Pregenerated sensors for PCGF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018537Ensembl transcript IDs: ENSMUST00000018681.14, ENSMUST00000103148.8, ENSMUST00000103149.9, ENSMUST00000169807.8, ENSMUST00000179765.8
Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR TCA 90 bp | GGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTGGGGCTTCCACTGTCTaGGGAGGTGAGGGAAATGCC | + |
Preference number: 2 (lower is better) Translates to: GLLAFGRTGVCACLGPPSGASTV*GGEGNA Trigger: GGCATTTCCCTCACCTCCTCAGACAGTGGAAGCCCC...AGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR-3UTR CCA 90 bp | CTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACGTGGTGCAAACACTGCCTGGCCTCAGCTaGGGGGTGAGGCAGTGGACT | + |
Preference number: 2 (lower is better) Translates to: LGQEGTVTGPQTQDVVQTLPGLS*GVRQWT Trigger: AGTCCACTGCCTCACCCCCCAGCTGAGGCCAGGCAG...TGTTTGCACCACGTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR-3UTR GCA 90 bp | TTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTAGGCCCCCCACTTGGTCCTCACTaGCAGAGGACACAGACTGCA | + |
Preference number: 2 (lower is better) Translates to: FGRTGVCACLGPPSTLGPPLGPH*QRTQTA Trigger: TGCAGTCTGTGTCCTCTGGCAGTGAGGACCAAGTGG...GGGGCCTAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR-3UTR CCA 90 bp | GTACAGTCACAGGACCTCAGACTCAGGACGTGGTGCAAACAGACCCATGGGCTCGGTGAGGCAGTGGACTaGAGGGCTGTTGGCTTTTGG | + |
Preference number: 2 (lower is better) Translates to: VQSQDLRLRTWCKQTHGLGEAVD*RAVGFW Trigger: CCAAAAGCCAACAGCCCTCCAGTCCACTGCCTCACC...GAGCCCATGGGTCTGTTTGCACCACGTCCTGAGTCTGAGGTCCTGTGACTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR-3UTR TCA 90 bp | TTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTAGGCCCCCACTGTCTGAGGAGGTaGGGGAAATGCCTTCTTCAC | + |
Preference number: 2 (lower is better) Translates to: FGRTGVCACLGPPSTLGPHCLRR*GKCLLH Trigger: GTGAAGAAGGCATTTCCCTCACCTCCTCAGACAGTG...GGGGCCTAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR-3UTR CCA 90 bp | GTACAGTCACAGGACCTCAGACTCAGGACGTGGTGCAAACAGACCCATGGGCTCGGGTTTGGACAGGTATaGGGAACAGCCAAGATGGAC | + |
Preference number: 2 (lower is better) Translates to: VQSQDLRLRTWCKQTHGLGFGQV*GTAKMD Trigger: GTCCATCTTGGCTGTTCCCCATACCTGTCCAAACCC...GAGCCCATGGGTCTGTTTGCACCACGTCCTGAGTCTGAGGTCCTGTGACTGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR-3UTR TCA 90 bp | CTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACGTGGTGCAAACACACAGACTGCATTTGTaGAAGGCACTGACTGTCTCA | + |
Preference number: 2 (lower is better) Translates to: LGQEGTVTGPQTQDVVQTHRLHL*KALTVS Trigger: TGAGACAGTCAGTGCCTTTCACAAATGCAGTCTGTG...TGTTTGCACCACGTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR-3UTR TCA 90 bp | CTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACGTGGTGCAAACAAAATCTATGTACACTTaGGGAAGAGCAGGCGAGAGC | + |
Preference number: 2 (lower is better) Translates to: LGQEGTVTGPQTQDVVQTKSMYT*GRAGES Trigger: GCTCTCGCCTGCTCTTCCTCAAGTGTACATAGATTT...TGTTTGCACCACGTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR-3UTR GCA 90 bp | GATATAAATGACCTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACCCACTTGGTCCTCACTaGCAGAGGACACAGACTGCA | + |
Preference number: 2 (lower is better) Translates to: DINDLGQEGTVTGPQTQDPLGPH*QRTQTA Trigger: TGCAGTCTGTGTCCTCTGGCAGTGAGGACCAAGTGG...GTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAGGTCATTTATATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAAAGGAGGGAAAAGATaGCTGCGGAAGGAGAGGGTC | + |
Preference number: 2 (lower is better) Translates to: KPTSHSENGRNQGKSKVEKGGKR*LRKERV Trigger: GACCCTCTCCTTCCGCAGCCATCTTTTCCCTCCTTT...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR-3UTR CCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAAAAGGAGGGAAAAGATaGCTGCGGAAGGAGAGGGTC | + |
Preference number: 2 (lower is better) Translates to: NPPPTLKMGGTRESQKWKKGGKR*LRKERV Trigger: GACCCTCTCCTTCCGCAGCCATCTTTTCCCTCCTTT...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR-3UTR TCA 90 bp | TTCTTTTATTTTCTTGTGCTTCTAGATGCCTCTGTCCTATCCCTGCCTGGCCTCCACTGTCTGAGGAGGTaGGGGAAATGCCTTCTTCAC | + |
Preference number: 2 (lower is better) Translates to: FFYFLVLLDASVLSLPGLHCLRR*GKCLLH Trigger: GTGAAGAAGGCATTTCCCTCACCTCCTCAGACAGTG...GAGGCCAGGCAGGGATAGGACAGAGGCATCTAGAAGCACAAGAAAATAAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR-3UTR CCA 90 bp | TTCTTTTATTTTCTTGTGCTTCTAGATGCCTCTGTCCTATCCCTGCCTGGCCTCAAAGGAGGGAAAAGATaGCTGCGGAAGGAGAGGGTC | + |
Preference number: 2 (lower is better) Translates to: FFYFLVLLDASVLSLPGLKGGKR*LRKERV Trigger: GACCCTCTCCTTCCGCAGCCATCTTTTCCCTCCTTT...GAGGCCAGGCAGGGATAGGACAGAGGCATCTAGAAGCACAAGAAAATAAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR-3UTR TCA 90 bp | CCAAGAGATATAAATGACCTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCACAGACTGCATTTGTaGAAGGCACTGACTGTCTCA | + |
Preference number: 2 (lower is better) Translates to: PRDINDLGQEGTVTGPQTHRLHL*KALTVS Trigger: TGAGACAGTCAGTGCCTTTCACAAATGCAGTCTGTG...AGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAGGTCATTTATATCTCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR-3UTR CCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAAAAGGAGGGAAAAGATaGCTGCGGAAGGAGAGGGTC | + |
Preference number: 2 (lower is better) Translates to: FIKPTSHSENGRNQGKSKKGGKR*LRKERV Trigger: GACCCTCTCCTTCCGCAGCCATCTTTTCCCTCCTTT...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 47% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR CCA 72 bp | CTAGATGCCTCTGTCCTATCCCTGCCTGGCCTCAGCTaGGGGGTGAGGCAGTGGACTGGAGGGCTGTTGGCT | + |
Preference number: 3 (lower is better) Translates to: LDASVLSLPGLS*GVRQWTGGLLA Trigger: AGCCAACAGCCCTCCAGTCCACTGCCTCACCCCCCAGCTGAGGCCAGGCAGGGATAGGACAGAGGCATCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR-3UTR CAA 90 bp | TTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTAGGCCCCCTTCTTCACAGCCACTaGGTCCTCACTGCCAGAGGA | + |
Preference number: 3 (lower is better) Translates to: FGRTGVCACLGPPSTLGPLLHSH*VLTARG Trigger: TCCTCTGGCAGTGAGGACCAAGTGGCTGTGAAGAAG...GGGGCCTAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR CCA 72 bp | AGGAGGGTACAGTCACAGGACCTCAGACTCAGGACGTaGTGCAAACAGACCCATGGGCTCAGAACCTCACAC | + |
Preference number: 3 (lower is better) Translates to: RRVQSQDLRLRT*CKQTHGLRTSH Trigger: GTGTGAGGTTCTGAGCCCATGGGTCTGTTTGCACCACGTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR GCA 72 bp | AGGGTACAGTCACAGGACCTCAGACTCAGGACGTGGTaGAAACAGACCCATGGGCTCAGAACCTCACACACT | + |
Preference number: 3 (lower is better) Translates to: RVQSQDLRLRTW*KQTHGLRTSHT Trigger: AGTGTGTGAGGTTCTGAGCCCATGGGTCTGTTTGCACCACGTCCTGAGTCTGAGGTCCTGTGACTGTACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR-3UTR CAA 90 bp | GTACAGTCACAGGACCTCAGACTCAGGACGTGGTGCAAACAGACCCATGGGCTCGTCCACCAGGTAGAGTaGGGGTCAGCTCATTCTTTT | + |
Preference number: 3 (lower is better) Translates to: VQSQDLRLRTWCKQTHGLVHQVE*GSAHSF Trigger: AAAAGAATGAGCTGACCCCAACTCTACCTGGTGGAC...GAGCCCATGGGTCTGTTTGCACCACGTCCTGAGTCTGAGGTCCTGTGACTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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3UTR TCA 72 bp | ATATATAGATTTATTTATAAAACCCACCTCCCACTCTaGAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGA | + |
Preference number: 3 (lower is better) Translates to: IYRFIYKTHLPL*KWEEPGKVKSG Trigger: TCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAATAAATCTATATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | GGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTGGGGGCCGTGGGAGCTaGGAGAGCCATGGGATGGGG | + |
Preference number: 4 (lower is better) Translates to: GLLAFGRTGVCACLGPPSGGRGS*ESHGMG Trigger: CCCCATCCCATGGCTCTCCCAGCTCCCACGGCCCCC...AGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTAGGCCCCAGGTGGCCGGAAGGGTaGCAGGGCTGGGAGCCTTGT | + |
Preference number: 4 (lower is better) Translates to: FGRTGVCACLGPPSTLGPRWPEG*QGWEPC Trigger: ACAAGGCTCCCAGCCCTGCCACCCTTCCGGCCACCT...GGGGCCTAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | GGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTATGGGGTCGCAGGGCTaGGCAAGGAGGAGGAGGTGG | + |
Preference number: 4 (lower is better) Translates to: GLLAFGRTGVCACLGPPSMGSQG*ARRRRW Trigger: CCACCTCCTCCTCCTTGCCCAGCCCTGCGACCCCAT...AGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | TTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTAGCACCGTGGGCAGGGTaGGCCGCTTGCAGGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: LAFGRTGVCACLGPPSTLAPWAG*AACRLA Trigger: AGCCAGCCTGCAAGCGGCTCACCCTGCCCACGGTGC...TAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | AGGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCCCCCGCTGGTGTTGGTaGCTTCTGAGGGGGTTGGCA | + |
Preference number: 4 (lower is better) Translates to: RAVGFWQNWSLCLSGATLPRWCW*LLRGLA Trigger: TGCCAACCCCCTCAGAAGGCACCAACACCAGCGGGG...GAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | CTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACGTGGTGCAAACAGCAAGGAGGAGGAGGTaGCCGGAAGGGTGGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: LGQEGTVTGPQTQDVVQTARRRR*PEGWQG Trigger: GCCCTGCCACCCTTCCGGCCACCTCCTCCTCCTTGC...TGTTTGCACCACGTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | GGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTCATGACGGTCATGGCTaGTGGGCACCGCAGGAATCG | + |
Preference number: 4 (lower is better) Translates to: GLLAFGRTGVCACLGPPSHDGHG*WAPQES Trigger: CGATTCCTGCGGTGCCCAGCAGCCATGACCGTCATG...AGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | GAGGCAGTGGACTGGAGGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGCCCCGCTGGTGTTGGTaGCTTCTGAGGGGGTTGGCA | + |
Preference number: 4 (lower is better) Translates to: EAVDWRAVGFWQNWSLCLPRWCW*LLRGLA Trigger: TGCCAACCCCCTCAGAAGGCACCAACACCAGCGGGG...CAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCCTCCAGTCCACTGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTAGGCCCCGAGCCGCTTGCAGGCTaGCTGGACACGGTACTTGAG | + |
Preference number: 4 (lower is better) Translates to: FGRTGVCACLGPPSTLGPEPLAG*LDTVLE Trigger: CTCAAGTACCGTGTCCAGCCAGCCTGCAAGCGGCTC...GGGGCCTAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | GATATAAATGACCTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACGCACCGTGGGCAGGGTaGGCCGCTTGCAGGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: DINDLGQEGTVTGPQTQDAPWAG*AACRLA Trigger: AGCCAGCCTGCAAGCGGCTCACCCTGCCCACGGTGC...GTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAGGTCATTTATATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | CTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACGTGGTGCAAACAGGTCCCAGCGGCAGTTaGAGGTGGAGTGGGGGAAGT | + |
Preference number: 4 (lower is better) Translates to: LGQEGTVTGPQTQDVVQTGPSGS*RWSGGS Trigger: ACTTCCCCCACTCCACCTTCAACTGCCGCTGGGACC...TGTTTGCACCACGTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | TTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTAGGCCCCTCATCTTGCGCCCCCTaGTGGTGGAGGATGGCGTTT | + |
Preference number: 4 (lower is better) Translates to: FGRTGVCACLGPPSTLGPSSCAP*WWRMAF Trigger: AAACGCCATCCTCCACCAGCAGGGGGCGCAAGATGA...GGGGCCTAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | AGGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTCATCTTGCGCCCCCTaGTGGTGGAGGATGGCGTTT | + |
Preference number: 4 (lower is better) Translates to: RAVGFWQNWSLCLSGATLSSCAP*WWRMAF Trigger: AAACGCCATCCTCCACCAGCAGGGGGCGCAAGATGA...GAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | CTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACGTGGTGCAAACACGCTTGCAGGCTGGCTaGACACGGTACTTGAGGGGG | + |
Preference number: 4 (lower is better) Translates to: LGQEGTVTGPQTQDVVQTRLQAG*TRYLRG Trigger: CCCCCTCAAGTACCGTGTCCAGCCAGCCTGCAAGCG...TGTTTGCACCACGTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | GGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTCCTGCTGGTGGAGGATaGCGTTTGCAGGCAGTTCGA | + |
Preference number: 4 (lower is better) Translates to: GLLAFGRTGVCACLGPPSPAGGG*RLQAVR Trigger: TCGAACTGCCTGCAAACGCCATCCTCCACCAGCAGG...AGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTATGCGCCCCCTGCTGGTaGAGGATGGCGTTTGCAGGC | + |
Preference number: 4 (lower is better) Translates to: LAFGRTGVCACLGPPSTLCAPCW*RMAFAG Trigger: GCCTGCAAACGCCATCCTCCACCAGCAGGGGGCGCA...TAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | GAGGCAGTGGACTGGAGGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTTGCGCCCCCTGCTaGTGGAGGATGGCGTTTGCA | + |
Preference number: 4 (lower is better) Translates to: EAVDWRAVGFWQNWSLCLSCAPC*WRMAFA Trigger: TGCAAACGCCATCCTCCACCAGCAGGGGGCGCAAGA...CAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCCTCCAGTCCACTGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAGCACCGTGGGCAGGGTaGGCCGCTTGCAGGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVEAPWAG*AACRLA Trigger: AGCCAGCCTGCAAGCGGCTCACCCTGCCCACGGTGC...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAGCACCGTGGGCAGGGTaGGCCGCTTGCAGGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKAPWAG*AACRLA Trigger: AGCCAGCCTGCAAGCGGCTCACCCTGCCCACGGTGC...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | TTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTAGGCCCCCTCTGTCAGGGGGTATaGTGCATAGAAGTCCCGTCG | + |
Preference number: 4 (lower is better) Translates to: FGRTGVCACLGPPSTLGPLCQGV*CIEVPS Trigger: CGACGGGACTTCTATGCAGCATACCCCCTGACAGAG...GGGGCCTAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | CTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACGTGGTGCAAACAATGCCCCGCTGGTGTTaGTGCCTTCTGAGGGGGTTG | + |
Preference number: 4 (lower is better) Translates to: LGQEGTVTGPQTQDVVQTMPRWC*CLLRGL Trigger: CAACCCCCTCAGAAGGCACCAACACCAGCGGGGCAT...TGTTTGCACCACGTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | GAGGCAGTGGACTGGAGGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGACTCTGATGCCCCGCTaGTGTTGGTGCCTTCTGAGG | + |
Preference number: 4 (lower is better) Translates to: EAVDWRAVGFWQNWSLCLTLMPR*CWCLLR Trigger: CCTCAGAAGGCACCAACACCAGCGGGGCATCAGAGT...CAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCCTCCAGTCCACTGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | GATATAAATGACCTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACGCAAGGAGGAGGAGGTaGCCGGAAGGGTGGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: DINDLGQEGTVTGPQTQDARRRR*PEGWQG Trigger: GCCCTGCCACCCTTCCGGCCACCTCCTCCTCCTTGC...GTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAGGTCATTTATATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAGGGGGCCGTGGGAGCTaGGAGAGCCATGGGATGGGG | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKGGRGS*ESHGMG Trigger: CCCCATCCCATGGCTCTCCCAGCTCCCACGGCCCCC...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | GATATAAATGACCTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACCGCCTCGGTCCTCGTTaGAGCCGTTGGGGACCTCTG | + |
Preference number: 4 (lower is better) Translates to: DINDLGQEGTVTGPQTQDRLGPR*SRWGPL Trigger: CAGAGGTCCCCAACGGCTCCAACGAGGACCGAGGCG...GTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAGGTCATTTATATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAGCAAGGAGGAGGAGGTaGCCGGAAGGGTGGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVEARRRR*PEGWQG Trigger: GCCCTGCCACCCTTCCGGCCACCTCCTCCTCCTTGC...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | GATATAAATGACCTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACATGGGGTCGCAGGGCTaGGCAAGGAGGAGGAGGTGG | + |
Preference number: 4 (lower is better) Translates to: DINDLGQEGTVTGPQTQDMGSQG*ARRRRW Trigger: CCACCTCCTCCTCCTTGCCCAGCCCTGCGACCCCAT...GTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAGGTCATTTATATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CCA 90 bp | TTCTTTTATTTTCTTGTGCTTCTAGATGCCTCTGTCCTATCCCTGCCTGGCCTCGGGGGCCGTGGGAGCTaGGAGAGCCATGGGATGGGG | + |
Preference number: 4 (lower is better) Translates to: FFYFLVLLDASVLSLPGLGGRGS*ESHGMG Trigger: CCCCATCCCATGGCTCTCCCAGCTCCCACGGCCCCC...GAGGCCAGGCAGGGATAGGACAGAGGCATCTAGAAGCACAAGAAAATAAAAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | GATATAAATGACCTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACAGTAGGATGGGTAGCTaGGGGGCCGTGGGAGCTGGG | + |
Preference number: 4 (lower is better) Translates to: DINDLGQEGTVTGPQTQDSRMGS*GAVGAG Trigger: CCCAGCTCCCACGGCCCCCCAGCTACCCATCCTACT...GTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAGGTCATTTATATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | GATATAAATGACCTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACTGCGCCCCCTGCTGGTaGAGGATGGCGTTTGCAGGC | + |
Preference number: 4 (lower is better) Translates to: DINDLGQEGTVTGPQTQDCAPCW*RMAFAG Trigger: GCCTGCAAACGCCATCCTCCACCAGCAGGGGGCGCA...GTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAGGTCATTTATATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | GTACAGTCACAGGACCTCAGACTCAGGACGTGGTGCAAACAGACCCATGGGCTCAGGAACTTTGCCAGGTaGATGACGGTCATGGCTGCT | + |
Preference number: 4 (lower is better) Translates to: VQSQDLRLRTWCKQTHGLRNFAR*MTVMAA Trigger: AGCAGCCATGACCGTCATGCACCTGGCAAAGTTCCT...GAGCCCATGGGTCTGTTTGCACCACGTCCTGAGTCTGAGGTCCTGTGACTGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | GAGGCAGTGGACTGGAGGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGAGGAACTTTGCCAGGTaGATGACGGTCATGGCTGCT | + |
Preference number: 4 (lower is better) Translates to: EAVDWRAVGFWQNWSLCLRNFAR*MTVMAA Trigger: AGCAGCCATGACCGTCATGCACCTGGCAAAGTTCCT...CAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCCTCCAGTCCACTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAACGCCTCGGTCCTCGTTaGAGCCGTTGGGGACCTCTG | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKRLGPR*SRWGPL Trigger: CAGAGGTCCCCAACGGCTCCAACGAGGACCGAGGCG...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAAGGTGGCCGGAAGGGTaGCAGGGCTGGGAGCCTTGT | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKRWPEG*QGWEPC Trigger: ACAAGGCTCCCAGCCCTGCCACCCTTCCGGCCACCT...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAGGTGGCCGGAAGGGTaGCAGGGCTGGGAGCCTTGT | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVERWPEG*QGWEPC Trigger: ACAAGGCTCCCAGCCCTGCCACCCTTCCGGCCACCT...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAATGGGGTCGCAGGGCTaGGCAAGGAGGAGGAGGTGG | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVEMGSQG*ARRRRW Trigger: CCACCTCCTCCTCCTTGCCCAGCCCTGCGACCCCAT...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAGAGCTGGGAGAGCCATaGGATGGGGTCGCAGGGCTG | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVEELGEP*DGVAGL Trigger: CAGCCCTGCGACCCCATCCCATGGCTCTCCCAGCTC...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAGAGCTGGGAGAGCCATaGGATGGGGTCGCAGGGCTG | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKELGEP*DGVAGL Trigger: CAGCCCTGCGACCCCATCCCATGGCTCTCCCAGCTC...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | CCAAGAGATATAAATGACCTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTGAGCTGGGAGAGCCATaGGATGGGGTCGCAGGGCTG | + |
Preference number: 4 (lower is better) Translates to: PRDINDLGQEGTVTGPQTELGEP*DGVAGL Trigger: CAGCCCTGCGACCCCATCCCATGGCTCTCCCAGCTC...AGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAGGTCATTTATATCTCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAGTAGGATGGGTAGCTaGGGGGCCGTGGGAGCTGGG | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVESRMGS*GAVGAG Trigger: CCCAGCTCCCACGGCCCCCCAGCTACCCATCCTACT...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAATGCGCCCCCTGCTGGTaGAGGATGGCGTTTGCAGGC | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVECAPCW*RMAFAG Trigger: GCCTGCAAACGCCATCCTCCACCAGCAGGGGGCGCA...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAATGCGCCCCCTGCTGGTaGAGGATGGCGTTTGCAGGC | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKCAPCW*RMAFAG Trigger: GCCTGCAAACGCCATCCTCCACCAGCAGGGGGCGCA...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAGGTCCCAGCGGCAGTTaGAGGTGGAGTGGGGGAAGT | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVEGPSGS*RWSGGS Trigger: ACTTCCCCCACTCCACCTTCAACTGCCGCTGGGACC...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAGGTCCCAGCGGCAGTTaGAGGTGGAGTGGGGGAAGT | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKGPSGS*RWSGGS Trigger: ACTTCCCCCACTCCACCTTCAACTGCCGCTGGGACC...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAACCCCGCTGGTGTTGGTaGCTTCTGAGGGGGTTGGCA | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKPRWCW*LLRGLA Trigger: TGCCAACCCCCTCAGAAGGCACCAACACCAGCGGGG...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AGGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTGGGGCAGTATTTGTTaGTCTCCAAGTAGCGTACGA | + |
Preference number: 4 (lower is better) Translates to: RAVGFWQNWSLCLSGATLWGSIC*SPSSVR Trigger: TCGTACGCTACTTGGAGACCAACAAATACTGCCCCA...GAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | GGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTAGTGGTCGAGTTTTATaGACCTGGACGTCACACATG | + |
Preference number: 4 (lower is better) Translates to: GLLAFGRTGVCACLGPPSSGRVL*TWTSHM Trigger: CATGTGTGACGTCCAGGTCCATAAAACTCGACCACT...AGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AGGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCAGTGGTCGAGTTTTATaGACCTGGACGTCACACATG | + |
Preference number: 4 (lower is better) Translates to: RAVGFWQNWSLCLSGATLSGRVL*TWTSHM Trigger: CATGTGTGACGTCCAGGTCCATAAAACTCGACCACT...GAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAGACGGTCATGGCTGCTaGGCACCGCAGGAATCGCAC | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVEDGHGC*APQESH Trigger: GTGCGATTCCTGCGGTGCCCAGCAGCCATGACCGTC...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAGACGGTCATGGCTGCTaGGCACCGCAGGAATCGCAC | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKDGHGC*APQESH Trigger: GTGCGATTCCTGCGGTGCCCAGCAGCCATGACCGTC...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAACGCTTGCAGGCTGGCTaGACACGGTACTTGAGGGGG | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKRLQAG*TRYLRG Trigger: CCCCCTCAAGTACCGTGTCCAGCCAGCCTGCAAGCG...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAACGCTTGCAGGCTGGCTaGACACGGTACTTGAGGGGG | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVERLQAG*TRYLRG Trigger: CCCCCTCAAGTACCGTGTCCAGCCAGCCTGCAAGCG...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | GATATAAATGACCTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACATGCCCCGCTGGTGTTaGTGCCTTCTGAGGGGGTTG | + |
Preference number: 4 (lower is better) Translates to: DINDLGQEGTVTGPQTQDMPRWC*CLLRGL Trigger: CAACCCCCTCAGAAGGCACCAACACCAGCGGGGCAT...GTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAGGTCATTTATATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAACACAGAGGGCACACATaGGGTGAGGGTTCAGCTCCG | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVEHRGHT*GEGSAP Trigger: CGGAGCTGAACCCTCACCTCATGTGTGCCCTCTGTG...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAACACAGAGGGCACACATaGGGTGAGGGTTCAGCTCCG | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKHRGHT*GEGSAP Trigger: CGGAGCTGAACCCTCACCTCATGTGTGCCCTCTGTG...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | TTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTAGGGTTTTGTCTGATCTaGTGCTCAGCAGTGGTCGAG | + |
Preference number: 4 (lower is better) Translates to: LAFGRTGVCACLGPPSTLGFCLI*CSAVVE Trigger: CTCGACCACTGCTGAGCATCAGATCAGACAAAACCC...TAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAACTTTGCCAGGTGCATaGCGGTCATGGCTGCTGGGC | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKTLPGA*RSWLLG Trigger: GCCCAGCAGCCATGACCGTCATGCACCTGGCAAAGT...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | AGGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCCCAAGTAGCGTACGATaGAGGTTTTGCAGAAGGAAT | + |
Preference number: 4 (lower is better) Translates to: RAVGFWQNWSLCLSGATLPSSVR*RFCRRN Trigger: ATTCCTTCTGCAAAACCTGCATCGTACGCTACTTGG...GAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAACATGACGGTCATGGCTaGTGGGCACCGCAGGAATCG | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKHDGHG*WAPQES Trigger: CGATTCCTGCGGTGCCCAGCAGCCATGACCGTCATG...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | CCAAGAGATATAAATGACCTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCATGACGGTCATGGCTaGTGGGCACCGCAGGAATCG | + |
Preference number: 4 (lower is better) Translates to: PRDINDLGQEGTVTGPQTHDGHG*WAPQES Trigger: CGATTCCTGCGGTGCCCAGCAGCCATGACCGTCATG...AGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAGGTCATTTATATCTCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | GAGGCAGTGGACTGGAGGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTGGGGCAGTATTTGTTaGTCTCCAAGTAGCGTACGA | + |
Preference number: 4 (lower is better) Translates to: EAVDWRAVGFWQNWSLCLWGSIC*SPSSVR Trigger: TCGTACGCTACTTGGAGACCAACAAATACTGCCCCA...CAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCCTCCAGTCCACTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTACGAGTTTTATGGACCTaGACGTCACACATGGGGCAG | + |
Preference number: 4 (lower is better) Translates to: LAFGRTGVCACLGPPSTLRVLWT*TSHMGQ Trigger: CTGCCCCATGTGTGACGTCCAGGTCCATAAAACTCG...TAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | GTACAGTCACAGGACCTCAGACTCAGGACGTGGTGCAAACAGACCCATGGGCTCCCACCTTGTACTTGCTaGGCACATCCATTTTGTTGC | + |
Preference number: 4 (lower is better) Translates to: VQSQDLRLRTWCKQTHGLPPCTC*AHPFCC Trigger: GCAACAAAATGGATGTGCCCAGCAAGTACAAGGTGG...GAGCCCATGGGTCTGTTTGCACCACGTCCTGAGTCTGAGGTCCTGTGACTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAGAGCCGCTTGCAGGCTaGCTGGACACGGTACTTGAG | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVEEPLAG*LDTVLE Trigger: CTCAAGTACCGTGTCCAGCCAGCCTGCAAGCGGCTC...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAATGCCCCGCTGGTGTTaGTGCCTTCTGAGGGGGTTG | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVEMPRWC*CLLRGL Trigger: CAACCCCCTCAGAAGGCACCAACACCAGCGGGGCAT...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CCA 90 bp | GATATAAATGACCTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACACTCTGATGCCCCGCTaGTGTTGGTGCCTTCTGAGG | + |
Preference number: 4 (lower is better) Translates to: DINDLGQEGTVTGPQTQDTLMPR*CWCLLR Trigger: CCTCAGAAGGCACCAACACCAGCGGGGCATCAGAGT...GTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAGGTCATTTATATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGCAAGGAGGAGGAGGTaGCCGGAAGGGTGGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKARRRR*PEGWQG Trigger: GCCCTGCCACCCTTCCGGCCACCTCCTCCTCCTTGC...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAATCTTGCGCCCCCTGCTaGTGGAGGATGGCGTTTGCA | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVESCAPC*WRMAFA Trigger: TGCAAACGCCATCCTCCACCAGCAGGGGGCGCAAGA...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | TTCTTTTATTTTCTTGTGCTTCTAGATGCCTCTGTCCTATCCCTGCCTGGCCTCACTTTGCCAGGTGCATaGCGGTCATGGCTGCTGGGC | + |
Preference number: 4 (lower is better) Translates to: FFYFLVLLDASVLSLPGLTLPGA*RSWLLG Trigger: GCCCAGCAGCCATGACCGTCATGCACCTGGCAAAGT...GAGGCCAGGCAGGGATAGGACAGAGGCATCTAGAAGCACAAGAAAATAAAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAATGTCAGGGGGTATGCTaGATAGAAGTCCCGTCGCCG | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVECQGVC*IEVPSP Trigger: CGGCGACGGGACTTCTATGCAGCATACCCCCTGACA...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR GCA 90 bp | GAGGCAGTGGACTGGAGGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTCCACCTTGTACTTaGTGGGCACATCCATTTTGT | + |
Preference number: 4 (lower is better) Translates to: EAVDWRAVGFWQNWSLCLSPPCT*WAHPFC Trigger: ACAAAATGGATGTGCCCAGCAAGTACAAGGTGGAGA...CAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCCTCCAGTCCACTGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAATCATCTTGCGCCCCCTaGTGGTGGAGGATGGCGTTT | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVESSCAP*WWRMAF Trigger: AAACGCCATCCTCCACCAGCAGGGGGCGCAAGATGA...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTCTTTTATTTTCTTGTGCTTCTAGATGCCTCTGTCCTATCCCTGCCTGGCCTCGAGCCGCTTGCAGGCTaGCTGGACACGGTACTTGAG | + |
Preference number: 4 (lower is better) Translates to: FFYFLVLLDASVLSLPGLEPLAG*LDTVLE Trigger: CTCAAGTACCGTGTCCAGCCAGCCTGCAAGCGGCTC...GAGGCCAGGCAGGGATAGGACAGAGGCATCTAGAAGCACAAGAAAATAAAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAACTCTGATGCCCCGCTaGTGTTGGTGCCTTCTGAGG | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKTLMPR*CWCLLR Trigger: CCTCAGAAGGCACCAACACCAGCGGGGCATCAGAGT...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAACTCTGATGCCCCGCTaGTGTTGGTGCCTTCTGAGG | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVETLMPR*CWCLLR Trigger: CCTCAGAAGGCACCAACACCAGCGGGGCATCAGAGT...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAATGGGGTCGCAGGGCTaGGCAAGGAGGAGGAGGTGG | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKMGSQG*ARRRRW Trigger: CCACCTCCTCCTCCTTGCCCAGCCCTGCGACCCCAT...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGAGCTGGGAGAGCCATaGGATGGGGTCGCAGGGCTG | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKELGEP*DGVAGL Trigger: CAGCCCTGCGACCCCATCCCATGGCTCTCCCAGCTC...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAAGTAGGATGGGTAGCTaGGGGGCCGTGGGAGCTGGG | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKSRMGS*GAVGAG Trigger: CCCAGCTCCCACGGCCCCCCAGCTACCCATCCTACT...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAACCTGCTGGTGGAGGATaGCGTTTGCAGGCAGTTCGA | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKPAGGG*RLQAVR Trigger: TCGAACTGCCTGCAAACGCCATCCTCCACCAGCAGG...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAACCTGCTGGTGGAGGATaGCGTTTGCAGGCAGTTCGA | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVEPAGGG*RLQAVR Trigger: TCGAACTGCCTGCAAACGCCATCCTCCACCAGCAGG...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTCTTTTATTTTCTTGTGCTTCTAGATGCCTCTGTCCTATCCCTGCCTGGCCTCTCTTGCGCCCCCTGCTaGTGGAGGATGGCGTTTGCA | + |
Preference number: 4 (lower is better) Translates to: FFYFLVLLDASVLSLPGLSCAPC*WRMAFA Trigger: TGCAAACGCCATCCTCCACCAGCAGGGGGCGCAAGA...GAGGCCAGGCAGGGATAGGACAGAGGCATCTAGAAGCACAAGAAAATAAAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAAGGGCACACATGAGGTaGGGGTTCAGCTCCGTGATT | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKRAHMR*GFSSVI Trigger: AATCACGGAGCTGAACCCTCACCTCATGTGTGCCCT...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | ACACAGACTGCATTTGTGAAAGGCACTGACTGTCTCAGCAACTCTGAACATTCAACTTTGCCAGGTGCATaGCGGTCATGGCTGCTGGGC | + |
Preference number: 4 (lower is better) Translates to: TQTAFVKGTDCLSNSEHSTLPGA*RSWLLG Trigger: GCCCAGCAGCCATGACCGTCATGCACCTGGCAAAGT...TGAATGTTCAGAGTTGCTGAGACAGTCAGTGCCTTTCACAAATGCAGTCTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAATGGGAGCCTTGTCGCTaGCTGACTCACACTCTGATG | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKWEPCR*LTHTLM Trigger: CATCAGAGTGTGAGTCAGTCAGCGACAAGGCTCCCA...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAATGGGAGCCTTGTCGCTaGCTGACTCACACTCTGATG | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVEWEPCR*LTHTLM Trigger: CATCAGAGTGTGAGTCAGTCAGCGACAAGGCTCCCA...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGGTCCCAGCGGCAGTTaGAGGTGGAGTGGGGGAAGT | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKGPSGS*RWSGGS Trigger: ACTTCCCCCACTCCACCTTCAACTGCCGCTGGGACC...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAACTCTGTCAGGGGGTATaGTGCATAGAAGTCCCGTCG | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVELCQGV*CIEVPS Trigger: CGACGGGACTTCTATGCAGCATACCCCCTGACAGAG...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAACTCTGTCAGGGGGTATaGTGCATAGAAGTCCCGTCG | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKLCQGV*CIEVPS Trigger: CGACGGGACTTCTATGCAGCATACCCCCTGACAGAG...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | ACACACACACACGAGTTTCCTGTGGCATTTAAATTAATCTGGTTGGTCCATAGACGCCTCGGTCCTCGTTaGAGCCGTTGGGGACCTCTG | + |
Preference number: 4 (lower is better) Translates to: THTHEFPVAFKLIWLVHRRLGPR*SRWGPL Trigger: CAGAGGTCCCCAACGGCTCCAACGAGGACCGAGGCG...TCTATGGACCAACCAGATTAATTTAAATGCCACAGGAAACTCGTGTGTGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGACGGTCATGGCTGCTaGGCACCGCAGGAATCGCAC | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKDGHGC*APQESH Trigger: GTGCGATTCCTGCGGTGCCCAGCAGCCATGACCGTC...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAACGCTTGCAGGCTGGCTaGACACGGTACTTGAGGGGG | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKRLQAG*TRYLRG Trigger: CCCCCTCAAGTACCGTGTCCAGCCAGCCTGCAAGCG...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | ACACACACACACGAGTTTCCTGTGGCATTTAAATTAATCTGGTTGGTCCATAGAAGTAGGATGGGTAGCTaGGGGGCCGTGGGAGCTGGG | + |
Preference number: 4 (lower is better) Translates to: THTHEFPVAFKLIWLVHRSRMGS*GAVGAG Trigger: CCCAGCTCCCACGGCCCCCCAGCTACCCATCCTACT...TCTATGGACCAACCAGATTAATTTAAATGCCACAGGAAACTCGTGTGTGTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAGGGTTTTGTCTGATCTaGTGCTCAGCAGTGGTCGAG | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKGFCLI*CSAVVE Trigger: CTCGACCACTGCTGAGCATCAGATCAGACAAAACCC...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | CCAAGAGATATAAATGACCTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTGGGTTTTGTCTGATCTaGTGCTCAGCAGTGGTCGAG | + |
Preference number: 4 (lower is better) Translates to: PRDINDLGQEGTVTGPQTGFCLI*CSAVVE Trigger: CTCGACCACTGCTGAGCATCAGATCAGACAAAACCC...AGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAGGTCATTTATATCTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAACTTTGCCAGGTGCATaGCGGTCATGGCTGCTGGGC | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKTLPGA*RSWLLG Trigger: GCCCAGCAGCCATGACCGTCATGCACCTGGCAAAGT...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | TTCTTTTATTTTCTTGTGCTTCTAGATGCCTCTGTCCTATCCCTGCCTGGCCTCCTCTGTCAGGGGGTATaGTGCATAGAAGTCCCGTCG | + |
Preference number: 4 (lower is better) Translates to: FFYFLVLLDASVLSLPGLLCQGV*CIEVPS Trigger: CGACGGGACTTCTATGCAGCATACCCCCTGACAGAG...GAGGCCAGGCAGGGATAGGACAGAGGCATCTAGAAGCACAAGAAAATAAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAAGGAACTTTGCCAGGTaGATGACGGTCATGGCTGCT | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKRNFAR*MTVMAA Trigger: AGCAGCCATGACCGTCATGCACCTGGCAAAGTTCCT...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAGGAACTTTGCCAGGTaGATGACGGTCATGGCTGCT | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVERNFAR*MTVMAA Trigger: AGCAGCCATGACCGTCATGCACCTGGCAAAGTTCCT...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAGTTGCGGAGGAACTTTaGCAGGTGCATGACGGTCAT | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKVAEEL*QVHDGH Trigger: ATGACCGTCATGCACCTGGCAAAGTTCCTCCGCAAC...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | CCAAGAGATATAAATGACCTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTGTTGCGGAGGAACTTTaGCAGGTGCATGACGGTCAT | + |
Preference number: 4 (lower is better) Translates to: PRDINDLGQEGTVTGPQTVAEEL*QVHDGH Trigger: ATGACCGTCATGCACCTGGCAAAGTTCCTCCGCAAC...AGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAGGTCATTTATATCTCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | GATATAAATGACCTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACCCTGGACGTCACACATaGGGCAGTATTTGTTGGTCT | + |
Preference number: 4 (lower is better) Translates to: DINDLGQEGTVTGPQTQDPGRHT*GSICWS Trigger: AGACCAACAAATACTGCCCCATGTGTGACGTCCAGG...GTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAGGTCATTTATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAACGAGTTTTATGGACCTaGACGTCACACATGGGGCAG | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVERVLWT*TSHMGQ Trigger: CTGCCCCATGTGTGACGTCCAGGTCCATAAAACTCG...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGAGCCGCTTGCAGGCTaGCTGGACACGGTACTTGAG | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKEPLAG*LDTVLE Trigger: CTCAAGTACCGTGTCCAGCCAGCCTGCAAGCGGCTC...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAATGCCCCGCTGGTGTTaGTGCCTTCTGAGGGGGTTG | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKMPRWC*CLLRGL Trigger: CAACCCCCTCAGAAGGCACCAACACCAGCGGGGCAT...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAATCTTGCGCCCCCTGCTaGTGGAGGATGGCGTTTGCA | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKSCAPC*WRMAFA Trigger: TGCAAACGCCATCCTCCACCAGCAGGGGGCGCAAGA...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAACCTGGACGTCACACATaGGGCAGTATTTGTTGGTCT | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKPGRHT*GSICWS Trigger: AGACCAACAAATACTGCCCCATGTGTGACGTCCAGG...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAACTCTGATGCCCCGCTaGTGTTGGTGCCTTCTGAGG | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKTLMPR*CWCLLR Trigger: CCTCAGAAGGCACCAACACCAGCGGGGCATCAGAGT...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAACCTGCTGGTGGAGGATaGCGTTTGCAGGCAGTTCGA | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKPAGGG*RLQAVR Trigger: TCGAACTGCCTGCAAACGCCATCCTCCACCAGCAGG...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAAGGGCACACATGAGGTaGGGGTTCAGCTCCGTGATT | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKRAHMR*GFSSVI Trigger: AATCACGGAGCTGAACCCTCACCTCATGTGTGCCCT...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAATGGGAGCCTTGTCGCTaGCTGACTCACACTCTGATG | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKWEPCR*LTHTLM Trigger: CATCAGAGTGTGAGTCAGTCAGCGACAAGGCTCCCA...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAATGGGGCAGTATTTGTTaGTCTCCAAGTAGCGTACGA | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKWGSIC*SPSSVR Trigger: TCGTACGCTACTTGGAGACCAACAAATACTGCCCCA...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | ACACAGACTGCATTTGTGAAAGGCACTGACTGTCTCAGCAACTCTGAACATTCACGAGTTTTATGGACCTaGACGTCACACATGGGGCAG | + |
Preference number: 4 (lower is better) Translates to: TQTAFVKGTDCLSNSEHSRVLWT*TSHMGQ Trigger: CTGCCCCATGTGTGACGTCCAGGTCCATAAAACTCG...TGAATGTTCAGAGTTGCTGAGACAGTCAGTGCCTTTCACAAATGCAGTCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAGTGGTCGAGTTTTATaGACCTGGACGTCACACATG | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVESGRVL*TWTSHM Trigger: CATGTGTGACGTCCAGGTCCATAAAACTCGACCACT...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAAGTGGTCGAGTTTTATaGACCTGGACGTCACACATG | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKSGRVL*TWTSHM Trigger: CATGTGTGACGTCCAGGTCCATAAAACTCGACCACT...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAATCTGATGCTCAGCAGTaGTCGAGTTTTATGGACCTG | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKSDAQQ*SSFMDL Trigger: CAGGTCCATAAAACTCGACCACTGCTGAGCATCAGA...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAATCTGATGCTCAGCAGTaGTCGAGTTTTATGGACCTG | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVESDAQQ*SSFMDL Trigger: CAGGTCCATAAAACTCGACCACTGCTGAGCATCAGA...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAACCACCTTGTACTTGCTaGGCACATCCATTTTGTTGC | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKPPCTC*AHPFCC Trigger: GCAACAAAATGGATGTGCCCAGCAAGTACAAGGTGG...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAACCACCTTGTACTTGCTaGGCACATCCATTTTGTTGC | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVEPPCTC*AHPFCC Trigger: GCAACAAAATGGATGTGCCCAGCAAGTACAAGGTGG...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | ACACACACACACGAGTTTCCTGTGGCATTTAAATTAATCTGGTTGGTCCATAGAAGGGCACACATGAGGTaGGGGTTCAGCTCCGTGATT | + |
Preference number: 4 (lower is better) Translates to: THTHEFPVAFKLIWLVHRRAHMR*GFSSVI Trigger: AATCACGGAGCTGAACCCTCACCTCATGTGTGCCCT...TCTATGGACCAACCAGATTAATTTAAATGCCACAGGAAACTCGTGTGTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGGGTTTTGTCTGATCTaGTGCTCAGCAGTGGTCGAG | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKGFCLI*CSAVVE Trigger: CTCGACCACTGCTGAGCATCAGATCAGACAAAACCC...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR TCA 90 bp | ACACACACACACGAGTTTCCTGTGGCATTTAAATTAATCTGGTTGGTCCATAGATGGGAGCCTTGTCGCTaGCTGACTCACACTCTGATG | + |
Preference number: 4 (lower is better) Translates to: THTHEFPVAFKLIWLVHRWEPCR*LTHTLM Trigger: CATCAGAGTGTGAGTCAGTCAGCGACAAGGCTCCCA...TCTATGGACCAACCAGATTAATTTAAATGCCACAGGAAACTCGTGTGTGTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAACCAAGTAGCGTACGATaGAGGTTTTGCAGAAGGAAT | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKPSSVR*RFCRRN Trigger: ATTCCTTCTGCAAAACCTGCATCGTACGCTACTTGG...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAATCTCCACCTTGTACTTaGTGGGCACATCCATTTTGT | + |
Preference number: 4 (lower is better) Translates to: KPTSHSENGRNQGKSKVESPPCT*WAHPFC Trigger: ACAAAATGGATGTGCCCAGCAAGTACAAGGTGGAGA...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAATCTCCACCTTGTACTTaGTGGGCACATCCATTTTGT | + |
Preference number: 4 (lower is better) Translates to: NPPPTLKMGGTRESQKWKSPPCT*WAHPFC Trigger: ACAAAATGGATGTGCCCAGCAAGTACAAGGTGGAGA...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAACGAGTTTTATGGACCTaGACGTCACACATGGGGCAG | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKRVLWT*TSHMGQ Trigger: CTGCCCCATGTGTGACGTCCAGGTCCATAAAACTCG...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTCTTTTATTTTCTTGTGCTTCTAGATGCCTCTGTCCTATCCCTGCCTGGCCTCTCTGATGCTCAGCAGTaGTCGAGTTTTATGGACCTG | + |
Preference number: 4 (lower is better) Translates to: FFYFLVLLDASVLSLPGLSDAQQ*SSFMDL Trigger: CAGGTCCATAAAACTCGACCACTGCTGAGCATCAGA...GAGGCCAGGCAGGGATAGGACAGAGGCATCTAGAAGCACAAGAAAATAAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | ACACACACACACGAGTTTCCTGTGGCATTTAAATTAATCTGGTTGGTCCATAGAGTTGCGGAGGAACTTTaGCAGGTGCATGACGGTCAT | + |
Preference number: 4 (lower is better) Translates to: THTHEFPVAFKLIWLVHRVAEEL*QVHDGH Trigger: ATGACCGTCATGCACCTGGCAAAGTTCCTCCGCAAC...TCTATGGACCAACCAGATTAATTTAAATGCCACAGGAAACTCGTGTGTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | ACACAGACTGCATTTGTGAAAGGCACTGACTGTCTCAGCAACTCTGAACATTCATCTGATGCTCAGCAGTaGTCGAGTTTTATGGACCTG | + |
Preference number: 4 (lower is better) Translates to: TQTAFVKGTDCLSNSEHSSDAQQ*SSFMDL Trigger: CAGGTCCATAAAACTCGACCACTGCTGAGCATCAGA...TGAATGTTCAGAGTTGCTGAGACAGTCAGTGCCTTTCACAAATGCAGTCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAACCACCTTGTACTTGCTaGGCACATCCATTTTGTTGC | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKPPCTC*AHPFCC Trigger: GCAACAAAATGGATGTGCCCAGCAAGTACAAGGTGG...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAACCAAGTAGCGTACGATaGAGGTTTTGCAGAAGGAAT | + |
Preference number: 4 (lower is better) Translates to: FIKPTSHSENGRNQGKSKPSSVR*RFCRRN Trigger: ATTCCTTCTGCAAAACCTGCATCGTACGCTACTTGG...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | ACACACACACACGAGTTTCCTGTGGCATTTAAATTAATCTGGTTGGTCCATAGACCAAGTAGCGTACGATaGAGGTTTTGCAGAAGGAAT | + |
Preference number: 4 (lower is better) Translates to: THTHEFPVAFKLIWLVHRPSSVR*RFCRRN Trigger: ATTCCTTCTGCAAAACCTGCATCGTACGCTACTTGG...TCTATGGACCAACCAGATTAATTTAAATGCCACAGGAAACTCGTGTGTGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR GCA 90 bp | ACACACACACACGAGTTTCCTGTGGCATTTAAATTAATCTGGTTGGTCCATAGATCTCCACCTTGTACTTaGTGGGCACATCCATTTTGT | + |
Preference number: 4 (lower is better) Translates to: THTHEFPVAFKLIWLVHRSPPCT*WAHPFC Trigger: ACAAAATGGATGTGCCCAGCAAGTACAAGGTGGAGA...TCTATGGACCAACCAGATTAATTTAAATGCCACAGGAAACTCGTGTGTGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CCA 90 bp | GAGGGGGTTGGCACCGTGGGCAGGGTGAGCCGCTTGCAGGCTGGCTaGACACGGTACTTGAGGGGGAGAGGCCCATTCCTTCGCCAGGGG | + |
Preference number: 5 (lower is better) Translates to: EGVGTVGRVSRLQAG*TRYLRGRGPFLRQG Trigger: CCCCTGGCGAAGGAATGGGCCTCTCCCCCTCAAGTACCGTGTCCAGCCAGCCTGCAAGCGGCTCACCCTGCCCACGGTGCCAACCCCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | CTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACGTGGTGCAAACAGGCAGGGTGAGCCGCTaGCAGGCTGGCTGGACACGG | + |
Preference number: 5 (lower is better) Translates to: LGQEGTVTGPQTQDVVQTGRVSR*QAGWTR Trigger: CCGTGTCCAGCCAGCCTGCAAGCGGCTCACCCTGCC...TGTTTGCACCACGTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | TTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTAGGCCCCGGCTGGACACGGTACTaGAGGGGGAGAGGCCCATTC | + |
Preference number: 5 (lower is better) Translates to: FGRTGVCACLGPPSTLGPGWTRY*RGRGPF Trigger: GAATGGGCCTCTCCCCCTCAAGTACCGTGTCCAGCC...GGGGCCTAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | TTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTAGGCAGGGTGAGCCGCTaGCAGGCTGGCTGGACACGG | + |
Preference number: 5 (lower is better) Translates to: LAFGRTGVCACLGPPSTLGRVSR*QAGWTR Trigger: CCGTGTCCAGCCAGCCTGCAAGCGGCTCACCCTGCC...TAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | TTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTAGGCCCCGATGCCCCGCTGGTGTaGGTGCCTTCTGAGGGGGTT | + |
Preference number: 5 (lower is better) Translates to: FGRTGVCACLGPPSTLGPDAPLV*VPSEGV Trigger: AACCCCCTCAGAAGGCACCAACACCAGCGGGGCATC...GGGGCCTAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS GCA 90 bp | CCATTAACAGTCATCTTGCGCCCCCTGCTGGTGGAGGATGGCGTTTaGAGGCAGTTCGAAGTGCCCCCATTGGTAGCTGTGGTGGTCCCA | + |
Preference number: 5 (lower is better) Translates to: PLTVILRPLLVEDGV*RQFEVPPLVAVVVP Trigger: TGGGACCACCACAGCTACCAATGGGGGCACTTCGAACTGCCTGCAAACGCCATCCTCCACCAGCAGGGGGCGCAAGATGACTGTTAATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CCA 90 bp | AGGAGCGCCATTAACAGTCATCTTGCGCCCCCTGCTGGTGGAGGATaGCGTTTGCAGGCAGTTCGAAGTGCCCCCATTGGTAGCTGTGGT | + |
Preference number: 5 (lower is better) Translates to: RSAINSHLAPPAGGG*RLQAVRSAPIGSCG Trigger: ACCACAGCTACCAATGGGGGCACTTCGAACTGCCTGCAAACGCCATCCTCCACCAGCAGGGGGCGCAAGATGACTGTTAATGGCGCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | CTAGGACAGGAGGGTACAGTCACAGGACCTCAGACTCAGGACGTGGTGCAAACAGATGCCCCGCTGGTGTaGGTGCCTTCTGAGGGGGTT | + |
Preference number: 5 (lower is better) Translates to: LGQEGTVTGPQTQDVVQTDAPLV*VPSEGV Trigger: AACCCCCTCAGAAGGCACCAACACCAGCGGGGCATC...TGTTTGCACCACGTCCTGAGTCTGAGGTCCTGTGACTGTACCCTCCTGTCCTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | AGGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTTCGAAGTGCCCCCATaGGTAGCTGTGGTGGTCCCA | + |
Preference number: 5 (lower is better) Translates to: RAVGFWQNWSLCLSGATLFEVPP*VAVVVP Trigger: TGGGACCACCACAGCTACCAATGGGGGCACTTCGAA...GAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | TTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTAGGCCCCCCATTAACAGTCATCTaGCGCCCCCTGCTGGTGGAG | + |
Preference number: 5 (lower is better) Translates to: FGRTGVCACLGPPSTLGPPLTVI*RPLLVE Trigger: CTCCACCAGCAGGGGGCGCAAGATGACTGTTAATGG...GGGGCCTAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS GCA 90 bp | CATTTTGTTGCGGAGGAACTTTGCCAGGTGCATGACGGTCATGGCTaGTGGGCACCGCAGGAATCGCACTCCTGTCTTCTCCTTGTCCCC | + |
Preference number: 5 (lower is better) Translates to: HFVAEELCQVHDGHG*WAPQESHSCLLLVP Trigger: GGGGACAAGGAGAAGACAGGAGTGCGATTCCTGCGGTGCCCAGCAGCCATGACCGTCATGCACCTGGCAAAGTTCCTCCGCAACAAAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CCA 90 bp | TTTGTTGCGGAGGAACTTTGCCAGGTGCATGACGGTCATGGCTGCTaGGCACCGCAGGAATCGCACTCCTGTCTTCTCCTTGTCCCCATC | + |
Preference number: 5 (lower is better) Translates to: FVAEELCQVHDGHGC*APQESHSCLLLVPI Trigger: GATGGGGACAAGGAGAAGACAGGAGTGCGATTCCTGCGGTGCCCAGCAGCCATGACCGTCATGCACCTGGCAAAGTTCCTCCGCAACAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CAA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAGGCAGGGTGAGCCGCTaGCAGGCTGGCTGGACACGG | + |
Preference number: 5 (lower is better) Translates to: KPTSHSENGRNQGKSKVEGRVSR*QAGWTR Trigger: CCGTGTCCAGCCAGCCTGCAAGCGGCTCACCCTGCC...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CAA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAGGCAGGGTGAGCCGCTaGCAGGCTGGCTGGACACGG | + |
Preference number: 5 (lower is better) Translates to: NPPPTLKMGGTRESQKWKGRVSR*QAGWTR Trigger: CCGTGTCCAGCCAGCCTGCAAGCGGCTCACCCTGCC...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CAA 90 bp | GAGGCAGTGGACTGGAGGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTTCGAAGTGCCCCCATaGGTAGCTGTGGTGGTCCCA | + |
Preference number: 5 (lower is better) Translates to: EAVDWRAVGFWQNWSLCLFEVPP*VAVVVP Trigger: TGGGACCACCACAGCTACCAATGGGGGCACTTCGAA...CAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCCTCCAGTCCACTGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CAA 90 bp | GGGCTGTTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTCTGGGCACATCCATTTaGTTGCGGAGGAACTTTGCC | + |
Preference number: 5 (lower is better) Translates to: GLLAFGRTGVCACLGPPSLGTSI*LRRNFA Trigger: GGCAAAGTTCCTCCGCAACAAAATGGATGTGCCCAG...AGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAACAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CAA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAATCGCCTCGGTCCTCGTaGGAGCCGTTGGGGACCTCT | + |
Preference number: 5 (lower is better) Translates to: NPPPTLKMGGTRESQKWKSPRSS*EPLGTS Trigger: AGAGGTCCCCAACGGCTCCAACGAGGACCGAGGCGA...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CAA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAATCGCCTCGGTCCTCGTaGGAGCCGTTGGGGACCTCT | + |
Preference number: 5 (lower is better) Translates to: KPTSHSENGRNQGKSKVESPRSS*EPLGTS Trigger: AGAGGTCCCCAACGGCTCCAACGAGGACCGAGGCGA...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CAA 90 bp | TTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTAGGCCCCATCTCCACCTTGTACTaGCTGGGCACATCCATTTTG | + |
Preference number: 5 (lower is better) Translates to: FGRTGVCACLGPPSTLGPISTLY*LGTSIL Trigger: CAAAATGGATGTGCCCAGCAAGTACAAGGTGGAGAT...GGGGCCTAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CAA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAGGCTGGACACGGTACTaGAGGGGGAGAGGCCCATTC | + |
Preference number: 5 (lower is better) Translates to: NPPPTLKMGGTRESQKWKGWTRY*RGRGPF Trigger: GAATGGGCCTCTCCCCCTCAAGTACCGTGTCCAGCC...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CAA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGGCAGGGTGAGCCGCTaGCAGGCTGGCTGGACACGG | + |
Preference number: 5 (lower is better) Translates to: FIKPTSHSENGRNQGKSKGRVSR*QAGWTR Trigger: CCGTGTCCAGCCAGCCTGCAAGCGGCTCACCCTGCC...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CAA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAGATGCCCCGCTGGTGTaGGTGCCTTCTGAGGGGGTT | + |
Preference number: 5 (lower is better) Translates to: NPPPTLKMGGTRESQKWKDAPLV*VPSEGV Trigger: AACCCCCTCAGAAGGCACCAACACCAGCGGGGCATC...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
||
CDS-3UTR CAA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAGCAGGGCTGGGAGCCTaGTCGCTGACTGACTCACAC | + |
Preference number: 5 (lower is better) Translates to: NPPPTLKMGGTRESQKWKAGLGA*SLTDSH Trigger: GTGTGAGTCAGTCAGCGACAAGGCTCCCAGCCCTGC...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAGCAGGGCTGGGAGCCTaGTCGCTGACTGACTCACAC | + |
Preference number: 5 (lower is better) Translates to: KPTSHSENGRNQGKSKVEAGLGA*SLTDSH Trigger: GTGTGAGTCAGTCAGCGACAAGGCTCCCAGCCCTGC...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | ACACAGACTGCATTTGTGAAAGGCACTGACTGTCTCAGCAACTCTGAACATTCATCGCCTCGGTCCTCGTaGGAGCCGTTGGGGACCTCT | + |
Preference number: 5 (lower is better) Translates to: TQTAFVKGTDCLSNSEHSSPRSS*EPLGTS Trigger: AGAGGTCCCCAACGGCTCCAACGAGGACCGAGGCGA...TGAATGTTCAGAGTTGCTGAGACAGTCAGTGCCTTTCACAAATGCAGTCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAGGTGGAGGATGGCGTTaGCAGGCAGTTCGAAGTGCC | + |
Preference number: 5 (lower is better) Translates to: KPTSHSENGRNQGKSKVEGGGWR*QAVRSA Trigger: GGCACTTCGAACTGCCTGCAAACGCCATCCTCCACC...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAGGTGGAGGATGGCGTTaGCAGGCAGTTCGAAGTGCC | + |
Preference number: 5 (lower is better) Translates to: NPPPTLKMGGTRESQKWKGGGWR*QAVRSA Trigger: GGCACTTCGAACTGCCTGCAAACGCCATCCTCCACC...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAATCGCCTCGGTCCTCGTaGGAGCCGTTGGGGACCTCT | + |
Preference number: 5 (lower is better) Translates to: FIKPTSHSENGRNQGKSKSPRSS*EPLGTS Trigger: AGAGGTCCCCAACGGCTCCAACGAGGACCGAGGCGA...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAATTCGAAGTGCCCCCATaGGTAGCTGTGGTGGTCCCA | + |
Preference number: 5 (lower is better) Translates to: NPPPTLKMGGTRESQKWKFEVPP*VAVVVP Trigger: TGGGACCACCACAGCTACCAATGGGGGCACTTCGAA...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAATTCGAAGTGCCCCCATaGGTAGCTGTGGTGGTCCCA | + |
Preference number: 5 (lower is better) Translates to: KPTSHSENGRNQGKSKVEFEVPP*VAVVVP Trigger: TGGGACCACCACAGCTACCAATGGGGGCACTTCGAA...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAACCATTAACAGTCATCTaGCGCCCCCTGCTGGTGGAG | + |
Preference number: 5 (lower is better) Translates to: NPPPTLKMGGTRESQKWKPLTVI*RPLLVE Trigger: CTCCACCAGCAGGGGGCGCAAGATGACTGTTAATGG...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | TTGGCTTTTGGCAGAACTGGAGTCTGTGCTTGTCTGGGGCCACCCTCTACTCTAATCTCCACCTTGTACTaGCTGGGCACATCCATTTTG | + |
Preference number: 5 (lower is better) Translates to: LAFGRTGVCACLGPPSTLISTLY*LGTSIL Trigger: CAAAATGGATGTGCCCAGCAAGTACAAGGTGGAGAT...TAGAGTAGAGGGTGGCCCCAGACAAGCACAGACTCCAGTTCTGCCAAAAGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGGCTGGACACGGTACTaGAGGGGGAGAGGCCCATTC | + |
Preference number: 5 (lower is better) Translates to: FIKPTSHSENGRNQGKSKGWTRY*RGRGPF Trigger: GAATGGGCCTCTCCCCCTCAAGTACCGTGTCCAGCC...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGATGCCCCGCTGGTGTaGGTGCCTTCTGAGGGGGTT | + |
Preference number: 5 (lower is better) Translates to: FIKPTSHSENGRNQGKSKDAPLV*VPSEGV Trigger: AACCCCCTCAGAAGGCACCAACACCAGCGGGGCATC...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGCAGGGCTGGGAGCCTaGTCGCTGACTGACTCACAC | + |
Preference number: 5 (lower is better) Translates to: FIKPTSHSENGRNQGKSKAGLGA*SLTDSH Trigger: GTGTGAGTCAGTCAGCGACAAGGCTCCCAGCCCTGC...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS GCA 90 bp | ATTCCTTCAGGGGCTCATCTTCATAGAGGATCTCCACCTTGTACTTaGTGGGCACATCCATTTTGTTGCGGAGGAACTTTGCCAGGTGCA | + |
Preference number: 5 (lower is better) Translates to: IPSGAHLHRGSPPCT*WAHPFCCGGTLPGA Trigger: TGCACCTGGCAAAGTTCCTCCGCAACAAAATGGATGTGCCCAGCAAGTACAAGGTGGAGATCCTCTATGAAGATGAGCCCCTGAAGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAGGCACATCCATTTTGTaGCGGAGGAACTTTGCCAGG | + |
Preference number: 5 (lower is better) Translates to: KPTSHSENGRNQGKSKVEGTSIL*RRNFAR Trigger: CCTGGCAAAGTTCCTCCGCAACAAAATGGATGTGCC...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAACTGGGCACATCCATTTaGTTGCGGAGGAACTTTGCC | + |
Preference number: 5 (lower is better) Translates to: KPTSHSENGRNQGKSKVELGTSI*LRRNFA Trigger: GGCAAAGTTCCTCCGCAACAAAATGGATGTGCCCAG...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAACTGGGCACATCCATTTaGTTGCGGAGGAACTTTGCC | + |
Preference number: 5 (lower is better) Translates to: NPPPTLKMGGTRESQKWKLGTSI*LRRNFA Trigger: GGCAAAGTTCCTCCGCAACAAAATGGATGTGCCCAG...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | ACACAGACTGCATTTGTGAAAGGCACTGACTGTCTCAGCAACTCTGAACATTCACCATTAACAGTCATCTaGCGCCCCCTGCTGGTGGAG | + |
Preference number: 5 (lower is better) Translates to: TQTAFVKGTDCLSNSEHSPLTVI*RPLLVE Trigger: CTCCACCAGCAGGGGGCGCAAGATGACTGTTAATGG...TGAATGTTCAGAGTTGCTGAGACAGTCAGTGCCTTTCACAAATGCAGTCTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS GCA 90 bp | CGTCACACATGGGGCAGTATTTGTTGGTCTCCAAGTAGCGTACGATaGAGGTTTTGCAGAAGGAATGTAAGCATTCCACAATGGTGGTGG | + |
Preference number: 5 (lower is better) Translates to: RHTWGSICWSPSSVR*RFCRRNVSIPQWWW Trigger: CCACCACCATTGTGGAATGCTTACATTCCTTCTGCAAAACCTGCATCGTACGCTACTTGGAGACCAACAAATACTGCCCCATGTGTGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | TTTATAAAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAACCATTAACAGTCATCTaGCGCCCCCTGCTGGTGGAG | + |
Preference number: 5 (lower is better) Translates to: FIKPTSHSENGRNQGKSKPLTVI*RPLLVE Trigger: CTCCACCAGCAGGGGGCGCAAGATGACTGTTAATGG...TTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTTTATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | AAACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAATCTCCACCTTGTACTaGCTGGGCACATCCATTTTG | + |
Preference number: 5 (lower is better) Translates to: KPTSHSENGRNQGKSKVEISTLY*LGTSIL Trigger: CAAAATGGATGTGCCCAGCAAGTACAAGGTGGAGAT...TTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS-3UTR CAA 90 bp | AACCCACCTCCCACTCTGAAAATGGGAGGAACCAGGGAAAGTCAAAAGTGGAAAATCTCCACCTTGTACTaGCTGGGCACATCCATTTTG | + |
Preference number: 5 (lower is better) Translates to: NPPPTLKMGGTRESQKWKISTLY*LGTSIL Trigger: CAAAATGGATGTGCCCAGCAAGTACAAGGTGGAGAT...TTTCCACTTTTGACTTTCCCTGGTTCCTCCCATTTTCAGAGTGGGAGGTGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CCA 72 bp | GGCACCGTGGGCAGGGTGAGCCGCTTGCAGGCTGGCTaGACACGGTACTTGAGGGGGAGAGGCCCATTCCTT | + |
Preference number: 6 (lower is better) Translates to: GTVGRVSRLQAG*TRYLRGRGPFL Trigger: AAGGAATGGGCCTCTCCCCCTCAAGTACCGTGTCCAGCCAGCCTGCAAGCGGCTCACCCTGCCCACGGTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CCA 72 bp | GGTTGGCACCGTGGGCAGGGTGAGCCGCTTGCAGGCTaGCTGGACACGGTACTTGAGGGGGAGAGGCCCATT | + |
Preference number: 6 (lower is better) Translates to: GWHRGQGEPLAG*LDTVLEGERPI Trigger: AATGGGCCTCTCCCCCTCAAGTACCGTGTCCAGCCAGCCTGCAAGCGGCTCACCCTGCCCACGGTGCCAACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CAA 72 bp | TCTGAGGGGGTTGGCACCGTGGGCAGGGTGAGCCGCTaGCAGGCTGGCTGGACACGGTACTTGAGGGGGAGA | + |
Preference number: 6 (lower is better) Translates to: SEGVGTVGRVSR*QAGWTRYLRGR Trigger: TCTCCCCCTCAAGTACCGTGTCCAGCCAGCCTGCAAGCGGCTCACCCTGCCCACGGTGCCAACCCCCTCAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CCA 72 bp | CCTTCTCCTGTTCCAGGACCTCGCCTCGGTCCTCGTTaGAGCCGTTGGGGACCTCTGTCAGGGGGTATGCTG | + |
Preference number: 6 (lower is better) Translates to: PSPVPGPRLGPR*SRWGPLSGGML Trigger: CAGCATACCCCCTGACAGAGGTCCCCAACGGCTCCAACGAGGACCGAGGCGAGGTCCTGGAACAGGAGAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CAA 72 bp | CCCTTCTCCTGTTCCAGGACCTCGCCTCGGTCCTCGTaGGAGCCGTTGGGGACCTCTGTCAGGGGGTATGCT | + |
Preference number: 6 (lower is better) Translates to: PFSCSRTSPRSS*EPLGTSVRGYA Trigger: AGCATACCCCCTGACAGAGGTCCCCAACGGCTCCAACGAGGACCGAGGCGAGGTCCTGGAACAGGAGAAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CAA 90 bp | CTGCTGGTGGAGGATGGCGTTTGCAGGCAGTTCGAAGTGCCCCCATaGGTAGCTGTGGTGGTCCCAGCGGCAGTTGAAGGTGGAGTGGGG | + |
Preference number: 6 (lower is better) Translates to: LLVEDGVCRQFEVPP*VAVVVPAAVEGGVG Trigger: CCCCACTCCACCTTCAACTGCCGCTGGGACCACCACAGCTACCAATGGGGGCACTTCGAACTGCCTGCAAACGCCATCCTCCACCAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS GCA 72 bp | GCGGAGGAACTTTGCCAGGTGCATGACGGTCATGGCTaGTGGGCACCGCAGGAATCGCACTCCTGTCTTCTC | + |
Preference number: 6 (lower is better) Translates to: AEELCQVHDGHG*WAPQESHSCLL Trigger: GAGAAGACAGGAGTGCGATTCCTGCGGTGCCCAGCAGCCATGACCGTCATGCACCTGGCAAAGTTCCTCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CAA 90 bp | GCCATTAACAGTCATCTTGCGCCCCCTGCTGGTGGAGGATGGCGTTaGCAGGCAGTTCGAAGTGCCCCCATTGGTAGCTGTGGTGGTCCC | + |
Preference number: 6 (lower is better) Translates to: AINSHLAPPAGGGWR*QAVRSAPIGSCGGP Trigger: GGGACCACCACAGCTACCAATGGGGGCACTTCGAACTGCCTGCAAACGCCATCCTCCACCAGCAGGGGGCGCAAGATGACTGTTAATGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CAA 72 bp | GAGGATGGCGTTTGCAGGCAGTTCGAAGTGCCCCCATaGGTAGCTGTGGTGGTCCCAGCGGCAGTTGAAGGT | + |
Preference number: 6 (lower is better) Translates to: EDGVCRQFEVPP*VAVVVPAAVEG Trigger: ACCTTCAACTGCCGCTGGGACCACCACAGCTACCAATGGGGGCACTTCGAACTGCCTGCAAACGCCATCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CAA 72 bp | AGTCATCTTGCGCCCCCTGCTGGTGGAGGATGGCGTTaGCAGGCAGTTCGAAGTGCCCCCATTGGTAGCTGT | + |
Preference number: 6 (lower is better) Translates to: SHLAPPAGGGWR*QAVRSAPIGSC Trigger: ACAGCTACCAATGGGGGCACTTCGAACTGCCTGCAAACGCCATCCTCCACCAGCAGGGGGCGCAAGATGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CCA 72 bp | GAGGAACTTTGCCAGGTGCATGACGGTCATGGCTGCTaGGCACCGCAGGAATCGCACTCCTGTCTTCTCCTT | + |
Preference number: 6 (lower is better) Translates to: EELCQVHDGHGC*APQESHSCLLL Trigger: AAGGAGAAGACAGGAGTGCGATTCCTGCGGTGCCCAGCAGCCATGACCGTCATGCACCTGGCAAAGTTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS GCA 72 bp | CTCGTTGGAGCCGTTGGGGACCTCTGTCAGGGGGTATaGTGCATAGAAGTCCCGTCGCCGTTTCATTTCATC | + |
Preference number: 6 (lower is better) Translates to: LVGAVGDLCQGV*CIEVPSPFHFI Trigger: GATGAAATGAAACGGCGACGGGACTTCTATGCAGCATACCCCCTGACAGAGGTCCCCAACGGCTCCAACGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CCA 72 bp | ATTAACAGTCATCTTGCGCCCCCTGCTGGTGGAGGATaGCGTTTGCAGGCAGTTCGAAGTGCCCCCATTGGT | + |
Preference number: 6 (lower is better) Translates to: INSHLAPPAGGG*RLQAVRSAPIG Trigger: ACCAATGGGGGCACTTCGAACTGCCTGCAAACGCCATCCTCCACCAGCAGGGGGCGCAAGATGACTGTTAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000103149.9 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS GCA 72 bp | GTTGGAGCCGTTGGGGACCTCTGTCAGGGGGTATGCTaGATAGAAGTCCCGTCGCCGTTTCATTTCATCTTT | + |
Preference number: 6 (lower is better) Translates to: VGAVGDLCQGVC*IEVPSPFHFIF Trigger: AAAGATGAAATGAAACGGCGACGGGACTTCTATGCAGCATACCCCCTGACAGAGGTCCCCAACGGCTCCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CAA 72 bp | AGGATCTCCACCTTGTACTTGCTGGGCACATCCATTTaGTTGCGGAGGAACTTTGCCAGGTGCATGACGGTC | + |
Preference number: 6 (lower is better) Translates to: RISTLYLLGTSI*LRRNFARCMTV Trigger: GACCGTCATGCACCTGGCAAAGTTCCTCCGCAACAAAATGGATGTGCCCAGCAAGTACAAGGTGGAGATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CCA 72 bp | GCAGTGGTCGAGTTTTATGGACCTGGACGTCACACATaGGGCAGTATTTGTTGGTCTCCAAGTAGCGTACGA | + |
Preference number: 6 (lower is better) Translates to: AVVEFYGPGRHT*GSICWSPSSVR Trigger: TCGTACGCTACTTGGAGACCAACAAATACTGCCCCATGTGTGACGTCCAGGTCCATAAAACTCGACCACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CCA 72 bp | GATCTGATGCTCAGCAGTGGTCGAGTTTTATGGACCTaGACGTCACACATGGGGCAGTATTTGTTGGTCTCC | + |
Preference number: 6 (lower is better) Translates to: DLMLSSGRVLWT*TSHMGQYLLVS Trigger: GGAGACCAACAAATACTGCCCCATGTGTGACGTCCAGGTCCATAAAACTCGACCACTGCTGAGCATCAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CAA 72 bp | ATCTCCACCTTGTACTTGCTGGGCACATCCATTTTGTaGCGGAGGAACTTTGCCAGGTGCATGACGGTCATG | + |
Preference number: 6 (lower is better) Translates to: ISTLYLLGTSIL*RRNFARCMTVM Trigger: CATGACCGTCATGCACCTGGCAAAGTTCCTCCGCAACAAAATGGATGTGCCCAGCAAGTACAAGGTGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS GCA 72 bp | GGGGCTCATCTTCATAGAGGATCTCCACCTTGTACTTaGTGGGCACATCCATTTTGTTGCGGAGGAACTTTG | + |
Preference number: 6 (lower is better) Translates to: GAHLHRGSPPCT*WAHPFCCGGTL Trigger: CAAAGTTCCTCCGCAACAAAATGGATGTGCCCAGCAAGTACAAGGTGGAGATCCTCTATGAAGATGAGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CCA 72 bp | TATGGACCTGGACGTCACACATGGGGCAGTATTTGTTaGTCTCCAAGTAGCGTACGATGCAGGTTTTGCAGA | + |
Preference number: 6 (lower is better) Translates to: YGPGRHTWGSIC*SPSSVRCRFCR Trigger: TCTGCAAAACCTGCATCGTACGCTACTTGGAGACCAACAAATACTGCCCCATGTGTGACGTCCAGGTCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CCA 72 bp | TTGTCTGATCTGATGCTCAGCAGTGGTCGAGTTTTATaGACCTGGACGTCACACATGGGGCAGTATTTGTTG | + |
Preference number: 6 (lower is better) Translates to: LSDLMLSSGRVL*TWTSHMGQYLL Trigger: CAACAAATACTGCCCCATGTGTGACGTCCAGGTCCATAAAACTCGACCACTGCTGAGCATCAGATCAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS CCA 72 bp | GCTCATCTTCATAGAGGATCTCCACCTTGTACTTGCTaGGCACATCCATTTTGTTGCGGAGGAACTTTGCCA | + |
Preference number: 6 (lower is better) Translates to: AHLHRGSPPCTC*AHPFCCGGTLP Trigger: TGGCAAAGTTCCTCCGCAACAAAATGGATGTGCCCAGCAAGTACAAGGTGGAGATCCTCTATGAAGATGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS GCA 72 bp | ATTTGTTGGTCTCCAAGTAGCGTACGATGCAGGTTTTaGAGAAGGAATGTAAGCATTCCACAATGGTGGTGG | + |
Preference number: 6 (lower is better) Translates to: ICWSPSSVRCRF*RRNVSIPQWWW Trigger: CCACCACCATTGTGGAATGCTTACATTCCTTCTGCAAAACCTGCATCGTACGCTACTTGGAGACCAACAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |
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CDS GCA 72 bp | TGGGGCAGTATTTGTTGGTCTCCAAGTAGCGTACGATaGAGGTTTTGCAGAAGGAATGTAAGCATTCCACAA | + |
Preference number: 6 (lower is better) Translates to: WGSICWSPSSVR*RFCRRNVSIPQ Trigger: TTGTGGAATGCTTACATTCCTTCTGCAAAACCTGCATCGTACGCTACTTGGAGACCAACAAATACTGCCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018681.14 ENSMUST00000103148.8 ENSMUST00000169807.8 ENSMUST00000179765.8 |