Pregenerated sensors for PCDHGC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000102918Ensembl transcript IDs: ENSMUST00000076807.7, ENSMUST00000192103.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGTACAGGTGCGGTGGCATTAGGCCTCCTCGCACCGCGTCTGCGTaGAAGGAGGGCCCTGGGGTTCGGTACAGGGAGCTCACTGGAGCT | + |
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Preference number: 1 (lower is better) Translates to: WYRCGGIRPPRTASA*KEGPGVRYRELTGA Trigger: AGCTCCAGTGAGCTCCCTGTACCGAACCCCAGGGCCCTCCTTGCACGCAGACGCGGTGCGAGGAGGCCTAATGCCACCGCACCTGTACCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR CCA 90 bp | TTGTGCCCTGCATCTGCGTCCCAGCCTACCACCCGTGAGACCACGTaGCCCGCAGCTGTACCTCGAGGCAGCATCTCCACCGAACTCTGG | + |
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Preference number: 1 (lower is better) Translates to: LCPASASQPTTRETT*PAAVPRGSISTELW Trigger: CCAGAGTTCGGTGGAGATGCTGCCTCGAGGTACAGCTGCGGGCCACGTGGTCTCACGGGTGGTAGGCTGGGACGCAGATGCAGGGCACAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR CCA 90 bp | CAGGATCACAACTTCGCAGCGTGTTCTGGCGGCTGGCCAGTGGGCTaGCAGCACCAGGCTTCTTCAGCAGTGGGTCGCTGCGGCGAGAGT | + |
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Preference number: 1 (lower is better) Translates to: QDHNFAACSGGWPVG*QHQASSAVGRCGES Trigger: ACTCTCGCCGCAGCGACCCACTGCTGAAGAAGCCTGGTGCTGCCAGCCCACTGGCCAGCCGCCAGAACACGCTGCGAAGTTGTGATCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR TCA 90 bp | TTCAGCAGTGGGTCGCTGCGGCGAGAGTCCGTGGTGAGGTACACCTaGTGGTACAGGTGCGGTGGCATTAGGCCTCCTCGCACCGCGTCT | + |
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Preference number: 1 (lower is better) Translates to: FSSGSLRRESVVRYT*WYRCGGIRPPRTAS Trigger: AGACGCGGTGCGAGGAGGCCTAATGCCACCGCACCTGTACCATCAGGTGTACCTCACCACGGACTCTCGCCGCAGCGACCCACTGCTGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR TCA 90 bp | CACCAGGCTTCTTCAGCAGTGGGTCGCTGCGGCGAGAGTCCGTGGTaGGGTACACCTGATGGTACAGGTGCGGTGGCATTAGGCCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: HQASSAVGRCGESPW*GTPDGTGAVALGLL Trigger: GAGGAGGCCTAATGCCACCGCACCTGTACCATCAGGTGTACCTCACCACGGACTCTCGCCGCAGCGACCCACTGCTGAAGAAGCCTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR TCA 90 bp | GCCAGAAGGGAACTCGGCCCGGGCTTCCGGAGACTCCTCAGTTACTaGCACAGTCAGGGTGGCGGTGGTGGAGAGCAAAGGTTCTCCACT | + |
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Preference number: 1 (lower is better) Translates to: ARRELGPGFRRLLSY*HSQGGGGGEQRFST Trigger: AGTGGAGAACCTTTGCTCTCCACCACCGCCACCCTGACTGTGTCAGTAACTGAGGAGTCTCCGGAAGCCCGGGCCGAGTTCCCTTCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR GCA 90 bp | CCTTGCCATCTCGTTTGCCAGCGGCATTGGTCAGCGTGGCATTGCTaGCAGGGATGTACACGTTCTGGCGGTAGTCAGGCACGTGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: PCHLVCQRHWSAWHC*QGCTRSGGSQARAA Trigger: TGCAGCACGTGCCTGACTACCGCCAGAACGTGTACATCCCTGGCAGCAATGCCACGCTGACCAATGCCGCTGGCAAACGAGATGGCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR GCA 90 bp | GAGCCTTGCCATCTCGTTTGCCAGCGGCATTGGTCAGCGTGGCATTaGTGCCAGGGATGTACACGTTCTGGCGGTAGTCAGGCACGTGCT | + |
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Preference number: 1 (lower is better) Translates to: EPCHLVCQRHWSAWH*CQGCTRSGGSQARA Trigger: AGCACGTGCCTGACTACCGCCAGAACGTGTACATCCCTGGCAGCAATGCCACGCTGACCAATGCCGCTGGCAAACGAGATGGCAAGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR CCA 90 bp | CGGCCCGGGCTTCCGGAGACTCCTCAGTTACTGACACAGTCAGGGTaGCGGTGGTGGAGAGCAAAGGTTCTCCACTGTCTGAGATCAAGA | + |
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Preference number: 1 (lower is better) Translates to: RPGLPETPQLLTQSG*RWWRAKVLHCLRSR Trigger: TCTTGATCTCAGACAGTGGAGAACCTTTGCTCTCCACCACCGCCACCCTGACTGTGTCAGTAACTGAGGAGTCTCCGGAAGCCCGGGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR CCA 90 bp | GTCTGCGTGCAAGGAGGGCCCTGGGGTTCGGTACAGGGAGCTCACTaGAGCTCGGTAGAGGTCCCTAGACCGCTTCCACTTGTAAACTTT | + |
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Preference number: 1 (lower is better) Translates to: VCVQGGPWGSVQGAH*SSVEVPRPLPLVNF Trigger: AAAGTTTACAAGTGGAAGCGGTCTAGGGACCTCTACCGAGCTCCAGTGAGCTCCCTGTACCGAACCCCAGGGCCCTCCTTGCACGCAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR TCA 90 bp | GAATCTGCCTTGGTGAATCTGTGTCCTGGATTGGGCGGGCAGTGCTaGTCTGACCCGTGTGAAGCCCCACGGCAAAAAGGCTCTGGTTGG | + |
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Preference number: 1 (lower is better) Translates to: ESALVNLCPGLGGQC*SDPCEAPRQKGSGW Trigger: CCAACCAGAGCCTTTTTGCCGTGGGGCTTCACACGGGTCAGATCAGCACTGCCCGCCCAATCCAGGACACAGATTCACCAAGGCAGATTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR GCA 90 bp | GAGCTCCCATCAGCAGCTTCGCTGGCAGAGGCCAAGATCATGGCTTaGAGCATCTCTGTATCAAACTGGTTGTTGGGCCAGGTGCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: ELPSAASLAEAKIMA*SISVSNWLLGQVPV Trigger: AACTGGCACCTGGCCCAACAACCAGTTTGATACAGAGATGCTGCAAGCCATGATCTTGGCCTCTGCCAGCGAAGCTGCTGATGGGAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR GCA 90 bp | TCTTCTTGTTGCCATTACCACCTGCTGGAGCCTTGCCATCTCGTTTaGCAGCGGCATTGGTCAGCGTGGCATTGCTGCCAGGGATGTACA | + |
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Preference number: 1 (lower is better) Translates to: SSCCHYHLLEPCHLV*QRHWSAWHCCQGCT Trigger: TGTACATCCCTGGCAGCAATGCCACGCTGACCAATGCCGCTGGCAAACGAGATGGCAAGGCTCCAGCAGGTGGTAATGGCAACAAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR GCA 90 bp | TCTTGCCCGATTTCTTCTTGTTGCCATTACCACCTGCTGGAGCCTTaGCATCTCGTTTGCCAGCGGCATTGGTCAGCGTGGCATTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: SCPISSCCHYHLLEP*HLVCQRHWSAWHCC Trigger: GCAGCAATGCCACGCTGACCAATGCCGCTGGCAAACGAGATGGCAAGGCTCCAGCAGGTGGTAATGGCAACAAGAAGAAATCGGGCAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR TCA 90 bp | CGGTGGTGGAGAGCAAAGGTTCTCCACTGTCTGAGATCAAGACTGTaGGAATCTGCCTTGGTGAATCTGTGTCCTGGATTGGGCGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: RWWRAKVLHCLRSRL*ESALVNLCPGLGGQ Trigger: CTGCCCGCCCAATCCAGGACACAGATTCACCAAGGCAGATTCTCACAGTCTTGATCTCAGACAGTGGAGAACCTTTGCTCTCCACCACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR CCA 90 bp | ACGATTTATTGTGAAATAGCGACTCACGAGCCCAGTTTCCGCTCCTaGTTCCAAGAGAAAGAAGGAAAGGCGGGCATTGGGCGGGGCGTC | + |
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Preference number: 1 (lower is better) Translates to: TIYCEIATHEPSFRS*FQEKEGKAGIGRGV Trigger: GACGCCCCGCCCAATGCCCGCCTTTCCTTCTTTCTCTTGGAACCAGGAGCGGAAACTGGGCTCGTGAGTCGCTATTTCACAATAAATCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR GCA 90 bp | TCATGGCTTGCAGCATCTCTGTATCAAACTGGTTGTTGGGCCAGGTaGCAGTTTCATCACCATTTTGGGATCCGCTCGTGCCGGGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: SWLAASLYQTGCWAR*QFHHHFGIRSCRVS Trigger: AGAGACCCGGCACGAGCGGATCCCAAAATGGTGATGAAACTGGCACCTGGCCCAACAACCAGTTTGATACAGAGATGCTGCAAGCCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR GCA 90 bp | GAGAGCAAAGGTTCTCCACTGTCTGAGATCAAGACTGTGAGAATCTaGCTTGGTGAATCTGTGTCCTGGATTGGGCGGGCAGTGCTGATC | + |
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Preference number: 1 (lower is better) Translates to: ESKGSPLSEIKTVRI*LGESVSWIGRAVLI Trigger: GATCAGCACTGCCCGCCCAATCCAGGACACAGATTCACCAAGGCAGATTCTCACAGTCTTGATCTCAGACAGTGGAGAACCTTTGCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR GCA 90 bp | CTTCTTCTCTTTCTTGCCCGATTTCTTCTTGTTGCCATTACCACCTaGTGGAGCCTTGCCATCTCGTTTGCCAGCGGCATTGGTCAGCGT | + |
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Preference number: 1 (lower is better) Translates to: LLLFLARFLLVAITT*WSLAISFASGIGQR Trigger: ACGCTGACCAATGCCGCTGGCAAACGAGATGGCAAGGCTCCAGCAGGTGGTAATGGCAACAAGAAGAAATCGGGCAAGAAAGAGAAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR CCA 90 bp | CTGGCAGAGGCCAAGATCATGGCTTGCAGCATCTCTGTATCAAACTaGTTGTTGGGCCAGGTGCCAGTTTCATCACCATTTTGGGATCCG | + |
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Preference number: 1 (lower is better) Translates to: LAEAKIMACSISVSN*LLGQVPVSSPFWDP Trigger: CGGATCCCAAAATGGTGATGAAACTGGCACCTGGCCCAACAACCAGTTTGATACAGAGATGCTGCAAGCCATGATCTTGGCCTCTGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGGCACGTGTTTCTGTTTCCCAACGGGGAGCATGGCCCTGGCTCCTACCAGTCTTCGCAGCGTGTTCTaGCGGCTGGCCAGTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LGTCFCFPTGSMALAPTSLRSVF*RLASGL Trigger: CAGCCCACTGGCCAGCCGCCAGAACACGCTGCGAAG...ACTGGTAGGAGCCAGGGCCATGCTCCCCGTTGGGAAACAGAAACACGTGCCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR CCA 90 bp | CGCCGCAGCGTGTGGACACAGCACAAAACACAGCACGGGCCGCGCAGGCAGATTCAAAAAGGCTCTGGTTaGGGGCTCCCAAGAGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: RRSVWTQHKTQHGPRRQIQKGSG*GLPRGC Trigger: ACAGCCTCTTGGGAGCCCCCAACCAGAGCCTTTTTG...AATCTGCCTGCGCGGCCCGTGCTGTGTTTTGTGCTGTGTCCACACGCTGCGGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR CCA 90 bp | AACTCGGCCCGGGCTTCCGGAGACTCCTCAGTTACTGACACAGTCAGGGTGGCGGGTGAATCTGTGTCCTaGATTGGGCGGGCAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: NSARASGDSSVTDTVRVAGESVS*IGRAVL Trigger: CAGCACTGCCCGCCCAATCCAGGACACAGATTCACC...CGCCACCCTGACTGTGTCAGTAACTGAGGAGTCTCCGGAAGCCCGGGCCGAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGGCACGTGTTTCTGTTTCCCAACGGGGAGCATGGCCCTGGCTCCTACCAGTATTGTGCCCTGCATCTaGGTCCCAGCCTACCACCCG | + |
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Preference number: 2 (lower is better) Translates to: LGTCFCFPTGSMALAPTSIVPCI*VPAYHP Trigger: CGGGTGGTAGGCTGGGACGCAGATGCAGGGCACAAT...ACTGGTAGGAGCCAGGGCCATGCTCCCCGTTGGGAAACAGAAACACGTGCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR TCA 90 bp | GCGAGAGATATCGGAAGGGGGATGGGCAGGAGCTACGTGACTATGCGAAGAGAATTGGGCGGGCAGTGCTaGTCTGACCCGTGTGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: ARDIGRGMGRSYVTMRRELGGQC*SDPCEA Trigger: GGCTTCACACGGGTCAGATCAGCACTGCCCGCCCAA...TTCTCTTCGCATAGTCACGTAGCTCCTGCCCATCCCCCTTCCGATATCTCTCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCAGCACCAGGCTTCTTCAGCAGTGGGTCGCTGCGGCGAGAGTCCGTGGTGCTGAGATCAAGACTGTaGGAATCTGCCTTGGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: LAAPGFFSSGSLRRESVVLRSRL*ESALVN Trigger: ATTCACCAAGGCAGATTCTCACAGTCTTGATCTCAG...CACCACGGACTCTCGCCGCAGCGACCCACTGCTGAAGAAGCCTGGTGCTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGGCTTGGGCACGTGTTTCTGTTTCCCAACGGGGAGCATGGCCCTGGCTCCTTCACTCCCAACACTGTaGCTGCGAATCCCACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: VGLGTCFCFPTGSMALAPSLPTL*LRIPQR Trigger: TCTCTGTGGGATTCGCAGTCACAGTGTTGGGAGTGA...AGGAGCCAGGGCCATGCTCCCCGTTGGGAAACAGAAACACGTGCCCAAGCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR GCA 90 bp | CGGGTCTCTGGGCTTGAGAGAAACGCCAGTCAGTGTTGGGCGGGGCTTGCTGTCTCCCAACACTGTGACTaGGAATCCCACAGAGACCAA | + |
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Preference number: 2 (lower is better) Translates to: RVSGLERNASQCWAGLAVSQHCD*ESHRDQ Trigger: TTGGTCTCTGTGGGATTCGCAGTCACAGTGTTGGGA...GACAGCAAGCCCCGCCCAACACTGACTGGCGTTTCTCTCAAGCCCAGAGACCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGGCACGTGTTTCTGTTTCCCAACGGGGAGCATGGCCCTGGCTCCTACCAGTATCTGTGTCCTGGATTaGGCGGGCAGTGCTGATCTG | + |
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Preference number: 2 (lower is better) Translates to: LGTCFCFPTGSMALAPTSICVLD*AGSADL Trigger: CAGATCAGCACTGCCCGCCCAATCCAGGACACAGAT...ACTGGTAGGAGCCAGGGCCATGCTCCCCGTTGGGAAACAGAAACACGTGCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR CCA 90 bp | CGCCGCAGCGTGTGGACACAGCACAAAACACAGCACGGGCCGCGCAGGCAGATTCAGAGGCCAAGATCATaGCTTGCAGCATCTCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: RRSVWTQHKTQHGPRRQIQRPRS*LAASLY Trigger: ATACAGAGATGCTGCAAGCCATGATCTTGGCCTCTG...AATCTGCCTGCGCGGCCCGTGCTGTGTTTTGTGCTGTGTCCACACGCTGCGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR TCA 90 bp | GCGAGAGATATCGGAAGGGGGATGGGCAGGAGCTACGTGACTATGCGAAGAGAAGGCGAGAGTCCGTGGTaGGGTACACCTGATGGTACA | + |
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Preference number: 2 (lower is better) Translates to: ARDIGRGMGRSYVTMRREGESPW*GTPDGT Trigger: TGTACCATCAGGTGTACCTCACCACGGACTCTCGCC...TTCTCTTCGCATAGTCACGTAGCTCCTGCCCATCCCCCTTCCGATATCTCTCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR CAA 90 bp | CCAGTTTCCGCTCCTGGTTCCAAGAGAAAGAAGGAAAGGCGGGCATaGGGCGGGGCGTCGGGGTCCCAGACACTTAGGTTTAATATAGGA | + |
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Preference number: 2 (lower is better) Translates to: PVSAPGSKRKKERRA*GGASGSQTLRFNIG Trigger: TCCTATATTAAACCTAAGTGTCTGGGACCCCGACGCCCCGCCCAATGCCCGCCTTTCCTTCTTTCTCTTGGAACCAGGAGCGGAAACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR CAA 90 bp | AGAGCTCCCATCAGCAGCTTCGCTGGCAGAGGCCAAGATCATGGCTaGCAGCATCTCTGTATCAAACTGGTTGTTGGGCCAGGTGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: RAPISSFAGRGQDHG*QHLCIKLVVGPGAS Trigger: ACTGGCACCTGGCCCAACAACCAGTTTGATACAGAGATGCTGCAAGCCATGATCTTGGCCTCTGCCAGCGAAGCTGCTGATGGGAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR TCA 90 bp | CGGGTCTCTGGGCTTGAGAGAAACGCCAGTCAGTGTTGGGCGGGGCTTGCTGTCTGTCACGATTTATTGTaGAATAGCGACTCACGAGCC | + |
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Preference number: 2 (lower is better) Translates to: RVSGLERNASQCWAGLAVCHDLL*NSDSRA Trigger: GGCTCGTGAGTCGCTATTTCACAATAAATCGTGACA...GACAGCAAGCCCCGCCCAACACTGACTGGCGTTTCTCTCAAGCCCAGAGACCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAATATGATCACTCCCAACACTGTGACTGCGAATCCCACAGAGACCAAGATTAGGAAAGGCGGGCATTaGGCGGGGCGTCGGGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LNMITPNTVTANPTETKIRKGGH*AGRRGP Trigger: GGGACCCCGACGCCCCGCCCAATGCCCGCCTTTCCT...AATCTTGGTCTCTGTGGGATTCGCAGTCACAGTGTTGGGAGTGATCATATTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTGAACCAGAATGGAGGGGTCTGGCCTGGTGTTTGTCTATGGCTAGAATGCAGTCAGGGTGGCGGTaGTGGAGAGCAAAGGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: QAEPEWRGLAWCLSMARMQSGWR*WRAKVL Trigger: GAGAACCTTTGCTCTCCACCACCGCCACCCTGACTG...CATTCTAGCCATAGACAAACACCAGGCCAGACCCCTCCATTCTGGTTCAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAGCATCATCAGTACCAGAGGGAGGGTGCCTGTTCCCCCAAAACTTAAGCATAGGCTTCTTCAGCAGTaGGTCGCTGCGGCGAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: ASIISTRGRVPVPPKLKHRLLQQ*VAAARV Trigger: GACTCTCGCCGCAGCGACCCACTGCTGAAGAAGCCT...ATGCTTAAGTTTTGGGGGAACAGGCACCCTCCCTCTGGTACTGATGATGCTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGGCTTGGGCACGTGTTTCTGTTTCCCAACGGGGAGCATGGCCCTGGCTCCTTATCAAACTGGTTGTTaGGCCAGGTGCCAGTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: VGLGTCFCFPTGSMALAPYQTGC*ARCQFH Trigger: ATGAAACTGGCACCTGGCCCAACAACCAGTTTGATA...AGGAGCCAGGGCCATGCTCCCCGTTGGGAAACAGAAACACGTGCCCAAGCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGCTCACTGGAGCTCGGTAGAGGTCCCTAGACCGCTTCCACTTGTAAACTTTGAGGAGGATTGTCGTTaGTGTCGGACACTTGGACCT | + |
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Preference number: 2 (lower is better) Translates to: GAHWSSVEVPRPLPLVNFEEDCR*CRTLGP Trigger: AGGTCCAAGTGTCCGACATCAACGACAATCCTCCTC...AAAGTTTACAAGTGGAAGCGGTCTAGGGACCTCTACCGAGCTCCAGTGAGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCCATCTCGTTTGCCAGCGGCATTGGTCAGCGTGGCATTGCTGCCAGGGATGAAGACTGTGAGAATCTaGCTTGGTGAATCTGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: LPSRLPAALVSVALLPGMKTVRI*LGESVS Trigger: GGACACAGATTCACCAAGGCAGATTCTCACAGTCTT...CATCCCTGGCAGCAATGCCACGCTGACCAATGCCGCTGGCAAACGAGATGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGACTGGTACCAAACCATGCTTTGGGGGAAAGCTGAACTGAAGGAGAGGCCAGTTGCCATTACCACCTaGTGGAGCCTTGCCATCTCG | + |
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Preference number: 2 (lower is better) Translates to: EDWYQTMLWGKAELKERPVAITT*WSLAIS Trigger: CGAGATGGCAAGGCTCCAGCAGGTGGTAATGGCAAC...TGGCCTCTCCTTCAGTTCAGCTTTCCCCCAAAGCATGGTTTGGTACCAGTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCCCCTGGGTACATACAGAGCCCCTTGCAAGACCCTATTAACAGGCTGTTTTACGGCAAAAAGGCTCTaGTTGGGGGCTCCCAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SPLGTYRAPCKTLLTGCFTAKRL*LGAPKR Trigger: CCTCTTGGGAGCCCCCAACCAGAGCCTTTTTGCCGT...AAAACAGCCTGTTAATAGGGTCTTGCAAGGGGCTCTGTATGTACCCAGGGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR CAA 90 bp | GAGGCCAAGATCATGGCTTGCAGCATCTCTGTATCAAACTGGTTGTaGGGCCAGGTGCCAGTTTCATCACCATTTTGGGATCCGCTCGTG | + |
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Preference number: 2 (lower is better) Translates to: EAKIMACSISVSNWL*GQVPVSSPFWDPLV Trigger: CACGAGCGGATCCCAAAATGGTGATGAAACTGGCACCTGGCCCAACAACCAGTTTGATACAGAGATGCTGCAAGCCATGATCTTGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR CAA 90 bp | GCAGAGGCCAAGATCATGGCTTGCAGCATCTCTGTATCAAACTGGTaGTTGGGCCAGGTGCCAGTTTCATCACCATTTTGGGATCCGCTC | + |
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Preference number: 2 (lower is better) Translates to: AEAKIMACSISVSNW*LGQVPVSSPFWDPL Trigger: GAGCGGATCCCAAAATGGTGATGAAACTGGCACCTGGCCCAACAACCAGTTTGATACAGAGATGCTGCAAGCCATGATCTTGGCCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAATATGATCACTCCCAACACTGTGACTGCGAATCCCACAGAGACCAAGATTCTGTTCTCGGGGAGCTaGGCCAGAAGGGAACTCGGC | + |
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Preference number: 2 (lower is better) Translates to: LNMITPNTVTANPTETKILFSGS*ARRELG Trigger: GCCGAGTTCCCTTCTGGCTCAGCTCCCCGAGAACAG...AATCTTGGTCTCTGTGGGATTCGCAGTCACAGTGTTGGGAGTGATCATATTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAGCATCATCAGTACCAGAGGGAGGGTGCCTGTTCCCCCAAAACTTAAGCATCAAATACGTTCACGCTaGTGTTGGTGGCTAAGACTG | + |
|
Preference number: 2 (lower is better) Translates to: ASIISTRGRVPVPPKLKHQIRSR*CWWLRL Trigger: CAGTCTTAGCCACCAACATCAGCGTGAACGTATTTG...ATGCTTAAGTTTTGGGGGAACAGGCACCCTCCCTCTGGTACTGATGATGCTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCCCCTGGGTACATACAGAGCCCCTTGCAAGACCCTATTAACAGGCTGTTTTGAGAATCTGCCTTGGTaGATCTGTGTCCTGGATTGG | + |
|
Preference number: 2 (lower is better) Translates to: SPLGTYRAPCKTLLTGCFENLPW*ICVLDW Trigger: CCAATCCAGGACACAGATTCACCAAGGCAGATTCTC...AAAACAGCCTGTTAATAGGGTCTTGCAAGGGGCTCTGTATGTACCCAGGGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR GCA 72 bp | TGCGGTGGCATTAGGCCTCCTCGCACCGCGTCTGCGTaGAAGGAGGGCCCTGGGGTTCGGTACAGGGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: CGGIRPPRTASA*KEGPGVRYREL Trigger: GAGCTCCCTGTACCGAACCCCAGGGCCCTCCTTGCACGCAGACGCGGTGCGAGGAGGCCTAATGCCACCGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR CCA 72 bp | GCATCTGCGTCCCAGCCTACCACCCGTGAGACCACGTaGCCCGCAGCTGTACCTCGAGGCAGCATCTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: ASASQPTTRETT*PAAVPRGSIST Trigger: GGTGGAGATGCTGCCTCGAGGTACAGCTGCGGGCCACGTGGTCTCACGGGTGGTAGGCTGGGACGCAGATGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR CCA 72 bp | GGCCAGTGGGCTGGCAGCACCAGGCTTCTTCAGCAGTaGGTCGCTGCGGCGAGAGTCCGTGGTGAGGTACAC | + |
|
Preference number: 3 (lower is better) Translates to: GQWAGSTRLLQQ*VAAARVRGEVH Trigger: GTGTACCTCACCACGGACTCTCGCCGCAGCGACCCACTGCTGAAGAAGCCTGGTGCTGCCAGCCCACTGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR TCA 72 bp | ATTGTGCCCTGCATCTGCGTCCCAGCCTACCACCCGTaGGACCACGTGGCCCGCAGCTGTACCTCGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: IVPCICVPAYHP*DHVARSCTSRQ Trigger: CTGCCTCGAGGTACAGCTGCGGGCCACGTGGTCTCACGGGTGGTAGGCTGGGACGCAGATGCAGGGCACAAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR CCA 72 bp | AACTTCGCAGCGTGTTCTGGCGGCTGGCCAGTGGGCTaGCAGCACCAGGCTTCTTCAGCAGTGGGTCGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: NFAACSGGWPVG*QHQASSAVGRC Trigger: GCAGCGACCCACTGCTGAAGAAGCCTGGTGCTGCCAGCCCACTGGCCAGCCGCCAGAACACGCTGCGAAGTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR-3UTR CAA 90 bp | CGCCGCAGCGTGTGGACACAGCACAAAACACAGCACGGGCCGCGCAGGCAGATTGCCGGGTCTCTGGGCTaGAGAGAAACGCCAGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RRSVWTQHKTQHGPRRQIAGSLG*RETPVS Trigger: ACTGACTGGCGTTTCTCTCAAGCCCAGAGACCCGGC...AATCTGCCTGCGCGGCCCGTGCTGTGTTTTGTGCTGTGTCCACACGCTGCGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR TCA 72 bp | GAACTCGGCCCGGGCTTCCGGAGACTCCTCAGTTACTaGCACAGTCAGGGTGGCGGTGGTGGAGAGCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ELGPGFRRLLSY*HSQGGGGGEQR Trigger: CCTTTGCTCTCCACCACCGCCACCCTGACTGTGTCAGTAACTGAGGAGTCTCCGGAAGCCCGGGCCGAGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR CCA 72 bp | CAAGGAGGGCCCTGGGGTTCGGTACAGGGAGCTCACTaGAGCTCGGTAGAGGTCCCTAGACCGCTTCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: QGGPWGSVQGAH*SSVEVPRPLPL Trigger: AAGTGGAAGCGGTCTAGGGACCTCTACCGAGCTCCAGTGAGCTCCCTGTACCGAACCCCAGGGCCCTCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR TCA 72 bp | TCTTCAGCAGTGGGTCGCTGCGGCGAGAGTCCGTGGTaGGGTACACCTGATGGTACAGGTGCGGTGGCATTA | + |
|
Preference number: 3 (lower is better) Translates to: SSAVGRCGESPW*GTPDGTGAVAL Trigger: TAATGCCACCGCACCTGTACCATCAGGTGTACCTCACCACGGACTCTCGCCGCAGCGACCCACTGCTGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR GCA 72 bp | CTCGTTTGCCAGCGGCATTGGTCAGCGTGGCATTGCTaGCAGGGATGTACACGTTCTGGCGGTAGTCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LVCQRHWSAWHC*QGCTRSGGSQA Trigger: TGCCTGACTACCGCCAGAACGTGTACATCCCTGGCAGCAATGCCACGCTGACCAATGCCGCTGGCAAACGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR GCA 72 bp | TGCCATTACCACCTGCTGGAGCCTTGCCATCTCGTTTaGCAGCGGCATTGGTCAGCGTGGCATTGCTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CHYHLLEPCHLV*QRHWSAWHCCQ Trigger: CTGGCAGCAATGCCACGCTGACCAATGCCGCTGGCAAACGAGATGGCAAGGCTCCAGCAGGTGGTAATGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR CCA 72 bp | CCTTGCCATCTCGTTTGCCAGCGGCATTGGTCAGCGTaGCATTGCTGCCAGGGATGTACACGTTCTGGCGGT | + |
|
Preference number: 3 (lower is better) Translates to: PCHLVCQRHWSA*HCCQGCTRSGG Trigger: ACCGCCAGAACGTGTACATCCCTGGCAGCAATGCCACGCTGACCAATGCCGCTGGCAAACGAGATGGCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR CCA 72 bp | CTGCTGGAGCCTTGCCATCTCGTTTGCCAGCGGCATTaGTCAGCGTGGCATTGCTGCCAGGGATGTACACGT | + |
|
Preference number: 3 (lower is better) Translates to: LLEPCHLVCQRH*SAWHCCQGCTR Trigger: ACGTGTACATCCCTGGCAGCAATGCCACGCTGACCAATGCCGCTGGCAAACGAGATGGCAAGGCTCCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR TCA 72 bp | TTGGTGAATCTGTGTCCTGGATTGGGCGGGCAGTGCTaGTCTGACCCGTGTGAAGCCCCACGGCAAAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LVNLCPGLGGQC*SDPCEAPRQKG Trigger: GCCTTTTTGCCGTGGGGCTTCACACGGGTCAGATCAGCACTGCCCGCCCAATCCAGGACACAGATTCACCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR GCA 72 bp | CATCTCGTTTGCCAGCGGCATTGGTCAGCGTGGCATTaGTGCCAGGGATGTACACGTTCTGGCGGTAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HLVCQRHWSAWH*CQGCTRSGGSQ Trigger: CTGACTACCGCCAGAACGTGTACATCCCTGGCAGCAATGCCACGCTGACCAATGCCGCTGGCAAACGAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR CCA 72 bp | CTCCTGGTTCCAAGAGAAAGAAGGAAAGGCGGGCATTaGGCGGGGCGTCGGGGTCCCAGACACTTAGGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LLVPRERRKGGH*AGRRGPRHLGL Trigger: TAAACCTAAGTGTCTGGGACCCCGACGCCCCGCCCAATGCCCGCCTTTCCTTCTTTCTCTTGGAACCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR CCA 72 bp | CTTCCGGAGACTCCTCAGTTACTGACACAGTCAGGGTaGCGGTGGTGGAGAGCAAAGGTTCTCCACTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LPETPQLLTQSG*RWWRAKVLHCL Trigger: CAGACAGTGGAGAACCTTTGCTCTCCACCACCGCCACCCTGACTGTGTCAGTAACTGAGGAGTCTCCGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGCATCATCAGTACCAGAGGGAGGGTGCCTGTTCCCCCAAAACTTAAGCATAAACGCCAGTCAGTGTaGGGCGGGGCTTGCTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ASIISTRGRVPVPPKLKHKRQSV*GGACCP Trigger: TGGACAGCAAGCCCCGCCCAACACTGACTGGCGTTT...ATGCTTAAGTTTTGGGGGAACAGGCACCCTCCCTCTGGTACTGATGATGCTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR GCA 72 bp | ATTTCTTCTTGTTGCCATTACCACCTGCTGGAGCCTTaGCATCTCGTTTGCCAGCGGCATTGGTCAGCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: ISSCCHYHLLEP*HLVCQRHWSAW Trigger: CCACGCTGACCAATGCCGCTGGCAAACGAGATGGCAAGGCTCCAGCAGGTGGTAATGGCAACAAGAAGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR CCA 72 bp | TGTGAAATAGCGACTCACGAGCCCAGTTTCCGCTCCTaGTTCCAAGAGAAAGAAGGAAAGGCGGGCATTGGG | + |
|
Preference number: 3 (lower is better) Translates to: CEIATHEPSFRS*FQEKEGKAGIG Trigger: CCCAATGCCCGCCTTTCCTTCTTTCTCTTGGAACCAGGAGCGGAAACTGGGCTCGTGAGTCGCTATTTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR CCA 72 bp | GAGACTCCTCAGTTACTGACACAGTCAGGGTGGCGGTaGTGGAGAGCAAAGGTTCTCCACTGTCTGAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: ETPQLLTQSGWR*WRAKVLHCLRS Trigger: TGATCTCAGACAGTGGAGAACCTTTGCTCTCCACCACCGCCACCCTGACTGTGTCAGTAACTGAGGAGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR CCA 72 bp | CTTGCCCGATTTCTTCTTGTTGCCATTACCACCTGCTaGAGCCTTGCCATCTCGTTTGCCAGCGGCATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LARFLLVAITTC*SLAISFASGIG Trigger: ACCAATGCCGCTGGCAAACGAGATGGCAAGGCTCCAGCAGGTGGTAATGGCAACAAGAAGAAATCGGGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR GCA 72 bp | GGTTCTCCACTGTCTGAGATCAAGACTGTGAGAATCTaGCTTGGTGAATCTGTGTCCTGGATTGGGCGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GSPLSEIKTVRI*LGESVSWIGRA Trigger: TGCCCGCCCAATCCAGGACACAGATTCACCAAGGCAGATTCTCACAGTCTTGATCTCAGACAGTGGAGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR GCA 72 bp | GCAGCATCTCTGTATCAAACTGGTTGTTGGGCCAGGTaGCAGTTTCATCACCATTTTGGGATCCGCTCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: AASLYQTGCWAR*QFHHHFGIRSC Trigger: GCACGAGCGGATCCCAAAATGGTGATGAAACTGGCACCTGGCCCAACAACCAGTTTGATACAGAGATGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR CCA 72 bp | ACTCCTCAGTTACTGACACAGTCAGGGTGGCGGTGGTaGAGAGCAAAGGTTCTCCACTGTCTGAGATCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TPQLLTQSGWRW*RAKVLHCLRSR Trigger: TCTTGATCTCAGACAGTGGAGAACCTTTGCTCTCCACCACCGCCACCCTGACTGTGTCAGTAACTGAGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR CCA 72 bp | TCCCATCAGCAGCTTCGCTGGCAGAGGCCAAGATCATaGCTTGCAGCATCTCTGTATCAAACTGGTTGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SHQQLRWQRPRS*LAASLYQTGCW Trigger: CCAACAACCAGTTTGATACAGAGATGCTGCAAGCCATGATCTTGGCCTCTGCCAGCGAAGCTGCTGATGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR GCA 72 bp | TTTCTTGCCCGATTTCTTCTTGTTGCCATTACCACCTaGTGGAGCCTTGCCATCTCGTTTGCCAGCGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: FLARFLLVAITT*WSLAISFASGI Trigger: AATGCCGCTGGCAAACGAGATGGCAAGGCTCCAGCAGGTGGTAATGGCAACAAGAAGAAATCGGGCAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGCACGTGTTTCTGTTTCCCAACGGGGAGCATGGCCCTGGCTCCTACCAGTGTAGTCAAGACTCCATaGTCACGATTTATTGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LGTCFCFPTGSMALAPTSVVKTP*SRFIVK Trigger: TTTCACAATAAATCGTGACAATGGAGTCTTGACTAC...ACTGGTAGGAGCCAGGGCCATGCTCCCCGTTGGGAAACAGAAACACGTGCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCCCCTGGGTACATACAGAGCCCCTTGCAAGACCCTATTAACAGGCTGTTTTGTATCAAACTGGTTGTaGGGCCAGGTGCCAGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SPLGTYRAPCKTLLTGCFVSNWL*GQVPVS Trigger: TGAAACTGGCACCTGGCCCAACAACCAGTTTGATAC...AAAACAGCCTGTTAATAGGGTCTTGCAAGGGGCTCTGTATGTACCCAGGGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| 3UTR CCA 72 bp | GCCAAGATCATGGCTTGCAGCATCTCTGTATCAAACTaGTTGTTGGGCCAGGTGCCAGTTTCATCACCATTT | + |
|
Preference number: 3 (lower is better) Translates to: AKIMACSISVSN*LLGQVPVSSPF Trigger: AAATGGTGATGAAACTGGCACCTGGCCCAACAACCAGTTTGATACAGAGATGCTGCAAGCCATGATCTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
||
| CDS-3UTR TCA 90 bp | CGCCGCAGCGTGTGGACACAGCACAAAACACAGCACGGGCCGCGCAGGCAGATTCCACCACTTCCGCGCTaGACAGCTCCAGCGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRSVWTQHKTQHGPRRQIPPLPR*TAPAGS Trigger: AGAACCCGCTGGAGCTGTTCAGCGCGGAAGTGGTGG...AATCTGCCTGCGCGGCCCGTGCTGTGTTTTGTGCTGTGTCCACACGCTGCGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR GCA 90 bp | GTTGGCTTGGGCACGTGTTTCTGTTTCCCAACGGGGAGCATGGCCCTGGCTCCTGGCTTACCAGTCCGCTaGTCCGGGCCTCTGCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: VGLGTCFCFPTGSMALAPGLPVR*SGPLRP Trigger: TGGTCGCAGAGGCCCGGAGCAGCGGACTGGTAAGCC...AGGAGCCAGGGCCATGCTCCCCGTTGGGAAACAGAAACACGTGCCCAAGCCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076807.7 ENSMUST00000192103.2 |
||
| CDS-3UTR GCA 90 bp | GGGCGGCAGGAGATGGATAAGCCTGCCTGGGTTGGAAGATGGAGGAGTTCAGCTTCCTCGCACCGCGTCTaGGTGCAAGGAGGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRQEMDKPAWVGRWRSSASSHRV*VQGGPW Trigger: CCAGGGCCCTCCTTGCACGCAGACGCGGTGCGAGGA...AGCTGAACTCCTCCATCTTCCAACCCAGGCAGGCTTATCCATCTCCTGCCGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR CCA 90 bp | CGCCGCAGCGTGTGGACACAGCACAAAACACAGCACGGGCCGCGCAGGCAGATTAACGCCAGTCAGTGTTaGGCGGGGCTTGCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRSVWTQHKTQHGPRRQINASQC*AGLAVQ Trigger: CTGGACAGCAAGCCCCGCCCAACACTGACTGGCGTT...AATCTGCCTGCGCGGCCCGTGCTGTGTTTTGTGCTGTGTCCACACGCTGCGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR GCA 90 bp | CGCCGCAGCGTGTGGACACAGCACAAAACACAGCACGGGCCGCGCAGGCAGATTCTCATCCAGGTCAGTTaGAAGAACCTGGGCGACGCG | + |
|
Preference number: 4 (lower is better) Translates to: RRSVWTQHKTQHGPRRQILIQVS*KNLGDA Trigger: CGCGTCGCCCAGGTTCTTGCAACTGACCTGGATGAG...AATCTGCCTGCGCGGCCCGTGCTGTGTTTTGTGCTGTGTCCACACGCTGCGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCTAAGACCACTGGTCCTCCCACCAAGGGCACCTCTGGAGTACCCAGCACTTCGCAGCGTGTTCTaGCGGCTGGCCAGTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLLRPLVLPPRAPLEYPALRSVF*RLASGL Trigger: CAGCCCACTGGCCAGCCGCCAGAACACGCTGCGAAG...TGCTGGGTACTCCAGAGGTGCCCTTGGTGGGAGGACCAGTGGTCTTAGCAGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR TCA 90 bp | GGGCGGCAGGAGATGGATAAGCCTGCCTGGGTTGGAAGATGGAGGAGTTCAGCTTTGGGCGGGCAGTGCTaGTCTGACCCGTGTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRQEMDKPAWVGRWRSSALGGQC*SDPCEA Trigger: GGCTTCACACGGGTCAGATCAGCACTGCCCGCCCAA...AGCTGAACTCCTCCATCTTCCAACCCAGGCAGGCTTATCCATCTCCTGCCGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR GCA 90 bp | GAAGACTGGTACCAAACCATGCTTTGGGGGAAAGCTGAACTGAAGGAGAGGCCACCTGGGCGACGCGCGTaGCTGGGGGTGCATCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EDWYQTMLWGKAELKERPPGRRA*LGVHPP Trigger: GGGAGGATGCACCCCCAGGCACGCGCGTCGCCCAGG...TGGCCTCTCCTTCAGTTCAGCTTTCCCCCAAAGCATGGTTTGGTACCAGTCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR CCA 90 bp | CGCCGCAGCGTGTGGACACAGCACAAAACACAGCACGGGCCGCGCAGGCAGATTCACTGTGATACGAATTaGAAGGGTGGCGGAGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRSVWTQHKTQHGPRRQIHCDTN*KGGGAS Trigger: GCTCGCTCCGCCACCCTTCCAATTCGTATCACAGTG...AATCTGCCTGCGCGGCCCGTGCTGTGTTTTGTGCTGTGTCCACACGCTGCGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGAACCAGAATGGAGGGGTCTGGCCTGGTGTTTGTCTATGGCTAGAATGAGGAAAGGCGGGCATTaGGCGGGGCGTCGGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QAEPEWRGLAWCLSMARMRKGGH*AGRRGP Trigger: GGGACCCCGACGCCCCGCCCAATGCCCGCCTTTCCT...CATTCTAGCCATAGACAAACACCAGGCCAGACCCCTCCATTCTGGTTCAGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR CCA 90 bp | GTTGGCTTGGGCACGTGTTTCTGTTTCCCAACGGGGAGCATGGCCCTGGCTCCTAGGCTTCTTCAGCAGTaGGTCGCTGCGGCGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGLGTCFCFPTGSMALAPRLLQQ*VAAARV Trigger: GACTCTCGCCGCAGCGACCCACTGCTGAAGAAGCCT...AGGAGCCAGGGCCATGCTCCCCGTTGGGAAACAGAAACACGTGCCCAAGCCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR TCA 90 bp | CGCCGCAGCGTGTGGACACAGCACAAAACACAGCACGGGCCGCGCAGGCAGATTAAACGATTTCTCCGTTaGGGCCCTCATCCAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRSVWTQHKTQHGPRRQIKRFLR*GPHPGQ Trigger: CTGACCTGGATGAGGGCCTCAACGGAGAAATCGTTT...AATCTGCCTGCGCGGCCCGTGCTGTGTTTTGTGCTGTGTCCACACGCTGCGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR TCA 90 bp | CGCCGCAGCGTGTGGACACAGCACAAAACACAGCACGGGCCGCGCAGGCAGATTGAGGAGGATTGTCGTTaGTGTCGGACACTTGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: RRSVWTQHKTQHGPRRQIEEDCR*CRTLGP Trigger: AGGTCCAAGTGTCCGACATCAACGACAATCCTCCTC...AATCTGCCTGCGCGGCCCGTGCTGTGTTTTGTGCTGTGTCCACACGCTGCGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR TCA 90 bp | CGCCGCAGCGTGTGGACACAGCACAAAACACAGCACGGGCCGCGCAGGCAGATTTCACTCCCAACACTGTaGCTGCGAATCCCACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRSVWTQHKTQHGPRRQISLPTL*LRIPQR Trigger: TCTCTGTGGGATTCGCAGTCACAGTGTTGGGAGTGA...AATCTGCCTGCGCGGCCCGTGCTGTGTTTTGTGCTGTGTCCACACGCTGCGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR GCA 90 bp | GGGCGGCAGGAGATGGATAAGCCTGCCTGGGTTGGAAGATGGAGGAGTTCAGCTATTGTGCCCTGCATCTaGGTCCCAGCCTACCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: GRQEMDKPAWVGRWRSSAIVPCI*VPAYHP Trigger: CGGGTGGTAGGCTGGGACGCAGATGCAGGGCACAAT...AGCTGAACTCCTCCATCTTCCAACCCAGGCAGGCTTATCCATCTCCTGCCGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCAGAACTCTCTTTGCATATTCAACTCCCTAGGGTATAGAGAGGGGGTGGGCGACGCGCGTGCCTaGGGGTGCATCCTCCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SQQNSLCIFNSLGYREGVGDARA*GCILPD Trigger: GTCCGGGAGGATGCACCCCCAGGCACGCGCGTCGCC...CACCCCCTCTCTATACCCTAGGGAGTTGAATATGCAAAGAGAGTTCTGCTGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR TCA 90 bp | GGGCGGCAGGAGATGGATAAGCCTGCCTGGGTTGGAAGATGGAGGAGTTCAGCTGGCGAGAGTCCGTGGTaGGGTACACCTGATGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GRQEMDKPAWVGRWRSSAGESPW*GTPDGT Trigger: TGTACCATCAGGTGTACCTCACCACGGACTCTCGCC...AGCTGAACTCCTCCATCTTCCAACCCAGGCAGGCTTATCCATCTCCTGCCGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR GCA 90 bp | GGAGCTCACTGGAGCTCGGTAGAGGTCCCTAGACCGCTTCCACTTGTAAACTTTGGCTTACCAGTCCGCTaGTCCGGGCCTCTGCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: GAHWSSVEVPRPLPLVNFGLPVR*SGPLRP Trigger: TGGTCGCAGAGGCCCGGAGCAGCGGACTGGTAAGCC...AAAGTTTACAAGTGGAAGCGGTCTAGGGACCTCTACCGAGCTCCAGTGAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| CDS-3UTR GCA 90 bp | TTCCTGCTAAGACCACTGGTCCTCCCACCAAGGGCACCTCTGGAGTACCCAGCAGGCGGGCCGACAGACTaGCGAGATCCAAACCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLRPLVLPPRAPLEYPAGGPTD*RDPNQD Trigger: ATCTTGGTTTGGATCTCGGCAGTCTGTCGGCCCGCC...TGCTGGGTACTCCAGAGGTGCCCTTGGTGGGAGGACCAGTGGTCTTAGCAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076807.7 ENSMUST00000192103.2 |
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| CDS-3UTR GCA 90 bp | GCGAGAGATATCGGAAGGGGGATGGGCAGGAGCTACGTGACTATGCGAAGAGAACCCACATCGGGATCGTaGGCGCTCTCGAGCGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARDIGRGMGRSYVTMRREPTSGS*ALSSGK Trigger: CTTTCCGCTCGAGAGCGCGCACGATCCCGATGTGGG...TTCTCTTCGCATAGTCACGTAGCTCCTGCCCATCCCCCTTCCGATATCTCTCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CCA 90 bp | TTCCTGCTAAGACCACTGGTCCTCCCACCAAGGGCACCTCTGGAGTACCCAGCAGCGGTCAGTACCAACTaGACACTTGGCTCCCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLRPLVLPPRAPLEYPAAVSTN*TLGSRS Trigger: GGAACGGGAGCCAAGTGTCCAGTTGGTACTGACCGC...TGCTGGGTACTCCAGAGGTGCCCTTGGTGGGAGGACCAGTGGTCTTAGCAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CCA 90 bp | TTGGGCACGTGTTTCTGTTTCCCAACGGGGAGCATGGCCCTGGCTCCTACCAGTTACGAATTGGAAGGGTaGCGGAGCGAGCTGGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGTCFCFPTGSMALAPTSYELEG*RSELGF Trigger: GAACCCCAGCTCGCTCCGCCACCCTTCCAATTCGTA...ACTGGTAGGAGCCAGGGCCATGCTCCCCGTTGGGAAACAGAAACACGTGCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CCA 90 bp | TTGGGCACGTGTTTCTGTTTCCCAACGGGGAGCATGGCCCTGGCTCCTACCAGTAAAGGGGAGACCGGGTaGAACCTCGCAGGTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGTCFCFPTGSMALAPTSKGETG*NLAGHQ Trigger: TTGGTGACCTGCGAGGTTCCACCCGGTCTCCCCTTT...ACTGGTAGGAGCCAGGGCCATGCTCCCCGTTGGGAAACAGAAACACGTGCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR TCA 90 bp | GTTGGCTTGGGCACGTGTTTCTGTTTCCCAACGGGGAGCATGGCCCTGGCTCCTGGTCCAGTCGATCGTTaGCGAACATCTCTCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGLGTCFCFPTGSMALAPGPVDR*RTSLQS Trigger: AGACTGGAGAGATGTTCGTCAACGATCGACTGGACC...AGGAGCCAGGGCCATGCTCCCCGTTGGGAAACAGAAACACGTGCCCAAGCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR TCA 90 bp | GGGCGGCAGGAGATGGATAAGCCTGCCTGGGTTGGAAGATGGAGGAGTTCAGCTTCGCGTCCAGCACTGTaGTACGAATTGGAAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRQEMDKPAWVGRWRSSASRPAL*YELEGW Trigger: CCACCCTTCCAATTCGTATCACAGTGCTGGACGCGA...AGCTGAACTCCTCCATCTTCCAACCCAGGCAGGCTTATCCATCTCCTGCCGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR GCA 90 bp | CGCCGCAGCGTGTGGACACAGCACAAAACACAGCACGGGCCGCGCAGGCAGATTCTCACGATCCAGGGCTaGACTGGTTTTCAAAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRSVWTQHKTQHGPRRQILTIQG*TGFQSE Trigger: TTCACTTTGAAAACCAGTGCAGCCCTGGATCGTGAG...AATCTGCCTGCGCGGCCCGTGCTGTGTTTTGTGCTGTGTCCACACGCTGCGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR TCA 90 bp | CGCCGCAGCGTGTGGACACAGCACAAAACACAGCACGGGCCGCGCAGGCAGATTTGTCACGATTTATTGTaGAATAGCGACTCACGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRSVWTQHKTQHGPRRQICHDLL*NSDSRA Trigger: GGCTCGTGAGTCGCTATTTCACAATAAATCGTGACA...AATCTGCCTGCGCGGCCCGTGCTGTGTTTTGTGCTGTGTCCACACGCTGCGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR TCA 90 bp | GCAAGCATCATCAGTACCAGAGGGAGGGTGCCTGTTCCCCCAAAACTTAAGCATCTGTTCTCGGGGAGCTaGGCCAGAAGGGAACTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASIISTRGRVPVPPKLKHLFSGS*ARRELG Trigger: GCCGAGTTCCCTTCTGGCTCAGCTCCCCGAGAACAG...ATGCTTAAGTTTTGGGGGAACAGGCACCCTCCCTCTGGTACTGATGATGCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CCA 90 bp | GCGAGAGATATCGGAAGGGGGATGGGCAGGAGCTACGTGACTATGCGAAGAGAAGGTGAATCTGTGTCCTaGATTGGGCGGGCAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARDIGRGMGRSYVTMRREGESVS*IGRAVL Trigger: CAGCACTGCCCGCCCAATCCAGGACACAGATTCACC...TTCTCTTCGCATAGTCACGTAGCTCCTGCCCATCCCCCTTCCGATATCTCTCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR GCA 90 bp | GTTGGCTTGGGCACGTGTTTCTGTTTCCCAACGGGGAGCATGGCCCTGGCTCCTCAGCACGATTGTGGCTaGCGAAGGAGTAAACGATTT | + |
|
Preference number: 4 (lower is better) Translates to: VGLGTCFCFPTGSMALAPQHDCG*RRSKRF Trigger: AAATCGTTTACTCCTTCGGCAGCCACAATCGTGCTG...AGGAGCCAGGGCCATGCTCCCCGTTGGGAAACAGAAACACGTGCCCAAGCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR GCA 90 bp | TTCCTGCTAAGACCACTGGTCCTCCCACCAAGGGCACCTCTGGAGTACCCAGCATCCCAACACTGTGACTaGGAATCCCACAGAGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLLRPLVLPPRAPLEYPASQHCD*ESHRDQ Trigger: TTGGTCTCTGTGGGATTCGCAGTCACAGTGTTGGGA...TGCTGGGTACTCCAGAGGTGCCCTTGGTGGGAGGACCAGTGGTCTTAGCAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CCA 90 bp | CAGGCTGAACCAGAATGGAGGGGTCTGGCCTGGTGTTTGTCTATGGCTAGAATGCTGACACAGTCAGGGTaGCGGTGGTGGAGAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QAEPEWRGLAWCLSMARMLTQSG*RWWRAK Trigger: CTTTGCTCTCCACCACCGCCACCCTGACTGTGTCAG...CATTCTAGCCATAGACAAACACCAGGCCAGACCCCTCCATTCTGGTTCAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR TCA 90 bp | TTCCTGCTAAGACCACTGGTCCTCCCACCAAGGGCACCTCTGGAGTACCCAGCAGGATCTCATAGTGAATaGTGGTGGAAGCCTCGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FLLRPLVLPPRAPLEYPAGSHSE*WWKPRL Trigger: TAACCGAGGCTTCCACCATCATTCACTATGAGATCC...TGCTGGGTACTCCAGAGGTGCCCTTGGTGGGAGGACCAGTGGTCTTAGCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076807.7 ENSMUST00000192103.2 |
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| CDS-3UTR TCA 90 bp | GCGAGAGATATCGGAAGGGGGATGGGCAGGAGCTACGTGACTATGCGAAGAGAAGCCCGATACAAAGACTaGTTGAAGGCAGGCGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: ARDIGRGMGRSYVTMRREARYKD*LKAGAL Trigger: CAATGCGCCTGCCTTCAATCAGTCTTTGTATCGGGC...TTCTCTTCGCATAGTCACGTAGCTCCTGCCCATCCCCCTTCCGATATCTCTCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR GCA 90 bp | GAAGACTGGTACCAAACCATGCTTTGGGGGAAAGCTGAACTGAAGGAGAGGCCAGGCGGGCCGACAGACTaGCGAGATCCAAACCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EDWYQTMLWGKAELKERPGGPTD*RDPNQD Trigger: ATCTTGGTTTGGATCTCGGCAGTCTGTCGGCCCGCC...TGGCCTCTCCTTCAGTTCAGCTTTCCCCCAAAGCATGGTTTGGTACCAGTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076807.7 ENSMUST00000192103.2 |
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| CDS-3UTR GCA 90 bp | AGTCCCCTGGGTACATACAGAGCCCCTTGCAAGACCCTATTAACAGGCTGTTTTACTCCAGAGTTACAGTaGAGGAGGGCAGCGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLGTYRAPCKTLLTGCFTPELQ*RRAASR Trigger: GCGGGACGCTGCCCTCCTGCACTGTAACTCTGGAGT...AAAACAGCCTGTTAATAGGGTCTTGCAAGGGGCTCTGTATGTACCCAGGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CCA 90 bp | GAAGACTGGTACCAAACCATGCTTTGGGGGAAAGCTGAACTGAAGGAGAGGCCACAGTCAGGGTGGCGGTaGTGGAGAGCAAAGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EDWYQTMLWGKAELKERPQSGWR*WRAKVL Trigger: GAGAACCTTTGCTCTCCACCACCGCCACCCTGACTG...TGGCCTCTCCTTCAGTTCAGCTTTCCCCCAAAGCATGGTTTGGTACCAGTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR TCA 90 bp | GCGAGAGATATCGGAAGGGGGATGGGCAGGAGCTACGTGACTATGCGAAGAGAAGAGAATCTGCCTTGGTaGATCTGTGTCCTGGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARDIGRGMGRSYVTMRREENLPW*ICVLDW Trigger: CCAATCCAGGACACAGATTCACCAAGGCAGATTCTC...TTCTCTTCGCATAGTCACGTAGCTCCTGCCCATCCCCCTTCCGATATCTCTCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR GCA 90 bp | TTCCTGCTAAGACCACTGGTCCTCCCACCAAGGGCACCTCTGGAGTACCCAGCAAAGACTGTGAGAATCTaGCTTGGTGAATCTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLRPLVLPPRAPLEYPAKTVRI*LGESVS Trigger: GGACACAGATTCACCAAGGCAGATTCTCACAGTCTT...TGCTGGGTACTCCAGAGGTGCCCTTGGTGGGAGGACCAGTGGTCTTAGCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CCA 90 bp | TGCCCCACTCCCAGCAGTATACACTCTCAACTTCCCTTTAGTTTACCACCCCCTTTGTCGTTGATGTCCTaGACCACCACTTCCGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPTPSSIHSQLPFSLPPPLSLMS*TTTSAL Trigger: CAGCGCGGAAGTGGTGGTCCAGGACATCAACGACAA...AGGGGGTGGTAAACTAAAGGGAAGTTGAGAGTGTATACTGCTGGGAGTGGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CCA 90 bp | GGGCGGCAGGAGATGGATAAGCCTGCCTGGGTTGGAAGATGGAGGAGTTCAGCTAAATCTCATGGAGTTTaGTGTCTTCGAAGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRQEMDKPAWVGRWRSSAKSHGV*CLRSPG Trigger: GCCTGGACTTCGAAGACACCAAACTCCATGAGATTT...AGCTGAACTCCTCCATCTTCCAACCCAGGCAGGCTTATCCATCTCCTGCCGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CCA 90 bp | GCAAGCATCATCAGTACCAGAGGGAGGGTGCCTGTTCCCCCAAAACTTAAGCATCAAAAAGGCTCTGGTTaGGGGCTCCCAAGAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASIISTRGRVPVPPKLKHQKGSG*GLPRGC Trigger: ACAGCCTCTTGGGAGCCCCCAACCAGAGCCTTTTTG...ATGCTTAAGTTTTGGGGGAACAGGCACCCTCCCTCTGGTACTGATGATGCTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| 3UTR CAA 72 bp | ATCAGCAGCTTCGCTGGCAGAGGCCAAGATCATGGCTaGCAGCATCTCTGTATCAAACTGGTTGTTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISSFAGRGQDHG*QHLCIKLVVGP Trigger: TGGCCCAACAACCAGTTTGATACAGAGATGCTGCAAGCCATGATCTTGGCCTCTGCCAGCGAAGCTGCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| CDS-3UTR CCA 90 bp | ACACTATACTATTGGCTATTCTACACCAGCGGGGGAGGGGGATCTTCTACACTAACGGCAAAAAGGCTCTaGTTGGGGGCTCCCAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLYYWLFYTSGGGGSSTLTAKRL*LGAPKR Trigger: CCTCTTGGGAGCCCCCAACCAGAGCCTTTTTGCCGT...TAGTGTAGAAGATCCCCCTCCCCCGCTGGTGTAGAATAGCCAATAGTATAGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CCA 90 bp | AGTCCCCTGGGTACATACAGAGCCCCTTGCAAGACCCTATTAACAGGCTGTTTTATCTGTGTCCTGGATTaGGCGGGCAGTGCTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPLGTYRAPCKTLLTGCFICVLD*AGSADL Trigger: CAGATCAGCACTGCCCGCCCAATCCAGGACACAGAT...AAAACAGCCTGTTAATAGGGTCTTGCAAGGGGCTCTGTATGTACCCAGGGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR TCA 90 bp | AGTCCCCTGGGTACATACAGAGCCCCTTGCAAGACCCTATTAACAGGCTGTTTTCAAATACGTTCACGCTaGTGTTGGTGGCTAAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SPLGTYRAPCKTLLTGCFQIRSR*CWWLRL Trigger: CAGTCTTAGCCACCAACATCAGCGTGAACGTATTTG...AAAACAGCCTGTTAATAGGGTCTTGCAAGGGGCTCTGTATGTACCCAGGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR GCA 90 bp | TCCCAGCAGAACTCTCTTTGCATATTCAACTCCCTAGGGTATAGAGAGGGGGTGAGGTTTGTAAAGAGTTaGTCCCCACATCGGGATCGT | + |
|
Preference number: 4 (lower is better) Translates to: SQQNSLCIFNSLGYREGVRFVKS*SPHRDR Trigger: ACGATCCCGATGTGGGGAGCAACTCTTTACAAACCT...CACCCCCTCTCTATACCCTAGGGAGTTGAATATGCAAAGAGAGTTCTGCTGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR GCA 90 bp | AGTCCCCTGGGTACATACAGAGCCCCTTGCAAGACCCTATTAACAGGCTGTTTTACAAGTACTTTGCAATaGGCTCCTTCGGGATTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLGTYRAPCKTLLTGCFTSTLQ*APSGLA Trigger: TGCCAATCCCGAAGGAGCGCATTGCAAAGTACTTGT...AAAACAGCCTGTTAATAGGGTCTTGCAAGGGGCTCTGTATGTACCCAGGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR TCA 90 bp | AGTCCCCTGGGTACATACAGAGCCCCTTGCAAGACCCTATTAACAGGCTGTTTTGATACAAAGACTGATTaGAGGCAGGCGCATTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLGTYRAPCKTLLTGCFDTKTD*RQAHCH Trigger: ATGACAATGCGCCTGCCTTCAATCAGTCTTTGTATC...AAAACAGCCTGTTAATAGGGTCTTGCAAGGGGCTCTGTATGTACCCAGGGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR GCA 90 bp | ACACTATACTATTGGCTATTCTACACCAGCGGGGGAGGGGGATCTTCTACACTACCTCTACAAGTACTTTaGAATGCGCTCCTTCGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLYYWLFYTSGGGGSSTLPLQVL*NALLRD Trigger: ATCCCGAAGGAGCGCATTGCAAAGTACTTGTAGAGG...TAGTGTAGAAGATCCCCCTCCCCCGCTGGTGTAGAATAGCCAATAGTATAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CCA 90 bp | GCAAGCATCATCAGTACCAGAGGGAGGGTGCCTGTTCCCCCAAAACTTAAGCATTTGATGTCGGACACTTaGACCTTCACTGTTGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASIISTRGRVPVPPKLKHLMSDT*TFTVVR Trigger: TCTTACAACAGTGAAGGTCCAAGTGTCCGACATCAA...ATGCTTAAGTTTTGGGGGAACAGGCACCCTCCCTCTGGTACTGATGATGCTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR TCA 90 bp | ACACTATACTATTGGCTATTCTACACCAGCGGGGGAGGGGGATCTTCTACACTACTGAGATCAAGACTGTaGGAATCTGCCTTGGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TLYYWLFYTSGGGGSSTLLRSRL*ESALVN Trigger: ATTCACCAAGGCAGATTCTCACAGTCTTGATCTCAG...TAGTGTAGAAGATCCCCCTCCCCCGCTGGTGTAGAATAGCCAATAGTATAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| 3UTR CAA 72 bp | TCATTGCGGTCAGTAACAAATACGTTCACGCTGATGTaGGTGGCTAAGACTGGGGTACCTCCGTCGTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: SLRSVTNTFTLM*VAKTGVPPSFI Trigger: TATAAACGACGGAGGTACCCCAGTCTTAGCCACCAACATCAGCGTGAACGTATTTGTTACTGACCGCAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR CAA 72 bp | ATCATGGCTTGCAGCATCTCTGTATCAAACTGGTTGTaGGGCCAGGTGCCAGTTTCATCACCATTTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IMACSISVSNWL*GQVPVSSPFWD Trigger: ATCCCAAAATGGTGATGAAACTGGCACCTGGCCCAACAACCAGTTTGATACAGAGATGCTGCAAGCCATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| 3UTR CAA 72 bp | AAGATCATGGCTTGCAGCATCTCTGTATCAAACTGGTaGTTGGGCCAGGTGCCAGTTTCATCACCATTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KIMACSISVSNW*LGQVPVSSPFW Trigger: CCAAAATGGTGATGAAACTGGCACCTGGCCCAACAACCAGTTTGATACAGAGATGCTGCAAGCCATGATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192103.2 |
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| CDS CCA 90 bp | ACGATTTCTCCGTTGAGGCCCTCATCCAGGTCAGTTGCAAGAACCTaGGCGACGCGCGTGCCTGGGGGTGCATCCTCCCGGACGCGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TISPLRPSSRSVART*ATRVPGGASSRTRA Trigger: GGCGCGCGTCCGGGAGGATGCACCCCCAGGCACGCGCGTCGCCCAGGTTCTTGCAACTGACCTGGATGAGGGCCTCAACGGAGAAATCGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS TCA 90 bp | GGAGCCGGCGGGCCGACAGACTGCCGAGATCCAAACCAAGATCCGTaGCCACGTTACCCACGGGGAACCCCCTCTCTCTCTCCTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GAGGPTDCRDPNQDP*PRYPRGTPSLSPPG Trigger: TCCTGGAGGAGAGAGAGAGGGGGTTCCCCGTGGGTAACGTGGTCACGGATCTTGGTTTGGATCTCGGCAGTCTGTCGGCCCGCCGGCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076807.7 ENSMUST00000192103.2 |
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| CDS CCA 90 bp | GCCCTCATCCAGGTCAGTTGCAAGAACCTGGGCGACGCGCGTGCCTaGGGGTGCATCCTCCCGGACGCGCGCCCGATACAAAGACTGATT | + |
|
Preference number: 5 (lower is better) Translates to: ALIQVSCKNLGDARA*GCILPDARPIQRLI Trigger: AATCAGTCTTTGTATCGGGCGCGCGTCCGGGAGGATGCACCCCCAGGCACGCGCGTCGCCCAGGTTCTTGCAACTGACCTGGATGAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS GCA 90 bp | ATCCAGGTCAGTTGCAAGAACCTGGGCGACGCGCGTGCCTGGGGGTaGATCCTCCCGGACGCGCGCCCGATACAAAGACTGATTGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IQVSCKNLGDARAWG*ILPDARPIQRLIEG Trigger: GCCTTCAATCAGTCTTTGTATCGGGCGCGCGTCCGGGAGGATGCACCCCCAGGCACGCGCGTCGCCCAGGTTCTTGCAACTGACCTGGAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS GCA 90 bp | GAAGGAGTAAACGATTTCTCCGTTGAGGCCCTCATCCAGGTCAGTTaGAAGAACCTGGGCGACGCGCGTGCCTGGGGGTGCATCCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: EGVNDFSVEALIQVS*KNLGDARAWGCILP Trigger: CGGGAGGATGCACCCCCAGGCACGCGCGTCGCCCAGGTTCTTGCAACTGACCTGGATGAGGGCCTCAACGGAGAAATCGTTTACTCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS CCA 90 bp | CGCGTCCAGCACTGTGATACGAATTGGAAGGGTGGCGGAGCGAGCTaGGGTTCCTCCATCCAGCGCGGTCAGTACCAACTGGACACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RVQHCDTNWKGGGAS*GSSIQRGQYQLDTW Trigger: CCAAGTGTCCAGTTGGTACTGACCGCGCTGGATGGAGGAACCCCAGCTCGCTCCGCCACCCTTCCAATTCGTATCACAGTGCTGGACGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS TCA 90 bp | CCCCAGCACGATTGTGGCTGCCGAAGGAGTAAACGATTTCTCCGTTaGGGCCCTCATCCAGGTCAGTTGCAAGAACCTGGGCGACGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PQHDCGCRRSKRFLR*GPHPGQLQEPGRRA Trigger: CGCGCGTCGCCCAGGTTCTTGCAACTGACCTGGATGAGGGCCTCAACGGAGAAATCGTTTACTCCTTCGGCAGCCACAATCGTGCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS-3UTR CAA 90 bp | CGCCGCAGCGTGTGGACACAGCACAAAACACAGCACGGGCCGCGCAGGCAGATTACCTCTACAAGTACTTaGCAATGCGCTCCTTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RRSVWTQHKTQHGPRRQITSTST*QCAPSG Trigger: TCCCGAAGGAGCGCATTGCAAAGTACTTGTAGAGGT...AATCTGCCTGCGCGGCCCGTGCTGTGTTTTGTGCTGTGTCCACACGCTGCGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
||
| CDS TCA 90 bp | AGGAGGGCAGCGTCCCGCACAGCTCCTCTCGGTCCAGTCGATCGTTaGCGAACATCTCTCCAGTCTCCCAGTTCACCTCAAAGAACCTAC | + |
|
Preference number: 5 (lower is better) Translates to: RRAASRTAPLGPVDR*RTSLQSPSSPQRTY Trigger: GTAGGTTCTTTGAGGTGAACTGGGAGACTGGAGAGATGTTCGTCAACGATCGACTGGACCGAGAGGAGCTGTGCGGGACGCTGCCCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CAA 90 bp | GCGAGAGATATCGGAAGGGGGATGGGCAGGAGCTACGTGACTATGCGAAGAGAACCTCATCCAGGTCAGTaGCAAGAACCTGGGCGACGC | + |
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Preference number: 5 (lower is better) Translates to: ARDIGRGMGRSYVTMRREPHPGQ*QEPGRR Trigger: GCGTCGCCCAGGTTCTTGCAACTGACCTGGATGAGG...TTCTCTTCGCATAGTCACGTAGCTCCTGCCCATCCCCCTTCCGATATCTCTCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS GCA 90 bp | GCGCAAAGTACTCATTGTGGCTCAGCTCATAGGTTTGTAAAGAGTTaGTCCCCACATCGGGATCGTGCGCGCTCTCGAGCGGAAAGCGCG | + |
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Preference number: 5 (lower is better) Translates to: AQSTHCGSAHRFVKS*SPHRDRARSRAESA Trigger: CGCGCTTTCCGCTCGAGAGCGCGCACGATCCCGATGTGGGGAGCAACTCTTTACAAACCTATGAGCTGAGCCACAATGAGTACTTTGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CAA 90 bp | GGGCGGCAGGAGATGGATAAGCCTGCCTGGGTTGGAAGATGGAGGAGTTCAGCTACGTTCACGCTGATGTaGGTGGCTAAGACTGGGGTA | + |
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Preference number: 5 (lower is better) Translates to: GRQEMDKPAWVGRWRSSATFTLM*VAKTGV Trigger: TACCCCAGTCTTAGCCACCAACATCAGCGTGAACGT...AGCTGAACTCCTCCATCTTCCAACCCAGGCAGGCTTATCCATCTCCTGCCGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CAA 90 bp | CAGGCTGAACCAGAATGGAGGGGTCTGGCCTGGTGTTTGTCTATGGCTAGAATGGCAAAAAGGCTCTGGTaGGGGGCTCCCAAGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: QAEPEWRGLAWCLSMARMAKRLW*GAPKRL Trigger: CAGCCTCTTGGGAGCCCCCAACCAGAGCCTTTTTGC...CATTCTAGCCATAGACAAACACCAGGCCAGACCCCTCCATTCTGGTTCAGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CAA 90 bp | CAGGCTGAACCAGAATGGAGGGGTCTGGCCTGGTGTTTGTCTATGGCTAGAATGAAGTCCAGGCGACCCTaGATTGTCAGCACCCCGGTT | + |
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Preference number: 5 (lower is better) Translates to: QAEPEWRGLAWCLSMARMKSRRP*IVSTPV Trigger: AACCGGGGTGCTGACAATCAAGGGTCGCCTGGACTT...CATTCTAGCCATAGACAAACACCAGGCCAGACCCCTCCATTCTGGTTCAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CAA 90 bp | TGCCCCACTCCCAGCAGTATACACTCTCAACTTCCCTTTAGTTTACCACCCCCTAAACGCCAGTCAGTGTaGGGCGGGGCTTGCTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: CPTPSSIHSQLPFSLPPPKRQSV*GGACCP Trigger: TGGACAGCAAGCCCCGCCCAACACTGACTGGCGTTT...AGGGGGTGGTAAACTAAAGGGAAGTTGAGAGTGTATACTGCTGGGAGTGGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS CCA 90 bp | GAAGTAATTCTTGAGGGAAGAAGTCAGGCTAAAGGGGAGACCGGGTaGAACCTCGCAGGTCACCAACCCGTTCTCTCCAGCATCCAGATC | + |
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Preference number: 5 (lower is better) Translates to: EVILEGRSQAKGETG*NLAGHQPVLSSIQI Trigger: GATCTGGATGCTGGAGAGAACGGGTTGGTGACCTGCGAGGTTCCACCCGGTCTCCCCTTTAGCCTGACTTCTTCCCTCAAGAATTACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CAA 90 bp | TCCCAGCAGAACTCTCTTTGCATATTCAACTCCCTAGGGTATAGAGAGGGGGTGTTGAAGGCAGGCGCATaGTCATTCGCGTCCAGCACT | + |
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Preference number: 5 (lower is better) Translates to: SQQNSLCIFNSLGYREGVLKAGA*SFASST Trigger: AGTGCTGGACGCGAATGACAATGCGCCTGCCTTCAA...CACCCCCTCTCTATACCCTAGGGAGTTGAATATGCAAAGAGAGTTCTGCTGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS TCA 90 bp | TGTAAATCTCATGGAGTTTGGTGTCTTCGAAGTCCAGGCGACCCTTaGTTGTCAGCACCCCGGTTACGAGGTCTAAAGCGAATAGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: CKSHGVWCLRSPGDP*LSAPRLRGLKRIVP Trigger: GGGAACTATTCGCTTTAGACCTCGTAACCGGGGTGCTGACAATCAAGGGTCGCCTGGACTTCGAAGACACCAAACTCCATGAGATTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS TCA 90 bp | ATTGTCGTTGATGTCGGACACTTGGACCTTCACTGTTGTAAGAGCTaGGAGAGAGGGGATTCCCGAGTCTCGAGCTGTGATGCTGAGATT | + |
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Preference number: 5 (lower is better) Translates to: IVVDVGHLDLHCCKS*ERGDSRVSSCDAEI Trigger: AATCTCAGCATCACAGCTCGAGACTCGGGAATCCCCTCTCTCTCAGCTCTTACAACAGTGAAGGTCCAAGTGTCCGACATCAACGACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CAA 90 bp | ACACTATACTATTGGCTATTCTACACCAGCGGGGGAGGGGGATCTTCTACACTAGAGGGATTGTTGTCGTaGATGTCCTGGACCACCACT | + |
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Preference number: 5 (lower is better) Translates to: TLYYWLFYTSGGGGSSTLEGLLS*MSWTTT Trigger: AGTGGTGGTCCAGGACATCAACGACAACAATCCCTC...TAGTGTAGAAGATCCCCCTCCCCCGCTGGTGTAGAATAGCCAATAGTATAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CAA 90 bp | ACACTATACTATTGGCTATTCTACACCAGCGGGGGAGGGGGATCTTCTACACTAGTACCAACTGGACACTaGGCTCCCGTTCCCAATCTA | + |
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Preference number: 5 (lower is better) Translates to: TLYYWLFYTSGGGGSSTLVPTGH*APVPNL Trigger: TAGATTGGGAACGGGAGCCAAGTGTCCAGTTGGTAC...TAGTGTAGAAGATCCCCCTCCCCCGCTGGTGTAGAATAGCCAATAGTATAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CAA 90 bp | GAAGACTGGTACCAAACCATGCTTTGGGGGAAAGCTGAACTGAAGGAGAGGCCAGCTGTGATGCTGAGATaGTATTCTGGCATGGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: EDWYQTMLWGKAELKERPAVMLR*YSGMVS Trigger: TGAGACCATGCCAGAATACAATCTCAGCATCACAGC...TGGCCTCTCCTTCAGTTCAGCTTTCCCCCAAAGCATGGTTTGGTACCAGTCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS CCA 90 bp | CAAGTACTTTGCAATGCGCTCCTTCGGGATTGGCACCTTTGTCTTTaGCCTGGATGTAAATCTCATGGAGTTTGGTGTCTTCGAAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: QVLCNALLRDWHLCL*PGCKSHGVWCLRSP Trigger: TGGACTTCGAAGACACCAAACTCCATGAGATTTACATCCAGGCCAAAGACAAAGGTGCCAATCCCGAAGGAGCGCATTGCAAAGTACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CAA 90 bp | ACACTATACTATTGGCTATTCTACACCAGCGGGGGAGGGGGATCTTCTACACTAGTTGATGTCGGACACTaGGACCTTCACTGTTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: TLYYWLFYTSGGGGSSTLVDVGH*DLHCCK Trigger: CTTACAACAGTGAAGGTCCAAGTGTCCGACATCAAC...TAGTGTAGAAGATCCCCCTCCCCCGCTGGTGTAGAATAGCCAATAGTATAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS-3UTR CAA 90 bp | AGTCCCCTGGGTACATACAGAGCCCCTTGCAAGACCCTATTAACAGGCTGTTTTGTAGTCAAGACTCCATaGTCACGATTTATTGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: SPLGTYRAPCKTLLTGCFVVKTP*SRFIVK Trigger: TTTCACAATAAATCGTGACAATGGAGTCTTGACTAC...AAAACAGCCTGTTAATAGGGTCTTGCAAGGGGCTCTGTATGTACCCAGGGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS GCA 72 bp | CATCCAGGTCAGTTGCAAGAACCTGGGCGACGCGCGTaGCTGGGGGTGCATCCTCCCGGACGCGCGCCCGAT | + |
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Preference number: 6 (lower is better) Translates to: HPGQLQEPGRRA*LGVHPPGRAPD Trigger: ATCGGGCGCGCGTCCGGGAGGATGCACCCCCAGGCACGCGCGTCGCCCAGGTTCTTGCAACTGACCTGGATG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS CCA 72 bp | CAGGTCAGTTGCAAGAACCTGGGCGACGCGCGTGCCTaGGGGTGCATCCTCCCGGACGCGCGCCCGATACAA | + |
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Preference number: 6 (lower is better) Translates to: QVSCKNLGDARA*GCILPDARPIQ Trigger: TTGTATCGGGCGCGCGTCCGGGAGGATGCACCCCCAGGCACGCGCGTCGCCCAGGTTCTTGCAACTGACCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS GCA 72 bp | AGTTGCAAGAACCTGGGCGACGCGCGTGCCTGGGGGTaGATCCTCCCGGACGCGCGCCCGATACAAAGACTG | + |
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Preference number: 6 (lower is better) Translates to: SCKNLGDARAWG*ILPDARPIQRL Trigger: CAGTCTTTGTATCGGGCGCGCGTCCGGGAGGATGCACCCCCAGGCACGCGCGTCGCCCAGGTTCTTGCAACT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS CCA 72 bp | GCTGGGGTTCCTCCATCCAGCGCGGTCAGTACCAACTaGACACTTGGCTCCCGTTCCCAATCTAGGGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: AGVPPSSAVSTN*TLGSRSQSRAR Trigger: GCGCGCCCTAGATTGGGAACGGGAGCCAAGTGTCCAGTTGGTACTGACCGCGCTGGATGGAGGAACCCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS GCA 72 bp | AACGATTTCTCCGTTGAGGCCCTCATCCAGGTCAGTTaGAAGAACCTGGGCGACGCGCGTGCCTGGGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: NDFSVEALIQVS*KNLGDARAWGC Trigger: GCACCCCCAGGCACGCGCGTCGCCCAGGTTCTTGCAACTGACCTGGATGAGGGCCTCAACGGAGAAATCGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS TCA 72 bp | GGGCCGACAGACTGCCGAGATCCAAACCAAGATCCGTaGCCACGTTACCCACGGGGAACCCCCTCTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GPTDCRDPNQDP*PRYPRGTPSLS Trigger: AGAGAGAGAGGGGGTTCCCCGTGGGTAACGTGGTCACGGATCTTGGTTTGGATCTCGGCAGTCTGTCGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076807.7 ENSMUST00000192103.2 |
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| CDS TCA 72 bp | GGTGCATCCTCCCGGACGCGCGCCCGATACAAAGACTaGTTGAAGGCAGGCGCATTGTCATTCGCGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GASSRTRARYKD*LKAGALSFASS Trigger: GCTGGACGCGAATGACAATGCGCCTGCCTTCAATCAGTCTTTGTATCGGGCGCGCGTCCGGGAGGATGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS CAA 72 bp | TTCCTCCATCCAGCGCGGTCAGTACCAACTGGACACTaGGCTCCCGTTCCCAATCTAGGGCGCGCTCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: FLHPARSVPTGH*APVPNLGRAPG Trigger: TCCTGGAGCGCGCCCTAGATTGGGAACGGGAGCCAAGTGTCCAGTTGGTACTGACCGCGCTGGATGGAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS CAA 90 bp | CAGGAGGGCAGCGTCCCGCACAGCTCCTCTCGGTCCAGTCGATCGTaGACGAACATCTCTCCAGTCTCCCAGTTCACCTCAAAGAACCTA | + |
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Preference number: 6 (lower is better) Translates to: QEGSVPHSSSRSSRS*TNISPVSQFTSKNL Trigger: TAGGTTCTTTGAGGTGAACTGGGAGACTGGAGAGATGTTCGTCAACGATCGACTGGACCGAGAGGAGCTGTGCGGGACGCTGCCCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS GCA 72 bp | ACCAGCTCCGCATATTTCGTGCCGTCTTCTCGAGTCTaGACGCGGAGCGCAAAGTACTCATTGTGGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: TSSAYFVPSSRV*TRSAKYSLWLS Trigger: GCTGAGCCACAATGAGTACTTTGCGCTCCGCGTGCAGACTCGAGAAGACGGCACGAAATATGCGGAGCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS GCA 72 bp | ACTCATTGTGGCTCAGCTCATAGGTTTGTAAAGAGTTaGTCCCCACATCGGGATCGTGCGCGCTCTCGAGCG | + |
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Preference number: 6 (lower is better) Translates to: THCGSAHRFVKS*SPHRDRARSRA Trigger: CGCTCGAGAGCGCGCACGATCCCGATGTGGGGAGCAACTCTTTACAAACCTATGAGCTGAGCCACAATGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS CAA 72 bp | GAGGGGATTCCCGAGTCTCGAGCTGTGATGCTGAGATaGTATTCTGGCATGGTCTCACGATCCAGGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: EGIPESRAVMLR*YSGMVSRSRAA Trigger: TGCAGCCCTGGATCGTGAGACCATGCCAGAATACAATCTCAGCATCACAGCTCGAGACTCGGGAATCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS CAA 90 bp | GCTGAGAGAGAGGGGATTCCCGAGTCTCGAGCTGTGATGCTGAGATaGTATTCTGGCATGGTCTCACGATCCAGGGCTGCACTGGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: AEREGIPESRAVMLR*YSGMVSRSRAALVF Trigger: GAAAACCAGTGCAGCCCTGGATCGTGAGACCATGCCAGAATACAATCTCAGCATCACAGCTCGAGACTCGGGAATCCCCTCTCTCTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS TCA 72 bp | GATTGTGGCTGCCGAAGGAGTAAACGATTTCTCCGTTaGGGCCCTCATCCAGGTCAGTTGCAAGAACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: DCGCRRSKRFLR*GPHPGQLQEPG Trigger: CCCAGGTTCTTGCAACTGACCTGGATGAGGGCCTCAACGGAGAAATCGTTTACTCCTTCGGCAGCCACAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS TCA 72 bp | CATGGAGTTTGGTGTCTTCGAAGTCCAGGCGACCCTTaGTTGTCAGCACCCCGGTTACGAGGTCTAAAGCGA | + |
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Preference number: 6 (lower is better) Translates to: HGVWCLRSPGDP*LSAPRLRGLKR Trigger: TCGCTTTAGACCTCGTAACCGGGGTGCTGACAATCAAGGGTCGCCTGGACTTCGAAGACACCAAACTCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS CAA 72 bp | TCATGGAGTTTGGTGTCTTCGAAGTCCAGGCGACCCTaGATTGTCAGCACCCCGGTTACGAGGTCTAAAGCG | + |
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Preference number: 6 (lower is better) Translates to: SWSLVSSKSRRP*IVSTPVTRSKA Trigger: CGCTTTAGACCTCGTAACCGGGGTGCTGACAATCAAGGGTCGCCTGGACTTCGAAGACACCAAACTCCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS CAA 90 bp | TCGCTAATCTCCAATTTCATTTCCCCGGTGGGGAAAGAGGGATTGTaGTCGTTGATGTCCTGGACCACCACTTCCGCGCTGAACAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SLISNFISPVGKEGL*SLMSWTTTSALNSS Trigger: GGAGCTGTTCAGCGCGGAAGTGGTGGTCCAGGACATCAACGACAACAATCCCTCTTTCCCCACCGGGGAAATGAAATTGGAGATTAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS TCA 72 bp | GATGTCGGACACTTGGACCTTCACTGTTGTAAGAGCTaGGAGAGAGGGGATTCCCGAGTCTCGAGCTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: DVGHLDLHCCKS*ERGDSRVSSCD Trigger: ATCACAGCTCGAGACTCGGGAATCCCCTCTCTCTCAGCTCTTACAACAGTGAAGGTCCAAGTGTCCGACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS GCA 72 bp | TCATTTACGTCTACAACCTCTACAAGTACTTTGCAATaGGCTCCTTCGGGATTGGCACCTTTGTCTTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SFTSTTSTSTLQ*APSGLAPLSLA Trigger: GGCCAAAGACAAAGGTGCCAATCCCGAAGGAGCGCATTGCAAAGTACTTGTAGAGGTTGTAGACGTAAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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| CDS GCA 72 bp | GAGATTGTATTCTGGCATGGTCTCACGATCCAGGGCTaGACTGGTTTTCAAAGTGAAGTAATTCTTGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: EIVFWHGLTIQG*TGFQSEVILEG Trigger: TCCCTCAAGAATTACTTCACTTTGAAAACCAGTGCAGCCCTGGATCGTGAGACCATGCCAGAATACAATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076807.7 |
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