Pregenerated sensors for PCDHB22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073591Ensembl transcript IDs: ENSMUST00000097609.3, ENSMUST00000192409.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGGGTGCACCACCACTaGCTGGCTCCACTTCCATCTTTTAGGTCTTCATCAGCTGCATCC | + |
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Preference number: 1 (lower is better) Translates to: CLCLLSAGIKGVHHH*LAPLPSFRSSSAAS Trigger: GGATGCAGCTGATGAAGACCTAAAAGATGGAAGTGGAGCCAGGCAGTGGTGGTGCACCCCTTTAATCCCAGCACTCAGGAGGCAGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR CCA 90 bp | ATTCAGCTAGAGACACGAGCTCCGGGGGTGGTGGTGGTGTGGTACTaGTTAGTTCATATTGTTGTTCCACCTATAGGATTGCAGATCCCT | + |
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Preference number: 1 (lower is better) Translates to: IQLETRAPGVVVVWY*LVHIVVPPIGLQIP Trigger: AGGGATCTGCAATCCTATAGGTGGAACAACAATATGAACTAACCAGTACCACACCACCACCACCCCCGGAGCTCGTGTCTCTAGCTGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR CCA 90 bp | ATTCATATTCAGCTAGAGACACGAGCTCCGGGGGTGGTGGTGGTGTaGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGATTGCAG | + |
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Preference number: 1 (lower is better) Translates to: IHIQLETRAPGVVVV*YWLVHIVVPPIGLQ Trigger: CTGCAATCCTATAGGTGGAACAACAATATGAACTAACCAGTACCACACCACCACCACCCCCGGAGCTCGTGTCTCTAGCTGAATATGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR CCA 90 bp | GAAAGAGTTTATTTTTGCTTACATTTCCAGAGGGAGAATATACAATaGTTGGTGAGGTACAGCAGCAGGCAGCAGAGCAAGCAGCTGACA | + |
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Preference number: 1 (lower is better) Translates to: ERVYFCLHFQRENIQ*LVRYSSRQQSKQLT Trigger: TGTCAGCTGCTTGCTCTGCTGCCTGCTGCTGTACCTCACCAACCATTGTATATTCTCCCTCTGGAAATGTAAGCAAAAATAAACTCTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR TCA 90 bp | AGCAACTGCCAGATAACTTATAAGACAATGGGAACCTGGATGAACTaGCCTAACAAATTTGAATCTCTGGGCCTGCTTCAAAACAACTCA | + |
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Preference number: 1 (lower is better) Translates to: SNCQITYKTMGTWMN*PNKFESLGLLQNNS Trigger: TGAGTTGTTTTGAAGCAGGCCCAGAGATTCAAATTTGTTAGGTCAGTTCATCCAGGTTCCCATTGTCTTATAAGTTATCTGGCAGTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR CCA 90 bp | TCTACATCGCTGGGTAGATTCAGCTTTGCTTTTAAATCTTTTCACTaGTTCTCTCAGACCCACCCAAATGATCTAGAATATACACCCTGT | + |
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Preference number: 1 (lower is better) Translates to: STSLGRFSFAFKSFH*FSQTHPNDLEYTPC Trigger: ACAGGGTGTATATTCTAGATCATTTGGGTGGGTCTGAGAGAACCAGTGAAAAGATTTAAAAGCAAAGCTGAATCTACCCAGCGATGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR TCA 90 bp | CATATGGCATTCTGTACAACCAGAAACTACCCTGAGGACAGAATTTaGGGTTTACATCAGGATTTTCCCACTATAACAAGTAAAAGCGTG | + |
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Preference number: 1 (lower is better) Translates to: HMAFCTTRNYPEDRI*GLHQDFPTITSKSV Trigger: CACGCTTTTACTTGTTATAGTGGGAAAATCCTGATGTAAACCTCAAATTCTGTCCTCAGGGTAGTTTCTGGTTGTACAGAATGCCATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR TCA 90 bp | CCCAAAGCATTTACATATGGCATTCTGTACAACCAGAAACTACCCTaGGGACAGAATTTGAGGTTTACATCAGGATTTTCCCACTATAAC | + |
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Preference number: 1 (lower is better) Translates to: PKAFTYGILYNQKLP*GQNLRFTSGFSHYN Trigger: GTTATAGTGGGAAAATCCTGATGTAAACCTCAAATTCTGTCCTCAGGGTAGTTTCTGGTTGTACAGAATGCCATATGTAAATGCTTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR GCA 90 bp | ATTTCTACCAAGTCTATACAAAGCAACCTGAACCTTTTCTGTCTCTaGACCTTCACCCAATTAAAAACCCATGTCCATACTTCTCTCCAA | + |
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Preference number: 1 (lower is better) Translates to: ISTKSIQSNLNLFCL*TFTQLKTHVHTSLQ Trigger: TTGGAGAGAAGTATGGACATGGGTTTTTAATTGGGTGAAGGTGCAGAGACAGAAAAGGTTCAGGTTGCTTTGTATAGACTTGGTAGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR CCA 90 bp | CCATCAGGAAACACAGATATTGAACTTTTTAGTAAACTCCCAAAGTaGAATAAGTCACTTCCTTGTGGTATGACAGTCAGAATATGTCAG | + |
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Preference number: 1 (lower is better) Translates to: PSGNTDIELFSKLPK*NKSLPCGMTVRICQ Trigger: CTGACATATTCTGACTGTCATACCACAAGGAAGTGACTTATTCCACTTTGGGAGTTTACTAAAAAGTTCAATATCTGTGTTTCCTGATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR CCA 90 bp | CACCCACCCACTCCCACTTCTTGGTCCTGGCATTCCCCTGTACTGAGTCATATACACGAGCTCCGGGGGTaGTGGTGGTGTGGTACTGGT | + |
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Preference number: 2 (lower is better) Translates to: HPPTPTSWSWHSPVLSHIHELRG*WWCGTG Trigger: ACCAGTACCACACCACCACCACCCCCGGAGCTCGTG...TATATGACTCAGTACAGGGGAATGCCAGGACCAAGAAGTGGGAGTGGGTGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTCTGTAGACCAGGCTGGCCTCAAGCTTAAAGATCTGCCTGCCTCTGCCTCCCTGGTTTCCATGAGATaGTATTTACAGTGTTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PSVDQAGLKLKDLPASASLVSMR*YLQCWR Trigger: TCTCCAACACTGTAAATATCATCTCATGGAAACCAG...GGAGGCAGAGGCAGGCAGATCTTTAAGCTTGAGGCCAGCCTGGTCTACAGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCACCTTCACCCAATTAAAAACCCATGTCCATACTTCTCTCCAAAACGGACCTGCCTCTGCCTCCTaGGTGCTGGGATTAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LCTFTQLKTHVHTSLQNGPASAS*VLGLKG Trigger: CCCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGG...TCCGTTTTGGAGAGAAGTATGGACATGGGTTTTTAATTGGGTGAAGGTGCAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR CCA 90 bp | ATACAATGGTTGGTGAGGTACAGCAGCAGGCAGCAGAGCAAGCAGCTGACAGATTGCACCACCACTGCCTaGCTCCACTTCCATCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: IQWLVRYSSRQQSKQLTDCTTTA*LHFHLL Trigger: TAAAAGATGGAAGTGGAGCCAGGCAGTGGTGGTGCA...ATCTGTCAGCTGCTTGCTCTGCTGCCTGCTGCTGTACCTCACCAACCATTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR TCA 90 bp | ATACAATGGTTGGTGAGGTACAGCAGCAGGCAGCAGAGCAAGCAGCTGACAGATGAGCGTGAAGTGTCCTaGTGTAAAATGTTCAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: IQWLVRYSSRQQSKQLTDEREVS*CKMFSN Trigger: GTTGCTGAACATTTTACATCAGGACACTTCACGCTC...ATCTGTCAGCTGCTTGCTCTGCTGCCTGCTGCTGTACCTCACCAACCATTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR TCA 90 bp | ATACAATGGTTGGTGAGGTACAGCAGCAGGCAGCAGAGCAAGCAGCTGACAGATTCAGACCCACCCAAATaGTCTAGAATATACACCCTG | + |
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Preference number: 2 (lower is better) Translates to: IQWLVRYSSRQQSKQLTDSDPPK*SRIYTL Trigger: CAGGGTGTATATTCTAGATCATTTGGGTGGGTCTGA...ATCTGTCAGCTGCTTGCTCTGCTGCCTGCTGCTGTACCTCACCAACCATTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGCTTCAAAACAACTCAACATATGAGAAGGCTTATAGGATTGATCCGAGTGGCCTCTCTTTCCACTaGTGGCCGACTAGGCCATCT | + |
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Preference number: 2 (lower is better) Translates to: GLLQNNSTYEKAYRIDPSGLSFH*WPTRPS Trigger: AGATGGCCTAGTCGGCCATCAGTGGAAAGAGAGGCC...ACTCGGATCAATCCTATAAGCCTTCTCATATGTTGAGTTGTTTTGAAGCAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGGTGAGGTACAGCAGCAGGCAGCAGAGCAAGCAGCTGACAGATCACATCTTATGTGCCACTATCTCTaGCTATTCTTCTACATCGCT | + |
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Preference number: 2 (lower is better) Translates to: VGEVQQQAAEQAADRSHLMCHYL*LFFYIA Trigger: AGCGATGTAGAAGAATAGGCAGAGATAGTGGCACAT...AAGATGTGATCTGTCAGCTGCTTGCTCTGCTGCCTGCTGCTGTACCTCACCAAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR GCA 90 bp | ATGAGCACCACACGCCTCACTTCCTCTTGTGTCTTTACTGGCAGACTTGCTAAGGGGACTAAAGGCATGTaGCACTATCTCTGCCTATTC | + |
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Preference number: 2 (lower is better) Translates to: MSTTRLTSSCVFTGRLAKGTKGM*HYLCLF Trigger: GAATAGGCAGAGATAGTGGCACATGCCTTTAGTCCC...CTTAGCAAGTCTGCCAGTAAAGACACAAGAGGAAGTGAGGCGTGTGGTGCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCCGGGGGTGGTGGTGGTGTGGTACTGGTTAGTTCATATTGTTGTTCCACCTGGGTCTGGTTTCCATaGGATGATATTTACAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: SSGGGGGVVLVSSYCCSTWVWFP*DDIYSV Trigger: AACACTGTAAATATCATCTCATGGAAACCAGACCCA...GGTGGAACAACAATATGAACTAACCAGTACCACACCACCACCACCCCCGGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR TCA 90 bp | ATACAATGGTTGGTGAGGTACAGCAGCAGGCAGCAGAGCAAGCAGCTGACAGATAACCAGAAACTACCCTaGGGACAGAATTTGAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: IQWLVRYSSRQQSKQLTDNQKLP*GQNLRF Trigger: AAACCTCAAATTCTGTCCTCAGGGTAGTTTCTGGTT...ATCTGTCAGCTGCTTGCTCTGCTGCCTGCTGCTGTACCTCACCAACCATTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGGTGAGGTACAGCAGCAGGCAGCAGAGCAAGCAGCTGACAGATCACATCTTAGGACTGAACATCTTTaGGGGAATCTTTCTGAATAT | + |
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Preference number: 2 (lower is better) Translates to: VGEVQQQAAEQAADRSHLRTEHL*GNLSEY Trigger: ATATTCAGAAAGATTCCCCCAAAGATGTTCAGTCCT...AAGATGTGATCTGTCAGCTGCTTGCTCTGCTGCCTGCTGCTGTACCTCACCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR GCA 90 bp | CATGTCCATACTTCTCTCCAAAACGGAGTGTATCTGTGTAGCCCTGGCTGTACTAGCCCAGGCTTAGCTTaGATTCTCTATGTAGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: HVHTSLQNGVYLCSPGCTSPGLA*ILYVED Trigger: ATCTTCTACATAGAGAATGCAAGCTAAGCCTGGGCT...AGTACAGCCAGGGCTACACAGATACACTCCGTTTTGGAGAGAAGTATGGACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCACCTTCACCCAATTAAAAACCCATGTCCATACTTCTCTCCAAAACGGAAGATCAGCTTGTCTCTaGCTCCCAAATGTGGGACTA | + |
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Preference number: 2 (lower is better) Translates to: LCTFTQLKTHVHTSLQNGRSACL*LPNVGL Trigger: TAGTCCCACATTTGGGAGGCAGAGACAAGCTGATCT...TCCGTTTTGGAGAGAAGTATGGACATGGGTTTTTAATTGGGTGAAGGTGCAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCTGCTTCAAAACAACTCAACATATGAGAAGGCTTATAGGATTGATCCGAGTTCAAGCTTAAAGATCTaGCTGCCTCTGCCTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: GLLQNNSTYEKAYRIDPSSSLKI*LPLPPE Trigger: CTCAGGAGGCAGAGGCAGGCAGATCTTTAAGCTTGA...ACTCGGATCAATCCTATAAGCCTTCTCATATGTTGAGTTGTTTTGAAGCAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR CAA 90 bp | CCACTATCTCTGCCTATTCTTCTACATCGCTGGGTAGATTCAGCTTaGCTTTTAAATCTTTTCACTGGTTCTCTCAGACCCACCCAAATG | + |
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Preference number: 2 (lower is better) Translates to: PLSLPILLHRWVDSA*LLNLFTGSLRPTQM Trigger: CATTTGGGTGGGTCTGAGAGAACCAGTGAAAAGATTTAAAAGCAAAGCTGAATCTACCCAGCGATGTAGAAGAATAGGCAGAGATAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR TCA 90 bp | GACTTAATGTCATCAGTATCATGCCAAGGGCTCCCATCAGCTAAAGACAATGAAAAGAGAGAGAGTGAATaGTGTGGGTCTGGTTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: DLMSSVSCQGLPSAKDNEKRESE*CGSGFH Trigger: ATGGAAACCAGACCCACATCATTCACTCTCTCTCTT...TTCATTGTCTTTAGCTGATGGGAGCCCTTGGCATGATACTGATGACATTAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCACCTTCACCCAATTAAAAACCCATGTCCATACTTCTCTCCAAAACGGAAGTAAACTCCCAAAGTaGAATAAGTCACTTCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: LCTFTQLKTHVHTSLQNGSKLPK*NKSLPC Trigger: ACAAGGAAGTGACTTATTCCACTTTGGGAGTTTACT...TCCGTTTTGGAGAGAAGTATGGACATGGGTTTTTAATTGGGTGAAGGTGCAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGCTTCAAAACAACTCAACATATGAGAAGGCTTATAGGATTGATCCGAGTTGGAGAACAGAAAGATaGGACCAACTTCTGAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: GLLQNNSTYEKAYRIDPSWRTER*DQLLKV Trigger: AACTTTCAGAAGTTGGTCCCATCTTTCTGTTCTCCA...ACTCGGATCAATCCTATAAGCCTTCTCATATGTTGAGTTGTTTTGAAGCAGGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR CAA 90 bp | CTCAGGCTTCAACTGGAGAAAGAGAGCCATCAGGAAACACAGATATaGAACTTTTTAGTAAACTCCCAAAGTGGAATAAGTCACTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LRLQLEKESHQETQI*NFLVNSQSGISHFL Trigger: AAGGAAGTGACTTATTCCACTTTGGGAGTTTACTAAAAAGTTCAATATCTGTGTTTCCTGATGGCTCTCTTTCTCCAGTTGAAGCCTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCTGCTTCAAAACAACTCAACATATGAGAAGGCTTATAGGATTGATCCGAGTAACCTTTTCTGTCTCTaGACCTTCACCCAATTAAAA | + |
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Preference number: 2 (lower is better) Translates to: GLLQNNSTYEKAYRIDPSNLFCL*TFTQLK Trigger: TTTTAATTGGGTGAAGGTGCAGAGACAGAAAAGGTT...ACTCGGATCAATCCTATAAGCCTTCTCATATGTTGAGTTGTTTTGAAGCAGGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCACCTTCACCCAATTAAAAACCCATGTCCATACTTCTCTCCAAAACGGACAAAGCATTTACATATaGCATTCTGTACAACCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LCTFTQLKTHVHTSLQNGQSIYI*HSVQPE Trigger: TTCTGGTTGTACAGAATGCCATATGTAAATGCTTTG...TCCGTTTTGGAGAGAAGTATGGACATGGGTTTTTAATTGGGTGAAGGTGCAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR TCA 90 bp | TATCAATCAGCAATATCATCACCCAAAGCATTTACATATGGCATTCTGTACAACCTTCCTGGAGCTGATTaGCTTAATGTCATCAGTATC | + |
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Preference number: 2 (lower is better) Translates to: YQSAISSPKAFTYGILYNLPGAD*LNVISI Trigger: GATACTGATGACATTAAGTCAATCAGCTCCAGGAAG...GTTGTACAGAATGCCATATGTAAATGCTTTGGGTGATGATATTGCTGATTGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGATGGGACCAACTTCTGAAAGTTCTTTCAGTCACAGAGTATGTTATACACAAATCATCCAATACTaGATCAACACATCCTTACTA | + |
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Preference number: 2 (lower is better) Translates to: RKMGPTSESSFSHRVCYTQIIQY*INTSLL Trigger: TAGTAAGGATGTGTTGATGCAGTATTGGATGATTTG...TGTATAACATACTCTGTGACTGAAAGAACTTTCAGAAGTTGGTCCCATCTTTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR TCA 72 bp | TGGGTACTTTCTCTAGCTTCTCCACTGGGGGCCCTGTaGTACATCCAGAGTTTCCCTCCAGGCATCAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: WVLSLASPLGAL*YIQSFPPGIRS Trigger: GGACCTGATGCCTGGAGGGAAACTCTGGATGTATCACAGGGCCCCCAGTGGAGAAGCTAGAGAAAGTACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR TCA 72 bp | AGAGGAAGCTGGATGTGGAGTAGTGCTATGAACTCTTaGAGCCCACCAGCAGTAAGGTGCGTTCTCCAGCCG | + |
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Preference number: 3 (lower is better) Translates to: RGSWMWSSAMNS*SPPAVRCVLQP Trigger: CGGCTGGAGAACGCACCTTACTGCTGGTGGGCTTCAAGAGTTCATAGCACTACTCCACATCCAGCTTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR GCA 72 bp | CAGCTCGCCTTGAACTCACAGAGATCAGCTTGTCTCTaGCTCCCAAATGTGGGACTAAAGGCATGTGCCACT | + |
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Preference number: 3 (lower is better) Translates to: QLALNSQRSACL*LPNVGLKACAT Trigger: AGTGGCACATGCCTTTAGTCCCACATTTGGGAGGCAGAGACAAGCTGATCTCTGTGAGTTCAAGGCGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR GCA 72 bp | CTCCTGAGTGCTGGGATTAAAGGGGTGCACCACCACTaGCTGGCTCCACTTCCATCTTTTAGGTCTTCATCA | + |
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Preference number: 3 (lower is better) Translates to: LLSAGIKGVHHH*LAPLPSFRSSS Trigger: TGATGAAGACCTAAAAGATGGAAGTGGAGCCAGGCAGTGGTGGTGCACCCCTTTAATCCCAGCACTCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR GCA 72 bp | ACCAGCAGTAAGGTGCGTTCTCCAGCCGACCTTTACTaGCTCCCCAAACATATCCAGAATCTGGGGACTAAG | + |
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Preference number: 3 (lower is better) Translates to: TSSKVRSPADLY*LPKHIQNLGTK Trigger: CTTAGTCCCCAGATTCTGGATATGTTTGGGGAGGCAGTAAAGGTCGGCTGGAGAACGCACCTTACTGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR CCA 72 bp | GTTCCACCTATAGGATTGCAGATCCCTTTAGCTCCTTaGGTACTTTCTCTAGCTTCTCCACTGGGGGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: VPPIGLQIPLAP*VLSLASPLGAL Trigger: CAGGGCCCCCAGTGGAGAAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAATCCTATAGGTGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR CAA 90 bp | CACCCACCCACTCCCACTTCTTGGTCCTGGCATTCCCCTGTACTGAGTCATATAACGCCTCACTTCCTCTaGTGTCTTTACTGGCAGACT | + |
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Preference number: 3 (lower is better) Translates to: HPPTPTSWSWHSPVLSHITPHFL*CLYWQT Trigger: AGTCTGCCAGTAAAGACACAAGAGGAAGTGAGGCGT...TATATGACTCAGTACAGGGGAATGCCAGGACCAAGAAGTGGGAGTGGGTGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR CAA 90 bp | CACCCACCCACTCCCACTTCTTGGTCCTGGCATTCCCCTGTACTGAGTCATATAGATCCCTTTAGCTCCTaGGGTACTTTCTCTAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: HPPTPTSWSWHSPVLSHIDPFSS*GTFSSF Trigger: GAAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATC...TATATGACTCAGTACAGGGGAATGCCAGGACCAAGAAGTGGGAGTGGGTGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR CCA 72 bp | GAGACACGAGCTCCGGGGGTGGTGGTGGTGTGGTACTaGTTAGTTCATATTGTTGTTCCACCTATAGGATTG | + |
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Preference number: 3 (lower is better) Translates to: ETRAPGVVVVWY*LVHIVVPPIGL Trigger: CAATCCTATAGGTGGAACAACAATATGAACTAACCAGTACCACACCACCACCACCCCCGGAGCTCGTGTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAGCACCACACGCCTCACTTCCTCTTGTGTCTTTACTGGCAGACTTGCTAAGCTCACAGAGATCAGCTaGTCTCTGCCTCCCAAATGT | + |
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Preference number: 3 (lower is better) Translates to: MSTTRLTSSCVFTGRLAKLTEIS*SLPPKC Trigger: ACATTTGGGAGGCAGAGACAAGCTGATCTCTGTGAG...CTTAGCAAGTCTGCCAGTAAAGACACAAGAGGAAGTGAGGCGTGTGGTGCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR TCA 72 bp | ACACACACCCCACTTTTCAGTCTTCCTGGAGCTGATTaGCTTAATGTCATCAGTATCATGCCAAGGGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: THTPLFSLPGAD*LNVISIMPRAP Trigger: GGGAGCCCTTGGCATGATACTGATGACATTAAGTCAATCAGCTCCAGGAAGACTGAAAAGTGGGGTGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR-3UTR CAA 90 bp | GTTGGTGAGGTACAGCAGCAGGCAGCAGAGCAAGCAGCTGACAGATCACATCTTTTAATAGTGTTTTCCTaGCCTGGGCTCTTACTAGTA | + |
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Preference number: 3 (lower is better) Translates to: VGEVQQQAAEQAADRSHLLIVFS*PGLLLV Trigger: TACTAGTAAGAGCCCAGGCAAGGAAAACACTATTAA...AAGATGTGATCTGTCAGCTGCTTGCTCTGCTGCCTGCTGCTGTACCTCACCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| 3UTR CCA 72 bp | TATTTTTGCTTACATTTCCAGAGGGAGAATATACAATaGTTGGTGAGGTACAGCAGCAGGCAGCAGAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: YFCLHFQRENIQ*LVRYSSRQQSK Trigger: CTTGCTCTGCTGCCTGCTGCTGTACCTCACCAACCATTGTATATTCTCCCTCTGGAAATGTAAGCAAAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| 3UTR TCA 72 bp | AGGCACAGTGGAGAACAGAAAGATGGGACCAACTTCTaGAAGTTCTTTCAGTCACAGAGTATGTTATACAAT | + |
|
Preference number: 3 (lower is better) Translates to: RHSGEQKDGTNF*KFFQSQSMLYN Trigger: ATTGTATAACATACTCTGTGACTGAAAGAACTTTCAGAAGTTGGTCCCATCTTTCTGTTCTCCACTGTGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| 3UTR TCA 72 bp | CAGATAACTTATAAGACAATGGGAACCTGGATGAACTaGCCTAACAAATTTGAATCTCTGGGCCTGCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QITYKTMGTWMN*PNKFESLGLLQ Trigger: TTGAAGCAGGCCCAGAGATTCAAATTTGTTAGGTCAGTTCATCCAGGTTCCCATTGTCTTATAAGTTATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| 3UTR CCA 72 bp | CATGTGCCACTATCTCTGCCTATTCTTCTACATCGCTaGGTAGATTCAGCTTTGCTTTTAAATCTTTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: HVPLSLPILLHR*VDSALLLNLFT Trigger: AGTGAAAAGATTTAAAAGCAAAGCTGAATCTACCCAGCGATGTAGAAGAATAGGCAGAGATAGTGGCACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| 3UTR TCA 72 bp | TTTACATATGGCATTCTGTACAACCAGAAACTACCCTaGGGACAGAATTTGAGGTTTACATCAGGATTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: FTYGILYNQKLP*GQNLRFTSGFS Trigger: GGAAAATCCTGATGTAAACCTCAAATTCTGTCCTCAGGGTAGTTTCTGGTTGTACAGAATGCCATATGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| 3UTR TCA 72 bp | GACTATGGCAAATTCAATCAGGAGCGTGAAGTGTCCTaGTGTAAAATGTTCAGCAACAATAGATTTGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: DYGKFNQEREVS*CKMFSNNRFGK Trigger: TTTTCCAAATCTATTGTTGCTGAACATTTTACATCAGGACACTTCACGCTCCTGATTGAATTTGCCATAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097609.3 ENSMUST00000192409.2 |
||
| 3UTR TCA 72 bp | TCATCATTGCTTCCAAAGGACAAGAACTACTCCTACTaGTTGGCTGTTAATAACAATAGCCTGGAGAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: SSLLPKDKNYSY*LAVNNNSLEKI Trigger: TATTTTCTCCAGGCTATTGTTATTAACAGCCAATCAGTAGGAGTAGTTCTTGTCCTTTGGAAGCAATGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| 3UTR TCA 72 bp | GAGAGAGTGAATGATGTGGGTCTGGTTTCCATGAGATaGTATTTACAGTGTTGGAGAATAGAAAACATAATT | + |
|
Preference number: 3 (lower is better) Translates to: ERVNDVGLVSMR*YLQCWRIENII Trigger: AATTATGTTTTCTATTCTCCAACACTGTAAATATCATCTCATGGAAACCAGACCCACATCATTCACTCTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR CCA 90 bp | CACCCACCCACTCCCACTTCTTGGTCCTGGCATTCCCCTGTACTGAGTCATATACGGGCTCTGCCGCCCTaGGCAGCAGCTCTGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPPTPTSWSWHSPVLSHIRALPP*AAALCR Trigger: CCTGCACAGAGCTGCTGCCCAGGGCGGCAGAGCCCG...TATATGACTCAGTACAGGGGAATGCCAGGACCAAGAAGTGGGAGTGGGTGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR TCA 90 bp | CACCCACCCACTCCCACTTCTTGGTCCTGGCATTCCCCTGTACTGAGTCATATACCAGAGCCTGGCTGCTaGGCGCTGGTGAGCCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HPPTPTSWSWHSPVLSHIPEPGC*ALVSLG Trigger: ACCGAGGCTCACCAGCGCTCAGCAGCCAGGCTCTGG...TATATGACTCAGTACAGGGGAATGCCAGGACCAAGAAGTGGGAGTGGGTGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR CCA 90 bp | CACCCACCCACTCCCACTTCTTGGTCCTGGCATTCCCCTGTACTGAGTCATATAGTTGAGGGCCAGCTGTaGCTCCTGGGCCGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HPPTPTSWSWHSPVLSHIVEGQL*LLGRQQ Trigger: TTGCTGCCGGCCCAGGAGCCACAGCTGGCCCTCAAC...TATATGACTCAGTACAGGGGAATGCCAGGACCAAGAAGTGGGAGTGGGTGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR GCA 90 bp | CATGTCCATACTTCTCTCCAAAACGGAGTGTATCTGTGTAGCCCTGGCTGTACTCTGAGACAGGGTCCCTaGCCCGCTGACATCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: HVHTSLQNGVYLCSPGCTLRQGP*PADIHQ Trigger: CTGGTGGATGTCAGCGGGGCAGGGACCCTGTCTCAG...AGTACAGCCAGGGCTACACAGATACACTCCGTTTTGGAGAGAAGTATGGACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCCGGGGGTGGTGGTGGTGTGGTACTGGTTAGTTCATATTGTTGTTCCACCACAACAATGCGGATTTaGGAGGTGCCAGTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSGGGGGVVLVSSYCCSTTTMRI*EVPVLG Trigger: GCCCAGGACTGGCACCTCGCAAATCCGCATTGTTGT...GGTGGAACAACAATATGAACTAACCAGTACCACACCACCACCACCCCCGGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR TCA 90 bp | GTTGGTGAGGTACAGCAGCAGGCAGCAGAGCAAGCAGCTGACAGATCACATCTTACACTTGGAAATGAGTaGCACAGGGCTCAGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGEVQQQAAEQAADRSHLTLGNE*HRAQWS Trigger: GCTCCACTGAGCCCTGTGTCACTCATTTCCAAGTGT...AAGATGTGATCTGTCAGCTGCTTGCTCTGCTGCCTGCTGCTGTACCTCACCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCTGTAGACCAGGCTGGCCTCAAGCTTAAAGATCTGCCTGCCTCTGCCTCCGAACACCATCCTGGATaGAACAAATTGTCCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSVDQAGLKLKDLPASASEHHPG*NKLSFH Trigger: ATGGAAGGACAATTTGTTCCATCCAGGATGGTGTTC...GGAGGCAGAGGCAGGCAGATCTTTAAGCTTGAGGCCAGCCTGGTCTACAGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGCACCACACGCCTCACTTCCTCTTGTGTCTTTACTGGCAGACTTGCTAAGGCAGCAGCCTGTGCTTaGGTACATCTCGCTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: MSTTRLTSSCVFTGRLAKAAACA*VHLAHS Trigger: TGAGTGAGCGAGATGTACCCAAGCACAGGCTGCTGC...CTTAGCAAGTCTGCCAGTAAAGACACAAGAGGAAGTGAGGCGTGTGGTGCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| 3UTR CAA 72 bp | TGTAGAGCAGCTCGCCTTGAACTCACAGAGATCAGCTaGTCTCTGCCTCCCAAATGTGGGACTAAAGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: CRAARLELTEIS*SLPPKCGTKGM Trigger: CATGCCTTTAGTCCCACATTTGGGAGGCAGAGACAAGCTGATCTCTGTGAGTTCAAGGCGAGCTGCTCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR GCA 90 bp | TTAAAAATTTGTCATCATTGCTTCCAAAGGACAAGAACTACTCCTACTGATTGGCAGGTAGCCGGGCTCTaGCGCCCTGGGCAGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKICHHCFQRTRTTPTDWQVAGL*RPGQQL Trigger: GAGCTGCTGCCCAGGGCGGCAGAGCCCGGCTACCTG...CCAATCAGTAGGAGTAGTTCTTGTCCTTTGGAAGCAATGATGACAAATTTTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR TCA 90 bp | ATACAATGGTTGGTGAGGTACAGCAGCAGGCAGCAGAGCAAGCAGCTGACAGATGTGAAAAAGAGAGTATaGTACCTCTCCATTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IQWLVRYSSRQQSKQLTDVKKRV*YLSICP Trigger: GGGACAAATGGAGAGGTATCATACTCTCTTTTTCAC...ATCTGTCAGCTGCTTGCTCTGCTGCCTGCTGCTGTACCTCACCAACCATTGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR TCA 90 bp | TTAAAAATTTGTCATCATTGCTTCCAAAGGACAAGAACTACTCCTACTGATTGGGCTGCTGAGCGCTGGTaGGCCTCGGTCTGTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LKICHHCFQRTRTTPTDWAAERW*ASVCGT Trigger: AGTGCCACAGACCGAGGCTCACCAGCGCTCAGCAGC...CCAATCAGTAGGAGTAGTTCTTGTCCTTTGGAAGCAATGATGACAAATTTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCCGGGGGTGGTGGTGGTGTGGTACTGGTTAGTTCATATTGTTGTTCCACCTTGAACTCATTACTCTaGGAATCTCCTGTAAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SSGGGGGVVLVSSYCCSTLNSLL*ESPVRH Trigger: GTGTCTTACAGGAGATTCTCAGAGTAATGAGTTCAA...GGTGGAACAACAATATGAACTAACCAGTACCACACCACCACCACCCCCGGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCACCTTCACCCAATTAAAAACCCATGTCCATACTTCTCTCCAAAACGGACCGGTAGAAAGCCTGTaGAAACTCAGGGGCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LCTFTQLKTHVHTSLQNGPVESL*KLRGIV Trigger: GACAATGCCCCTGAGTTTGCACAGGCTTTCTACCGG...TCCGTTTTGGAGAGAAGTATGGACATGGGTTTTTAATTGGGTGAAGGTGCAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCCGGGGGTGGTGGTGGTGTGGTACTGGTTAGTTCATATTGTTGTTCCACCCAGGCTTCAAGAATTTaGACTCATTACTCTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGGGGGVVLVSSYCCSTQASRI*THYSEN Trigger: ATTCTCAGAGTAATGAGTTCAAATTCTTGAAGCCTG...GGTGGAACAACAATATGAACTAACCAGTACCACACCACCACCACCCCCGGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR CCA 90 bp | AAATCTTTTCACTGGTTCTCTCAGACCCACCCAAATGATCTAGAATATACACCCCTGACATCCACCAGGTaGCCAGGAAAGTGTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSFHWFSQTHPNDLEYTPLTSTR*PGKCPS Trigger: TGAGGGACACTTTCCTGGCCACCTGGTGGATGTCAG...GGGTGTATATTCTAGATCATTTGGGTGGGTCTGAGAGAACCAGTGAAAAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| 3UTR CAA 72 bp | TTTTGCTTACATTTCCAGAGGGAGAATATACAATGGTaGGTGAGGTACAGCAGCAGGCAGCAGAGCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FCLHFQRENIQW*VRYSSRQQSKQ Trigger: CTGCTTGCTCTGCTGCCTGCTGCTGTACCTCACCAACCATTGTATATTCTCCCTCTGGAAATGTAAGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR GCA 90 bp | TTAAAAATTTGTCATCATTGCTTCCAAAGGACAAGAACTACTCCTACTGATTGGTGGGCAGCAGCTCTGTaGAGGGCGCAGAGGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKICHHCFQRTRTTPTDWWAAAL*RAQRHS Trigger: AGAATGCCTCTGCGCCCTGCACAGAGCTGCTGCCCA...CCAATCAGTAGGAGTAGTTCTTGTCCTTTGGAAGCAATGATGACAAATTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTGCTTCAAAACAACTCAACATATGAGAAGGCTTATAGGATTGATCCGAGTGATCTGCCAAAACAGTaGCACTGGGTGTTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLLQNNSTYEKAYRIDPSDLPKQ*HWVFPP Trigger: TGGAGGAAACACCCAGTGGCACTGTTTTGGCAGATC...ACTCGGATCAATCCTATAAGCCTTCTCATATGTTGAGTTGTTTTGAAGCAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCACCTTCACCCAATTAAAAACCCATGTCCATACTTCTCTCCAAAACGGAACTGTTATGGTGTGCTaGGTTGTGAGCTTGGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LCTFTQLKTHVHTSLQNGTVMVC*VVSLGM Trigger: CATACCCAAGCTCACAACCCAGCACACCATAACAGT...TCCGTTTTGGAGAGAAGTATGGACATGGGTTTTTAATTGGGTGAAGGTGCAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR TCA 90 bp | TTAAAAATTTGTCATCATTGCTTCCAAAGGACAAGAACTACTCCTACTGATTGGGCAGCAACGAGTAGGTaGTGTGGGCATTGGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKICHHCFQRTRTTPTDWAATSR*CGHWSL Trigger: CAGGCTCCAATGCCCACATCACCTACTCGTTGCTGC...CCAATCAGTAGGAGTAGTTCTTGTCCTTTGGAAGCAATGATGACAAATTTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR TCA 90 bp | GACTTAATGTCATCAGTATCATGCCAAGGGCTCCCATCAGCTAAAGACAATGAAACACTTGAGAAGGACTaGTCATCTGGTTGCCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: DLMSSVSCQGLPSAKDNETLEKD*SSGCLP Trigger: TGGTAGGCAACCAGATGATCAGTCCTTCTCAAGTGT...TTCATTGTCTTTAGCTGATGGGAGCCCTTGGCATGATACTGATGACATTAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR TCA 90 bp | CATGTCCATACTTCTCTCCAAAACGGAGTGTATCTGTGTAGCCCTGGCTGTACTACTCGTAGCTCAGCTTaGAATATTTCCAGTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HVHTSLQNGVYLCSPGCTTRSSA*NISSGF Trigger: AAAACCACTGGAAATATTTCAAGCTGAGCTACGAGT...AGTACAGCCAGGGCTACACAGATACACTCCGTTTTGGAGAGAAGTATGGACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGCACCTTCACCCAATTAAAAACCCATGTCCATACTTCTCTCCAAAACGGACCCACATCCAAATCCTaGGCTGTTTTGAGTAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LCTFTQLKTHVHTSLQNGPTSKS*AVLSRN Trigger: GTTTCTACTCAAAACAGCTCAGGATTTGGATGTGGG...TCCGTTTTGGAGAGAAGTATGGACATGGGTTTTTAATTGGGTGAAGGTGCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR GCA 90 bp | TATCAATCAGCAATATCATCACCCAAAGCATTTACATATGGCATTCTGTACAACTCAACAGCCTGGTGGTaGGCACCTCACCATTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: YQSAISSPKAFTYGILYNSTAWW*APHHCA Trigger: CGCACAATGGTGAGGTGCGCACCACCAGGCTGTTGA...GTTGTACAGAATGCCATATGTAAATGCTTTGGGTGATGATATTGCTGATTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| 3UTR CAA 72 bp | CACGCCTCACTTCCTCTTGTGTCTTTACTGGCAGACTaGCTAAGATCACATTTCTACCAAGTCTATACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HASLPLVSLLAD*LRSHFYQVYTK Trigger: CTTTGTATAGACTTGGTAGAAATGTGATCTTAGCAAGTCTGCCAGTAAAGACACAAGAGGAAGTGAGGCGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGATGGGACCAACTTCTGAAAGTTCTTTCAGTCACAGAGTATGTTATACATGCACTGTTATGGTGTaGTGGGTTGTGAGCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKMGPTSESSFSHRVCYTCTVMV*WVVSLG Trigger: ACCCAAGCTCACAACCCAGCACACCATAACAGTGCA...TGTATAACATACTCTGTGACTGAAAGAACTTTCAGAAGTTGGTCCCATCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR CCA 90 bp | GGCCTGCTTCAAAACAACTCAACATATGAGAAGGCTTATAGGATTGATCCGAGTAAGGGAACACCATCCTaGATGGAACAAATTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLLQNNSTYEKAYRIDPSKGTPS*MEQIVL Trigger: AAGGACAATTTGTTCCATCCAGGATGGTGTTCCCTT...ACTCGGATCAATCCTATAAGCCTTCTCATATGTTGAGTTGTTTTGAAGCAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR GCA 90 bp | TTAAAAATTTGTCATCATTGCTTCCAAAGGACAAGAACTACTCCTACTGATTGGTTCCATCACCTCGGTTaGGGATGGAAACATGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKICHHCFQRTRTTPTDWFHHLG*GWKHGN Trigger: ATTTCCATGTTTCCATCCGCAACCGAGGTGATGGAA...CCAATCAGTAGGAGTAGTTCTTGTCCTTTGGAAGCAATGATGACAAATTTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| 3UTR CAA 72 bp | CAACTGGAGAAAGAGAGCCATCAGGAAACACAGATATaGAACTTTTTAGTAAACTCCCAAAGTGGAATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QLEKESHQETQI*NFLVNSQSGIS Trigger: ACTTATTCCACTTTGGGAGTTTACTAAAAAGTTCAATATCTGTGTTTCCTGATGGCTCTCTTTCTCCAGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR GCA 90 bp | TTAAAAATTTGTCATCATTGCTTCCAAAGGACAAGAACTACTCCTACTGATTGGAAGATCAACAGAACTTaGCTTTTTCTGTGTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKICHHCFQRTRTTPTDWKINRT*LFLCSL Trigger: AAGGGAACACAGAAAAAGGCAAGTTCTGTTGATCTT...CCAATCAGTAGGAGTAGTTCTTGTCCTTTGGAAGCAATGATGACAAATTTTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS GCA 90 bp | CCTCAGGCACAGAGCAGCCACCCAGAGAGACCTCCCTGGCCCTCCTaGACAGCCTCACCCCCACAAACAGCAGCACAGACAAGAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PQAQSSHPERPPWPS*TASPPQTAAQTRGR Trigger: TCTTCCTCTTGTCTGTGCTGCTGTTTGTGGGGGTGAGGCTGTGCAGGAGGGCCAGGGAGGTCTCTCTGGGTGGCTGCTCTGTGCCTGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097609.3 ENSMUST00000192409.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCTGTAGACCAGGCTGGCCTCAAGCTTAAAGATCTGCCTGCCTCTGCCTCCGGCTCTCCATTGTCCTaGACCACCAGCAGCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSVDQAGLKLKDLPASASGSPLS*TTSSSL Trigger: CAGGCTGCTGCTGGTGGTCAAGGACAATGGAGAGCC...GGAGGCAGAGGCAGGCAGATCTTTAAGCTTGAGGCCAGCCTGGTCTACAGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS GCA 90 bp | CCGCAACTCCCAGCCCTAGGTCCTGGACTAGATCTGCCAAAACAGTaGCACTGGGTGTTTCCTCCATCACAAAGTAGCGGCGGGGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PQLPALGPGLDLPKQ*HWVFPPSQSSGGVP Trigger: CGGAACCCCGCCGCTACTTTGTGATGGAGGAAACACCCAGTGGCACTGTTTTGGCAGATCTAGTCCAGGACCTAGGGCTGGGAGTTGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR CAA 90 bp | GTTGGTGAGGTACAGCAGCAGGCAGCAGAGCAAGCAGCTGACAGATCACATCTTTGCAGGGCTGGGCTGTaGTTCTCGTGGACGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: VGEVQQQAAEQAADRSHLCRAGL*FSWTSM Trigger: CATGCTCGTCCACGAGAACAACAGCCCAGCCCTGCA...AAGATGTGATCTGTCAGCTGCTTGCTCTGCTGCCTGCTGCTGTACCTCACCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR CAA 90 bp | CATGTCCATACTTCTCTCCAAAACGGAGTGTATCTGTGTAGCCCTGGCTGTACTCCGGGCTCTGTAGCCTaGAGCAGCTGGAACGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: HVHTSLQNGVYLCSPGCTPGSVA*SSWNDS Trigger: GCTGTCGTTCCAGCTGCTCAAGGCTACAGAGCCCGG...AGTACAGCCAGGGCTACACAGATACACTCCGTTTTGGAGAGAAGTATGGACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR CAA 90 bp | ATACAATGGTTGGTGAGGTACAGCAGCAGGCAGCAGAGCAAGCAGCTGACAGATGACCCCCGCCATCAGTaGCCTCTATGTCTAGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IQWLVRYSSRQQSKQLTDDPRHQ*PLCLVH Trigger: ATGAACTAGACATAGAGGCAACTGATGGCGGGGGTC...ATCTGTCAGCTGCTTGCTCTGCTGCCTGCTGCTGTACCTCACCAACCATTGTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR CAA 90 bp | CATGTCCATACTTCTCTCCAAAACGGAGTGTATCTGTGTAGCCCTGGCTGTACTAGCAGCAGCCTGTGCTaGGGTACATCTCGCTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: HVHTSLQNGVYLCSPGCTSSSLC*GTSRSL Trigger: GAGTGAGCGAGATGTACCCAAGCACAGGCTGCTGCT...AGTACAGCCAGGGCTACACAGATACACTCCGTTTTGGAGAGAAGTATGGACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR CAA 90 bp | GGCCTGCTTCAAAACAACTCAACATATGAGAAGGCTTATAGGATTGATCCGAGTGCGGGGGCATTGTCGTaGATGTCGGACACCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GLLQNNSTYEKAYRIDPSAGALS*MSDTCT Trigger: AGTGCAGGTGTCCGACATCAACGACAATGCCCCCGC...ACTCGGATCAATCCTATAAGCCTTCTCATATGTTGAGTTGTTTTGAAGCAGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGCACCACACGCCTCACTTCCTCTTGTGTCTTTACTGGCAGACTTGCTAAGACATACCTAAAACACTaGAGAAGGACTGATCATCTG | + |
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Preference number: 5 (lower is better) Translates to: MSTTRLTSSCVFTGRLAKTYLKH*RRTDHL Trigger: CAGATGATCAGTCCTTCTCAAGTGTTTTAGGTATGT...CTTAGCAAGTCTGCCAGTAAAGACACAAGAGGAAGTGAGGCGTGTGGTGCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| CDS-3UTR CAA 90 bp | GACTTAATGTCATCAGTATCATGCCAAGGGCTCCCATCAGCTAAAGACAATGAAACTGTTCTCTGGAATTaGCACCCGGTAGAAAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: DLMSSVSCQGLPSAKDNETVLWN*HPVESL Trigger: CAGGCTTTCTACCGGGTGCAAATTCCAGAGAACAGT...TTCATTGTCTTTAGCTGATGGGAGCCCTTGGCATGATACTGATGACATTAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| CDS-3UTR CAA 90 bp | ATGAGCACCACACGCCTCACTTCCTCTTGTGTCTTTACTGGCAGACTTGCTAAGTTTTCTGGGATTGGATaGGTGAGCGATGATATAATT | + |
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Preference number: 5 (lower is better) Translates to: MSTTRLTSSCVFTGRLAKFSGIG*VSDDII Trigger: AATTATATCATCGCTCACCAATCCAATCCCAGAAAA...CTTAGCAAGTCTGCCAGTAAAGACACAAGAGGAAGTGAGGCGTGTGGTGCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| CDS-3UTR CAA 90 bp | TTAAAAATTTGTCATCATTGCTTCCAAAGGACAAGAACTACTCCTACTGATTGGATGGAGATGAGTGAGTaGAGGGCCAGCTGTGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LKICHHCFQRTRTTPTDWMEMSE*RASCGS Trigger: GGAGCCACAGCTGGCCCTCAACTCACTCATCTCCAT...CCAATCAGTAGGAGTAGTTCTTGTCCTTTGGAAGCAATGATGACAAATTTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| CDS-3UTR CAA 90 bp | AAATCTTTTCACTGGTTCTCTCAGACCCACCCAAATGATCTAGAATATACACCCCTTCCATCACCTCGGTaGCGGATGGAAACATGGAAA | + |
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Preference number: 5 (lower is better) Translates to: KSFHWFSQTHPNDLEYTPLPSPR*RMETWK Trigger: TTTCCATGTTTCCATCCGCAACCGAGGTGATGGAAG...GGGTGTATATTCTAGATCATTTGGGTGGGTCTGAGAGAACCAGTGAAAAGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| CDS TCA 90 bp | CTATGTCTAGTTCATATGAAGGTGTTGTCTCAAAGTCCAGTGTTTTaGTTAGTCGAACTTCTCCTGACAGGGCGTTTAGCTCAAAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: LCLVHMKVLSQSPVF*LVELLLTGRLAQKF Trigger: AAACTTTTGAGCTAAACGCCCTGTCAGGAGAAGTTCGACTAATCAAAACACTGGACTTTGAGACAACACCTTCATATGAACTAGACATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097609.3 ENSMUST00000192409.2 |
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| CDS-3UTR CAA 90 bp | TATCAATCAGCAATATCATCACCCAAAGCATTTACATATGGCATTCTGTACAACACGGAGATAGTAATGTaGTACTCAGCTCTGATCTCT | + |
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Preference number: 5 (lower is better) Translates to: YQSAISSPKAFTYGILYNTEIVM*YSALIS Trigger: AGAGATCAGAGCTGAGTACAACATTACTATCTCCGT...GTTGTACAGAATGCCATATGTAAATGCTTTGGGTGATGATATTGCTGATTGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| CDS TCA 72 bp | CCAGCTGTGGCTCCTGGGCCGGCAGCAACGAGTAGGTaGTGTGGGCATTGGAGCCTGAGTCTGAGTCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: PAVAPGPAATSR*CGHWSLSLSLW Trigger: CCACAGACTCAGACTCAGGCTCCAATGCCCACATCACCTACTCGTTGCTGCCGGCCCAGGAGCCACAGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097609.3 ENSMUST00000192409.2 |
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| CDS CAA 72 bp | AGCGCCCTGAGCGCGAACAGCTGCCCGTTGTCAGCGTaGATGGAGATGAGTGAGTTGAGGGCCAGCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SALSANSCPLSA*MEMSELRASCG Trigger: GCCACAGCTGGCCCTCAACTCACTCATCTCCATCAACGCTGACAACGGGCAGCTGTTCGCGCTCAGGGCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097609.3 ENSMUST00000192409.2 |
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| CDS CCA 72 bp | TCGTTGATGTCGGACACCTGCACTGTTATGGTGTGCTaGGTTGTGAGCTTGGGTATGCCCAGGTCGGTGACG | + |
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Preference number: 6 (lower is better) Translates to: SLMSDTCTVMVC*VVSLGMPRSVT Trigger: CGTCACCGACCTGGGCATACCCAAGCTCACAACCCAGCACACCATAACAGTGCAGGTGTCCGACATCAACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097609.3 ENSMUST00000192409.2 |
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| CDS CCA 72 bp | CTAGGTCCTGGACTAGATCTGCCAAAACAGTGCCACTaGGTGTTTCCTCCATCACAAAGTAGCGGCGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LGPGLDLPKQCH*VFPPSQSSGGV Trigger: AACCCCGCCGCTACTTTGTGATGGAGGAAACACCCAGTGGCACTGTTTTGGCAGATCTAGTCCAGGACCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| CDS CCA 72 bp | GACCTTAGCAACCATGGAACCCGAGGGACTGTTCTCTaGAATTTGCACCCGGTAGAAAGCCTGTGCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: DLSNHGTRGTVL*NLHPVESLCKL Trigger: GAGTTTGCACAGGCTTTCTACCGGGTGCAAATTCCAGAGAACAGTCCCTCGGGTTCCATGGTTGCTAAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192409.2 |
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| CDS CCA 72 bp | TCAACGGAAGGTTCCAGTGTAAAGGGAACACCATCCTaGATGGAACAAATTGTCCTTCCATTCTCTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: STEGSSVKGTPS*MEQIVLPFSPE Trigger: CTCTGGAGAGAATGGAAGGACAATTTGTTCCATCCAGGATGGTGTTCCCTTTACACTGGAACCTTCCGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097609.3 ENSMUST00000192409.2 |
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| CDS CAA 90 bp | TCTATGTCTAGTTCATATGAAGGTGTTGTCTCAAAGTCCAGTGTTTaGATTAGTCGAACTTCTCCTGACAGGGCGTTTAGCTCAAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: SMSSSYEGVVSKSSV*ISRTSPDRAFSSKV Trigger: AACTTTTGAGCTAAACGCCCTGTCAGGAGAAGTTCGACTAATCAAAACACTGGACTTTGAGACAACACCTTCATATGAACTAGACATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097609.3 ENSMUST00000192409.2 |
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