Pregenerated sensors for PCED1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037773Ensembl transcript IDs: ENSMUST00000089581.11, ENSMUST00000110277.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTTTGCACAGAGGCCAAGGGCAGCTTCCCCATGCCTTAAGGTCATaGTTTGGGAGACCTGCTCCCCGACACAGGAATGTCACTCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: SLHRGQGQLPHALRS*FGRPAPRHRNVTLS Trigger: GGACAGAGTGACATTCCTGTGTCGGGGAGCAGGTCTCCCAAACCATGACCTTAAGGCATGGGGAAGCTGCCCTTGGCCTCTGTGCAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| 3UTR CAA 90 bp | GAAGATGAACCTGTGCTAGAAATTCTTCACAGATTTCTAAATAGTTaGCACAGAGGCCAAGGGCAGCTTCCCCATGCCTTAAGGTCATGG | + |
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Preference number: 2 (lower is better) Translates to: EDEPVLEILHRFLNS*HRGQGQLPHALRSW Trigger: CCATGACCTTAAGGCATGGGGAAGCTGCCCTTGGCCTCTGTGCAAACTATTTAGAAATCTGTGAAGAATTTCTAGCACAGGTTCATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| 3UTR CAA 90 bp | TCATACATTTGTCTTAGGTACTGTGCCAGTGCCTCTGCAAGTCTCTaGTCTCCCCCAAAGGTTTTATTAACTCACATTGTCTGTCACCAC | + |
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Preference number: 2 (lower is better) Translates to: SYICLRYCASASASL*SPPKVLLTHIVCHH Trigger: GTGGTGACAGACAATGTGAGTTAATAAAACCTTTGGGGGAGACAAGAGACTTGCAGAGGCACTGGCACAGTACCTAAGACAAATGTATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| 3UTR-3UTR CCA 90 bp | GTGAGTTATAGAATTTTCAAGGGCAGAATTCAAGAAACAAGTAGAAAAGGCCAACTTAAGGTCATGGTTTaGGAGACCTGCTCCCCGACA | + |
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Preference number: 2 (lower is better) Translates to: VSYRIFKGRIQETSRKGQLKVMV*ETCSPT Trigger: TGTCGGGGAGCAGGTCTCCCAAACCATGACCTTAAG...TTGGCCTTTTCTACTTGTTTCTTGAATTCTGCCCTTGAAAATTCTATAACTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| 3UTR-3UTR TCA 90 bp | GTGAGTTATAGAATTTTCAAGGGCAGAATTCAAGAAACAAGTAGAAAAGGCCAACTTCCATGCTTTTATTaGTATCAGCAATGGACAAGA | + |
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Preference number: 2 (lower is better) Translates to: VSYRIFKGRIQETSRKGQLPCFY*YQQWTR Trigger: TCTTGTCCATTGCTGATATCAATAAAAGCATGGAAG...TTGGCCTTTTCTACTTGTTTCTTGAATTCTGCCCTTGAAAATTCTATAACTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| 3UTR-3UTR GCA 90 bp | GTGAGTTATAGAATTTTCAAGGGCAGAATTCAAGAAACAAGTAGAAAAGGCCAATGCCCTTCACTAATTTaGCAGGTTATTAACCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: VSYRIFKGRIQETSRKGQCPSLI*QVINQN Trigger: ATTTTGGTTAATAACCTGGCAAATTAGTGAAGGGCA...TTGGCCTTTTCTACTTGTTTCTTGAATTCTGCCCTTGAAAATTCTATAACTCAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| 3UTR CCA 72 bp | AGAGGCCAAGGGCAGCTTCCCCATGCCTTAAGGTCATaGTTTGGGAGACCTGCTCCCCGACACAGGAATGTC | + |
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Preference number: 3 (lower is better) Translates to: RGQGQLPHALRS*FGRPAPRHRNV Trigger: GACATTCCTGTGTCGGGGAGCAGGTCTCCCAAACCATGACCTTAAGGCATGGGGAAGCTGCCCTTGGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| 3UTR-3UTR CAA 90 bp | TTAACTCACATTGTCTGTCACCACTTCCTTAGCACCCGCCTGTTAACCATGCCCAGTCCCAAAGAACTGTaGATAACAAGGGACCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: LTHIVCHHFLSTRLLTMPSPKEL*ITRDPL Trigger: CAGAGGGTCCCTTGTTATCAACAGTTCTTTGGGACT...GGGCATGGTTAACAGGCGGGTGCTAAGGAAGTGGTGACAGACAATGTGAGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| 3UTR TCA 72 bp | ACACAGGAATGTCACTCTGTCCTTCCATGCTTTTATTaGTATCAGCAATGGACAAGAACACCCCGGCCCAAC | + |
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Preference number: 3 (lower is better) Translates to: TQECHSVLPCFY*YQQWTRTPRPN Trigger: GTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAGCATGGAAGGACAGAGTGACATTCCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| 3UTR TCA 72 bp | ATTAAGTATACCCATCTCCAGGTTGCTTATAGAGTGTaGGTTATAGAATTTTCAAGGGCAGAATTCAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: IKYTHLQVAYRV*VIEFSRAEFKK Trigger: TTTCTTGAATTCTGCCCTTGAAAATTCTATAACTCACACTCTATAAGCAACCTGGAGATGGGTATACTTAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| CDS-3UTR CCA 90 bp | ACCCCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCGTGGCTTGCCCCGGTaGACCACTGGGCCCCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TPAQQLGYQTASPGPLVSRGLPR*TTGPRC Trigger: ACACCGGGGCCCAGTGGTCCACCGGGGCAAGCCACG...AGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CCA 90 bp | CCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTACGTGGCTTGCCCCGGTaGACCACTGGGCCCCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: PAQQLGYQTASPGPLVSLRGLPR*TTGPRC Trigger: ACACCGGGGCCCAGTGGTCCACCGGGGCAAGCCACG...TAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CCA 90 bp | GCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTGCCCCGGTGGACCACTaGGCCCCGGTGTTGACCGTG | + |
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Preference number: 4 (lower is better) Translates to: AQQLGYQTASPGPLVSLAAPVDH*APVLTV Trigger: CACGGTCAACACCGGGGCCCAGTGGTCCACCGGGGC...AGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR GCA 90 bp | CCCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTCTGTCGCAGAGACACTaGCAGGGGCTGGAGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PGPTARLPDSLSRATGISLSQRH*QGLELW Trigger: CCAGAGCTCCAGCCCCTGGCAGTGTCTCTGCGACAG...AGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR GCA 90 bp | ACCCCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCGAGAGGTGGCGGTGTaGATGCTGGTCCCAATGGAC | + |
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Preference number: 4 (lower is better) Translates to: TPAQQLGYQTASPGPLVSREVAV*MLVPMD Trigger: GTCCATTGGGACCAGCATGCACACCGCCACCTCTCG...AGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CCA 90 bp | CCCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGTAAGTGCGAGAGGTaGCGGTGTGCATGCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PGPTARLPDSLSRATGISSKCER*RCACWS Trigger: GGACCAGCATGCACACCGCCACCTCTCGCACTTACT...AGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CCA 90 bp | CCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAAGGCAAGTGGAAAGGTaGGAGCAGGGGCAAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PAQQLGYQTASPGPLVSLRQVER*EQGQGQ Trigger: CTGGCCTTGCCCCTGCTCCCACCTTTCCACTTGCCT...TAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR TCA 90 bp | CCCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTCCTGTAGCTCTCCATTaGGCAGCGGCCATATCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PGPTARLPDSLSRATGISPVALH*AAAISG Trigger: TCCAGATATGGCCGCTGCTCAATGGAGAGCTACAGG...AGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR GCA 90 bp | GCAGCTTCCCCATGCCTTAAGGTCATGGTTTGGGAGACCTGCTCCCCGACACAGTACTGTGTCCCGTTGTaGAGCTCTCCCAGCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: AASPCLKVMVWETCSPTQYCVPL*SSPSWP Trigger: GGGCCAGCTGGGAGAGCTGCACAACGGGACACAGTA...CTGTGTCGGGGAGCAGGTCTCCCAAACCATGACCTTAAGGCATGGGGAAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| CDS-3UTR CCA 90 bp | CAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAGCAGCCGGTCATGTTTaGGCAGCTCCACACCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QQLGYQTASPGPLVSLAPAAGHV*AAPHPR Trigger: CCTGGGGTGTGGAGCTGCCCAAACATGACCGGCTGC...TGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR TCA 90 bp | CCCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTGTGGATCAGTCTGTCTaGGTGTCTGAGTCGATGCCT | + |
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Preference number: 4 (lower is better) Translates to: PGPTARLPDSLSRATGISVDQSV*VSESMP Trigger: AGGCATCGACTCAGACACTCAGACAGACTGATCCAC...AGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR GCA 90 bp | CTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAACCTAAGATCCGAACACAACGTGGCTTaGCCCGGTGGACCACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LPDSLSRATGISSSNLRSEHNVA*PGGPLG Trigger: GCCCAGTGGTCCACCGGGGCAAGCCACGTTGTGTTC...GGATCTTAGGTTGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CCA 90 bp | AGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAACCTAAGACAGGGGCTGGAGCTCTaGCAGGAGGAAACCCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: RLPDSLSRATGISSSNLRQGLEL*QEETPS Trigger: ACTGGGGGTTTCCTCCTGCCAGAGCTCCAGCCCCTG...TCTTAGGTTGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CCA 90 bp | CCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGGAAAGGGCTGGCCTTaGAAAAAGGGGGTATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PAQQLGYQTASPGPLVSLGKGWP*KKGVSW Trigger: CCAGGATACCCCCTTTTTCCAAGGCCAGCCCTTTCC...TAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CCA 90 bp | AGTCTCTGGAAGGAAATGCAGAAAGTGACAAGGCCTGGACAAACTGCAGCTGGAGCCCCGGTGGACCACTaGGCCCCGGTGTTGACCGTG | + |
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Preference number: 4 (lower is better) Translates to: SLWKEMQKVTRPGQTAAGAPVDH*APVLTV Trigger: CACGGTCAACACCGGGGCCCAGTGGTCCACCGGGGC...TCCAGCTGCAGTTTGTCCAGGCCTTGTCACTTTCTGCATTTCCTTCCAGAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| CDS-3UTR TCA 90 bp | GCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTGTCTGTCTGAGTGTCTaGGTCGATGCCTGCATGGAC | + |
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Preference number: 4 (lower is better) Translates to: AQQLGYQTASPGPLVSLAVCLSV*VDACMD Trigger: GTCCATGCAGGCATCGACTCAGACACTCAGACAGAC...AGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR GCA 90 bp | ACCCCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTTTGTTGTGTAGCAGCTaGTGGACTTCTGAGGCATGG | + |
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Preference number: 4 (lower is better) Translates to: TPAQQLGYQTASPGPLVSLLCSS*WTSEAW Trigger: CCATGCCTCAGAAGTCCAGCAGCTGCTACACAACAA...AGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR GCA 90 bp | CTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAACCTAAGATCCTACTGTGTCCCGTTGTaGAGCTCTCCCAGCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LPDSLSRATGISSSNLRSYCVPL*SSPSWP Trigger: GGGCCAGCTGGGAGAGCTGCACAACGGGACACAGTA...GGATCTTAGGTTGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR GCA 90 bp | CAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAAGGTGGCGGTGTGCATaGTGGTCCCAATGGACACCA | + |
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Preference number: 4 (lower is better) Translates to: QQLGYQTASPGPLVSLAPRWRCA*WSQWTP Trigger: TGGTGTCCATTGGGACCAGCATGCACACCGCCACCT...TGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR GCA 90 bp | AGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAACCTAAGACGAGAGGTGGCGGTGTaGATGCTGGTCCCAATGGAC | + |
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Preference number: 4 (lower is better) Translates to: RLPDSLSRATGISSSNLRREVAV*MLVPMD Trigger: GTCCATTGGGACCAGCATGCACACCGCCACCTCTCG...TCTTAGGTTGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CCA 90 bp | ACCCCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCCCTTGGCTTTTAACTaGGAAGCTGTGAGCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: TPAQQLGYQTASPGPLVSPLAFN*EAVSSV Trigger: CACACTGCTCACAGCTTCCCAGTTAAAAGCCAAGGG...AGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR TCA 90 bp | AGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAACCTAAGAAGGGGCAGGTCCATATaGCAGCTCCTCCAGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: RLPDSLSRATGISSSNLRRGRSI*QLLQDV Trigger: GACATCCTGGAGGAGCTGTCATATGGACCTGCCCCT...TCTTAGGTTGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR TCA 90 bp | ACTCACATTGTCTGTCACCACTTCCTTAGCACCCGCCTGTTAACCATGCCCTTCGGAGGAAACCCCCAGTaGCACGTTCCCCCAGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: THIVCHHFLSTRLLTMPFGGNPQ*HVPPEA Trigger: TGCCTCTGGGGGAACGTGTCACTGGGGGTTTCCTCC...GAAGGGCATGGTTAACAGGCGGGTGCTAAGGAAGTGGTGACAGACAATGTGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| CDS-3UTR TCA 90 bp | CTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACGACAGGGCCAGAGACTaGTGGTGGCAGGGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LLLISAMDKNTPAQQLGYDRARD*WWQGAR Trigger: CCTGGCCCCCTGCCACCATCAGTCTCTGGCCCTGTC...GTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR GCA 90 bp | CTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAACCTAAGATCCAGGTGGCGGTGTGCATaGTGGTCCCAATGGACACCA | + |
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Preference number: 4 (lower is better) Translates to: LPDSLSRATGISSSNLRSRWRCA*WSQWTP Trigger: TGGTGTCCATTGGGACCAGCATGCACACCGCCACCT...GGATCTTAGGTTGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR GCA 90 bp | CTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAACCTAAGATCCTGGGCCAGAAGTAAGTaGGAGAGGTGGCGGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LPDSLSRATGISSSNLRSWARSK*ERWRCA Trigger: TGCACACCGCCACCTCTCGCACTTACTTCTGGCCCA...GGATCTTAGGTTGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CCA 90 bp | AGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAACCTAAGAAGTAAGTGCGAGAGGTaGCGGTGTGCATGCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RLPDSLSRATGISSSNLRSKCER*RCACWS Trigger: GGACCAGCATGCACACCGCCACCTCTCGCACTTACT...TCTTAGGTTGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CCA 90 bp | CCCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTTGGACCCCCAATTCTTaGTACATGGTAGGGGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: PGPTARLPDSLSRATGISWTPNS*YMVGVV Trigger: AACAACCCCTACCATGTACCAAGAATTGGGGGTCCA...AGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR TCA 90 bp | CCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTATTAACTGGGAAGCTGTaGGCAGTGTGTCTTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PAQQLGYQTASPGPLVSLLTGKL*AVCLSG Trigger: TCCAGAAAGACACACTGCTCACAGCTTCCCAGTTAA...TAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CCA 90 bp | ACTCACATTGTCTGTCACCACTTCCTTAGCACCCGCCTGTTAACCATGCCCTTCGAGCCAGAGCAGAACTaGCGGACCTCGCGGTACTGT | + |
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Preference number: 4 (lower is better) Translates to: THIVCHHFLSTRLLTMPFEPEQN*RTSRYC Trigger: ACAGTACCGCGAGGTCCGCCAGTTCTGCTCTGGCTC...GAAGGGCATGGTTAACAGGCGGGTGCTAAGGAAGTGGTGACAGACAATGTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| CDS-3UTR CCA 90 bp | TTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACCAGCAGGGGCTGGAGCTCTaGCAGGAGGAAACCCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LLISAMDKNTPAQQLGYQQGLEL*QEETPS Trigger: ACTGGGGGTTTCCTCCTGCCAGAGCTCCAGCCCCTG...CTGGTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CCA 90 bp | CTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAACCTAAGATCCTGGCGGTGTGCATGCTaGTCCCAATGGACACCATCT | + |
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Preference number: 4 (lower is better) Translates to: LPDSLSRATGISSSNLRSWRCAC*SQWTPS Trigger: AGATGGTGTCCATTGGGACCAGCATGCACACCGCCA...GGATCTTAGGTTGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CCA 90 bp | CCCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTTTTGAATTCATAGGGTaGAAAGGGCTGGCCTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: PGPTARLPDSLSRATGISFEFIG*KGLALE Trigger: TTCCAAGGCCAGCCCTTTCCACCCTATGAATTCAAA...AGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR TCA 90 bp | TTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACCAGGAGGAAACCCCCAGTaGCACGTTCCCCCAGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: FIDISNGQEHPGPTARLPGGNPQ*HVPPEA Trigger: TGCCTCTGGGGGAACGTGTCACTGGGGGTTTCCTCC...TGGTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CCA 90 bp | CTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAACCTAAGATCCAGCTCAGCTCCCCCTTaGCTTTTAACTGGGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPDSLSRATGISSSNLRSSSAPP*LLTGKL Trigger: CAGCTTCCCAGTTAAAAGCCAAGGGGGAGCTGAGCT...GGATCTTAGGTTGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR CCA 90 bp | CAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAACAGCATGCCGGAAATaGAAGTGGAGATCTAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: QQLGYQTASPGPLVSLAPTACRK*KWRSRT Trigger: CGTCCTAGATCTCCACTTCCATTTCCGGCATGCTGT...TGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACGCAGCCGGTCATGTTTaGGCAGCTCCACACCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLISAMDKNTPAQQLGYAAGHV*AAPHPR Trigger: CCTGGGGTGTGGAGCTGCCCAAACATGACCGGCTGC...GTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR CCA 90 bp | TTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACCAGAGGCAAGTGGAAAGGTaGGAGCAGGGGCAAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLISAMDKNTPAQQLGYQRQVER*EQGQGQ Trigger: CTGGCCTTGCCCCTGCTCCCACCTTTCCACTTGCCT...CTGGTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR TCA 90 bp | CTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAACCTAAGATCCCTTCCCTGGAATGAATaGTCCATCTCTGACCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPDSLSRATGISSSNLRSLPWNE*SISDQS Trigger: GGACTGGTCAGAGATGGATCATTCATTCCAGGGAAG...GGATCTTAGGTTGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR GCA 90 bp | TTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACCAGTGGGCCAGAAGTAAGTaGGAGAGGTGGCGGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLISAMDKNTPAQQLGYQWARSK*ERWRCA Trigger: TGCACACCGCCACCTCTCGCACTTACTTCTGGCCCA...CTGGTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACCATGGAAGTGGACCATaGCGCTTCCCAGCAGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLISAMDKNTPAQQLGYHGSGP*RFPAGG Trigger: ACCGCCTGCTGGGAAGCGCCATGGTCCACTTCCATG...GTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR CCA 90 bp | CTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAACCTAAGATCCCCCTTGGCTTTTAACTaGGAAGCTGTGAGCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPDSLSRATGISSSNLRSPLAFN*EAVSSV Trigger: CACACTGCTCACAGCTTCCCAGTTAAAAGCCAAGGG...GGATCTTAGGTTGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTAGAGCCAGAGCAGAACTaGCGGACCTCGCGGTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: AFIDISNGQEHPGPTARLEPEQN*RTSRYC Trigger: ACAGTACCGCGAGGTCCGCCAGTTCTGCTCTGGCTC...TAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTAAGGGGCAGGTCCATATaGCAGCTCCTCCAGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: AFIDISNGQEHPGPTARLRGRSI*QLLQDV Trigger: GACATCCTGGAGGAGCTGTCATATGGACCTGCCCCT...TAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR TCA 90 bp | TTAACTCACATTGTCTGTCACCACTTCCTTAGCACCCGCCTGTTAACCATGCCCCCTGTAGCTCTCCATTaGGCAGCGGCCATATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTHIVCHHFLSTRLLTMPPVALH*AAAISG Trigger: TCCAGATATGGCCGCTGCTCAATGGAGAGCTACAGG...GGGCATGGTTAACAGGCGGGTGCTAAGGAAGTGGTGACAGACAATGTGAGTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
||
| CDS-3UTR TCA 90 bp | CTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACAGGCCAGCTTCTCCCTaGAGTCTGGGGGCTGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLISAMDKNTPAQQLGYRPASP*SLGAAY Trigger: ATAAGCAGCCCCCAGACTTCAGGGAGAAGCTGGCCT...GTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTAAGGCCAGCTTCTCCCTaGAGTCTGGGGGCTGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AFIDISNGQEHPGPTARLRPASP*SLGAAY Trigger: ATAAGCAGCCCCCAGACTTCAGGGAGAAGCTGGCCT...TAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR TCA 90 bp | CCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTACCATTGCATTGTATTTaGATTCATAGGGTGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PAQQLGYQTASPGPLVSLPLHCI*IHRVER Trigger: CCTTTCCACCCTATGAATTCAAATACAATGCAATGG...TAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR CCA 90 bp | ACTCACATTGTCTGTCACCACTTCCTTAGCACCCGCCTGTTAACCATGCCCTTCAGCTCAGCTCCCCCTTaGCTTTTAACTGGGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: THIVCHHFLSTRLLTMPFSSAPP*LLTGKL Trigger: CAGCTTCCCAGTTAAAAGCCAAGGGGGAGCTGAGCT...GAAGGGCATGGTTAACAGGCGGGTGCTAAGGAAGTGGTGACAGACAATGTGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
||
| CDS-3UTR CCA 90 bp | TTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACCAAGCAGCGGCCATATCTaGAGAGATCCCAGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FIDISNGQEHPGPTARLPSSGHI*RDPRGR Trigger: CCTGCCTCTGGGATCTCTCCAGATATGGCCGCTGCT...TGGTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACAGCTGCTGGACTTCTaGGGCATGGAAGTGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: AFIDISNGQEHPGPTARLQLLDF*GMEVDH Trigger: ATGGTCCACTTCCATGCCTCAGAAGTCCAGCAGCTG...TAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACCAGCTGCTGGACTTCTaGGGCATGGAAGTGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLISAMDKNTPAQQLGYQLLDF*GMEVDH Trigger: ATGGTCCACTTCCATGCCTCAGAAGTCCAGCAGCTG...GTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTCTGGAAGGAAATGCAGAAAGTGACAAGGCCTGGACAAACTGCAGCTGGACGGAGTAAACTCGGGTaGGGAAGTAGAAGCGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SLWKEMQKVTRPGQTAAGRSKLG*GSRSAQ Trigger: TTGTGCGCTTCTACTTCCTCACCCGAGTTTACTCCG...TCCAGCTGCAGTTTGTCCAGGCCTTGTCACTTTCTGCATTTCCTTCCAGAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
||
| CDS-3UTR TCA 90 bp | CTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACGTCTGTCTGAGTGTCTaGGTCGATGCCTGCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLISAMDKNTPAQQLGYVCLSV*VDACMD Trigger: GTCCATGCAGGCATCGACTCAGACACTCAGACAGAC...GTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACTGGCGGTGTGCATGCTaGTCCCAATGGACACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLISAMDKNTPAQQLGYWRCAC*SQWTPS Trigger: AGATGGTGTCCATTGGGACCAGCATGCACACCGCCA...GTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR TCA 90 bp | TTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACCAGCTTCCCTGGAATGAATaGTCCATCTCTGACCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLISAMDKNTPAQQLGYQLPWNE*SISDQS Trigger: GGACTGGTCAGAGATGGATCATTCATTCCAGGGAAG...CTGGTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTATGGACTTCTGAGGCATaGAAGTGGACCATGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AFIDISNGQEHPGPTARLWTSEA*KWTMAL Trigger: AAGCGCCATGGTCCACTTCCATGCCTCAGAAGTCCA...TAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACTGGACTTCTGAGGCATaGAAGTGGACCATGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLISAMDKNTPAQQLGYWTSEA*KWTMAL Trigger: AAGCGCCATGGTCCACTTCCATGCCTCAGAAGTCCA...GTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR GCA 90 bp | TTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACCATTGTTGTGTAGCAGCTaGTGGACTTCTGAGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: FIDISNGQEHPGPTARLPLLCSS*WTSEAW Trigger: CCATGCCTCAGAAGTCCAGCAGCTGCTACACAACAA...TGGTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACTGGACCCCCAATTCTTaGTACATGGTAGGGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLISAMDKNTPAQQLGYWTPNS*YMVGVV Trigger: AACAACCCCTACCATGTACCAAGAATTGGGGGTCCA...GTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTCTTGTCTCCCCCAAAGGTTTTATTAACTCACATTGTCTGTCACCACTTCGTGGATCAGTCTGTCTaGGTGTCTGAGTCGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLSPPKVLLTHIVCHHFVDQSV*VSESMP Trigger: AGGCATCGACTCAGACACTCAGACAGACTGATCCAC...GAAGTGGTGACAGACAATGTGAGTTAATAAAACCTTTGGGGGAGACAAGAGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| CDS-3UTR GCA 90 bp | ATAGAATTTTCAAGGGCAGAATTCAAGAAACAAGTAGAAAAGGCCAAGAAACCACTGTCGCAGAGACACTaGCAGGGGCTGGAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IEFSRAEFKKQVEKAKKPLSQRH*QGLELW Trigger: CCAGAGCTCCAGCCCCTGGCAGTGTCTCTGCGACAG...TGGTTTCTTGGCCTTTTCTACTTGTTTCTTGAATTCTGCCCTTGAAAATTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
||
| CDS-3UTR GCA 90 bp | ATAGAATTTTCAAGGGCAGAATTCAAGAAACAAGTAGAAAAGGCCAAGAAACCAGAACACAACGTGGCTTaGCCCGGTGGACCACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IEFSRAEFKKQVEKAKKPEHNVA*PGGPLG Trigger: GCCCAGTGGTCCACCGGGGCAAGCCACGTTGTGTTC...TGGTTTCTTGGCCTTTTCTACTTGTTTCTTGAATTCTGCCCTTGAAAATTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| CDS-3UTR CCA 90 bp | TTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACCATTTGAATTCATAGGGTaGAAAGGGCTGGCCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FIDISNGQEHPGPTARLPFEFIG*KGLALE Trigger: TTCCAAGGCCAGCCCTTTCCACCCTATGAATTCAAA...TGGTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR TCA 90 bp | CCCCGACACAGGAATGTCACTCTGTCCTTCCATGCTTTTATTGATATCAGCAATTTAACTGGGAAGCTGTaGGCAGTGTGTCTTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRHRNVTLSFHAFIDISNLTGKL*AVCLSG Trigger: TCCAGAAAGACACACTGCTCACAGCTTCCCAGTTAA...ATTGCTGATATCAATAAAAGCATGGAAGGACAGAGTGACATTCCTGTGTCGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| CDS-3UTR CCA 90 bp | GTGAGTTATAGAATTTTCAAGGGCAGAATTCAAGAAACAAGTAGAAAAGGCCAACATGGAAGTGGACCATaGCGCTTCCCAGCAGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSYRIFKGRIQETSRKGQHGSGP*RFPAGG Trigger: ACCGCCTGCTGGGAAGCGCCATGGTCCACTTCCATG...TTGGCCTTTTCTACTTGTTTCTTGAATTCTGCCCTTGAAAATTCTATAACTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
||
| CDS-3UTR CCA 90 bp | AATCTTGTTCAGAAGAAAGGAATTCATACATTTGTCTTAGGTACTGTGCCAGTGAGCAGCGGCCATATCTaGAGAGATCCCAGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLVQKKGIHTFVLGTVPVSSGHI*RDPRGR Trigger: CCTGCCTCTGGGATCTCTCCAGATATGGCCGCTGCT...CACTGGCACAGTACCTAAGACAAATGTATGAATTCCTTTCTTCTGAACAAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
||
| 3UTR CAA 72 bp | CCTGTGCTAGAAATTCTTCACAGATTTCTAAATAGTTaGCACAGAGGCCAAGGGCAGCTTCCCCATGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PVLEILHRFLNS*HRGQGQLPHAL Trigger: TAAGGCATGGGGAAGCTGCCCTTGGCCTCTGTGCAAACTATTTAGAAATCTGTGAAGAATTTCTAGCACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
||
| 3UTR CAA 72 bp | TGTCTTAGGTACTGTGCCAGTGCCTCTGCAAGTCTCTaGTCTCCCCCAAAGGTTTTATTAACTCACATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLRYCASASASL*SPPKVLLTHIV Trigger: GACAATGTGAGTTAATAAAACCTTTGGGGGAGACAAGAGACTTGCAGAGGCACTGGCACAGTACCTAAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
||
| CDS-3UTR CCA 90 bp | AATCTTGTTCAGAAGAAAGGAATTCATACATTTGTCTTAGGTACTGTGCCAGTGGGAAAGGGCTGGCCTTaGAAAAAGGGGGTATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLVQKKGIHTFVLGTVPVGKGWP*KKGVSW Trigger: CCAGGATACCCCCTTTTTCCAAGGCCAGCCCTTTCC...CACTGGCACAGTACCTAAGACAAATGTATGAATTCCTTTCTTCTGAACAAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
||
| CDS-3UTR GCA 90 bp | TATTTAGTGTGTATGTGTTCTTGTGAAGATGAACCTGTGCTAGAAATTCTTCACTTCCCCCAGAGGCATTaGCAAGTTCCACACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YLVCMCSCEDEPVLEILHFPQRH*QVPHQQ Trigger: CTGCTGGTGTGGAACTTGGCAATGCCTCTGGGGGAA...GTGAAGAATTTCTAGCACAGGTTCATCTTCACAAGAACACATACACACTAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
||
| CDS-3UTR CCA 90 bp | AATCTTGTTCAGAAGAAAGGAATTCATACATTTGTCTTAGGTACTGTGCCAGTGTTGTGTAGCAGCTGCTaGACTTCTGAGGCATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLVQKKGIHTFVLGTVPVLCSSC*TSEAWK Trigger: CTTCCATGCCTCAGAAGTCCAGCAGCTGCTACACAA...CACTGGCACAGTACCTAAGACAAATGTATGAATTCCTTTCTTCTGAACAAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
||
| CDS-3UTR TCA 90 bp | AGTCTCTTGTCTCCCCCAAAGGTTTTATTAACTCACATTGTCTGTCACCACTTCCCATTGCATTGTATTTaGATTCATAGGGTGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSPPKVLLTHIVCHHFPLHCI*IHRVER Trigger: CCTTTCCACCCTATGAATTCAAATACAATGCAATGG...GAAGTGGTGACAGACAATGTGAGTTAATAAAACCTTTGGGGGAGACAAGAGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
||
| CDS-3UTR CCA 90 bp | ATAGAATTTTCAAGGGCAGAATTCAAGAAACAAGTAGAAAAGGCCAAGAAACCAACAGCATGCCGGAAATaGAAGTGGAGATCTAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: IEFSRAEFKKQVEKAKKPTACRK*KWRSRT Trigger: CGTCCTAGATCTCCACTTCCATTTCCGGCATGCTGT...TGGTTTCTTGGCCTTTTCTACTTGTTTCTTGAATTCTGCCCTTGAAAATTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
||
| CDS TCA 90 bp | GACCACTGGGCCCCGGTGTTGACCGTGGGAGACAGGGCCAGAGACTaGTGGTGGCAGGGGGCCAGGCACAAAGTTCATTCCAGGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: DHWAPVLTVGDRARD*WWQGARHKVHSRAT Trigger: TGTGGCCCTGGAATGAACTTTGTGCCTGGCCCCCTGCCACCATCAGTCTCTGGCCCTGTCTCCCACGGTCAACACCGGGGCCCAGTGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR CAA 90 bp | ACCCCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCGGTACTGTGTCCCGTaGTGCAGCTCTCCCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TPAQQLGYQTASPGPLVSRYCVP*CSSPSW Trigger: CCAGCTGGGAGAGCTGCACAACGGGACACAGTACCG...AGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR CAA 90 bp | CAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAGGCAGCCGGTCATGTTaGGGCAGCTCCACACCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QQLGYQTASPGPLVSLAPGSRSC*GSSTPQ Trigger: CTGGGGTGTGGAGCTGCCCAAACATGACCGGCTGCC...TGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR CAA 90 bp | CCCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTTGGAAAGGGCTGGCCTaGGAAAAAGGGGGTATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGPTARLPDSLSRATGISWKGLA*EKGGIL Trigger: CAGGATACCCCCTTTTTCCAAGGCCAGCCCTTTCCA...AGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
||
| CDS-3UTR CAA 90 bp | CCCGGCCCAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTCCCCGCCTGTCCTGTTaGTATGTGTGGATCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGPTARLPDSLSRATGISPRLSC*YVWISL Trigger: CAGACTGATCCACACATACAAACAGGACAGGCGGGG...AGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTGGGCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS GCA 90 bp | CAATTCTTGGTACATGGTAGGGGTTGTTCAGAACACAACGTGGCTTaGCCCGGTGGACCACTGGGCCCCGGTGTTGACCGTGGGAGACAG | + |
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Preference number: 5 (lower is better) Translates to: QFLVHGRGCSEHNVA*PGGPLGPGVDRGRQ Trigger: CTGTCTCCCACGGTCAACACCGGGGCCCAGTGGTCCACCGGGGCAAGCCACGTTGTGTTCTGAACAACCCCTACCATGTACCAAGAATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CAA 90 bp | AGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAACCTAAGAAGAACACAACGTGGCTaGCCCCGGTGGACCACTGGG | + |
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Preference number: 5 (lower is better) Translates to: RLPDSLSRATGISSSNLRRTQRG*PRWTTG Trigger: CCCAGTGGTCCACCGGGGCAAGCCACGTTGTGTTCT...TCTTAGGTTGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CAA 90 bp | CAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCACCCTGTAGCTCTCCATaGAGCAGCGGCCATATCTGG | + |
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Preference number: 5 (lower is better) Translates to: QQLGYQTASPGPLVSLAPPCSSP*SSGHIW Trigger: CCAGATATGGCCGCTGCTCAATGGAGAGCTACAGGG...TGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS TCA 90 bp | TTCTCCCTGAAGTCTGGGGGCTGCTTATGGCTTCCCTGGAATGAATaGTCCATCTCTGACCAGTCCTCAATCCATGGGTCTGGCAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: FSLKSGGCLWLPWNE*SISDQSSIHGSGSR Trigger: CCGGCTGCCAGACCCATGGATTGAGGACTGGTCAGAGATGGATCATTCATTCCAGGGAAGCCATAAGCAGCCCCCAGACTTCAGGGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS CCA 90 bp | TGTTGTGTAGCAGCTGCTGGACTTCTGAGGCATGGAAGTGGACCATaGCGCTTCCCAGCAGGCGGTGTGGCATCTCGTTTTCCAAACAGA | + |
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Preference number: 5 (lower is better) Translates to: CCVAAAGLLRHGSGP*RFPAGGVASRFPNR Trigger: TCTGTTTGGAAAACGAGATGCCACACCGCCTGCTGGGAAGCGCCATGGTCCACTTCCATGCCTCAGAAGTCCAGCAGCTGCTACACAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS CCA 90 bp | CATGTTCCCGAATGGGCATGTCCCCGCCTGTCCTGTTTGTATGTGTaGATCAGTCTGTCTGAGTGTCTGAGTCGATGCCTGCATGGACCC | + |
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Preference number: 5 (lower is better) Translates to: HVPEWACPRLSCLYV*ISLSECLSRCLHGP Trigger: GGGTCCATGCAGGCATCGACTCAGACACTCAGACAGACTGATCCACACATACAAACAGGACAGGCGGGGACATGCCCATTCGGGAACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CAA 90 bp | CAACAGCTAGGCTACCAGACAGCCTCTCCAGGGCCACTGGTATCTCTAGCTCCAAAGCTCAGCTCCCCCTaGGCTTTTAACTGGGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: QQLGYQTASPGPLVSLAPKLSSP*AFNWEA Trigger: AGCTTCCCAGTTAAAAGCCAAGGGGGAGCTGAGCTT...TGGAGCTAGAGATACCAGTGGCCCTGGAGAGGCTGTCTGGTAGCCTAGCTGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CAA 90 bp | GCTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTAGGCAGCCGGTCATGTTaGGGCAGCTCCACACCCCAG | + |
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Preference number: 5 (lower is better) Translates to: AFIDISNGQEHPGPTARLGSRSC*GSSTPQ Trigger: CTGGGGTGTGGAGCTGCCCAAACATGACCGGCTGCC...TAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS TCA 90 bp | GGCATGTCCCCGCCTGTCCTGTTTGTATGTGTGGATCAGTCTGTCTaGGTGTCTGAGTCGATGCCTGCATGGACCCCCAATTCTTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: GMSPPVLFVCVDQSV*VSESMPAWTPNSWY Trigger: GTACCAAGAATTGGGGGTCCATGCAGGCATCGACTCAGACACTCAGACAGACTGATCCACACATACAAACAGGACAGGCGGGGACATGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CAA 90 bp | TTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACCACGGTACTGTGTCCCGTaGTGCAGCTCTCCCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: FIDISNGQEHPGPTARLPRYCVP*CSSPSW Trigger: CCAGCTGGGAGAGCTGCACAACGGGACACAGTACCG...TGGTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CAA 90 bp | CTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTACAGAACACAACGTGGCTaGCCCCGGTGGACCACTGGG | + |
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Preference number: 5 (lower is better) Translates to: LLLISAMDKNTPAQQLGYRTQRG*PRWTTG Trigger: CCCAGTGGTCCACCGGGGCAAGCCACGTTGTGTTCT...GTAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS TCA 90 bp | CCCGCCTGTCCTGTTTGTATGTGTGGATCAGTCTGTCTGAGTGTCTaGGTCGATGCCTGCATGGACCCCCAATTCTTGGTACATGGTAGG | + |
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Preference number: 5 (lower is better) Translates to: PACPVCMCGSVCLSV*VDACMDPQFLVHGR Trigger: CCTACCATGTACCAAGAATTGGGGGTCCATGCAGGCATCGACTCAGACACTCAGACAGACTGATCCACACATACAAACAGGACAGGCGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CAA 90 bp | GCTTTTATTGATATCAGCAATGGACAAGAACACCCCGGCCCAACAGCTAGGCTAAAGCTCAGCTCCCCCTaGGCTTTTAACTGGGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: AFIDISNGQEHPGPTARLKLSSP*AFNWEA Trigger: AGCTTCCCAGTTAAAAGCCAAGGGGGAGCTGAGCTT...TAGCCTAGCTGTTGGGCCGGGGTGTTCTTGTCCATTGCTGATATCAATAAAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS-3UTR CAA 90 bp | CCCCGACACAGGAATGTCACTCTGTCCTTCCATGCTTTTATTGATATCAGCAATCCCCGCCTGTCCTGTTaGTATGTGTGGATCAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: PRHRNVTLSFHAFIDISNPRLSC*YVWISL Trigger: CAGACTGATCCACACATACAAACAGGACAGGCGGGG...ATTGCTGATATCAATAAAAGCATGGAAGGACAGAGTGACATTCCTGTGTCGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| CDS-3UTR CAA 90 bp | ATAGAATTTTCAAGGGCAGAATTCAAGAAACAAGTAGAAAAGGCCAAGAAACCATGGAAAGGGCTGGCCTaGGAAAAAGGGGGTATCCTG | + |
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Preference number: 5 (lower is better) Translates to: IEFSRAEFKKQVEKAKKPWKGLA*EKGGIL Trigger: CAGGATACCCCCTTTTTCCAAGGCCAGCCCTTTCCA...TGGTTTCTTGGCCTTTTCTACTTGTTTCTTGAATTCTGCCCTTGAAAATTCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000089581.11 |
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| CDS CCA 72 bp | GTTCAGAACACAACGTGGCTTGCCCCGGTGGACCACTaGGCCCCGGTGTTGACCGTGGGAGACAGGGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: VQNTTWLAPVDH*APVLTVGDRAR Trigger: TCTGGCCCTGTCTCCCACGGTCAACACCGGGGCCCAGTGGTCCACCGGGGCAAGCCACGTTGTGTTCTGAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS TCA 72 bp | GCCCCGGTGTTGACCGTGGGAGACAGGGCCAGAGACTaGTGGTGGCAGGGGGCCAGGCACAAAGTTCATTCC | + |
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Preference number: 6 (lower is better) Translates to: APVLTVGDRARD*WWQGARHKVHS Trigger: GGAATGAACTTTGTGCCTGGCCCCCTGCCACCATCAGTCTCTGGCCCTGTCTCCCACGGTCAACACCGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS GCA 72 bp | GTACATGGTAGGGGTTGTTCAGAACACAACGTGGCTTaGCCCGGTGGACCACTGGGCCCCGGTGTTGACCGT | + |
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Preference number: 6 (lower is better) Translates to: VHGRGCSEHNVA*PGGPLGPGVDR Trigger: ACGGTCAACACCGGGGCCCAGTGGTCCACCGGGGCAAGCCACGTTGTGTTCTGAACAACCCCTACCATGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS CCA 72 bp | GCAGCTGCTGGACTTCTGAGGCATGGAAGTGGACCATaGCGCTTCCCAGCAGGCGGTGTGGCATCTCGTTTT | + |
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Preference number: 6 (lower is better) Translates to: AAAGLLRHGSGP*RFPAGGVASRF Trigger: AAAACGAGATGCCACACCGCCTGCTGGGAAGCGCCATGGTCCACTTCCATGCCTCAGAAGTCCAGCAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS CAA 90 bp | TATCCAGGCCATGTTCCCGAATGGGCATGTCCCCGCCTGTCCTGTTaGTATGTGTGGATCAGTCTGTCTGAGTGTCTGAGTCGATGCCTG | + |
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Preference number: 6 (lower is better) Translates to: YPGHVPEWACPRLSC*YVWISLSECLSRCL Trigger: CAGGCATCGACTCAGACACTCAGACAGACTGATCCACACATACAAACAGGACAGGCGGGGACATGCCCATTCGGGAACATGGCCTGGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS TCA 72 bp | CCGCCTGTCCTGTTTGTATGTGTGGATCAGTCTGTCTaGGTGTCTGAGTCGATGCCTGCATGGACCCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: PPVLFVCVDQSV*VSESMPAWTPN Trigger: ATTGGGGGTCCATGCAGGCATCGACTCAGACACTCAGACAGACTGATCCACACATACAAACAGGACAGGCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS CCA 72 bp | GTGTCTGAGTCGATGCCTGCATGGACCCCCAATTCTTaGTACATGGTAGGGGTTGTTCAGAACACAACGTGG | + |
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Preference number: 6 (lower is better) Translates to: VSESMPAWTPNS*YMVGVVQNTTW Trigger: CCACGTTGTGTTCTGAACAACCCCTACCATGTACCAAGAATTGGGGGTCCATGCAGGCATCGACTCAGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS CAA 72 bp | CATGTTCCCGAATGGGCATGTCCCCGCCTGTCCTGTTaGTATGTGTGGATCAGTCTGTCTGAGTGTCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: HVPEWACPRLSC*YVWISLSECLS Trigger: ACTCAGACACTCAGACAGACTGATCCACACATACAAACAGGACAGGCGGGGACATGCCCATTCGGGAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS TCA 72 bp | AAGTCTGGGGGCTGCTTATGGCTTCCCTGGAATGAATaGTCCATCTCTGACCAGTCCTCAATCCATGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: KSGGCLWLPWNE*SISDQSSIHGS Trigger: AGACCCATGGATTGAGGACTGGTCAGAGATGGATCATTCATTCCAGGGAAGCCATAAGCAGCCCCCAGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS TCA 72 bp | CCTGTTTGTATGTGTGGATCAGTCTGTCTGAGTGTCTaGGTCGATGCCTGCATGGACCCCCAATTCTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: PVCMCGSVCLSV*VDACMDPQFLV Trigger: TACCAAGAATTGGGGGTCCATGCAGGCATCGACTCAGACACTCAGACAGACTGATCCACACATACAAACAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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| CDS CCA 72 bp | AAGTTCCACACCAGCAGACAAGAGTCTGGTAAAACCTaGTCCATTCGTACAAAGACTCGTTCCAGGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: KFHTSRQESGKT*SIRTKTRSRFS Trigger: GGAGAACCTGGAACGAGTCTTTGTACGAATGGACCAGGTTTTACCAGACTCTTGTCTGCTGGTGTGGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089581.11 ENSMUST00000110277.2 |
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