCAAGCAGCTCCCAGAGCTGGACTCCTGCACTCGTCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | TCCAAGAACAAGAAGGATCTGAGGCGGCACATGCTAACGCACACCAACGAGAAGTTGAGGACAGCAAGGTaGTTTTCTCGGATCCGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SKNKKDLRRHMLTHTNEKLRTAR*FSRIRL Trigger: TAAACGGATCCGAGAAAAGCACCTTGCTGTCCTCAA...CTTCTCGTTGGTGTGCGTTAGCATGTGCCGCCTCAGATCCTTCTTGTTCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | ATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGCCCTTGCAACCCTGTTTATCTTCAGTaGATGAACCCCAAATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MDPLAPVSIKGPESSPCNPVYLQ*MNPKSS Trigger: TGAAGATTTGGGGTTCATCCACTGAAGATAAACAGG...GTTGCAAGGGCTGGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | GTTTTGATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGCCCTTTCACGAAACATGGATaGAGACACAACTGGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VLMDPLAPVSIKGPESSPFTKHG*RHNWFT Trigger: TGTGAACCAGTTGTGTCTCCATCCATGTTTCGTGAA...AGGGCTGGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCATCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CCA 90 bp | TCATCCTCAATAGTGAAGAGGAGACACTGGCCACACTACACAGTAAGCTACTCCCAGGGATTTCAATCTTaGGCTTCTTCACTCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSIVKRRHWPHYTVSYSQGFQS*ASSLRC Trigger: GCAACGGAGTGAAGAAGCCCAAGATTGAAATCCCTG...GGAGTAGCTTACTGTGTAGTGTGGCCAGTGTCTCCTCTTCACTATTGAGGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR TCA 90 bp | AAGGCAACACTTCCTCCTGAGCAGATGGAAAACATCAGCCAGCCTGGAAGTCTGTTTATCTTCAGTGGATaGACCCCAAATCTTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KATLPPEQMENISQPGSLFIFSG*TPNLQC Trigger: ACACTGAAGATTTGGGGTTCATCCACTGAAGATAAA...CAGACTTCCAGGCTGGCTGATGTTTTCCATCTGCTCAGGAGGAAGTGTTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR GCA 90 bp | ATTTTTGTTTTGATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCCAACTGGTTCACAGTTaGTTGGCAACAGAGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: IFVLMDPLAPVSIKGPESQLVHS*LATEDH Trigger: GTGATCCTCTGTTGCCAAGCAACTGTGAACCAGTTG...GGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCATCAAAACAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR TCA 90 bp | TATGATAGACCAATTCCTATCTGGTCCATGCTTCTGGTCCTCACTGACATGGGTGGATGTTGTTTTCCTTaGGGACAGCAAGGTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YDRPIPIWSMLLVLTDMGGCCFP*GQQGAF Trigger: AAAAGCACCTTGCTGTCCTCAAGGAAAACAACATCC...ACCCATGTCAGTGAGGACCAGAAGCATGGACCAGATAGGAATTGGTCTATCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| 3UTR CAA 72 bp | TGCTGGCAGGCTTTGGGAGAGAAATTTATTTTTGTTTaGATGGACCCACTGGCTCCTGTCTCAATAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CWQALGEKFIFV*MDPLAPVSIKG Trigger: TCCCTTTATTGAGACAGGAGCCAGTGGGTCCATCAAAACAAAAATAAATTTCTCTCCCAAAGCCTGCCAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS CCA 90 bp | GCGGCCCGACTGCTTATAGGCAGCGGTGAGCTCCTGCAGCCGCTCTaGCGTCGGCCCCCACTTGGCGAACCCGGGGCCATTCTGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AARLLIGSGELLQPL*RRPPLGEPGAILQE Trigger: TTCCTGCAGAATGGCCCCGGGTTCGCCAAGTGGGGGCCGACGCCAGAGCGGCTGCAGGAGCTCACCGCTGCCTATAAGCAGTCGGGCCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS TCA 90 bp | CCCGCTGCTGGCACAGTTCCCGGTAGTGCTGGCGGAGCTTCAAGATaGGCTGCGAGCGGAGCAACTCAACATCAGGGTGTGGAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PAAGTVPGSAGGASR*AASGATQHQGVEAG Trigger: TCCTGCCTCCACACCCTGATGTTGAGTTGCTCCGCTCGCAGCTCATCTTGAAGCTCCGCCAGCACTACCGGGAACTGTGCCAGCAGCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS GCA 90 bp | GTAGTAGGGACGGCTCTCCCTCCGGCTCCAGCACTTCTCCCAGCCTaGATGTACCAGCTCCTCTGGAAGGTCCTGTACCAGGCGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVGTALPPAPALLPA*MYQLLWKVLYQANW Trigger: CCAGTTCGCCTGGTACAGGACCTTCCAGAGGAGCTGGTACATGCAGGCTGGGAGAAGTGCTGGAGCCGGAGGGAGAGCCGTCCCTACTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS CCA 90 bp | GAGCCACTGCGGTACTCGTGCTCAAAGGCAGGCAAGACCAGCTGGTaGCGTTTGAAGCGGCTCTGCTCCATCCTGGTGAGCGCTGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EPLRYSCSKAGKTSW*RLKRLCSILVSAGV Trigger: CACACCAGCGCTCACCAGGATGGAGCAGAGCCGCTTCAAACGCCACCAGCTGGTCTTGCCTGCCTTTGAGCACGAGTACCGCAGTGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS CCA 90 bp | TGGGAGCCACTGCGGTACTCGTGCTCAAAGGCAGGCAAGACCAGCTaGTGGCGTTTGAAGCGGCTCTGCTCCATCCTGGTGAGCGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WEPLRYSCSKAGKTS*WRLKRLCSILVSAG Trigger: ACCAGCGCTCACCAGGATGGAGCAGAGCCGCTTCAAACGCCACCAGCTGGTCTTGCCTGCCTTTGAGCACGAGTACCGCAGTGGCTCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS GCA 90 bp | CGGCCCCCACTTGGCGAACCCGGGGCCATTCTGCAGGAAGAGCACTaGCGTGTTGTGGACGGCCTTGTAGTGCATTTCCTCCTTCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RPPLGEPGAILQEEH*RVVDGLVVHFLLLA Trigger: TGCAAGAAGGAGGAAATGCACTACAAGGCCGTCCACAACACGGCAGTGCTCTTCCTGCAGAATGGCCCCGGGTTCGCCAAGTGGGGGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS CCA 90 bp | CCTGTACCAGGCGAACTGGCTTTGGAGAACAGGGCTGGCTCTGACTaGAGGTGCCTGGAGAGTGACTTAGAAGGGAGGCTCCTTCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PVPGELALENRAGSD*RCLESDLEGRLLPG Trigger: CCCGGGAAGGAGCCTCCCTTCTAAGTCACTCTCCAGGCACCTCCAGTCAGAGCCAGCCCTGTTCTCCAAAGCCAGTTCGCCTGGTACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS TCA 90 bp | GATCACATCCTTTGTCCACCACTTTGCGCTCCAGCATCCAGCGGTTaGAAGATTCCCGGGGCGGCTCAATGCCCTCCCGCTGCTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: DHILCPPLCAPASSG*KIPGAAQCPPAAGT Trigger: TGTGCCAGCAGCGGGAGGGCATTGAGCCGCCCCGGGAATCTTTCAACCGCTGGATGCTGGAGCGCAAAGTGGTGGACAAAGGATGTGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS TCA 90 bp | GGCCAGACGCACTGGGTAGCAGTACACCAGGCGGGGCTCCAACTCTaGGGCCTCCACTTCCTCTGGGATGTTGTTTTCCTTGAGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GQTHWVAVHQAGLQL*GLHFLWDVVFLEDS Trigger: GCTGTCCTCAAGGAAAACAACATCCCAGAGGAAGTGGAGGCCTCAGAGTTGGAGCCCCGCCTGGTGTACTGCTACCCAGTGCGTCTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CAA 90 bp | ATTCTCATGCCACGTCTGCGGGCAGCGGTGAGGCTGGAGATGGCTAAGAACAAGTCCAGCATCCAGCGGTaGAAAGATTCCCGGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ILMPRLRAAVRLEMAKNKSSIQR*KDSRGG Trigger: GCCGCCCCGGGAATCTTTCAACCGCTGGATGCTGGA...CTTGTTCTTAGCCATCTCCAGCCTCACCGCTGCCCGCAGACGTGGCATGAGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CAA 90 bp | ATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGCCCTTGCAACCCTGAGTCCCGGTCCTaGGCCTCGGAGGAGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: MDPLAPVSIKGPESSPCNPESRS*ASEEEE Trigger: TTCCTCCTCCTCCGAGGCCAAGGACCGGGACTCAGG...GTTGCAAGGGCTGGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS TCA 90 bp | GACACCAAAGAGTCGGTGGAGGGTCTCAAAGACATGCACTGGCAGTaGCCCCTGCAGGCCAGTCCCCTCATAGAGGCCCACGCCAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: DTKESVEGLKDMHWQ*PLQASPLIEAHAKH Trigger: ATGTTTGGCGTGGGCCTCTATGAGGGGACTGGCCTGCAGGGGTCACTGCCAGTGCATGTCTTTGAGACCCTCCACCGACTCTTTGGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS GCA 90 bp | GATGTGGTAGATCTTGCTGCAGATGCCTTCCACAGAGTCCTTGGCTaGAGCAGAGACATGGGGCCCACACTGCCTCCGAAGGTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DVVDLAADAFHRVLG*SRDMGPTLPPKVLQ Trigger: CTGGAGCACCTTCGGAGGCAGTGTGGGCCCCATGTCTCTGCTGCAGCCAAGGACTCTGTGGAAGGCATCTGCAGCAAGATCTACCACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS CCA 90 bp | GGCAGGACCTCTGAAGGACCCCTGTGCTTGATGACAGCATTGGTCTaGATGTCCAGGTCCCAGTACACCTCAGTGGGTCGGAGGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRTSEGPLCLMTALV*MSRSQYTSVGRRRA Trigger: AGCTCTCCTCCGACCCACTGAGGTGTACTGGGACCTGGACATCCAGACCAATGCTGTCATCAAGCACAGGGGTCCTTCAGAGGTCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS CCA 90 bp | GGGAGATGTGGTAGATCTTGCTGCAGATGCCTTCCACAGAGTCCTTaGCTGCAGCAGAGACATGGGGCCCACACTGCCTCCGAAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRCGRSCCRCLPQSP*LQQRHGAHTASEGA Trigger: AGCACCTTCGGAGGCAGTGTGGGCCCCATGTCTCTGCTGCAGCCAAGGACTCTGTGGAAGGCATCTGCAGCAAGATCTACCACATCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CAA 90 bp | GTCACCGAGGCAACCGCCCCAAGACCCTCACACACTCTTGGGGAGTTTCTGTATCCAGGCGAACTGGCTTaGGAGAACAGGGCTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VTEATAPRPSHTLGEFLYPGELA*ENRAGS Trigger: AGAGCCAGCCCTGTTCTCCAAAGCCAGTTCGCCTGG...ATACAGAAACTCCCCAAGAGTGTGTGAGGGTCTTGGGGCGGTTGCCTCGGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CAA 90 bp | ATGGGAGAAAGACTGGGACTTCTACAGCCCGAGCCCCAGCCCAGACCATCATCCTCACTCCGTTGCCACTaGGCTGCTCCTCTGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: MGERLGLLQPEPQPRPSSSLRCH*AAPLRA Trigger: AGCTCTCAGAGGAGCAGCCAAGTGGCAACGGAGTGA...GGATGATGGTCTGGGCTGGGGCTCGGGCTGTAGAAGTCCCAGTCTTTCTCCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CAA 90 bp | AGACCCAGTAAAGCTGGGCTGAGCCCTAGCATGCAGAAGGTCCCTCCCCAGCATGGCTTCTTCACTCCGTaGCCACTTGGCTGCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RPSKAGLSPSMQKVPPQHGFFTP*PLGCSS Trigger: AGAGGAGCAGCCAAGTGGCAACGGAGTGAAGAAGCC...ATGCTGGGGAGGGACCTTCTGCATGCTAGGGCTCAGCCCAGCTTTACTGGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS TCA 90 bp | CTGCGAGCGGAGCAACTCAACATCAGGGTGTGGAGGCAGGACCTCTaGAGGACCCCTGTGCTTGATGACAGCATTGGTCTGGATGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRAEQLNIRVWRQDL*RTPVLDDSIGLDVQ Trigger: CTGGACATCCAGACCAATGCTGTCATCAAGCACAGGGGTCCTTCAGAGGTCCTGCCTCCACACCCTGATGTTGAGTTGCTCCGCTCGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS GCA 90 bp | ATTTCCTCCTTCTTGCAGATGTGCTGGGAGCCACTGCGGTACTCGTaGTCAAAGGCAGGCAAGACCAGCTGGTGGCGTTTGAAGCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ISSFLQMCWEPLRYS*SKAGKTSWWRLKRL Trigger: GAGCCGCTTCAAACGCCACCAGCTGGTCTTGCCTGCCTTTGAGCACGAGTACCGCAGTGGCTCCCAGCACATCTGCAAGAAGGAGGAAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCTGCCGCACACTCCGCTGTCACAGGTATGGACCGGATACTGCCAGCCAGCTTCCTCCCGGAACTaGATTCGGGATAACCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: WKLPHTPLSQVWTGYCQPASSRN*IRDNLM Trigger: CATCAGGTTATCCCGAATCAAGTTCCGGGAGGAAGC...TGGCTGGCAGTATCCGGTCCATACCTGTGACAGCGGAGTGTGCGGCAGCTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CAA 90 bp | ATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGCCCTTGCAACACCAGCTGGTGGCGTTaGAAGCGGCTCTGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: MDPLAPVSIKGPESSPCNTSWWR*KRLCSI Trigger: GATGGAGCAGAGCCGCTTCAAACGCCACCAGCTGGT...GTTGCAAGGGCTGGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS GCA 90 bp | CCTTGTAGTGCATTTCCTCCTTCTTGCAGATGTGCTGGGAGCCACTaGGGTACTCGTGCTCAAAGGCAGGCAAGACCAGCTGGTGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: PCSAFPPSCRCAGSH*GTRAQRQARPAGGV Trigger: AACGCCACCAGCTGGTCTTGCCTGCCTTTGAGCACGAGTACCGCAGTGGCTCCCAGCACATCTGCAAGAAGGAGGAAATGCACTACAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS-3UTR CAA 90 bp | ACAGCAGGCACTGAGCCAAGAACACATCATTGTGGCCCAGGAACAGACAGTGACGCGTTTCCACCAAGCTaGAGTCTTGGGGCAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TAGTEPRTHHCGPGTDSDAFPPS*SLGAVG Trigger: CCCCACTGCCCCAAGACTCAAGCTTGGTGGAAACGC...GTCACTGTCTGTTCCTGGGCCACAATGATGTGTTCTTGGCTCAGTGCCTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS GCA 90 bp | GTCAGGGGATGCACTCCTGGACTCAATGAGCCGCCTGGCAGCTTCTaGGTATTTAAAGAGCAGGCGTTTGGCTTCCTCCCGGAACTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VRGCTPGLNEPPGSF*VFKEQAFGFLPELD Trigger: ATCAAGTTCCGGGAGGAAGCCAAACGCCTGCTCTTTAAATACGCAGAAGCTGCCAGGCGGCTCATTGAGTCCAGGAGTGCATCCCCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS-3UTR CAA 90 bp | ATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGCCCTTGCAACGAAGGACCCCTGTGCTaGATGACAGCATTGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MDPLAPVSIKGPESSPCNEGPLC*MTALVW Trigger: CCAGACCAATGCTGTCATCAAGCACAGGGGTCCTTC...GTTGCAAGGGCTGGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS-3UTR CAA 90 bp | CTCCAAGAACAAGAAGGATCTGAGGCGGCACATGCTAACGCACACCAACGAGAACCTTTGTCCACCACTTaGCGCTCCAGCATCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LQEQEGSEAAHANAHQREPLSTT*RSSIQR Trigger: CCGCTGGATGCTGGAGCGCAAAGTGGTGGACAAAGG...TTCTCGTTGGTGTGCGTTAGCATGTGCCGCCTCAGATCCTTCTTGTTCTTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS-3UTR CAA 90 bp | GCAGTGCCTCGAAGGCAACACTTCCTCCTGAGCAGATGGAAAACATCAGCCAGCTGTCGCTTTCTGGACTaGTTCTCTACTGGGGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: AVPRRQHFLLSRWKTSASCRFLD*FSTGGV Trigger: AACGCCCCCAGTAGAGAACAAGTCCAGAAAGCGACA...GCTGGCTGATGTTTTCCATCTGCTCAGGAGGAAGTGTTGCCTTCGAGGCACTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS-3UTR CAA 90 bp | ACAGCAGGCACTGAGCCAAGAACACATCATTGTGGCCCAGGAACAGACAGTGACTGGGCACTGACTGGCTaGTGGGTGTCACAGGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: TAGTEPRTHHCGPGTDSDWALTG*WVSQGF Trigger: AAATCCCTGTGACACCCACAAGCCAGTCAGTGCCCA...GTCACTGTCTGTTCCTGGGCCACAATGATGTGTTCTTGGCTCAGTGCCTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CAA 90 bp | ATGGACCCACTGGCTCCTGTCTCAATAAAGGGACCAGAGTCCAGCCCTTGCAACTGCATTTCCTCCTTCTaGCAGATGTGCTGGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MDPLAPVSIKGPESSPCNCISSF*QMCWEP Trigger: TGGCTCCCAGCACATCTGCAAGAAGGAGGAAATGCA...GTTGCAAGGGCTGGACTCTGGTCCCTTTATTGAGACAGGAGCCAGTGGGTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS TCA 90 bp | TTCAATCTTGGGCTTCTTCACTCCGTTGCCACTTGGCTGCTCCTCTaGGAGCTGTCGCTTTCTGGACTTGTTCTCTACTGGGGGCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FNLGLLHSVATWLLL*ELSLSGLVLYWGRF Trigger: GAAACGCCCCCAGTAGAGAACAAGTCCAGAAAGCGACAGCTCTCAGAGGAGCAGCCAAGTGGCAACGGAGTGAAGAAGCCCAAGATTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CCA 90 bp | TTCAGTGTTGGGGTTCCTGGGATGCTAGGGGAACTGGGCACTGACTaGCTTGTGGGTGTCACAGGGATTTCAATCTTGGGCTTCTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: FSVGVPGMLGELGTD*LVGVTGISILGFFT Trigger: AGTGAAGAAGCCCAAGATTGAAATCCCTGTGACACCCACAAGCCAGTCAGTGCCCAGTTCCCCTAGCATCCCAGGAACCCCAACACTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CAA 90 bp | GAAAGGGTGGGACAGACAGACAGGCTAGAAGAACTAGAGAGATGGCTCAGAGGGTGCTTGATGACAGCATaGGTCTGGATGTCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ERVGQTDRLEELERWLRGCLMTA*VWMSRS Trigger: GGACCTGGACATCCAGACCAATGCTGTCATCAAGCA...CCCTCTGAGCCATCTCTCTAGTTCTTCTAGCCTGTCTGTCTGTCCCACCCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS-3UTR CAA 90 bp | GCACAAGCACATAACAAGCTAGGTGTCCGCGTGTCATGCTCCAAGAAGGGTGGATTAAAGAGCAGGCGTTaGGCTTCCTCCCGGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: AQAHNKLGVRVSCSKKGGLKSRR*ASSRNL Trigger: CAAGTTCCGGGAGGAAGCCAAACGCCTGCTCTTTAA...TCCACCCTTCTTGGAGCATGACACGCGGACACCTAGCTTGTTATGTGCTTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS GCA 90 bp | ACAGGGATTTCAATCTTGGGCTTCTTCACTCCGTTGCCACTTGGCTaGTCCTCTGAGAGCTGTCGCTTTCTGGACTTGTTCTCTACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TGISILGFFTPLPLG*SSESCRFLDLFSTG Trigger: CCCAGTAGAGAACAAGTCCAGAAAGCGACAGCTCTCAGAGGAGCAGCCAAGTGGCAACGGAGTGAAGAAGCCCAAGATTGAAATCCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CAA 90 bp | GCACAAGCACATAACAAGCTAGGTGTCCGCGTGTCATGCTCCAAGAAGGGTGGAACAACTGGTTCACAGTaGCTTGGCAACAGAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: AQAHNKLGVRVSCSKKGGTTGSQ*LGNRGS Trigger: TGATCCTCTGTTGCCAAGCAACTGTGAACCAGTTGT...TCCACCCTTCTTGGAGCATGACACGCGGACACCTAGCTTGTTATGTGCTTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CAA 90 bp | GAAAGGGTGGGACAGACAGACAGGCTAGAAGAACTAGAGAGATGGCTCAGAGGGACTTCCTCTGGGATGTaGTTTTCCTTGAGGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ERVGQTDRLEELERWLRGTSSGM*FSLRTA Trigger: TGCTGTCCTCAAGGAAAACAACATCCCAGAGGAAGT...CCCTCTGAGCCATCTCTCTAGTTCTTCTAGCCTGTCTGTCTGTCCCACCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS-3UTR CAA 90 bp | CACAGTTTCAACAGGAACGGGCACCTCAAATTCCACATCCAGCGGCTACATAGCGGGATGTTGTTTTCCTaGAGGACAGCAAGGTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSFNRNGHLKFHIQRLHSGMLFS*RTARCF Trigger: AAAGCACCTTGCTGTCCTCAAGGAAAACAACATCCC...GCTATGTAGCCGCTGGATGTGGAATTTGAGGTGCCCGTTCCTGTTGAAACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS CCA 90 bp | AATTTCACGAAACATGGATGGAGACACAACTGGTTCACAGTTGCTTaGCAACAGAGGATCACATCCTTTGTCCACCACTTTGCGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NFTKHGWRHNWFTVA*QQRITSFVHHFALQ Trigger: CTGGAGCGCAAAGTGGTGGACAAAGGATGTGATCCTCTGTTGCCAAGCAACTGTGAACCAGTTGTGTCTCCATCCATGTTTCGTGAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS CCA 90 bp | GGGAATGTCATTCATAATTTCACGAAACATGGATGGAGACACAACTaGTTCACAGTTGCTTGGCAACAGAGGATCACATCCTTTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GNVIHNFTKHGWRHN*FTVAWQQRITSFVH Trigger: GTGGACAAAGGATGTGATCCTCTGTTGCCAAGCAACTGTGAACCAGTTGTGTCTCCATCCATGTTTCGTGAAATTATGAATGACATTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS GCA 72 bp | GGCGTCGGCCCCCACTTGGCGAACCCGGGGCCATTCTaGAGGAAGAGCACTGCCGTGTTGTGGACGGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GVGPHLANPGPF*RKSTAVLWTAL Trigger: CAAGGCCGTCCACAACACGGCAGTGCTCTTCCTGCAGAATGGCCCCGGGTTCGCCAAGTGGGGGCCGACGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS CCA 72 bp | CTGCTTATAGGCAGCGGTGAGCTCCTGCAGCCGCTCTaGCGTCGGCCCCCACTTGGCGAACCCGGGGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: LLIGSGELLQPL*RRPPLGEPGAI Trigger: AATGGCCCCGGGTTCGCCAAGTGGGGGCCGACGCCAGAGCGGCTGCAGGAGCTCACCGCTGCCTATAAGCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS TCA 72 bp | ACGGAGGGTTGGCCTCAAAGGAACCACTCAGCGGGGTaGAGTCCAGGCAGGGCCCTCGGGAGCCAAAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: TEGWPQRNHSAG*SPGRALGSQSS Trigger: GCTACTTTGGCTCCCGAGGGCCCTGCCTGGACTTCACCCCGCTGAGTGGTTCCTTTGAGGCCAACCCTCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS CAA 72 bp | CTACTAGGGCCCTGTTCCCGGCCTGAGTCCCGGTCCTaGGCCTCGGAGGAGGAGGAAGAGGAGGAGGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLGPCSRPESRS*ASEEEEEEEEE Trigger: TTCTTCCTCCTCCTCTTCCTCCTCCTCCGAGGCCAAGGACCGGGACTCAGGCCGGGAACAGGGCCCTAGTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS TCA 72 bp | GCATTCAGCCCCAGAGGGTCCGAAAGCACGTCGTGCTaGCCCAGCACGGGCATCTCCCACAGAGACTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: AFSPRGSESTSC*PSTGISHRDWL Trigger: CAACCAGTCTCTGTGGGAGATGCCCGTGCTGGGTCAGCACGACGTGCTTTCGGACCCTCTGGGGCTGAATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS TCA 72 bp | GAGTCGGTGGAGGGTCTCAAAGACATGCACTGGCAGTaGCCCCTGCAGGCCAGTCCCCTCATAGAGGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ESVEGLKDMHWQ*PLQASPLIEAH Trigger: GTGGGCCTCTATGAGGGGACTGGCCTGCAGGGGTCACTGCCAGTGCATGTCTTTGAGACCCTCCACCGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS GCA 72 bp | ACGGCTCTCCCTCCGGCTCCAGCACTTCTCCCAGCCTaGATGTACCAGCTCCTCTGGAAGGTCCTGTACCAG | + |
|
Preference number: 6 (lower is better) Translates to: TALPPAPALLPA*MYQLLWKVLYQ Trigger: CTGGTACAGGACCTTCCAGAGGAGCTGGTACATGCAGGCTGGGAGAAGTGCTGGAGCCGGAGGGAGAGCCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CAA 72 bp | CCTTTGTCCACCACTTTGCGCTCCAGCATCCAGCGGTaGAAAGATTCCCGGGGCGGCTCAATGCCCTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PLSTTLRSSIQR*KDSRGGSMPSR Trigger: GCGGGAGGGCATTGAGCCGCCCCGGGAATCTTTCAACCGCTGGATGCTGGAGCGCAAAGTGGTGGACAAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CAA 90 bp | GGATCACATCCTTTGTCCACCACTTTGCGCTCCAGCATCCAGCGGTaGAAAGATTCCCGGGGCGGCTCAATGCCCTCCCGCTGCTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GSHPLSTTLRSSIQR*KDSRGGSMPSRCWH Trigger: GTGCCAGCAGCGGGAGGGCATTGAGCCGCCCCGGGAATCTTTCAACCGCTGGATGCTGGAGCGCAAAGTGGTGGACAAAGGATGTGATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS TCA 72 bp | CTTTGTCCACCACTTTGCGCTCCAGCATCCAGCGGTTaGAAGATTCCCGGGGCGGCTCAATGCCCTCCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LCPPLCAPASSG*KIPGAAQCPPA Trigger: AGCGGGAGGGCATTGAGCCGCCCCGGGAATCTTTCAACCGCTGGATGCTGGAGCGCAAAGTGGTGGACAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CCA 72 bp | CGGTACTCGTGCTCAAAGGCAGGCAAGACCAGCTGGTaGCGTTTGAAGCGGCTCTGCTCCATCCTGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RYSCSKAGKTSW*RLKRLCSILVS Trigger: GCTCACCAGGATGGAGCAGAGCCGCTTCAAACGCCACCAGCTGGTCTTGCCTGCCTTTGAGCACGAGTACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CCA 72 bp | CTGCGGTACTCGTGCTCAAAGGCAGGCAAGACCAGCTaGTGGCGTTTGAAGCGGCTCTGCTCCATCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LRYSCSKAGKTS*WRLKRLCSILV Trigger: CACCAGGATGGAGCAGAGCCGCTTCAAACGCCACCAGCTGGTCTTGCCTGCCTTTGAGCACGAGTACCGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CAA 72 bp | TCGTGCTCAAAGGCAGGCAAGACCAGCTGGTGGCGTTaGAAGCGGCTCTGCTCCATCCTGGTGAGCGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SCSKAGKTSWWR*KRLCSILVSAG Trigger: ACCAGCGCTCACCAGGATGGAGCAGAGCCGCTTCAAACGCCACCAGCTGGTCTTGCCTGCCTTTGAGCACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS GCA 72 bp | GATCTTGCTGCAGATGCCTTCCACAGAGTCCTTGGCTaGAGCAGAGACATGGGGCCCACACTGCCTCCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: DLAADAFHRVLG*SRDMGPTLPPK Trigger: CTTCGGAGGCAGTGTGGGCCCCATGTCTCTGCTGCAGCCAAGGACTCTGTGGAAGGCATCTGCAGCAAGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS GCA 72 bp | CTTGGCGAACCCGGGGCCATTCTGCAGGAAGAGCACTaGCGTGTTGTGGACGGCCTTGTAGTGCATTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LGEPGAILQEEH*RVVDGLVVHFL Trigger: GAGGAAATGCACTACAAGGCCGTCCACAACACGGCAGTGCTCTTCCTGCAGAATGGCCCCGGGTTCGCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CCA 72 bp | GGTAGATCTTGCTGCAGATGCCTTCCACAGAGTCCTTaGCTGCAGCAGAGACATGGGGCCCACACTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GRSCCRCLPQSP*LQQRHGAHTAS Trigger: GGAGGCAGTGTGGGCCCCATGTCTCTGCTGCAGCCAAGGACTCTGTGGAAGGCATCTGCAGCAAGATCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CAA 72 bp | GGGTGTGGAGGCAGGACCTCTGAAGGACCCCTGTGCTaGATGACAGCATTGGTCTGGATGTCCAGGTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GCGGRTSEGPLC*MTALVWMSRSQ Trigger: CTGGGACCTGGACATCCAGACCAATGCTGTCATCAAGCACAGGGGTCCTTCAGAGGTCCTGCCTCCACACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CAA 90 bp | TGTGGAGGCAGGACCTCTGAAGGACCCCTGTGCTTGATGACAGCATaGGTCTGGATGTCCAGGTCCCAGTACACCTCAGTGGGTCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CGGRTSEGPLCLMTA*VWMSRSQYTSVGRR Trigger: CCTCCGACCCACTGAGGTGTACTGGGACCTGGACATCCAGACCAATGCTGTCATCAAGCACAGGGGTCCTTCAGAGGTCCTGCCTCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CCA 72 bp | TACCAGCTCCTCTGGAAGGTCCTGTACCAGGCGAACTaGCTTTGGAGAACAGGGCTGGCTCTGACTGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: YQLLWKVLYQAN*LWRTGLALTGG Trigger: ACCTCCAGTCAGAGCCAGCCCTGTTCTCCAAAGCCAGTTCGCCTGGTACAGGACCTTCCAGAGGAGCTGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CCA 72 bp | GGGGTTCCTGGGATGCTAGGGGAACTGGGCACTGACTaGCTTGTGGGTGTCACAGGGATTTCAATCTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GVPGMLGELGTD*LVGVTGISILG Trigger: GCCCAAGATTGAAATCCCTGTGACACCCACAAGCCAGTCAGTGCCCAGTTCCCCTAGCATCCCAGGAACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CAA 72 bp | ACCATAGCATCCATGAGCTCCTCGCAGAACGGAGGGTaGGCCTCAAAGGAACCACTCAGCGGGGTGAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TIASMSSSQNGG*ASKEPLSGVKS Trigger: GGACTTCACCCCGCTGAGTGGTTCCTTTGAGGCCAACCCTCCGTTCTGCGAGGAGCTCATGGATGCTATGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS GCA 72 bp | TGCACTCCTGGACTCAATGAGCCGCCTGGCAGCTTCTaGGTATTTAAAGAGCAGGCGTTTGGCTTCCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: CTPGLNEPPGSF*VFKEQAFGFLP Trigger: CGGGAGGAAGCCAAACGCCTGCTCTTTAAATACGCAGAAGCTGCCAGGCGGCTCATTGAGTCCAGGAGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS GCA 72 bp | GCATTTCCTCCTTCTTGCAGATGTGCTGGGAGCCACTaGGGTACTCGTGCTCAAAGGCAGGCAAGACCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AFPPSCRCAGSH*GTRAQRQARPA Trigger: AGCTGGTCTTGCCTGCCTTTGAGCACGAGTACCGCAGTGGCTCCCAGCACATCTGCAAGAAGGAGGAAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CCA 72 bp | GAGGCGAAGCACTCGAAACTGACACCAAAGAGTCGGTaGAGGGTCTCAAAGACATGCACTGGCAGTGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: EAKHSKLTPKSR*RVSKTCTGSDP Trigger: GGGGTCACTGCCAGTGCATGTCTTTGAGACCCTCCACCGACTCTTTGGTGTCAGTTTCGAGTGCTTCGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CAA 90 bp | TCAACATCAGGGTGTGGAGGCAGGACCTCTGAAGGACCCCTGTGCTaGATGACAGCATTGGTCTGGATGTCCAGGTCCCAGTACACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: STSGCGGRTSEGPLC*MTALVWMSRSQYTS Trigger: TGAGGTGTACTGGGACCTGGACATCCAGACCAATGCTGTCATCAAGCACAGGGGTCCTTCAGAGGTCCTGCCTCCACACCCTGATGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CAA 90 bp | TCACAGTTGCTTGGCAACAGAGGATCACATCCTTTGTCCACCACTTaGCGCTCCAGCATCCAGCGGTTGAAAGATTCCCGGGGCGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SQLLGNRGSHPLSTT*RSSIQRLKDSRGGS Trigger: TGAGCCGCCCCGGGAATCTTTCAACCGCTGGATGCTGGAGCGCAAAGTGGTGGACAAAGGATGTGATCCTCTGTTGCCAAGCAACTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS TCA 72 bp | GGGCTTCTTCACTCCGTTGCCACTTGGCTGCTCCTCTaGGAGCTGTCGCTTTCTGGACTTGTTCTCTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: GLLHSVATWLLL*ELSLSGLVLYW Trigger: CCAGTAGAGAACAAGTCCAGAAAGCGACAGCTCTCAGAGGAGCAGCCAAGTGGCAACGGAGTGAAGAAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS CAA 72 bp | AGGACCTCTGAAGGACCCCTGTGCTTGATGACAGCATaGGTCTGGATGTCCAGGTCCCAGTACACCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RTSEGPLCLMTA*VWMSRSQYTSV Trigger: CACTGAGGTGTACTGGGACCTGGACATCCAGACCAATGCTGTCATCAAGCACAGGGGTCCTTCAGAGGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS CAA 90 bp | GAGTGCTCTTTCCGCAGCCAGCTGAAGGTGTCCTCCACGTTCCATTaGACCACTTTTCTGCTGTCAGGGGATGCACTCCTGGACTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: ECSFRSQLKVSSTFH*TTFLLSGDALLDSM Trigger: CATTGAGTCCAGGAGTGCATCCCCTGACAGCAGAAAAGTGGTCAAATGGAACGTGGAGGACACCTTCAGCTGGCTGCGGAAAGAGCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS TCA 72 bp | CTCCGGGATGAACACGATGAAGGACAGGGGTTCTGCTaGGCTCTCCAGCAGTTTCTCGAAGTGAGAGACCAT | + |
|
Preference number: 6 (lower is better) Translates to: LRDEHDEGQGFC*ALQQFLEVRDH Trigger: ATGGTCTCTCACTTCGAGAAACTGCTGGAGAGCTCAGCAGAACCCCTGTCCTTCATCGTGTTCATCCCGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS CAA 72 bp | CTTGGCAACAGAGGATCACATCCTTTGTCCACCACTTaGCGCTCCAGCATCCAGCGGTTGAAAGATTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LGNRGSHPLSTT*RSSIQRLKDSR Trigger: CCGGGAATCTTTCAACCGCTGGATGCTGGAGCGCAAAGTGGTGGACAAAGGATGTGATCCTCTGTTGCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
||
| CDS CAA 72 bp | GGTTCACAGTTGCTTGGCAACAGAGGATCACATCCTTaGTCCACCACTTTGCGCTCCAGCATCCAGCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: GSQLLGNRGSHP*STTLRSSIQRL Trigger: CAACCGCTGGATGCTGGAGCGCAAAGTGGTGGACAAAGGATGTGATCCTCTGTTGCCAAGCAACTGTGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS TCA 72 bp | GGGTCGGAGGAGAGCTGCCTGTTTATCTTCAGTGGATaGACCCCAAATCTTCAGTGTTGGGGTTCCTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: GSEESCLFIFSG*TPNLQCWGSWD Trigger: ATCCCAGGAACCCCAACACTGAAGATTTGGGGTTCATCCACTGAAGATAAACAGGCAGCTCTCCTCCGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS GCA 72 bp | TCAATCTTGGGCTTCTTCACTCCGTTGCCACTTGGCTaGTCCTCTGAGAGCTGTCGCTTTCTGGACTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SILGFFTPLPLG*SSESCRFLDLF Trigger: GAACAAGTCCAGAAAGCGACAGCTCTCAGAGGAGCAGCCAAGTGGCAACGGAGTGAAGAAGCCCAAGATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS GCA 72 bp | TCACAGGGATTTCAATCTTGGGCTTCTTCACTCCGTTaGCACTTGGCTGCTCCTCTGAGAGCTGTCGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SQGFQSWASSLR*HLAAPLRAVAF Trigger: GAAAGCGACAGCTCTCAGAGGAGCAGCCAAGTGGCAACGGAGTGAAGAAGCCCAAGATTGAAATCCCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CCA 72 bp | CAGTGGGTCGGAGGAGAGCTGCCTGTTTATCTTCAGTaGATGAACCCCAAATCTTCAGTGTTGGGGTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: QWVGGELPVYLQ*MNPKSSVLGFL Trigger: CAGGAACCCCAACACTGAAGATTTGGGGTTCATCCACTGAAGATAAACAGGCAGCTCTCCTCCGACCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CAA 90 bp | GACACAACTGGTTCACAGTTGCTTGGCAACAGAGGATCACATCCTTaGTCCACCACTTTGCGCTCCAGCATCCAGCGGTTGAAAGATTCC | + |
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Preference number: 6 (lower is better) Translates to: DTTGSQLLGNRGSHP*STTLRSSIQRLKDS Trigger: GGAATCTTTCAACCGCTGGATGCTGGAGCGCAAAGTGGTGGACAAAGGATGTGATCCTCTGTTGCCAAGCAACTGTGAACCAGTTGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS GCA 72 bp | CACGAAACATGGATGGAGACACAACTGGTTCACAGTTaGTTGGCAACAGAGGATCACATCCTTTGTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: HETWMETQLVHS*LATEDHILCPP Trigger: TGGTGGACAAAGGATGTGATCCTCTGTTGCCAAGCAACTGTGAACCAGTTGTGTCTCCATCCATGTTTCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CAA 72 bp | TCACGAAACATGGATGGAGACACAACTGGTTCACAGTaGCTTGGCAACAGAGGATCACATCCTTTGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: SRNMDGDTTGSQ*LGNRGSHPLST Trigger: GGTGGACAAAGGATGTGATCCTCTGTTGCCAAGCAACTGTGAACCAGTTGTGTCTCCATCCATGTTTCGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CAA 90 bp | TTCATAATTTCACGAAACATGGATGGAGACACAACTGGTTCACAGTaGCTTGGCAACAGAGGATCACATCCTTTGTCCACCACTTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: FIISRNMDGDTTGSQ*LGNRGSHPLSTTLR Trigger: GCGCAAAGTGGTGGACAAAGGATGTGATCCTCTGTTGCCAAGCAACTGTGAACCAGTTGTGTCTCCATCCATGTTTCGTGAAATTATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CAA 90 bp | GCTTCTGCGTATTTAAAGAGCAGGCGTTTGGCTTCCTCCCGGAACTaGATTCGGGATAACCTGATGGGAATGTCATTCATAATTTCACGA | + |
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Preference number: 6 (lower is better) Translates to: ASAYLKSRRLASSRN*IRDNLMGMSFIISR Trigger: TCGTGAAATTATGAATGACATTCCCATCAGGTTATCCCGAATCAAGTTCCGGGAGGAAGCCAAACGCCTGCTCTTTAAATACGCAGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CCA 72 bp | AAACATGGATGGAGACACAACTGGTTCACAGTTGCTTaGCAACAGAGGATCACATCCTTTGTCCACCACTTT | + |
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Preference number: 6 (lower is better) Translates to: KHGWRHNWFTVA*QQRITSFVHHF Trigger: AAAGTGGTGGACAAAGGATGTGATCCTCTGTTGCCAAGCAACTGTGAACCAGTTGTGTCTCCATCCATGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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| CDS CAA 72 bp | TATTTAAAGAGCAGGCGTTTGGCTTCCTCCCGGAACTaGATTCGGGATAACCTGATGGGAATGTCATTCATA | + |
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Preference number: 6 (lower is better) Translates to: YLKSRRLASSRN*IRDNLMGMSFI Trigger: TATGAATGACATTCCCATCAGGTTATCCCGAATCAAGTTCCGGGAGGAAGCCAAACGCCTGCTCTTTAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041643.5 |
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