Pregenerated sensors for PCID2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038542Ensembl transcript IDs: ENSMUST00000164416.8, ENSMUST00000167198.2, ENSMUST00000168164.8, ENSMUST00000172443.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACCACAGTGAGTGCCTCAGGTGCTGGCGACTGCACCAGGAGATGTaGGCTCCAGCGGGCAGCGGTAGCAGGAGCACGCTGTTGGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: NHSECLRCWRLHQEM*APAGSGSRSTLLAR Trigger: CCTTGCCAACAGCGTGCTCCTGCTACCGCTGCCCGCTGGAGCTCACATCTCCTGGTGCAGTCGCCAGCACCTGAGGCACTCACTGTGGTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR GCA 90 bp | AAGGAAGAGGAGGAGGAAGGAAGAGGGAGAGCTGGCCGTACCCAGTaGTGCGGGATGCACTGTGCCCAGAACCCTCTGCTGAAGCCCACC | + |
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Preference number: 1 (lower is better) Translates to: KEEEEEGRGRAGRTQ*CGMHCAQNPLLKPT Trigger: GGTGGGCTTCAGCAGAGGGTTCTGGGCACAGTGCATCCCGCAGCACTGGGTACGGCCAGCTCTCCCTCTTCCTTCCTCCTCCTCTTCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR TCA 90 bp | GAGGAAGGGTCTCTGGAAGGGGCTAAGCTGGATGAAGCTGCAGGGTaGGGGCCCGACAGGACAGTGGCTATAGGAAACGGAAGCGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: EEGSLEGAKLDEAAG*GPDRTVAIGNGSEA Trigger: TGCCTCGCTTCCGTTTCCTATAGCCACTGTCCTGTCGGGCCCTCACCCTGCAGCTTCATCCAGCTTAGCCCCTTCCAGAGACCCTTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR GCA 90 bp | CAGGATGAGGAAGATGCCACAGCGGATGAAGAACGTCTCGTGCTTTaGCAGCGCCTCATTGAGCAGCAGCAGGTTGCCCTCACTGACGGC | + |
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Preference number: 1 (lower is better) Translates to: QDEEDATADEERLVL*QRLIEQQQVALTDG Trigger: GCCGTCAGTGAGGGCAACCTGCTGCTGCTCAATGAGGCGCTGGCAAAGCACGAGACGTTCTTCATCCGCTGTGGCATCTTCCTCATCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
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| 3UTR TCA 90 bp | AGGTCTTGGCAAGGCTGGCATGAGTTAGGACACTGGAAACCACAGTaGGTGCCTCAGGTGCTGGCGACTGCACCAGGAGATGTGAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: RSWQGWHELGHWKPQ*VPQVLATAPGDVSS Trigger: GGAGCTCACATCTCCTGGTGCAGTCGCCAGCACCTGAGGCACTCACTGTGGTTTCCAGTGTCCTAACTCATGCCAGCCTTGCCAAGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR CCA 90 bp | TCCTTCCCGGACGCTCAGGAGCACCACAGGCCAGCAGCAGGGTGTTaGTCCATCTTGAAAAAGAACTCCAGGTCTTGGCAAGGCTGGCAT | + |
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Preference number: 1 (lower is better) Translates to: SFPDAQEHHRPAAGC*SILKKNSRSWQGWH Trigger: ATGCCAGCCTTGCCAAGACCTGGAGTTCTTTTTCAAGATGGACCAACACCCTGCTGCTGGCCTGTGGTGCTCCTGAGCGTCCGGGAAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR CCA 90 bp | GCTGTGAGCTGCCATATGGGTGCCAGGAATCAAACACACATCCTCTaGCAGAGCAGTAGCTGTTCTCGCCTGAACCGTCTCTCCTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: AVSCHMGARNQTHIL*QSSSCSRLNRLSSP Trigger: GGGGGAGGAGAGACGGTTCAGGCGAGAACAGCTACTGCTCTGCCAGAGGATGTGTGTTTGATTCCTGGCACCCATATGGCAGCTCACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR GCA 90 bp | TTCTCCAGGATGAGGAAGATGCCACAGCGGATGAAGAACGTCTCGTaGTTTGCCAGCGCCTCATTGAGCAGCAGCAGGTTGCCCTCACTG | + |
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Preference number: 1 (lower is better) Translates to: FSRMRKMPQRMKNVS*FASASLSSSRLPSL Trigger: CAGTGAGGGCAACCTGCTGCTGCTCAATGAGGCGCTGGCAAAGCACGAGACGTTCTTCATCCGCTGTGGCATCTTCCTCATCCTGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
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| 3UTR GCA 90 bp | ACGAAGGCAATGGGTCCCCTAGAACTGGAGTTAGAGGCTGTGAGCTaGCATATGGGTGCCAGGAATCAAACACACATCCTCTGGCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: TKAMGPLELELEAVS*HMGARNQTHILWQS Trigger: GCTCTGCCAGAGGATGTGTGTTTGATTCCTGGCACCCATATGGCAGCTCACAGCCTCTAACTCCAGTTCTAGGGGACCCATTGCCTTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR TCA 90 bp | ATTGAGCAGCAGCAGGTTGCCCTCACTGACGGCTTTGGTCACTTCTaGAAACTGCATCAGGTGGTATTTCCTCAGGAGCTCGATGGTCGG | + |
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Preference number: 1 (lower is better) Translates to: IEQQQVALTDGFGHF*KLHQVVFPQELDGR Trigger: CCGACCATCGAGCTCCTGAGGAAATACCACCTGATGCAGTTTTCAGAAGTGACCAAAGCCGTCAGTGAGGGCAACCTGCTGCTGCTCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
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| 3UTR TCA 90 bp | CCAGAATGCACTGGACCTCGTCAATGTCCACGTCTTCCACGTGCATaGACTTCAAAGCGACCAGAAAGGCGTCTAGGGACAGCTGATGTG | + |
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Preference number: 1 (lower is better) Translates to: PECTGPRQCPRLPRA*TSKRPERRLGTADV Trigger: CACATCAGCTGTCCCTAGACGCCTTTCTGGTCGCTTTGAAGTTCATGCACGTGGAAGACGTGGACATTGACGAGGTCCAGTGCATTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
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| 3UTR GCA 90 bp | GAAGTCGTGATTCCCCACAGCATAGGTACACTCTGTCTAGGTTCCTaGTGGAAGCCAGATTCGGCTCATCACCAGATCTGGAACCTCACT | + |
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Preference number: 1 (lower is better) Translates to: EVVIPHSIGTLCLGS*WKPDSAHHQIWNLT Trigger: AGTGAGGTTCCAGATCTGGTGATGAGCCGAATCTGGCTTCCAGCAGGAACCTAGACAGAGTGTACCTATGCTGTGGGGAATCACGACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167198.2 |
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| 3UTR CCA 90 bp | TCACTTCTGAAAACTGCATCAGGTGGTATTTCCTCAGGAGCTCGATaGTCGGCATGTGACCCAGCAGCATCTTCACTGGCAGCAGGTAGA | + |
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Preference number: 1 (lower is better) Translates to: SLLKTASGGISSGAR*SACDPAASSLAAGR Trigger: TCTACCTGCTGCCAGTGAAGATGCTGCTGGGTCACATGCCGACCATCGAGCTCCTGAGGAAATACCACCTGATGCAGTTTTCAGAAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
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| 3UTR TCA 90 bp | AGTCACTGTCAAACATGGCCTTGCGCCCCACGTAGTACTTGTACGTaGTCCTCTGCGCTGTGCTATAGTCATCTTTCAGATTCGAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: SHCQTWPCAPRSTCT*SSALCYSHLSDSSC Trigger: ACAGCTCGAATCTGAAAGATGACTATAGCACAGCGCAGAGGATCACGTACAAGTACTACGTGGGGCGCAAGGCCATGTTTGACAGTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167198.2 ENSMUST00000168164.8 |
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| 3UTR TCA 90 bp | GGAGGAATGATTGGACTATCACCGTCTGGCACTTGTACGCTTCTATaGAGTCGTGATTCCCCACAGCATAGGTACACTCTGTCTAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: GGMIGLSPSGTCTLL*SRDSPQHRYTLSRF Trigger: GAACCTAGACAGAGTGTACCTATGCTGTGGGGAATCACGACTTCATAGAAGCGTACAAGTGCCAGACGGTGATAGTCCAATCATTCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167198.2 |
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| 3UTR GCA 90 bp | CTGCTGGTCTGCATTATTGGCAAATATCCGAAGGTCAAGTGCTACTaGATACATGACAGGCAGAGCCCAGTTTTCCTCTTTGTGAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: LLVCIIGKYPKVKCY*IHDRQSPVFLFVSL Trigger: CAGGCTCACAAAGAGGAAAACTGGGCTCTGCCTGTCATGTATGCAGTAGCACTTGACCTTCGGATATTTGCCAATAATGCAGACCAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167198.2 |
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| 3UTR GCA 90 bp | TACCAACTGCTGGTCTGCATTATTGGCAAATATCCGAAGGTCAAGTaGTACTGCATACATGACAGGCAGAGCCCAGTTTTCCTCTTTGTG | + |
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Preference number: 1 (lower is better) Translates to: YQLLVCIIGKYPKVK*YCIHDRQSPVFLFV Trigger: CACAAAGAGGAAAACTGGGCTCTGCCTGTCATGTATGCAGTAGCACTTGACCTTCGGATATTTGCCAATAATGCAGACCAGCAGTTGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167198.2 |
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| 3UTR TCA 90 bp | ACGTGCATGAACTTCAAAGCGACCAGAAAGGCGTCTAGGGACAGCTaGTGTGTCTTGAGTAACAAATACACTTTCTTGAAGAGGTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: TCMNFKATRKASRDS*CVLSNKYTFLKRFL Trigger: CAGGAACCTCTTCAAGAAAGTGTATTTGTTACTCAAGACACATCAGCTGTCCCTAGACGCCTTTCTGGTCGCTTTGAAGTTCATGCACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
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| 3UTR-3UTR TCA 90 bp | CGACAGGACAGTGGCTATAGGAAACGGAAGCGAGGCAGAGGAAAGGCTCAGAAGCTGCACCAGGAGATGTaGGCTCCAGCGGGCAGCGGT | + |
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Preference number: 2 (lower is better) Translates to: RQDSGYRKRKRGRGKAQKLHQEM*APAGSG Trigger: ACCGCTGCCCGCTGGAGCTCACATCTCCTGGTGCAG...CTTCTGAGCCTTTCCTCTGCCTCGCTTCCGTTTCCTATAGCCACTGTCCTGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR CAA 90 bp | ATGCCACAGCGGATGAAGAACGTCTCGTGCTTTGCCAGCGCCTCATaGAGCAGCAGCAGGTTGCCCTCACTGACGGCTTTGGTCACTTCT | + |
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Preference number: 2 (lower is better) Translates to: MPQRMKNVSCFASAS*SSSRLPSLTALVTS Trigger: AGAAGTGACCAAAGCCGTCAGTGAGGGCAACCTGCTGCTGCTCAATGAGGCGCTGGCAAAGCACGAGACGTTCTTCATCCGCTGTGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGCCAGAATGCACTGGACCTCGTCAATGTCCACGTCTTCCACGTGCATGAACTTGCCAGCGCCTCATTaGGCAGCAGCAGGTTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LARMHWTSSMSTSSTCMNLPAPH*AAAGCP Trigger: AGGGCAACCTGCTGCTGCTCAATGAGGCGCTGGCAA...GTTCATGCACGTGGAAGACGTGGACATTGACGAGGTCCAGTGCATTCTGGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGCACACTGTGGACAGCGGAGGGAAAGGGTTCTGCTTGCTGACGACCAGTTTGGAAACCACAGTGAGTaGCTCAGGTGCTGGCGACTG | + |
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Preference number: 2 (lower is better) Translates to: SAHCGQRRERVLLADDQFGNHSE*LRCWRL Trigger: CAGTCGCCAGCACCTGAGGCACTCACTGTGGTTTCC...AAACTGGTCGTCAGCAAGCAGAACCCTTTCCCTCCGCTGTCCACAGTGTGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCCAGCTGTCTCCTTCCCGGACGCTCAGGAGCACCACAGGCCAGCAGCAGGGGTATTTATTTATGTATaGATGCCTGTTTGCCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SPAVSFPDAQEHHRPAAGVFIYV*MPVCLS Trigger: ACTCAGGCAAACAGGCATGCATACATAAATAAATAC...CCCTGCTGCTGGCCTGTGGTGCTCCTGAGCGTCCGGGAAGGAGACAGCTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGCACACTGTGGACAGCGGAGGGAAAGGGTTCTGCTTGCTGACGACCAGTTTTCCACGTCTTCCACGTaGATGAACTTCAAAGCGACC | + |
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Preference number: 2 (lower is better) Translates to: SAHCGQRRERVLLADDQFSTSST*MNFKAT Trigger: GGTCGCTTTGAAGTTCATGCACGTGGAAGACGTGGA...AAACTGGTCGTCAGCAAGCAGAACCCTTTCCCTCCGCTGTCCACAGTGTGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
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| 3UTR-3UTR CCA 90 bp | GCAATGGGTCCCCTAGAACTGGAGTTAGAGGCTGTGAGCTGCCATATGGGTGCCCAAACACACATCCTCTaGCAGAGCAGTAGCTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: AMGPLELELEAVSCHMGAQTHIL*QSSSCS Trigger: AGAACAGCTACTGCTCTGCCAGAGGATGTGTGTTTG...GGCACCCATATGGCAGCTCACAGCCTCTAACTCCAGTTCTAGGGGACCCATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR-3UTR TCA 90 bp | GCAATGGGTCCCCTAGAACTGGAGTTAGAGGCTGTGAGCTGCCATATGGGTGCCGGTGTTGGTCCATCTTaGAAAAGAACTCCAGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: AMGPLELELEAVSCHMGAGVGPS*KRTPGL Trigger: AAGACCTGGAGTTCTTTTTCAAGATGGACCAACACC...GGCACCCATATGGCAGCTCACAGCCTCTAACTCCAGTTCTAGGGGACCCATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGACTCGGAAGCAGCTCATCAGCAGCTCGGCAGCTTTTTCCAGCATGTCTCCACTTGTACGCTTCTATaGAGTCGTGATTCCCCACAG | + |
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Preference number: 2 (lower is better) Translates to: TDSEAAHQQLGSFFQHVSTCTLL*SRDSPQ Trigger: CTGTGGGGAATCACGACTTCATAGAAGCGTACAAGT...GGAGACATGCTGGAAAAAGCTGCCGAGCTGCTGATGAGCTGCTTCCGAGTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167198.2 |
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| 3UTR-3UTR CCA 90 bp | CACAAAGGTAGCCTCCATAAACAAACCGAAGCCCAGCTGTCTCCTTCCCGGACGAAGAACTCCAGGTCTTaGCAAGGCTGGCATGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: HKGSLHKQTEAQLSPSRTKNSRS*QGWHEL Trigger: TAACTCATGCCAGCCTTGCCAAGACCTGGAGTTCTT...CGTCCGGGAAGGAGACAGCTGGGCTTCGGTTTGTTTATGGAGGCTACCTTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAGAGAGAGAGAGAGGAGGGAGGGAGGAAACCCTACAAGATGTCACAAAGGTAAGGGTTCTGCTTGCTaGCGACCAGTTTCTGATGCT | + |
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Preference number: 2 (lower is better) Translates to: ERERERREGGNPTRCHKGKGSAC*RPVSDA Trigger: AGCATCAGAAACTGGTCGTCAGCAAGCAGAACCCTT...ACCTTTGTGACATCTTGTAGGGTTTCCTCCCTCCCTCCTCTCTCTCTCTCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGGAAACCCTACAAGATGTCACAAAGGTAGCCTCCATAAACAAACCGAAGGGAAACCACAGTGAGTaGCTCAGGTGCTGGCGACTG | + |
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Preference number: 2 (lower is better) Translates to: REETLQDVTKVASINKPKGNHSE*LRCWRL Trigger: CAGTCGCCAGCACCTGAGGCACTCACTGTGGTTTCC...CTTCGGTTTGTTTATGGAGGCTACCTTTGTGACATCTTGTAGGGTTTCCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAGAGAGAGAGAGGAGGGAGGGAGGAAACCCTACAAGATGTCACAAAGGTTTAGAGGCTGTGAGCTaGCATATGGGTGCCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: ERERERREGGNPTRCHKGLEAVS*HMGARN Trigger: ATTCCTGGCACCCATATGGCAGCTCACAGCCTCTAA...ACCTTTGTGACATCTTGTAGGGTTTCCTCCCTCCCTCCTCTCTCTCTCTCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR CAA 90 bp | GGTGTATTTATTTATGTATGCATGCCTGTTTGCCTGAGTGAGCTTTaGTACACGTGTGCAGGAGCCCGTGGAGGCCAACGAAGGCAATGG | + |
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Preference number: 2 (lower is better) Translates to: GVFIYVCMPVCLSEL*YTCAGARGGQRRQW Trigger: CCATTGCCTTCGTTGGCCTCCACGGGCTCCTGCACACGTGTACAAAAGCTCACTCAGGCAAACAGGCATGCATACATAAATAAATACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR-3UTR CCA 90 bp | AATCAAACACACATCCTCTGGCAGAGCAGTAGCTGTTCTCGCCTGAACCGTCTCAAGAACTCCAGGTCTTaGCAAGGCTGGCATGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: NQTHILWQSSSCSRLNRLKNSRS*QGWHEL Trigger: TAACTCATGCCAGCCTTGCCAAGACCTGGAGTTCTT...GAGACGGTTCAGGCGAGAACAGCTACTGCTCTGCCAGAGGATGTGTGTTTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAGAGAGAGAGAGAGGAGGGAGGGAGGAAACCCTACAAGATGTCACAAAGGTCCGAGCTCACAATGCTaGCATTTTGCATATGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: ERERERREGGNPTRCHKGPSSQC*HFAYEN Trigger: GTTTTCATATGCAAAATGTCAGCATTGTGAGCTCGG...ACCTTTGTGACATCTTGTAGGGTTTCCTCCCTCCCTCCTCTCTCTCTCTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGAGGGAGGGAGGAAACCCTACAAGATGTCACAAAGGTAGCCTCCATAAACGTATGCATGCCTGTTTaGCTGAGTGAGCTTTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: RGGREETLQDVTKVASINVCMPV*LSELLY Trigger: GTACAAAAGCTCACTCAGGCAAACAGGCATGCATAC...GTTTATGGAGGCTACCTTTGTGACATCTTGTAGGGTTTCCTCCCTCCCTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR-3UTR GCA 90 bp | ACTTGTATAAACTTGGGTTACCTTTTTAAGAAAGAGAGAGAGAGAGAGAGAAAGGGCCGTACCCAGTGCTaGGGGATGCACTGTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: TCINLGYLFKKERERERKGRTQC*GMHCAQ Trigger: CTGGGCACAGTGCATCCCGCAGCACTGGGTACGGCC...CTTTCTCTCTCTCTCTCTCTCTTTCTTAAAAAGGTAACCCAAGTTTATACAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGTCACTGTCAAACATGGCCTTGCGCCCCACGTAGTACTTGTACGTGATCCTCCTTTCTTTACCAACTaGTGGTCTGCATTATTGGCA | + |
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Preference number: 2 (lower is better) Translates to: EVTVKHGLAPHVVLVRDPPFFTN*WSALLA Trigger: TGCCAATAATGCAGACCAGCAGTTGGTAAAGAAAGG...AGGATCACGTACAAGTACTACGTGGGGCGCAAGGCCATGTTTGACAGTGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167198.2 ENSMUST00000168164.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCCTTTCTTTACCAACTGCTGGTCTGCATTATTGGCAAATATCCGAAGGTCTCTGTCTAGGTTCCTaGTGGAAGCCAGATTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: SSLSLPTAGLHYWQISEGLCLGS*WKPDSA Trigger: AGCCGAATCTGGCTTCCAGCAGGAACCTAGACAGAG...ACCTTCGGATATTTGCCAATAATGCAGACCAGCAGTTGGTAAAGAAAGGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167198.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTGTATAAACTTGGGTTACCTTTTTAAGAAAGAGAGAGAGAGAGAGAGAAAGTTCTTTACCAACTGCTaGTCTGCATTATTGGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: TCINLGYLFKKERERERKFFTNC*SALLAN Trigger: ATTTGCCAATAATGCAGACCAGCAGTTGGTAAAGAA...CTTTCTCTCTCTCTCTCTCTCTTTCTTAAAAAGGTAACCCAAGTTTATACAAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
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| 3UTR GCA 72 bp | GAGGAGGAAGGAAGAGGGAGAGCTGGCCGTACCCAGTaGTGCGGGATGCACTGTGCCCAGAACCCTCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: EEEGRGRAGRTQ*CGMHCAQNPLL Trigger: CAGCAGAGGGTTCTGGGCACAGTGCATCCCGCAGCACTGGGTACGGCCAGCTCTCCCTCTTCCTTCCTCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR-3UTR CAA 90 bp | TGGCCGTACCCAGTGCTGCGGGATGCACTGTGCCCAGAACCCTCTGCTGAAGCCTTGAGCAGCAGCAGGTaGCCCTCACTGACGGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: WPYPVLRDALCPEPSAEALSSSR*PSLTAL Trigger: CAAAGCCGTCAGTGAGGGCAACCTGCTGCTGCTCAA...GGCTTCAGCAGAGGGTTCTGGGCACAGTGCATCCCGCAGCACTGGGTACGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
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| 3UTR GCA 72 bp | GAGGAAGGAAGAGGGAGAGCTGGCCGTACCCAGTGCTaGGGGATGCACTGTGCCCAGAACCCTCTGCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: EEGRGRAGRTQC*GMHCAQNPLLK Trigger: CTTCAGCAGAGGGTTCTGGGCACAGTGCATCCCGCAGCACTGGGTACGGCCAGCTCTCCCTCTTCCTTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR TCA 72 bp | AGCACCACAGGCCAGCAGCAGGGTGTTGGTCCATCTTaGAAAAGAACTCCAGGTCTTGGCAAGGCTGGCATG | + |
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Preference number: 3 (lower is better) Translates to: STTGQQQGVGPS*KRTPGLGKAGM Trigger: CATGCCAGCCTTGCCAAGACCTGGAGTTCTTTTTCAAGATGGACCAACACCCTGCTGCTGGCCTGTGGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR GCA 72 bp | ATGAGGAAGATGCCACAGCGGATGAAGAACGTCTCGTaGTTTGCCAGCGCCTCATTGAGCAGCAGCAGGTTG | + |
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Preference number: 3 (lower is better) Translates to: MRKMPQRMKNVS*FASASLSSSRL Trigger: CAACCTGCTGCTGCTCAATGAGGCGCTGGCAAAGCACGAGACGTTCTTCATCCGCTGTGGCATCTTCCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
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| 3UTR CCA 72 bp | GACGCTCAGGAGCACCACAGGCCAGCAGCAGGGTGTTaGTCCATCTTGAAAAAGAACTCCAGGTCTTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: DAQEHHRPAAGC*SILKKNSRSWQ Trigger: TTGCCAAGACCTGGAGTTCTTTTTCAAGATGGACCAACACCCTGCTGCTGGCCTGTGGTGCTCCTGAGCGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| 3UTR TCA 72 bp | ACACTGTGGACAGCGGAGGGAAAGGGTTCTGCTTGCTaGCGACCAGTTTCTGATGCTGATGGGAGATGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: TLWTAEGKGSAC*RPVSDADGRCS Trigger: GCTACATCTCCCATCAGCATCAGAAACTGGTCGTCAGCAAGCAGAACCCTTTCCCTCCGCTGTCCACAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
||
| 3UTR GCA 72 bp | CAGTGTTCAAAGGCAAACGACAGGTACTCCTCCGCTTaGTTGAAGTCACTGTCAAACATGGCCTTGCGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: QCSKANDRYSSA*LKSLSNMALRP Trigger: GGGGCGCAAGGCCATGTTTGACAGTGACTTCAAGCAAGCGGAGGAGTACCTGTCGTTTGCCTTTGAACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
||
| 3UTR CCA 72 bp | TGCCATATGGGTGCCAGGAATCAAACACACATCCTCTaGCAGAGCAGTAGCTGTTCTCGCCTGAACCGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: CHMGARNQTHIL*QSSSCSRLNRL Trigger: GAGACGGTTCAGGCGAGAACAGCTACTGCTCTGCCAGAGGATGTGTGTTTGATTCCTGGCACCCATATGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGACTCGGAAGCAGCTCATCAGCAGCTCGGCAGCTTTTTCCAGCATGTCTCCATCACCGTCTGGCACTaGTACGCTTCTATGAAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: TDSEAAHQQLGSFFQHVSITVWH*YASMKS Trigger: CGACTTCATAGAAGCGTACAAGTGCCAGACGGTGAT...GGAGACATGCTGGAAAAAGCTGCCGAGCTGCTGATGAGCTGCTTCCGAGTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167198.2 |
||
| 3UTR TCA 72 bp | ACTGGACCTCGTCAATGTCCACGTCTTCCACGTGCATaGACTTCAAAGCGACCAGAAAGGCGTCTAGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: TGPRQCPRLPRA*TSKRPERRLGT Trigger: TGTCCCTAGACGCCTTTCTGGTCGCTTTGAAGTTCATGCACGTGGAAGACGTGGACATTGACGAGGTCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
||
| 3UTR GCA 72 bp | AGAACTGGAGTTAGAGGCTGTGAGCTGCCATATGGGTaGCAGGAATCAAACACACATCCTCTGGCAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RTGVRGCELPYG*QESNTHPLAEQ Trigger: CTGCTCTGCCAGAGGATGTGTGTTTGATTCCTGGCACCCATATGGCAGCTCACAGCCTCTAACTCCAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
||
| 3UTR GCA 72 bp | ATGGGTCCCCTAGAACTGGAGTTAGAGGCTGTGAGCTaGCATATGGGTGCCAGGAATCAAACACACATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: MGPLELELEAVS*HMGARNQTHIL Trigger: GAGGATGTGTGTTTGATTCCTGGCACCCATATGGCAGCTCACAGCCTCTAACTCCAGTTCTAGGGGACCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
||
| 3UTR GCA 72 bp | ATTCCCCACAGCATAGGTACACTCTGTCTAGGTTCCTaGTGGAAGCCAGATTCGGCTCATCACCAGATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: IPHSIGTLCLGS*WKPDSAHHQIW Trigger: CCAGATCTGGTGATGAGCCGAATCTGGCTTCCAGCAGGAACCTAGACAGAGTGTACCTATGCTGTGGGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167198.2 |
||
| 3UTR GCA 72 bp | ATGCACTGGACCTCGTCAATGTCCACGTCTTCCACGTaGATGAACTTCAAAGCGACCAGAAAGGCGTCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: MHWTSSMSTSST*MNFKATRKASR Trigger: CCTAGACGCCTTTCTGGTCGCTTTGAAGTTCATGCACGTGGAAGACGTGGACATTGACGAGGTCCAGTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
||
| 3UTR CCA 72 bp | AAAACTGCATCAGGTGGTATTTCCTCAGGAGCTCGATaGTCGGCATGTGACCCAGCAGCATCTTCACTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KTASGGISSGAR*SACDPAASSLA Trigger: TGCCAGTGAAGATGCTGCTGGGTCACATGCCGACCATCGAGCTCCTGAGGAAATACCACCTGATGCAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
||
| 3UTR TCA 72 bp | GCATACATGACAGGCAGAGCCCAGTTTTCCTCTTTGTaGGCCTGGAATGCCCGGAGGAATGATTGGACTATC | + |
|
Preference number: 3 (lower is better) Translates to: AYMTGRAQFSSL*AWNARRNDWTI Trigger: GATAGTCCAATCATTCCTCCGGGCATTCCAGGCTCACAAAGAGGAAAACTGGGCTCTGCCTGTCATGTATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167198.2 |
||
| 3UTR CCA 72 bp | CTCGATGGTCGGCATGTGACCCAGCAGCATCTTCACTaGCAGCAGGTAGATCAGAATCATCCTCTTGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LDGRHVTQQHLH*QQVDQNHPLVL Trigger: AAGAACAAGAGGATGATTCTGATCTACCTGCTGCCAGTGAAGATGCTGCTGGGTCACATGCCGACCATCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
||
| 3UTR TCA 72 bp | CTTGAAAAAGAACTCCAGGTCTTGGCAAGGCTGGCATaGGTTAGGACACTGGAAACCACAGTGAGTGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LEKELQVLARLA*VRTLETTVSAS Trigger: TGAGGCACTCACTGTGGTTTCCAGTGTCCTAACTCATGCCAGCCTTGCCAAGACCTGGAGTTCTTTTTCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
||
| 3UTR CCA 72 bp | GGGTGTTGGTCCATCTTGAAAAAGAACTCCAGGTCTTaGCAAGGCTGGCATGAGTTAGGACACTGGAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: GCWSILKKNSRS*QGWHELGHWKP Trigger: TGGTTTCCAGTGTCCTAACTCATGCCAGCCTTGCCAAGACCTGGAGTTCTTTTTCAAGATGGACCAACACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
||
| 3UTR TCA 72 bp | ATTGGACTATCACCGTCTGGCACTTGTACGCTTCTATaGAGTCGTGATTCCCCACAGCATAGGTACACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: IGLSPSGTCTLL*SRDSPQHRYTL Trigger: CAGAGTGTACCTATGCTGTGGGGAATCACGACTTCATAGAAGCGTACAAGTGCCAGACGGTGATAGTCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167198.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTGCTTGCTGACGACCAGTTTCTGATGCTGATGGGAGATGTAGCCTTTAATGGGTGTTGGTCCATCTaGAAAAAGAACTCCAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VLLADDQFLMLMGDVAFNGCWSI*KKNSRS Trigger: AGACCTGGAGTTCTTTTTCAAGATGGACCAACACCC...ATTAAAGGCTACATCTCCCATCAGCATCAGAAACTGGTCGTCAGCAAGCAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGCTGACGACCAGTTTCTGATGCTGATGGGAGATGTAGCCTTTAATGTGACCCACAATGCTGACATTTaGCATATGAAAACAGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: LADDQFLMLMGDVAFNVTHNADI*HMKTDV Trigger: CACATCTGTTTTCATATGCAAAATGTCAGCATTGTG...GGTCACATTAAAGGCTACATCTCCCATCAGCATCAGAAACTGGTCGTCAGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
||
| 3UTR TCA 72 bp | AACTTCAAAGCGACCAGAAAGGCGTCTAGGGACAGCTaGTGTGTCTTGAGTAACAAATACACTTTCTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: NFKATRKASRDS*CVLSNKYTFLK Trigger: CTTCAAGAAAGTGTATTTGTTACTCAAGACACATCAGCTGTCCCTAGACGCCTTTCTGGTCGCTTTGAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTTGTATAAACTTGGGTTACCTTTTTAAGAAAGAGAGAGAGAGAGAGAGAAAGGGGTGTTGGTCCATCTaGAAAAAGAACTCCAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TCINLGYLFKKERERERKGCWSI*KKNSRS Trigger: AGACCTGGAGTTCTTTTTCAAGATGGACCAACACCC...CTTTCTCTCTCTCTCTCTCTCTTTCTTAAAAAGGTAACCCAAGTTTATACAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
||
| 3UTR TCA 72 bp | CAGCATTCCGAGCTCACAATGCTGACATTTTGCATATaGAAACAGATGTGTTACATAACAGACAGTAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QHSELTMLTFCI*KQMCYITDSKE Trigger: TTCTTTACTGTCTGTTATGTAACACATCTGTTTTCATATGCAAAATGTCAGCATTGTGAGCTCGGAATGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
||
| CDS-3UTR TCA 90 bp | GGGCCCGACAGGACAGTGGCTATAGGAAACGGAAGCGAGGCAGAGGAAAGGCTCTTGCCAGCGCCTCATTaGGCAGCAGCAGGTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPDRTVAIGNGSEAEERLLPAPH*AAAGCP Trigger: AGGGCAACCTGCTGCTGCTCAATGAGGCGCTGGCAA...GAGCCTTTCCTCTGCCTCGCTTCCGTTTCCTATAGCCACTGTCCTGTCGGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR TCA 90 bp | TGTGAGCTCCAGCGGGCAGCGGTAGCAGGAGCACGCTGTTGGCAAGGCCTGGGCACTTGTACGCTTCTATaGAGTCGTGATTCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CELQRAAVAGARCWQGLGTCTLL*SRDSPQ Trigger: CTGTGGGGAATCACGACTTCATAGAAGCGTACAAGT...GCCCAGGCCTTGCCAACAGCGTGCTCCTGCTACCGCTGCCCGCTGGAGCTCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTGTCTCCTTCCCGGACGCTCAGGAGCACCACAGGCCAGCAGCAGGGTGTCTTGTTCTTCTGGCTaGAGCGATGGCAGTGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PSCLLPGRSGAPQASSRVSCSSG*SDGSVQ Trigger: TTGAACACTGCCATCGCTCCAGCCAGAAGAACAAGA...CACCCTGCTGCTGGCCTGTGGTGCTCCTGAGCGTCCGGGAAGGAGACAGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTGTCTCCTTCCCGGACGCTCAGGAGCACCACAGGCCAGCAGCAGGGTGGAAAACTGCATCAGGTaGTATTTCCTCAGGAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PSCLLPGRSGAPQASSRVENCIR*YFLRSS Trigger: CGAGCTCCTGAGGAAATACCACCTGATGCAGTTTTC...CACCCTGCTGCTGGCCTGTGGTGCTCCTGAGCGTCCGGGAAGGAGACAGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| 3UTR CAA 72 bp | CGGATGAAGAACGTCTCGTGCTTTGCCAGCGCCTCATaGAGCAGCAGCAGGTTGCCCTCACTGACGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RMKNVSCFASAS*SSSRLPSLTAL Trigger: CAAAGCCGTCAGTGAGGGCAACCTGCTGCTGCTCAATGAGGCGCTGGCAAAGCACGAGACGTTCTTCATCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCCGACAGGACAGTGGCTATAGGAAACGGAAGCGAGGCAGAGGAAAGGCTCTCCACGTCTTCCACGTaGATGAACTTCAAAGCGACC | + |
|
Preference number: 4 (lower is better) Translates to: GPDRTVAIGNGSEAEERLSTSST*MNFKAT Trigger: GGTCGCTTTGAAGTTCATGCACGTGGAAGACGTGGA...GAGCCTTTCCTCTGCCTCGCTTCCGTTTCCTATAGCCACTGTCCTGTCGGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR CCA 90 bp | GCACCACAGGCCAGCAGCAGGGTGTTGGTCCATCTTGAAAAAGAACTCCAGGTCTCCTCAGGAGCTCGATaGTCGGCATGTGACCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: APQASSRVLVHLEKELQVSSGAR*SACDPA Trigger: TGCTGGGTCACATGCCGACCATCGAGCTCCTGAGGA...GACCTGGAGTTCTTTTTCAAGATGGACCAACACCCTGCTGCTGGCCTGTGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCGTACCCAGTGCTGCGGGATGCACTGTGCCCAGAACCCTCTGCTGAAGCCCCATGTATATCAAGTTaGCCAGAATGCACTGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: WPYPVLRDALCPEPSAEAPCISS*PECTGP Trigger: AGGTCCAGTGCATTCTGGCCAACTTGATATACATGG...GGCTTCAGCAGAGGGTTCTGGGCACAGTGCATCCCGCAGCACTGGGTACGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| 3UTR CAA 72 bp | GGACGCTCAGGAGCACCACAGGCCAGCAGCAGGGTGTaGGTCCATCTTGAAAAAGAACTCCAGGTCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRSGAPQASSRV*VHLEKELQVLA Trigger: TGCCAAGACCTGGAGTTCTTTTTCAAGATGGACCAACACCCTGCTGCTGGCCTGTGGTGCTCCTGAGCGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
||
| CDS-3UTR TCA 90 bp | GCACCACAGGCCAGCAGCAGGGTGTTGGTCCATCTTGAAAAAGAACTCCAGGTCTCGATGGTCGGCATGTaGCCCAGCAGCATCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: APQASSRVLVHLEKELQVSMVGM*PSSIFT Trigger: AGTGAAGATGCTGCTGGGTCACATGCCGACCATCGA...GACCTGGAGTTCTTTTTCAAGATGGACCAACACCCTGCTGCTGGCCTGTGGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR GCA 90 bp | TGGCCGTACCCAGTGCTGCGGGATGCACTGTGCCCAGAACCCTCTGCTGAAGCCGTCACTTCTGAAAACTaGATCAGGTGGTATTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WPYPVLRDALCPEPSAEAVTSEN*IRWYFL Trigger: GAGGAAATACCACCTGATGCAGTTTTCAGAAGTGAC...GGCTTCAGCAGAGGGTTCTGGGCACAGTGCATCCCGCAGCACTGGGTACGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCCGACAGGACAGTGGCTATAGGAAACGGAAGCGAGGCAGAGGAAAGGCTCTGGACTATCACCGTCTaGCACTTGTACGCTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: GPDRTVAIGNGSEAEERLWTITV*HLYASM Trigger: CATAGAAGCGTACAAGTGCCAGACGGTGATAGTCCA...GAGCCTTTCCTCTGCCTCGCTTCCGTTTCCTATAGCCACTGTCCTGTCGGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| 3UTR CAA 72 bp | GAGCACCACAGGCCAGCAGCAGGGTGTTGGTCCATCTaGAAAAAGAACTCCAGGTCTTGGCAAGGCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EHHRPAAGCWSI*KKNSRSWQGWH Trigger: ATGCCAGCCTTGCCAAGACCTGGAGTTCTTTTTCAAGATGGACCAACACCCTGCTGCTGGCCTGTGGTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
||
| CDS-3UTR CCA 90 bp | CGACAGGACAGTGGCTATAGGAAACGGAAGCGAGGCAGAGGAAAGGCTCAGAAGAGTCACTGTCAAACATaGCCTTGCGCCCCACGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQDSGYRKRKRGRGKAQKSHCQT*PCAPRS Trigger: ACTACGTGGGGCGCAAGGCCATGTTTGACAGTGACT...CTTCTGAGCCTTTCCTCTGCCTCGCTTCCGTTTCCTATAGCCACTGTCCTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAGAGAGAGAGAGAGAGAGAGAGGAGGGAGGGAGGAAACCCTACAAGATGTGCAGGTTGCCCTCACTaGCGGCTTTGGTCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KERERERERREGGNPTRCAGCPH*RLWSLL Trigger: CAGAAGTGACCAAAGCCGTCAGTGAGGGCAACCTGC...ACATCTTGTAGGGTTTCCTCCCTCCCTCCTCTCTCTCTCTCTCTCTCTCTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGGAGGGAGGGAGGAAACCCTACAAGATGTCACATCAGCTTCTCCAGGATaGGGAAGATGCCACAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RERERERGGREETLQDVTSASPG*GRCHSG Trigger: TCCGCTGTGGCATCTTCCTCATCCTGGAGAAGCTGA...TGTGACATCTTGTAGGGTTTCCTCCCTCCCTCCTCTCTCTCTCTCTCTCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR TCA 90 bp | AACCCTCTGCTGAAGCCCACCCAGGCTAACTGTCTAGAGGAAGGGTCTCTGGAAAAGGGTTCTGCTTGCTaGCGACCAGTTTCTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: NPLLKPTQANCLEEGSLEKGSAC*RPVSDA Trigger: AGCATCAGAAACTGGTCGTCAGCAAGCAGAACCCTT...TTCCAGAGACCCTTCCTCTAGACAGTTAGCCTGGGTGGGCTTCAGCAGAGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR CCA 90 bp | AACCCTCTGCTGAAGCCCACCCAGGCTAACTGTCTAGAGGAAGGGTCTCTGGAAGGCTCCAGAACTTGCTaGCATTTCTCTTCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NPLLKPTQANCLEEGSLEGSRTC*HFSSGE Trigger: CTCTCCAGAAGAGAAATGCCAGCAAGTTCTGGAGCC...TTCCAGAGACCCTTCCTCTAGACAGTTAGCCTGGGTGGGCTTCAGCAGAGGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR TCA 90 bp | GCACCACAGGCCAGCAGCAGGGTGTTGGTCCATCTTGAAAAAGAACTCCAGGTCGGCTTTGGTCACTTCTaGAAACTGCATCAGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: APQASSRVLVHLEKELQVGFGHF*KLHQVV Trigger: TACCACCTGATGCAGTTTTCAGAAGTGACCAAAGCC...GACCTGGAGTTCTTTTTCAAGATGGACCAACACCCTGCTGCTGGCCTGTGGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR GCA 90 bp | GCCATATGGGTGCCAGGAATCAAACACACATCCTCTGGCAGAGCAGTAGCTGTTCAGCTCTGCACAGGATaGTCCATCTCTGGTGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: AIWVPGIKHTSSGRAVAVQLCTG*SISGVD Trigger: ATCGACACCAGAGATGGAGCATCCTGTGCAGAGCTG...AACAGCTACTGCTCTGCCAGAGGATGTGTGTTTGATTCCTGGCACCCATATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
||
| CDS-3UTR GCA 90 bp | GCAATGGGTCCCCTAGAACTGGAGTTAGAGGCTGTGAGCTGCCATATGGGTGCCTATCCGAAGGTCAAGTaGTACTGCATACATGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: AMGPLELELEAVSCHMGAYPKVK*YCIHDR Trigger: CCTGTCATGTATGCAGTAGCACTTGACCTTCGGATA...GGCACCCATATGGCAGCTCACAGCCTCTAACTCCAGTTCTAGGGGACCCATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR TCA 90 bp | GGGCCCGACAGGACAGTGGCTATAGGAAACGGAAGCGAGGCAGAGGAAAGGCTCACAGCTGATGTGTCTTaGGTAACAAATACACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPDRTVAIGNGSEAEERLTADVS*VTNTLS Trigger: AGAAAGTGTATTTGTTACTCAAGACACATCAGCTGT...GAGCCTTTCCTCTGCCTCGCTTCCGTTTCCTATAGCCACTGTCCTGTCGGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTAGAGGCTGTGAGCTGCCATATGGGTGCCAGGAATCAAACACACATCCTCATGAAGAACGTCTCGTaGTTTGCCAGCGCCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: ELEAVSCHMGARNQTHILMKNVS*FASASL Trigger: CAATGAGGCGCTGGCAAAGCACGAGACGTTCTTCAT...GAGGATGTGTGTTTGATTCCTGGCACCCATATGGCAGCTCACAGCCTCTAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTCAAACATGGCCTTGCGCCCCACGTAGTACTTGTACGTGATCCTCTGCGCAGGATGCTCCATCTCTaGTGTCGATGGCTTCATATA | + |
|
Preference number: 4 (lower is better) Translates to: TVKHGLAPHVVLVRDPLRRMLHL*CRWLHI Trigger: TATATGAAGCCATCGACACCAGAGATGGAGCATCCT...GCGCAGAGGATCACGTACAAGTACTACGTGGGGCGCAAGGCCATGTTTGACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGGAGGGAGGGAGGAAACCCTACAAGATGTCAATCCTCTTGTTCTTCTaGCTGGAGCGATGGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: REREREREEGGRKPYKMSILLFF*LERWQC Trigger: ACACTGCCATCGCTCCAGCCAGAAGAACAAGAGGAT...TGACATCTTGTAGGGTTTCCTCCCTCCCTCCTCTCTCTCTCTCTCTCTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGGGAGGGAGGAAACCCTACAAGATGTCACAAAGGTAGCCTCCATAAACTTGGCCAGAATGCACTaGACCTCGTCAATGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: RGGREETLQDVTKVASINLARMH*TSSMST Trigger: CGTGGACATTGACGAGGTCCAGTGCATTCTGGCCAA...GTTTATGGAGGCTACCTTTGTGACATCTTGTAGGGTTTCCTCCCTCCCTCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| 3UTR CAA 72 bp | ATTTATGTATGCATGCCTGTTTGCCTGAGTGAGCTTTaGTACACGTGTGCAGGAGCCCGTGGAGGCCAACGA | + |
|
Preference number: 4 (lower is better) Translates to: IYVCMPVCLSEL*YTCAGARGGQR Trigger: TCGTTGGCCTCCACGGGCTCCTGCACACGTGTACAAAAGCTCACTCAGGCAAACAGGCATGCATACATAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
||
| CDS-3UTR GCA 90 bp | GCCATATGGGTGCCAGGAATCAAACACACATCCTCTGGCAGAGCAGTAGCTGTTAAGGTCAAGTGCTACTaGATACATGACAGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AIWVPGIKHTSSGRAVAVKVKCY*IHDRQS Trigger: GCTCTGCCTGTCATGTATGCAGTAGCACTTGACCTT...AACAGCTACTGCTCTGCCAGAGGATGTGTGTTTGATTCCTGGCACCCATATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
||
| 3UTR CAA 72 bp | TCATTGAGCAGCAGCAGGTTGCCCTCACTGACGGCTTaGGTCACTTCTGAAAACTGCATCAGGTGGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSSRLPSLTA*VTSENCIRWYF Trigger: GAAATACCACCTGATGCAGTTTTCAGAAGTGACCAAAGCCGTCAGTGAGGGCAACCTGCTGCTGCTCAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168164.8 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGGAGGGAGGGAGGAAACCCTACAAGATGTCACAAGGATGCTCCATCTCTaGTGTCGATGGCTTCATATA | + |
|
Preference number: 4 (lower is better) Translates to: RERERERGGREETLQDVTRMLHL*CRWLHI Trigger: TATATGAAGCCATCGACACCAGAGATGGAGCATCCT...TGTGACATCTTGTAGGGTTTCCTCCCTCCCTCCTCTCTCTCTCTCTCTCTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 |
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| CDS-3UTR GCA 90 bp | AGGGAGGAAACCCTACAAGATGTCACAAAGGTAGCCTCCATAAACAAACCGAAGTGTCAAACATGGCCTTaGGCCCCACGTAGTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: REETLQDVTKVASINKPKCQTWP*APRSTC Trigger: ACAAGTACTACGTGGGGCGCAAGGCCATGTTTGACA...CTTCGGTTTGTTTATGGAGGCTACCTTTGTGACATCTTGTAGGGTTTCCTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
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| CDS-3UTR TCA 90 bp | ATTCGAGCTGTCGATGGCTCTGATAAGAGGTTTACACAAATGGAGTTTGTTGATCAGTTTTCCTCTTTGTaGGCCTGGAATGCCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IRAVDGSDKRFTQMEFVDQFSSL*AWNARR Trigger: CCTCCGGGCATTCCAGGCTCACAAAGAGGAAAACTG...ATCAACAAACTCCATTTGTGTAAACCTCTTATCAGAGCCATCGACAGCTCGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172443.2 |
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| CDS-3UTR GCA 90 bp | AGAGGAGGGAGGGAGGAAACCCTACAAGATGTCACAAAGGTAGCCTCCATAAACCCTTTCTTTACCAACTaGTGGTCTGCATTATTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGGREETLQDVTKVASINPFFTN*WSALLA Trigger: TGCCAATAATGCAGACCAGCAGTTGGTAAAGAAAGG...GTTTATGGAGGCTACCTTTGTGACATCTTGTAGGGTTTCCTCCCTCCCTCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
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| CDS-3UTR CCA 90 bp | ATTCGAGCTGTCGATGGCTCTGATAAGAGGTTTACACAAATGGAGTTTGTTGATCTGGCATTTCTCTTCTaGAGAGGCCATCTGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IRAVDGSDKRFTQMEFVDLAFLF*RGHLEP Trigger: CGGCTCCAGATGGCCTCTCCAGAAGAGAAATGCCAG...ATCAACAAACTCCATTTGTGTAAACCTCTTATCAGAGCCATCGACAGCTCGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172443.2 |
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| CDS-3UTR CCA 90 bp | AGAGGAGGGAGGGAGGAAACCCTACAAGATGTCACAAAGGTAGCCTCCATAAACAAACATTTCATCATATaGGGGCTCCAGAACTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGGREETLQDVTKVASINKHFII*GLQNLL Trigger: CAGCAAGTTCTGGAGCCCCCATATGATGAAATGTTT...GTTTATGGAGGCTACCTTTGTGACATCTTGTAGGGTTTCCTCCCTCCCTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAGGGAGGGAGGAAACCCTACAAGATGTCACAAAGGTAGCCTCCATAAACGCTGGTCTGCATTATTaGCAAATATCCGAAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGGREETLQDVTKVASINAGLHY*QISEGQ Trigger: TTGACCTTCGGATATTTGCCAATAATGCAGACCAGC...GTTTATGGAGGCTACCTTTGTGACATCTTGTAGGGTTTCCTCCCTCCCTCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
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| CDS-3UTR GCA 90 bp | TTTCAGATTCGAGCTGTCGATGGCTCTGATAAGAGGTTTACACAAATGGAGTTTCAGCTCTGCACAGGATaGTCCATCTCTGGTGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: FQIRAVDGSDKRFTQMEFQLCTG*SISGVD Trigger: ATCGACACCAGAGATGGAGCATCCTGTGCAGAGCTG...AAACTCCATTTGTGTAAACCTCTTATCAGAGCCATCGACAGCTCGAATCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168164.8 ENSMUST00000172443.2 |
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| CDS-3UTR CCA 90 bp | CAGATTCGAGCTGTCGATGGCTCTGATAAGAGGTTTACACAAATGGAGTTTGTTGGCTCCAGAACTTGCTaGCATTTCTCTTCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QIRAVDGSDKRFTQMEFVGSRTC*HFSSGE Trigger: CTCTCCAGAAGAGAAATGCCAGCAAGTTCTGGAGCC...AACAAACTCCATTTGTGTAAACCTCTTATCAGAGCCATCGACAGCTCGAATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172443.2 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGGAGGGAGGGAGGAAACCCTACAAGATGTCACATTCTTTACCAACTGCTaGTCTGCATTATTGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RERERERGGREETLQDVTFFTNC*SALLAN Trigger: ATTTGCCAATAATGCAGACCAGCAGTTGGTAAAGAA...TGTGACATCTTGTAGGGTTTCCTCCCTCCCTCCTCTCTCTCTCTCTCTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
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| CDS-3UTR TCA 90 bp | TTCAGATTCGAGCTGTCGATGGCTCTGATAAGAGGTTTACACAAATGGAGTTTGACTTGTACGCTTCTATaGAGTCGTGATTCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FRFELSMALIRGLHKWSLTCTLL*SRDSPQ Trigger: CTGTGGGGAATCACGACTTCATAGAAGCGTACAAGT...CAAACTCCATTTGTGTAAACCTCTTATCAGAGCCATCGACAGCTCGAATCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172443.2 |
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| CDS-3UTR CCA 90 bp | AGATTCGAGCTGTCGATGGCTCTGATAAGAGGTTTACACAAATGGAGTTTGTTGTGGACTATCACCGTCTaGCACTTGTACGCTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: RFELSMALIRGLHKWSLLWTITV*HLYASM Trigger: CATAGAAGCGTACAAGTGCCAGACGGTGATAGTCCA...CAACAAACTCCATTTGTGTAAACCTCTTATCAGAGCCATCGACAGCTCGAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172443.2 |
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| CDS-3UTR TCA 90 bp | ACTTGTATAAACTTGGGTTACCTTTTTAAGAAAGAGAGAGAGAGAGAGAGAAAGCAGTTTTCCTCTTTGTaGGCCTGGAATGCCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TCINLGYLFKKERERERKQFSSL*AWNARR Trigger: CCTCCGGGCATTCCAGGCTCACAAAGAGGAAAACTG...CTTTCTCTCTCTCTCTCTCTCTTTCTTAAAAAGGTAACCCAAGTTTATACAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
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| CDS-3UTR GCA 90 bp | ATTCGAGCTGTCGATGGCTCTGATAAGAGGTTTACACAAATGGAGTTTGTTGATAAGGTCAAGTGCTACTaGATACATGACAGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IRAVDGSDKRFTQMEFVDKVKCY*IHDRQS Trigger: GCTCTGCCTGTCATGTATGCAGTAGCACTTGACCTT...ATCAACAAACTCCATTTGTGTAAACCTCTTATCAGAGCCATCGACAGCTCGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172443.2 |
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| CDS-3UTR CCA 90 bp | TTCAGATTCGAGCTGTCGATGGCTCTGATAAGAGGTTTACACAAATGGAGTTTGAGGATGCTCCATCTCTaGTGTCGATGGCTTCATATA | + |
|
Preference number: 4 (lower is better) Translates to: FRFELSMALIRGLHKWSLRMLHL*CRWLHI Trigger: TATATGAAGCCATCGACACCAGAGATGGAGCATCCT...CAAACTCCATTTGTGTAAACCTCTTATCAGAGCCATCGACAGCTCGAATCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168164.8 ENSMUST00000172443.2 |
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| CDS-3UTR CCA 90 bp | ACTTGTATAAACTTGGGTTACCTTTTTAAGAAAGAGAGAGAGAGAGAGAGAAAGCTGGCATTTCTCTTCTaGAGAGGCCATCTGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TCINLGYLFKKERERERKLAFLF*RGHLEP Trigger: CGGCTCCAGATGGCCTCTCCAGAAGAGAAATGCCAG...CTTTCTCTCTCTCTCTCTCTCTTTCTTAAAAAGGTAACCCAAGTTTATACAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
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| CDS-3UTR CCA 90 bp | TTCAGATTCGAGCTGTCGATGGCTCTGATAAGAGGTTTACACAAATGGAGTTTGAAACATTTCATCATATaGGGGCTCCAGAACTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRFELSMALIRGLHKWSLKHFII*GLQNLL Trigger: CAGCAAGTTCTGGAGCCCCCATATGATGAAATGTTT...CAAACTCCATTTGTGTAAACCTCTTATCAGAGCCATCGACAGCTCGAATCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172443.2 |
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| CDS-3UTR GCA 90 bp | ACTTGTATAAACTTGGGTTACCTTTTTAAGAAAGAGAGAGAGAGAGAGAGAAAGTCAAGTTGGCCAGAATaGACTGGACCTCGTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: TCINLGYLFKKERERERKSSWPE*TGPRQC Trigger: ACATTGACGAGGTCCAGTGCATTCTGGCCAACTTGA...CTTTCTCTCTCTCTCTCTCTCTTTCTTAAAAAGGTAACCCAAGTTTATACAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
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| CDS-3UTR CAA 90 bp | TGTGAGCTCCAGCGGGCAGCGGTAGCAGGAGCACGCTGTTGGCAAGGCCTGGGCATCACCGTCTGGCACTaGTACGCTTCTATGAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: CELQRAAVAGARCWQGLGITVWH*YASMKS Trigger: CGACTTCATAGAAGCGTACAAGTGCCAGACGGTGAT...GCCCAGGCCTTGCCAACAGCGTGCTCCTGCTACCGCTGCCCGCTGGAGCTCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
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| CDS-3UTR CAA 90 bp | GGGCCCGACAGGACAGTGGCTATAGGAAACGGAAGCGAGGCAGAGGAAAGGCTCTTGAGCAGCAGCAGGTaGCCCTCACTGACGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPDRTVAIGNGSEAEERLLSSSR*PSLTAL Trigger: CAAAGCCGTCAGTGAGGGCAACCTGCTGCTGCTCAA...GAGCCTTTCCTCTGCCTCGCTTCCGTTTCCTATAGCCACTGTCCTGTCGGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
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| CDS-3UTR CAA 90 bp | GTTAGAGGCTGTGAGCTGCCATATGGGTGCCAGGAATCAAACACACATCCTCTGTTTGCCAGCGCCTCATaGAGCAGCAGCAGGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VRGCELPYGCQESNTHPLFASAS*SSSRLP Trigger: GGGCAACCTGCTGCTGCTCAATGAGGCGCTGGCAAA...CAGAGGATGTGTGTTTGATTCCTGGCACCCATATGGCAGCTCACAGCCTCTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
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| CDS TCA 90 bp | CATTTCTCTTCTGGAGAGGCCATCTGGAGCCGTGGGTTCGCAACATaGGGGTGCTTAAAGGATACCAGCTCTGCACAGGATGCTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: HFSSGEAIWSRGFAT*GCLKDTSSAQDAPS Trigger: AGATGGAGCATCCTGTGCAGAGCTGGTATCCTTTAAGCACCCTCATGTTGCGAACCCACGGCTCCAGATGGCCTCTCCAGAAGAGAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000172443.2 |
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| CDS GCA 90 bp | GAGCCGTGGGTTCGCAACATGAGGGTGCTTAAAGGATACCAGCTCTaGACAGGATGCTCCATCTCTGGTGTCGATGGCTTCATATACCTG | + |
|
Preference number: 5 (lower is better) Translates to: EPWVRNMRVLKGYQL*TGCSISGVDGFIYL Trigger: CAGGTATATGAAGCCATCGACACCAGAGATGGAGCATCCTGTGCAGAGCTGGTATCCTTTAAGCACCCTCATGTTGCGAACCCACGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164416.8 ENSMUST00000168164.8 ENSMUST00000172443.2 |
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| CDS CCA 90 bp | CATTTCATCATATGGGGGCTCCAGAACTTGCTGGCATTTCTCTTCTaGAGAGGCCATCTGGAGCCGTGGGTTCGCAACATGAGGGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HFIIWGLQNLLAFLF*RGHLEPWVRNMRVL Trigger: AAGCACCCTCATGTTGCGAACCCACGGCTCCAGATGGCCTCTCCAGAAGAGAAATGCCAGCAAGTTCTGGAGCCCCCATATGATGAAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000172443.2 |
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| CDS-3UTR CAA 90 bp | AATCAAACACACATCCTCTGGCAGAGCAGTAGCTGTTCTCGCCTGAACCGTCTCCCCTCACTGACGGCTTaGGTCACTTCTGAAAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: NQTHILWQSSSCSRLNRLPSLTA*VTSENC Trigger: GCAGTTTTCAGAAGTGACCAAAGCCGTCAGTGAGGG...GAGACGGTTCAGGCGAGAACAGCTACTGCTCTGCCAGAGGATGTGTGTTTGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
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| CDS-3UTR CAA 90 bp | GCCAGCAGCAGGGTGTTGGTCCATCTTGAAAAAGAACTCCAGGTCTTGGCAAGGCCCATGTATATCAAGTaGGCCAGAATGCACTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: ASSRVLVHLEKELQVLARPMYIK*ARMHWT Trigger: GGTCCAGTGCATTCTGGCCAACTTGATATACATGGG...CCTTGCCAAGACCTGGAGTTCTTTTTCAAGATGGACCAACACCCTGCTGCTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
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| CDS GCA 90 bp | ATGCCGGCACGGATTATTGGCAAATATCCGAAGGTCAAGTGCTACTaGATACATGACAGGCAGAGCCCAGTTTTCCTCTTTGTGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: MPARIIGKYPKVKCY*IHDRQSPVFLFVSL Trigger: CAGGCTCACAAAGAGGAAAACTGGGCTCTGCCTGTCATGTATGCAGTAGCACTTGACCTTCGGATATTTGCCAATAATCCGTGCCGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172443.2 |
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| CDS-3UTR CAA 90 bp | AACCCTCTGCTGAAGCCCACCCAGGCTAACTGTCTAGAGGAAGGGTCTCTGGAAAACAAATACACTTTCTaGAAGAGGTTCCTGTACGTG | + |
|
Preference number: 5 (lower is better) Translates to: NPLLKPTQANCLEEGSLENKYTF*KRFLYV Trigger: CACGTACAGGAACCTCTTCAAGAAAGTGTATTTGTT...TTCCAGAGACCCTTCCTCTAGACAGTTAGCCTGGGTGGGCTTCAGCAGAGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164416.8 |
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| CDS TCA 90 bp | GGAGGAATGATTGGACTATCACCGTCTGGCACTTGTACGCTTCTATaGAGTCGTGATTCCCCACAGCATAGGTACACCTTAAATGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGMIGLSPSGTCTLL*SRDSPQHRYTLNEL Trigger: CAGCTCATTTAAGGTGTACCTATGCTGTGGGGAATCACGACTTCATAGAAGCGTACAAGTGCCAGACGGTGATAGTCCAATCATTCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000172443.2 |
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| CDS GCA 90 bp | TCTTCTATGCCGGCACGGATTATTGGCAAATATCCGAAGGTCAAGTaGTACTGCATACATGACAGGCAGAGCCCAGTTTTCCTCTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSMPARIIGKYPKVK*YCIHDRQSPVFLFV Trigger: CACAAAGAGGAAAACTGGGCTCTGCCTGTCATGTATGCAGTAGCACTTGACCTTCGGATATTTGCCAATAATCCGTGCCGGCATAGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172443.2 |
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| CDS-3UTR CAA 90 bp | TTTCAGATTCGAGCTGTCGATGGCTCTGATAAGAGGTTTACACAAATGGAGTTTATCACCGTCTGGCACTaGTACGCTTCTATGAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FQIRAVDGSDKRFTQMEFITVWH*YASMKS Trigger: CGACTTCATAGAAGCGTACAAGTGCCAGACGGTGAT...AAACTCCATTTGTGTAAACCTCTTATCAGAGCCATCGACAGCTCGAATCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172443.2 |
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| CDS-3UTR CAA 90 bp | TTTCAGATTCGAGCTGTCGATGGCTCTGATAAGAGGTTTACACAAATGGAGTTTTGCCGGCACGGATTATaGGCAAATATCCGAAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FQIRAVDGSDKRFTQMEFCRHGL*ANIRRS Trigger: TGACCTTCGGATATTTGCCAATAATCCGTGCCGGCA...AAACTCCATTTGTGTAAACCTCTTATCAGAGCCATCGACAGCTCGAATCTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172443.2 |
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| CDS CCA 72 bp | ATATGGGGGCTCCAGAACTTGCTGGCATTTCTCTTCTaGAGAGGCCATCTGGAGCCGTGGGTTCGCAACATG | + |
|
Preference number: 6 (lower is better) Translates to: IWGLQNLLAFLF*RGHLEPWVRNM Trigger: CATGTTGCGAACCCACGGCTCCAGATGGCCTCTCCAGAAGAGAAATGCCAGCAAGTTCTGGAGCCCCCATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000172443.2 |
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| CDS CCA 72 bp | GCAAACATTTCATCATATGGGGGCTCCAGAACTTGCTaGCATTTCTCTTCTGGAGAGGCCATCTGGAGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: ANISSYGGSRTC*HFSSGEAIWSR Trigger: ACGGCTCCAGATGGCCTCTCCAGAAGAGAAATGCCAGCAAGTTCTGGAGCCCCCATATGATGAAATGTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000172443.2 |
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| CDS TCA 72 bp | ATTGGACTATCACCGTCTGGCACTTGTACGCTTCTATaGAGTCGTGATTCCCCACAGCATAGGTACACCTTA | + |
|
Preference number: 6 (lower is better) Translates to: IGLSPSGTCTLL*SRDSPQHRYTL Trigger: TAAGGTGTACCTATGCTGTGGGGAATCACGACTTCATAGAAGCGTACAAGTGCCAGACGGTGATAGTCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164416.8 ENSMUST00000172443.2 |
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