Pregenerated sensors for PCGF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025050Ensembl transcript IDs: ENSMUST00000026032.7, ENSMUST00000235633.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCAGAGTCCCAGCTCTGGGAAACTGACCCACCCACCTCAAAGATaGGAAGCAACCAGCAACTTCCTCATATTTGGAATCACAAGGAAT | + |
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Preference number: 1 (lower is better) Translates to: GQSPSSGKLTHPPQR*EATSNFLIFGITRN Trigger: ATTCCTTGTGATTCCAAATATGAGGAAGTTGCTGGTTGCTTCCCATCTTTGAGGTGGGTGGGTCAGTTTCCCAGAGCTGGGACTCTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR GCA 90 bp | GTCGTAGTTACGTGCTTTGTGAGAATCTTTGGTGCAATGCAGATATaGAGATGCCTCCGACTGGGTTTCTCTCCTCATATACCTTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: VVVTCFVRIFGAMQI*RCLRLGFSPHIPLH Trigger: ATGCAAAGGTATATGAGGAGAGAAACCCAGTCGGAGGCATCTGCATATCTGCATTGCACCAAAGATTCTCACAAAGCACGTAACTACGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGACAGTCTCAGCCTCAGAGCTGAGGAACAGGGCTTTAGTGGTATCAGTGGACACCCACCTCAAAGATaGGAAGCAACCAGCAACTTC | + |
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Preference number: 2 (lower is better) Translates to: GDSLSLRAEEQGFSGISGHPPQR*EATSNF Trigger: GAAGTTGCTGGTTGCTTCCCATCTTTGAGGTGGGTG...TCCACTGATACCACTAAAGCCCTGTTCCTCAGCTCTGAGGCTGAGACTGTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGACAGTCTCAGCCTCAGAGCTGAGGAACAGGGCTTTAGTGGTATCAGTGGAACAGGAACTTGTAAGTaGCCAGTAGTTTCGGTGCGG | + |
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Preference number: 2 (lower is better) Translates to: GDSLSLRAEEQGFSGISGTGTCK*PVVSVR Trigger: CCGCACCGAAACTACTGGCCACTTACAAGTTCCTGT...TCCACTGATACCACTAAAGCCCTGTTCCTCAGCTCTGAGGCTGAGACTGTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAAGCAAAGCTGTTCTGAAGGAAACCACCCAGCCCATGCAGCTGGAGGGCAGGAATCTTTGGTGCAATaGAGATATGCAGATGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SKQSCSEGNHPAHAAGGQESLVQ*RYADAS Trigger: GGAGGCATCTGCATATCTGCATTGCACCAAAGATTC...CTGCCCTCCAGCTGCATGGGCTGGGTGGTTTCCTTCAGAACAGCTTTGCTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCTACTGTTAGAAGCAGTGCCATCATTCACAGCCACACTGAGGGAATTTTGTAAACCACCCAGCCCATaGAGCTGGAGGGCAGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: LLLLEAVPSFTATLREFCKPPSP*SWRAES Trigger: GGACTCTGCCCTCCAGCTGCATGGGCTGGGTGGTTT...ACAAAATTCCCTCAGTGTGGCTGTGAATGATGGCACTGCTTCTAACAGTAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR CCA 90 bp | AGACTGGCTCTGAACTCAAAGCAAAGCTGTTCTGAAGGAAACCACCCAGCCCATGCAGATGCCTCCGACTaGGTTTCTCTCCTCATATAC | + |
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Preference number: 2 (lower is better) Translates to: RLALNSKQSCSEGNHPAHADASD*VSLLIY Trigger: GTATATGAGGAGAGAAACCCAGTCGGAGGCATCTGC...ATGGGCTGGGTGGTTTCCTTCAGAACAGCTTTGCTTTGAGTTCAGAGCCAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCTACTGTTAGAAGCAGTGCCATCATTCACAGCCACACTGAGGGAATTTTGTCCAGCTCTGGGAAACTaGCCCACCCACCTCAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: LLLLEAVPSFTATLREFCPALGN*PTHLKD Trigger: ATCTTTGAGGTGGGTGGGTCAGTTTCCCAGAGCTGG...ACAAAATTCCCTCAGTGTGGCTGTGAATGATGGCACTGCTTCTAACAGTAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR TCA 90 bp | AGACTGGCTCTGAACTCAAAGCAAAGCTGTTCTGAAGGAAACCACCCAGCCCATAGTGATCCCCACAGATaGTATCTACCTGACAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: RLALNSKQSCSEGNHPAHSDPHR*YLPDKL Trigger: CAGCTTGTCAGGTAGATATCATCTGTGGGGATCACT...ATGGGCTGGGTGGTTTCCTTCAGAACAGCTTTGCTTTGAGTTCAGAGCCAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235633.2 |
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| 3UTR-3UTR GCA 90 bp | GTGACACCTGACCCAGTGTCCCATCAGAAAGAAGCACCTCATATTTGTTTAAGGGGTGCAATGCAGATATaGAGATGCCTCCGACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: VTPDPVSHQKEAPHICLRGAMQI*RCLRLG Trigger: ACCCAGTCGGAGGCATCTGCATATCTGCATTGCACC...CCTTAAACAAATATGAGGTGCTTCTTTCTGATGGGACACTGGGTCAGGTGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR TCA 90 bp | GACAGTCTCAGCCTCAGAGCTGAGGAACAGGGCTTTAGTGGTATCAGTGGAATTTTAACAGACTGGCTCTaGACTCAAAGCAAAGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: DSLSLRAEEQGFSGISGILTDWL*TQSKAV Trigger: AACAGCTTTGCTTTGAGTTCAGAGCCAGTCTGTTAA...AATTCCACTGATACCACTAAAGCCCTGTTCCTCAGCTCTGAGGCTGAGACTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGAACTCAAAGCAAAGCTGTTCTGAAGGAAACCACCCAGCCCATGCAGCTCTTTGTGAGAATCTTTaGTGCAATGCAGATATGCAG | + |
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Preference number: 2 (lower is better) Translates to: ALNSKQSCSEGNHPAHAALCENL*CNADMQ Trigger: CTGCATATCTGCATTGCACCAAAGATTCTCACAAAG...AGCTGCATGGGCTGGGTGGTTTCCTTCAGAACAGCTTTGCTTTGAGTTCAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR GCA 90 bp | GTGACACCTGACCCAGTGTCCCATCAGAAAGAAGCACCTCATATTTGTTTAAGGACAAGCAGACCGTCCTaGATTGCTGTATCACCTATT | + |
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Preference number: 2 (lower is better) Translates to: VTPDPVSHQKEAPHICLRTSRPS*IAVSPI Trigger: AATAGGTGATACAGCAATGCAGGACGGTCTGCTTGT...CCTTAAACAAATATGAGGTGCTTCTTTCTGATGGGACACTGGGTCAGGTGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235633.2 |
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| 3UTR-3UTR CCA 90 bp | GACAGTCTCAGCCTCAGAGCTGAGGAACAGGGCTTTAGTGGTATCAGTGGAATTCTTTGTGAGAATCTTTaGTGCAATGCAGATATGCAG | + |
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Preference number: 2 (lower is better) Translates to: DSLSLRAEEQGFSGISGILCENL*CNADMQ Trigger: CTGCATATCTGCATTGCACCAAAGATTCTCACAAAG...AATTCCACTGATACCACTAAAGCCCTGTTCCTCAGCTCTGAGGCTGAGACTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR CAA 90 bp | AGCCTCAGAGCTGAGGAACAGGGCTTTAGTGGTATCAGTGGAATTTaGTTTGAAGTTCAGAATAGGACAGGAACTTGTAAGTGGCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: SLRAEEQGFSGISGI*FEVQNRTGTCKWPV Trigger: TACTGGCCACTTACAAGTTCCTGTCCTATTCTGAACTTCAAACAAAATTCCACTGATACCACTAAAGCCCTGTTCCTCAGCTCTGAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR TCA 90 bp | GAACAGGGCTTTAGTGGTATCAGTGGAATTTTGTTTGAAGTTCAGAATAGGACAATGCTAGGGTTCTGGTaGCAACAGAAGCCAGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: EQGFSGISGILFEVQNRTMLGFW*QQKPAL Trigger: AAGAGCTGGCTTCTGTTGTCACCAGAACCCTAGCAT...TGTCCTATTCTGAACTTCAAACAAAATTCCACTGATACCACTAAAGCCCTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGCAAATACATTCTATTGTTTCAAGTTGTACACACACAATGCTAGGGTTCTGGGTGCAATGCAGATATaGAGATGCCTCCGACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: VANTFYCFKLYTHNARVLGAMQI*RCLRLG Trigger: ACCCAGTCGGAGGCATCTGCATATCTGCATTGCACC...CAGAACCCTAGCATTGTGTGTGTACAACTTGAAACAATAGAATGTATTTGCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR CCA 90 bp | GAACAGGGCTTTAGTGGTATCAGTGGAATTTTGTTTGAAGTTCAGAATAGGACAGCAGATGCCTCCGACTaGGTTTCTCTCCTCATATAC | + |
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Preference number: 2 (lower is better) Translates to: EQGFSGISGILFEVQNRTADASD*VSLLIY Trigger: GTATATGAGGAGAGAAACCCAGTCGGAGGCATCTGC...TGTCCTATTCTGAACTTCAAACAAAATTCCACTGATACCACTAAAGCCCTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR TCA 90 bp | AATGTTTACAATGAAGTCTCTGTGAAAGCAAGGTTCTCAAAGACTCTCATTCTTATGCTAGGGTTCTGGTaGCAACAGAAGCCAGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: NVYNEVSVKARFSKTLILMLGFW*QQKPAL Trigger: AAGAGCTGGCTTCTGTTGTCACCAGAACCCTAGCAT...AAGAATGAGAGTCTTTGAGAACCTTGCTTTCACAGAGACTTCATTGTAAACATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGCAAATACATTCTATTGTTTCAAGTTGTACACACACAATGCTAGGGTTCTGCAGATGATATCTACCTaGCAAGCTGGATCAAGACCC | + |
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Preference number: 2 (lower is better) Translates to: VANTFYCFKLYTHNARVLQMIST*QAGSRP Trigger: GGGTCTTGATCCAGCTTGTCAGGTAGATATCATCTG...CAGAACCCTAGCATTGTGTGTGTACAACTTGAAACAATAGAATGTATTTGCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235633.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGTGACACCTGACCCAGTGTCCCATCAGAAAGAAGCACCTCATATTTGTTTATGTGAGAATCTTTGGTaGAATGCAGATATGCAGATG | + |
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Preference number: 2 (lower is better) Translates to: FVTPDPVSHQKEAPHICLCENLW*NADMQM Trigger: CATCTGCATATCTGCATTGCACCAAAGATTCTCACA...TAAACAAATATGAGGTGCTTCTTTCTGATGGGACACTGGGTCAGGTGTCACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCTGAGGAACAGGGCTTTAGTGGTATCAGTGGAATTTTGTTTGAAGTTCAGATGTGAGAATCTTTGGTaGAATGCAGATATGCAGATG | + |
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Preference number: 2 (lower is better) Translates to: ELRNRALVVSVEFCLKFRCENLW*NADMQM Trigger: CATCTGCATATCTGCATTGCACCAAAGATTCTCACA...TCTGAACTTCAAACAAAATTCCACTGATACCACTAAAGCCCTGTTCCTCAGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR CCA 90 bp | AATGTTTACAATGAAGTCTCTGTGAAAGCAAGGTTCTCAAAGACTCTCATTCTTACAGGAACTTGTAAGTaGCCAGTAGTTTCGGTGCGG | + |
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Preference number: 2 (lower is better) Translates to: NVYNEVSVKARFSKTLILTGTCK*PVVSVR Trigger: CCGCACCGAAACTACTGGCCACTTACAAGTTCCTGT...AAGAATGAGAGTCTTTGAGAACCTTGCTTTCACAGAGACTTCATTGTAAACATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR CAA 90 bp | GTTTCCATAGTCTTTAGTGTAGCAAATACATTCTATTGTTTCAAGTaGTACACACACAATGCTAGGGTTCTGGTGACAACAGAAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: VSIVFSVANTFYCFK*YTHNARVLVTTEAS Trigger: GCTGGCTTCTGTTGTCACCAGAACCCTAGCATTGTGTGTGTACAACTTGAAACAATAGAATGTATTTGCTACACTAAAGACTATGGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR CCA 72 bp | CCCAGCCCATGCAGCTGGAGGGCAGAGTCCCAGCTCTaGGAAACTGACCCACCCACCTCAAAGATGGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: PSPCSWRAESQL*ETDPPTSKMGS Trigger: GCTTCCCATCTTTGAGGTGGGTGGGTCAGTTTCCCAGAGCTGGGACTCTGCCCTCCAGCTGCATGGGCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR TCA 72 bp | AGTGCCATCATTCACAGCCACACTGAGGGAATTTTGTaGCACCTGACCCAGTGTCCCATCAGAAAGAAGCAC | + |
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Preference number: 3 (lower is better) Translates to: SAIIHSHTEGIL*HLTQCPIRKKH Trigger: GTGCTTCTTTCTGATGGGACACTGGGTCAGGTGTCACAAAATTCCCTCAGTGTGGCTGTGAATGATGGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGACAGTCTCAGCCTCAGAGCTGAGGAACAGGGCTTTAGTGGTATCAGTGGATCAGTGGAATTTTGTTaGAAGTTCAGAATAGGACAG | + |
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Preference number: 3 (lower is better) Translates to: GDSLSLRAEEQGFSGISGSVEFC*KFRIGQ Trigger: CTGTCCTATTCTGAACTTCAAACAAAATTCCACTGA...TCCACTGATACCACTAAAGCCCTGTTCCTCAGCTCTGAGGCTGAGACTGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR TCA 72 bp | TCATTCACAGCCACACTGAGGGAATTTTGTGACACCTaGCCCAGTGTCCCATCAGAAAGAAGCACCTCATAT | + |
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Preference number: 3 (lower is better) Translates to: SFTATLREFCDT*PSVPSERSTSY Trigger: ATATGAGGTGCTTCTTTCTGATGGGACACTGGGTCAGGTGTCACAAAATTCCCTCAGTGTGGCTGTGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR CCA 72 bp | GAAAGTAGTCGTAGTTACGTGCTTTGTGAGAATCTTTaGTGCAATGCAGATATGCAGATGCCTCCGACTGGG | + |
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Preference number: 3 (lower is better) Translates to: ESSRSYVLCENL*CNADMQMPPTG Trigger: CCCAGTCGGAGGCATCTGCATATCTGCATTGCACCAAAGATTCTCACAAAGCACGTAACTACGACTACTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR GCA 72 bp | AGTAGTCGTAGTTACGTGCTTTGTGAGAATCTTTGGTaGAATGCAGATATGCAGATGCCTCCGACTGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: SSRSYVLCENLW*NADMQMPPTGF Trigger: AAACCCAGTCGGAGGCATCTGCATATCTGCATTGCACCAAAGATTCTCACAAAGCACGTAACTACGACTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR CCA 72 bp | TCTTTGGTGCAATGCAGATATGCAGATGCCTCCGACTaGGTTTCTCTCCTCATATACCTTTGCATCTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: SLVQCRYADASD*VSLLIYLCIFK Trigger: CTTGAAGATGCAAAGGTATATGAGGAGAGAAACCCAGTCGGAGGCATCTGCATATCTGCATTGCACCAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235633.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGTGACACCTGACCCAGTGTCCCATCAGAAAGAAGCACCTCATATTTGTTTAGGTATCAGTGGAATTTaGTTTGAAGTTCAGAATAGG | + |
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Preference number: 3 (lower is better) Translates to: FVTPDPVSHQKEAPHICLGISGI*FEVQNR Trigger: CCTATTCTGAACTTCAAACAAAATTCCACTGATACC...TAAACAAATATGAGGTGCTTCTTTCTGATGGGACACTGGGTCAGGTGTCACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS-3UTR TCA 90 bp | GGAGACAGTCTCAGCCTCAGAGCTGAGGAACAGGGCTTTAGTGGTATCAGTGGACCGCGGGTGCCGGGATaGGGGCGGGCGGAGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: GDSLSLRAEEQGFSGISGPRVPG*GRAERW Trigger: CCATCTCTCCGCCCGCCCTCATCCCGGCACCCGCGG...TCCACTGATACCACTAAAGCCCTGTTCCTCAGCTCTGAGGCTGAGACTGTCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS-3UTR GCA 90 bp | GCTCTGAACTCAAAGCAAAGCTGTTCTGAAGGAAACCACCCAGCCCATGCAGCTTCAAGCGGCCCAGGCTaGGCTCGGGCTCCAACGCCG | + |
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Preference number: 4 (lower is better) Translates to: ALNSKQSCSEGNHPAHAASSGPG*ARAPTP Trigger: CGGCGTTGGAGCCCGAGCGCAGCCTGGGCCGCTTGA...AGCTGCATGGGCTGGGTGGTTTCCTTCAGAACAGCTTTGCTTTGAGTTCAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS-3UTR GCA 90 bp | GTGACACCTGACCCAGTGTCCCATCAGAAAGAAGCACCTCATATTTGTTTAAGGTCAAGCGGCCCAGGCTaGGCTCGGGCTCCAACGCCG | + |
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Preference number: 4 (lower is better) Translates to: VTPDPVSHQKEAPHICLRSSGPG*ARAPTP Trigger: CGGCGTTGGAGCCCGAGCGCAGCCTGGGCCGCTTGA...CCTTAAACAAATATGAGGTGCTTCTTTCTGATGGGACACTGGGTCAGGTGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS-3UTR TCA 90 bp | AATGTTTACAATGAAGTCTCTGTGAAAGCAAGGTTCTCAAAGACTCTCATTCTTCCGCGGGTGCCGGGATaGGGGCGGGCGGAGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: NVYNEVSVKARFSKTLILPRVPG*GRAERW Trigger: CCATCTCTCCGCCCGCCCTCATCCCGGCACCCGCGG...AAGAATGAGAGTCTTTGAGAACCTTGCTTTCACAGAGACTTCATTGTAAACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS-3UTR GCA 90 bp | GGAGACAGTCTCAGCCTCAGAGCTGAGGAACAGGGCTTTAGTGGTATCAGTGGAACAAGCAGACCGTCCTaGATTGCTGTATCACCTATT | + |
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Preference number: 4 (lower is better) Translates to: GDSLSLRAEEQGFSGISGTSRPS*IAVSPI Trigger: AATAGGTGATACAGCAATGCAGGACGGTCTGCTTGT...TCCACTGATACCACTAAAGCCCTGTTCCTCAGCTCTGAGGCTGAGACTGTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026032.7 |
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| CDS-3UTR TCA 90 bp | GTGACACCTGACCCAGTGTCCCATCAGAAAGAAGCACCTCATATTTGTTTAAGGAGTGATCCCCACAGATaGTATCTACCTGACAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VTPDPVSHQKEAPHICLRSDPHR*YLPDKL Trigger: CAGCTTGTCAGGTAGATATCATCTGTGGGGATCACT...CCTTAAACAAATATGAGGTGCTTCTTTCTGATGGGACACTGGGTCAGGTGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026032.7 |
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| CDS-3UTR CCA 90 bp | TTTGTGACACCTGACCCAGTGTCCCATCAGAAAGAAGCACCTCATATTTGTTTAAGACGCAGAGAGAAGTaGCTCATCTCTTCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: FVTPDPVSHQKEAPHICLRRREK*LISSSS Trigger: GGAGGAGGAAGAGATGAGCCACTTCTCTCTGCGTCT...TAAACAAATATGAGGTGCTTCTTTCTGATGGGACACTGGGTCAGGTGTCACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS-3UTR CCA 90 bp | GTAGCAAATACATTCTATTGTTTCAAGTTGTACACACACAATGCTAGGGTTCTGAGACGCAGAGAGAAGTaGCTCATCTCTTCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VANTFYCFKLYTHNARVLRRREK*LISSSS Trigger: GGAGGAGGAAGAGATGAGCCACTTCTCTCTGCGTCT...CAGAACCCTAGCATTGTGTGTGTACAACTTGAAACAATAGAATGTATTTGCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| 3UTR CAA 72 bp | GCTGAGGAACAGGGCTTTAGTGGTATCAGTGGAATTTaGTTTGAAGTTCAGAATAGGACAGGAACTTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: AEEQGFSGISGI*FEVQNRTGTCK Trigger: CTTACAAGTTCCTGTCCTATTCTGAACTTCAAACAAAATTCCACTGATACCACTAAAGCCCTGTTCCTCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS-3UTR TCA 90 bp | TTGCTACTGTTAGAAGCAGTGCCATCATTCACAGCCACACTGAGGGAATTTTGTCTTTTACAAAAGGTATaGAGACACTCTGTAATGGTG | + |
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Preference number: 4 (lower is better) Translates to: LLLLEAVPSFTATLREFCLLQKV*RHSVMV Trigger: CACCATTACAGAGTGTCTTCATACCTTTTGTAAAAG...ACAAAATTCCCTCAGTGTGGCTGTGAATGATGGCACTGCTTCTAACAGTAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS-3UTR GCA 90 bp | GTAGCAAATACATTCTATTGTTTCAAGTTGTACACACACAATGCTAGGGTTCTGCTATCAGGTAACCTTTaGAAATCGAACACAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: VANTFYCFKLYTHNARVLLSGNL*KSNTGC Trigger: ACATCCTGTGTTCGATTTGCAAAGGTTACCTGATAG...CAGAACCCTAGCATTGTGTGTGTACAACTTGAAACAATAGAATGTATTTGCTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS-3UTR CCA 90 bp | GAACAGGGCTTTAGTGGTATCAGTGGAATTTTGTTTGAAGTTCAGAATAGGACAAAACTTCTTTTCCAATaGCTTAAAATGTCCGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: EQGFSGISGILFEVQNRTKLLFQ*LKMSGV Trigger: GACACCGGACATTTTAAGCCATTGGAAAAGAAGTTT...TGTCCTATTCTGAACTTCAAACAAAATTCCACTGATACCACTAAAGCCCTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000026032.7 |
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| 3UTR CAA 72 bp | GTCTTTAGTGTAGCAAATACATTCTATTGTTTCAAGTaGTACACACACAATGCTAGGGTTCTGGTGACAACA | + |
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Preference number: 4 (lower is better) Translates to: VFSVANTFYCFK*YTHNARVLVTT Trigger: TGTTGTCACCAGAACCCTAGCATTGTGTGTGTACAACTTGAAACAATAGAATGTATTTGCTACACTAAAGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS-3UTR TCA 90 bp | GTAGCAAATACATTCTATTGTTTCAAGTTGTACACACACAATGCTAGGGTTCTGCTTTTACAAAAGGTATaGAGACACTCTGTAATGGTG | + |
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Preference number: 4 (lower is better) Translates to: VANTFYCFKLYTHNARVLLLQKV*RHSVMV Trigger: CACCATTACAGAGTGTCTTCATACCTTTTGTAAAAG...CAGAACCCTAGCATTGTGTGTGTACAACTTGAAACAATAGAATGTATTTGCTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS-3UTR GCA 90 bp | GTTTACAATGAAGTCTCTGTGAAAGCAAGGTTCTCAAAGACTCTCATTCTTTATCTATCAGGTAACCTTTaGAAATCGAACACAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: VYNEVSVKARFSKTLILYLSGNL*KSNTGC Trigger: ACATCCTGTGTTCGATTTGCAAAGGTTACCTGATAG...ATAAAGAATGAGAGTCTTTGAGAACCTTGCTTTCACAGAGACTTCATTGTAAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS GCA 90 bp | ACTCTTCATCGTAGTCCTCGAAGCGGCCTCTCAAGCGGCCCAGGCTaGGCTCGGGCTCCAACGCCGGGGGCCGAGAGCGAGAGCAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: TLHRSPRSGLSSGPG*ARAPTPGAESESSR Trigger: CCGGCTGCTCTCGCTCTCGGCCCCCGGCGTTGGAGCCCGAGCGCAGCCTGGGCCGCTTGAGAGGCCGCTTCGAGGACTACGATGAAGAGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS-3UTR CAA 90 bp | GAGCTGAGGAACAGGGCTTTAGTGGTATCAGTGGAATTTTGTTTGAAGTTCAGAATGGCTGAGGCTCGCTaGGCCTCAGAGGCGCGCTTG | + |
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Preference number: 5 (lower is better) Translates to: ELRNRALVVSVEFCLKFRMAEAR*ASEARL Trigger: CAAGCGCGCCTCTGAGGCCAAGCGAGCCTCAGCCAT...TCTGAACTTCAAACAAAATTCCACTGATACCACTAAAGCCCTGTTCCTCAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS-3UTR CAA 90 bp | TTTGTGACACCTGACCCAGTGTCCCATCAGAAAGAAGCACCTCATATTTGTTTAATGGCTGAGGCTCGCTaGGCCTCAGAGGCGCGCTTG | + |
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Preference number: 5 (lower is better) Translates to: FVTPDPVSHQKEAPHICLMAEAR*ASEARL Trigger: CAAGCGCGCCTCTGAGGCCAAGCGAGCCTCAGCCAT...TAAACAAATATGAGGTGCTTCTTTCTGATGGGACACTGGGTCAGGTGTCACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS-3UTR CAA 90 bp | TCAAAGCAAAGCTGTTCTGAAGGAAACCACCCAGCCCATGCAGCTGGAGGGCAGTTCATTAGCACAGGCTaGGGGACTTCTAGACCTCTT | + |
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Preference number: 5 (lower is better) Translates to: SKQSCSEGNHPAHAAGGQFISTG*GTSRPL Trigger: AAGAGGTCTAGAAGTCCCCAAGCCTGTGCTAATGAA...CTGCCCTCCAGCTGCATGGGCTGGGTGGTTTCCTTCAGAACAGCTTTGCTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235633.2 |
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| CDS-3UTR CAA 90 bp | TGCAGATATGCAGATGCCTCCGACTGGGTTTCTCTCCTCATATACCTTTGCATCCAACTATGTTGCATTTaGGGCATCTGTTACTATAGT | + |
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Preference number: 5 (lower is better) Translates to: CRYADASDWVSLLIYLCIQLCCI*GICYYS Trigger: ACTATAGTAACAGATGCCCAAAATGCAACATAGTTG...GATGCAAAGGTATATGAGGAGAGAAACCCAGTCGGAGGCATCTGCATATCTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS-3UTR CAA 90 bp | AATGTTTACAATGAAGTCTCTGTGAAAGCAAGGTTCTCAAAGACTCTCATTCTTTGTGGAGCAGCAGGCTaGGGGACTTCTAGACCTCTT | + |
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Preference number: 5 (lower is better) Translates to: NVYNEVSVKARFSKTLILCGAAG*GTSRPL Trigger: AAGAGGTCTAGAAGTCCCCAAGCCTGCTGCTCCACA...AAGAATGAGAGTCTTTGAGAACCTTGCTTTCACAGAGACTTCATTGTAAACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026032.7 |
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| CDS-3UTR CAA 90 bp | CAGGGCTTTAGTGGTATCAGTGGAATTTTGTTTGAAGTTCAGAATAGGACAGGACAACTATGTTGCATTTaGGGCATCTGTTACTATAGT | + |
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Preference number: 5 (lower is better) Translates to: QGFSGISGILFEVQNRTGQLCCI*GICYYS Trigger: ACTATAGTAACAGATGCCCAAAATGCAACATAGTTG...TCCTGTCCTATTCTGAACTTCAAACAAAATTCCACTGATACCACTAAAGCCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS GCA 72 bp | CGTAGTCCTCGAAGCGGCCTCTCAAGCGGCCCAGGCTaGGCTCGGGCTCCAACGCCGGGGGCCGAGAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: RSPRSGLSSGPG*ARAPTPGAESE Trigger: CTCGCTCTCGGCCCCCGGCGTTGGAGCCCGAGCGCAGCCTGGGCCGCTTGAGAGGCCGCTTCGAGGACTACG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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| CDS CCA 72 bp | GAGGCGGTGGCGGTGGCGGCATGGCTGAGGCTCGCTTaGCCTCAGAGGCGCGCTTGTTTTCCGTGGCGTCCG | + |
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Preference number: 6 (lower is better) Translates to: EAVAVAAWLRLA*PQRRACFPWRP Trigger: CGGACGCCACGGAAAACAAGCGCGCCTCTGAGGCCAAGCGAGCCTCAGCCATGCCGCCACCGCCACCGCCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026032.7 ENSMUST00000235633.2 |
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