Pregenerated sensors for PCDHB16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047910Ensembl transcript IDs: ENSMUST00000051442.7
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTTCAGAGTGGGTCAGAGAAAATGGCTATACAAGAAACGTTACATaGTGTGAAGTTGAAGGGACCATGCACCATGTAATGTGGGCAACA | + |
|
Preference number: 1 (lower is better) Translates to: FSEWVRENGYTRNVT*CEVEGTMHHVMWAT Trigger: TGTTGCCCACATTACATGGTGCATGGTCCCTTCAACTTCACAGCATGTAACGTTTCTTGTATAGCCATTTTCTCTGACCCACTCTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR TCA 90 bp | TTTGTGCGCTCATTATACCACGAACATCCTAGGAAGAACATAACATaGACAAAGGGTGAAATCCCTTTCCAGGTGAGACATCTCCCTTTA | + |
|
Preference number: 1 (lower is better) Translates to: FVRSLYHEHPRKNIT*TKGEIPFQVRHLPL Trigger: TAAAGGGAGATGTCTCACCTGGAAAGGGATTTCACCCTTTGTTCATGTTATGTTCTTCCTAGGATGTTCGTGGTATAATGAGCGCACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR GCA 90 bp | GCAGTTTCTCTGACTGGCAAGTATTTAACAGAAGTGAAAACTCAATaGTACTGCTATGCTCTTTCAACCTACCAGGTAAATAAGGGACAC | + |
|
Preference number: 1 (lower is better) Translates to: AVSLTGKYLTEVKTQ*YCYALSTYQVNKGH Trigger: GTGTCCCTTATTTACCTGGTAGGTTGAAAGAGCATAGCAGTAGCATTGAGTTTTCACTTCTGTTAAATACTTGCCAGTCAGAGAAACTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR GCA 90 bp | TCTCTGACTGGCAAGTATTTAACAGAAGTGAAAACTCAATGCTACTaGTATGCTCTTTCAACCTACCAGGTAAATAAGGGACACCATTCT | + |
|
Preference number: 1 (lower is better) Translates to: SLTGKYLTEVKTQCY*YALSTYQVNKGHHS Trigger: AGAATGGTGTCCCTTATTTACCTGGTAGGTTGAAAGAGCATAGCAGTAGCATTGAGTTTTCACTTCTGTTAAATACTTGCCAGTCAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR TCA 90 bp | TATAATCAGGCTGATTTCTTCGTCATGAAGAGAGCAGTTGTAGTGTaGTCCAATTTACTTAGGTCATTGATTTTTGTGAGCCCTTTGGGT | + |
|
Preference number: 1 (lower is better) Translates to: YNQADFFVMKRAVVV*SNLLRSLIFVSPLG Trigger: ACCCAAAGGGCTCACAAAAATCAATGACCTAAGTAAATTGGATCACACTACAACTGCTCTCTTCATGACGAAGAAATCAGCCTGATTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR GCA 90 bp | GACCTCAACATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGTCAATGCTACTGCTATaGTCTTTCAACCTACCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: DLNMQRRKDICKHSCTNRSMLLL*SFNLPG Trigger: ACCTGGTAGGTTGAAAGAGCATAGCAGTAGCATTGA...CCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATGTTGAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR TCA 90 bp | CATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGCACACAAACTGATTCGGTTGAATTaGTTTCCCCTTTTTACCCTC | + |
|
Preference number: 2 (lower is better) Translates to: HAEAQGHLQALMHQQAHKLIRLN*FPLFTL Trigger: GAGGGTAAAAAGGGGAAATCAATTCAACCGAATCAG...TTTGTGTGCCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR GCA 90 bp | GACCTCAACATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGAAAACTCAATGCTACTaGTATGCTCTTTCAACCTAC | + |
|
Preference number: 2 (lower is better) Translates to: DLNMQRRKDICKHSCTNRKTQCY*YALSTY Trigger: GTAGGTTGAAAGAGCATAGCAGTAGCATTGAGTTTT...CCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATGTTGAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR GCA 90 bp | GACCTCAACATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGATGGAGAGAATAGCCTaGAAACAAGTTTTAAGTATG | + |
|
Preference number: 2 (lower is better) Translates to: DLNMQRRKDICKHSCTNRMERIA*KQVLSM Trigger: CATACTTAAAACTTGTTTGCAGGCTATTCTCTCCAT...CCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATGTTGAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR TCA 90 bp | ATTACATTTACACAGGGTCATTTTATTCATGGAGTGGGACAAATGGATTTCTCTAGGCAGAGGTCCCAGTaGGCCCCTCGTTCTCCTATC | + |
|
Preference number: 2 (lower is better) Translates to: ITFTQGHFIHGVGQMDFSRQRSQ*APRSPI Trigger: GATAGGAGAACGAGGGGCTCACTGGGACCTCTGCCT...AGAGAAATCCATTTGTCCCACTCCATGAATAAAATGACCCTGTGTAAATGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR TCA 90 bp | ACTCATGCACCAACAGGCACACAAACACACAAACACACAAATAGATTCCATAGCACGCGGGGAATAATATaGGAACTCCTGAGTTGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: THAPTGTQTHKHTNRFHSTRGII*ELLSCQ Trigger: CTGGCAACTCAGGAGTTCTCATATTATTCCCCGCGT...GCTATGGAATCTATTTGTGTGTTTGTGTGTTTGTGTGCCTGTTGGTGCATGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR CCA 90 bp | CATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGCACACAAACTTTACAAGTGTTCTTaGGTATTGAAAGTGGTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: HAEAQGHLQALMHQQAHKLYKCS*VLKVVD Trigger: ATCTACCACTTTCAATACCCAAGAACACTTGTAAAG...TTTGTGTGCCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR CAA 90 bp | GGTGAAATCCCTTTCCAGGTGAGACATCTCCCTTTACAAGTGTTCTaGGGTATTGAAAGTGGTAGATCAGAGAGACAGACCTTACTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: GEIPFQVRHLPLQVF*GIESGRSERQTLLG Trigger: ACCAAGTAAGGTCTGTCTCTCTGATCTACCACTTTCAATACCCAAGAACACTTGTAAAGGGAGATGTCTCACCTGGAAAGGGATTTCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR TCA 90 bp | ATTACATTTACACAGGGTCATTTTATTCATGGAGTGGGACAAATGGATTTCTCTAGACCTCGTTGTGTTTaGGCATTGCTATGTCGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: ITFTQGHFIHGVGQMDFSRPRCV*ALLCRV Trigger: CACCCGACATAGCAATGCTCAAACACAACGAGGTCT...AGAGAAATCCATTTGTCCCACTCCATGAATAAAATGACCCTGTGTAAATGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR CCA 90 bp | ACCTATCACAGAGCCAACATGAGTATTTGTGCGCTCATTATACCACGAACATCCTGCAGTTTCTCTGACTaGCAAGTATTTAACAGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: TYHRANMSICALIIPRTSCSFSD*QVFNRS Trigger: ACTTCTGTTAAATACTTGCCAGTCAGAGAAACTGCA...GGATGTTCGTGGTATAATGAGCGCACAAATACTCATGTTGGCTCTGTGATAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR GCA 90 bp | CTAAGCAGTGTGGTCACTGCTATAGAAAGAAATACAAACTATGAGCTAAAGATTATCTGCAAGCACTCATaGACCAACAGGCACACAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LSSVVTAIERNTNYELKIICKHS*TNRHTN Trigger: GTTTGTGTGCCTGTTGGTGCATGAGTGCTTGCAGAT...AATCTTTAGCTCATAGTTTGTATTTCTTTCTATAGCAGTGACCACACTGCTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR GCA 90 bp | ATTACATTTACACAGGGTCATTTTATTCATGGAGTGGGACAAATGGATTTCTCTGCTAAGTCCATTTCATaGTACTTTAGCCCGTCACAC | + |
|
Preference number: 2 (lower is better) Translates to: ITFTQGHFIHGVGQMDFSAKSIS*YFSPSH Trigger: GTGTGACGGGCTAAAGTAGCATGAAATGGACTTAGC...AGAGAAATCCATTTGTCCCACTCCATGAATAAAATGACCCTGTGTAAATGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTCATTTTATTCATGGAGTGGGACAAATGGATTTCTCTTCATAGGAAAATATCAACTGAAGAGCTGTaGAAGGCACCACATCTTACA | + |
|
Preference number: 2 (lower is better) Translates to: RVILFMEWDKWISLHRKISTEEL*KAPHLT Trigger: TGTAAGATGTGGTGCCTTCCACAGCTCTTCAGTTGA...TATTTTCCTATGAAGAGAAATCCATTTGTCCCACTCCATGAATAAAATGACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR TCA 90 bp | CTAAGCAGTGTGGTCACTGCTATAGAAAGAAATACAAACTATGAGCTAAAGATTTATTGCCCAGAATCATaGCCAGTTAGTCAGTGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LSSVVTAIERNTNYELKIYCPES*PVSQCF Trigger: GAAACACTGACTAACTGGTCATGATTCTGGGCAATA...AATCTTTAGCTCATAGTTTGTATTTCTTTCTATAGCAGTGACCACACTGCTTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR GCA 90 bp | ATTACATTTACACAGGGTCATTTTATTCATGGAGTGGGACAAATGGATTTCTCTGAAGTGAAAACTCAATaGTACTGCTATGCTCTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: ITFTQGHFIHGVGQMDFSEVKTQ*YCYALS Trigger: TGAAAGAGCATAGCAGTAGCATTGAGTTTTCACTTC...AGAGAAATCCATTTGTCCCACTCCATGAATAAAATGACCCTGTGTAAATGTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTCATTTTATTCATGGAGTGGGACAAATGGATTTCTCTTCATAGGAAAATATTTCATCTTCCAGTTTaGAGAAAAGCTGAGATACTT | + |
|
Preference number: 2 (lower is better) Translates to: RVILFMEWDKWISLHRKIFHLPV*RKAEIL Trigger: AAGTATCTCAGCTTTTCTCCAAACTGGAAGATGAAA...TATTTTCCTATGAAGAGAAATCCATTTGTCCCACTCCATGAATAAAATGACCCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR GCA 72 bp | AGCAACGAAGGTAGACATCAACTTCCGACCTCAACATaGAGAGGCGCAAGGACATCTGCAAGCACTCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: SNEGRHQLPTST*RGARTSASTHA Trigger: TGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATGTTGAGGTCGGAAGTTGATGTCTACCTTCGTTGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR TCA 72 bp | GTGTTTCCACAGAGCTCCCTGGCTAGTCTAGATAACTaGGCAACGAAGGTAGACATCAACTTCCGACCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: VFPQSSLASLDN*ATKVDINFRPQ Trigger: TTGAGGTCGGAAGTTGATGTCTACCTTCGTTGCTCAGTTATCTAGACTAGCCAGGGAGCTCTGTGGAAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR GCA 72 bp | GAGTTGCCAGGGATCATCACAGCTAAGTCCATTTCATaGTACTTTAGCCCGTCACACCTATCACAGAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: ELPGIITAKSIS*YFSPSHLSQSQ Trigger: TTGGCTCTGTGATAGGTGTGACGGGCTAAAGTAGCATGAAATGGACTTAGCTGTGATGATCCCTGGCAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR GCA 72 bp | AACATGCAGAGGCGCAAGGACATCTGCAAGCACTCATaGACCAACAGGCACACAAACACACAAACACACAAA | + |
|
Preference number: 3 (lower is better) Translates to: NMQRRKDICKHS*TNRHTNTQTHK Trigger: TTTGTGTGTTTGTGTGTTTGTGTGCCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR GCA 72 bp | CCGTCACACCTATCACAGAGCCAACATGAGTATTTGTaGGCTCATTATACCACGAACATCCTAGGAAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: PSHLSQSQHEYL*AHYTTNILGRT Trigger: TGTTCTTCCTAGGATGTTCGTGGTATAATGAGCGCACAAATACTCATGTTGGCTCTGTGATAGGTGTGACGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR CAA 90 bp | ACCTATCACAGAGCCAACATGAGTATTTGTGCGCTCATTATACCACGAACATCCCCCCTTTTTACCCTCTaGTACATTTCCAAACCATCC | + |
|
Preference number: 3 (lower is better) Translates to: TYHRANMSICALIIPRTSPLFTL*YISKPS Trigger: GGATGGTTTGGAAATGTACAAGAGGGTAAAAAGGGG...GGATGTTCGTGGTATAATGAGCGCACAAATACTCATGTTGGCTCTGTGATAGGT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR GCA 72 bp | TGGGTCAGAGAAAATGGCTATACAAGAAACGTTACATaGTGTGAAGTTGAAGGGACCATGCACCATGTAATG | + |
|
Preference number: 3 (lower is better) Translates to: WVRENGYTRNVT*CEVEGTMHHVM Trigger: CATTACATGGTGCATGGTCCCTTCAACTTCACAGCATGTAACGTTTCTTGTATAGCCATTTTCTCTGACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR TCA 72 bp | TCATTATACCACGAACATCCTAGGAAGAACATAACATaGACAAAGGGTGAAATCCCTTTCCAGGTGAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: SLYHEHPRKNIT*TKGEIPFQVRH Trigger: ATGTCTCACCTGGAAAGGGATTTCACCCTTTGTTCATGTTATGTTCTTCCTAGGATGTTCGTGGTATAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR TCA 72 bp | AGAACACACCCTGAATTCCATCTGATTCGGTTGAATTaGTTTCCCCTTTTTACCCTCTTGTACATTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: RTHPEFHLIRLN*FPLFTLLYISK Trigger: TTTGGAAATGTACAAGAGGGTAAAAAGGGGAAATCAATTCAACCGAATCAGATGGAATTCAGGGTGTGTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR TCA 72 bp | GCTGATTTCTTCGTCATGAAGAGAGCAGTTGTAGTGTaGTCCAATTTACTTAGGTCATTGATTTTTGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ADFFVMKRAVVV*SNLLRSLIFVS Trigger: GCTCACAAAAATCAATGACCTAAGTAAATTGGATCACACTACAACTGCTCTCTTCATGACGAAGAAATCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR GCA 72 bp | GGCAAGTATTTAACAGAAGTGAAAACTCAATGCTACTaGTATGCTCTTTCAACCTACCAGGTAAATAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GKYLTEVKTQCY*YALSTYQVNKG Trigger: TCCCTTATTTACCTGGTAGGTTGAAAGAGCATAGCAGTAGCATTGAGTTTTCACTTCTGTTAAATACTTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR GCA 72 bp | CTGACTGGCAAGTATTTAACAGAAGTGAAAACTCAATaGTACTGCTATGCTCTTTCAACCTACCAGGTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LTGKYLTEVKTQ*YCYALSTYQVN Trigger: ATTTACCTGGTAGGTTGAAAGAGCATAGCAGTAGCATTGAGTTTTCACTTCTGTTAAATACTTGCCAGTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR CCA 72 bp | GGTTCTATAAAGTCTCCAGAGCACAATGTGTTCCCATaGACTTCTCTTGTTAGTTCAATTAGACACTTATTG | + |
|
Preference number: 3 (lower is better) Translates to: GSIKSPEHNVFP*TSLVSSIRHLL Trigger: CAATAAGTGTCTAATTGAACTAACAAGAGAAGTCCATGGGAACACATTGTGCTCTGGAGACTTTATAGAACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR-3UTR CAA 90 bp | ATTACATTTACACAGGGTCATTTTATTCATGGAGTGGGACAAATGGATTTCTCTTCTGATTCGGTTGAATaGATTTCCCCTTTTTACCCT | + |
|
Preference number: 3 (lower is better) Translates to: ITFTQGHFIHGVGQMDFSSDSVE*ISPFYP Trigger: AGGGTAAAAAGGGGAAATCAATTCAACCGAATCAGA...AGAGAAATCCATTTGTCCCACTCCATGAATAAAATGACCCTGTGTAAATGTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR GCA 90 bp | CATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGCACACAAACCTCCCTGGCTCTCCTaGACAGCCTCACCCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: HAEAQGHLQALMHQQAHKPPWLS*TASPPQ Trigger: TTGTGGGGGTGAGGCTGTGCAGGAGAGCCAGGGAGG...TTTGTGTGCCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR CCA 90 bp | GACCTCAACATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGCCAGAGAGACCTCCCTaGCTCTCCTGCACAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLNMQRRKDICKHSCTNRPERPP*LSCTAS Trigger: TGAGGCTGTGCAGGAGAGCCAGGGAGGTCTCTCTGG...CCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATGTTGAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR TCA 90 bp | ACCTATCACAGAGCCAACATGAGTATTTGTGCGCTCATTATACCACGAACATCCCCAGCGCCTGGCTGCTaGGAGCGGGCGAACCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TYHRANMSICALIIPRTSPAPGC*ERANLR Trigger: ACGGAGGTTCGCCCGCTCTCAGCAGCCAGGCGCTGG...GGATGTTCGTGGTATAATGAGCGCACAAATACTCATGTTGGCTCTGTGATAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR GCA 90 bp | GACCTCAACATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGGGGACTCCCCATGTCTaGAACGGTGATGGTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: DLNMQRRKDICKHSCTNRGTPHV*NGDGDV Trigger: AACATCACCATCACCGTTGCAGACATGGGGAGTCCC...CCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATGTTGAGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR GCA 90 bp | GACCTCAACATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGTACCTCTCCATTGTGTaGCCACACACTGAACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DLNMQRRKDICKHSCTNRYLSIV*PHTEQP Trigger: GGGCTGTTCAGTGTGTGGGCACACAATGGAGAGGTA...CCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATGTTGAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR GCA 90 bp | CATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGCACACAAAAAGCATGGCTCTGTATaGCCACACAGTTTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HAEAQGHLQALMHQQAHKKHGSV*PHSFSL Trigger: CAGGGAAAAACTGTGTGGGCATACAGAGCCATGCTT...TTTGTGTGCCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR GCA 90 bp | CATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGCACACAAAGTTCAGGGTATTTCTTaGCATCGCTTCGTTTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HAEAQGHLQALMHQQAHKVQGIS*HRFVSE Trigger: CTCGGAAACGAAGCGATGGCAAGAAATACCCTGAAC...TTTGTGTGCCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR GCA 90 bp | GACCTCAACATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGGGTGATGTTGTATTCTaGTACACTCTCTCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLNMQRRKDICKHSCTNRGDVVF*YTLSVQ Trigger: CTGGACAGAGAGAGTGTAGCAGAATACAACATCACC...CCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATGTTGAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR TCA 90 bp | CATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGCACACAAACCTGCACTGTTAAGTTaGCTTGTGTTTTCAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HAEAQGHLQALMHQQAHKPALLS*LVFSGW Trigger: CCATCCTGAAAACACAAGTCAACTTAACAGTGCAGG...TTTGTGTGCCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR TCA 90 bp | ACCTATCACAGAGCCAACATGAGTATTTGTGCGCTCATTATACCACGAACATCCGCAGCAGCGAGTAAGTaGTGTGAGCATTGGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TYHRANMSICALIIPRTSAAASK*CEHWSL Trigger: CAGGCTCCAATGCTCACATCACTTACTCGCTGCTGC...GGATGTTCGTGGTATAATGAGCGCACAAATACTCATGTTGGCTCTGTGATAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR TCA 90 bp | CCATCTGATTCGGTTGAATTGATTTCCCCTTTTTACCCTCTTGTACATTTCCAAGCAGCACATGCAGTGTaGCACTGGCAGAGCGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSDSVELISPFYPLVHFQAAHAV*HWQSAE Trigger: CTCCGCGCTCTGCCAGTGTCACACTGCATGTGCTGC...TTGGAAATGTACAAGAGGGTAAAAAGGGGAAATCAATTCAACCGAATCAGATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR GCA 90 bp | CTAAGCAGTGTGGTCACTGCTATAGAAAGAAATACAAACTATGAGCTAAAGATTCAGGTATCCGGGCTCTaGCGCCCTGGGCAGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSVVTAIERNTNYELKIQVSGL*RPGQQL Trigger: GAGCTGCTGCCCAGGGCGGCAGAGCCCGGATACCTG...AATCTTTAGCTCATAGTTTGTATTTCTTTCTATAGCAGTGACCACACTGCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR CCA 90 bp | GACCTCAACATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGGTAGATCGTCCTGAATaGAACAACTTACTTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DLNMQRRKDICKHSCTNRVDRPE*NNLLSH Trigger: ATGGGAAAGTAAGTTGTTCCATTCAGGACGATCTAC...CCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATGTTGAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR CCA 90 bp | ATTACATTTACACAGGGTCATTTTATTCATGGAGTGGGACAAATGGATTTCTCTCGGGCTCTGCCGCCCTaGGCAGCAGCTCAGTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ITFTQGHFIHGVGQMDFSRALPP*AAAQCR Trigger: CCTACACTGAGCTGCTGCCCAGGGCGGCAGAGCCCG...AGAGAAATCCATTTGTCCCACTCCATGAATAAAATGACCCTGTGTAAATGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR TCA 90 bp | GACCTCAACATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGCTCTTGCTTCAATATTaGTTTCATAGGACTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DLNMQRRKDICKHSCTNRLLLQY*FHRTES Trigger: AGACTCAGTCCTATGAAATCAATATTGAAGCAAGAG...CCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATGTTGAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR GCA 90 bp | CATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGCACACAAAAATGGAGTTGGTAAATaGAGACAGGATAATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HAEAQGHLQALMHQQAHKNGVGK*RQDNLW Trigger: CCAGAGATTATCCTGTCTGCATTTACCAACTCCATT...TTTGTGTGCCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR CAA 72 bp | AGCCCGTCACACCTATCACAGAGCCAACATGAGTATTaGTGCGCTCATTATACCACGAACATCCTAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPSHLSQSQHEY*CAHYTTNILGR Trigger: TCTTCCTAGGATGTTCGTGGTATAATGAGCGCACAAATACTCATGTTGGCTCTGTGATAGGTGTGACGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR CCA 90 bp | CATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGCACACAAAATTTTCACCCATTTCTaGTCTAAAAGAATGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HAEAQGHLQALMHQQAHKIFTHF*SKRMVL Trigger: CAAGACCATTCTTTTAGACCAGAAATGGGTGAAAAT...TTTGTGTGCCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR CAA 72 bp | CCTTTCCAGGTGAGACATCTCCCTTTACAAGTGTTCTaGGGTATTGAAAGTGGTAGATCAGAGAGACAGACC | + |
|
Preference number: 4 (lower is better) Translates to: PFQVRHLPLQVF*GIESGRSERQT Trigger: GGTCTGTCTCTCTGATCTACCACTTTCAATACCCAAGAACACTTGTAAAGGGAGATGTCTCACCTGGAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR TCA 90 bp | AGGGTCATTTTATTCATGGAGTGGGACAAATGGATTTCTCTTCATAGGAAAATACTGAGTCTGTGGCACTaGTGGTGCCTATGTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RVILFMEWDKWISLHRKILSLWH*WCLCAG Trigger: CCCTGCACATAGGCACCATCAGTGCCACAGACTCAG...TATTTTCCTATGAAGAGAAATCCATTTGTCCCACTCCATGAATAAAATGACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR GCA 90 bp | CCATCTGATTCGGTTGAATTGATTTCCCCTTTTTACCCTCTTGTACATTTCCAACTGAGCACGAACAGCTaGCCATTGTCTGCGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PSDSVELISPFYPLVHFQLSTNS*PLSALM Trigger: CATCAACGCAGACAATGGGCAGCTGTTCGTGCTCAG...TTGGAAATGTACAAGAGGGTAAAAAGGGGAAATCAATTCAACCGAATCAGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR TCA 90 bp | ACCTATCACAGAGCCAACATGAGTATTTGTGCGCTCATTATACCACGAACATCCACTTCTAGCTCAGCTTaGAAAATATCCAAGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TYHRANMSICALIIPRTSTSSSA*KISKGL Trigger: CAACCCCTTGGATATTTTTCAAGCTGAGCTAGAAGT...GGATGTTCGTGGTATAATGAGCGCACAAATACTCATGTTGGCTCTGTGATAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR TCA 90 bp | AGGGTCATTTTATTCATGGAGTGGGACAAATGGATTTCTCTTCATAGGAAAATAAGCTCACTGTCCTCATaGTCAGGATCACGTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RVILFMEWDKWISLHRKISSLSS*SGSRAT Trigger: GGTGGCACGTGATCCTGATCATGAGGACAGTGAGCT...TATTTTCCTATGAAGAGAAATCCATTTGTCCCACTCCATGAATAAAATGACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR TCA 90 bp | ACCTATCACAGAGCCAACATGAGTATTTGTGCGCTCATTATACCACGAACATCCTTGGTTTCAGATATTTaGACTCACCAGTCCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TYHRANMSICALIIPRTSLVSDI*THQSQS Trigger: ACTCTGGGACTGGTGAGTTCAAATATCTGAAACCAA...GGATGTTCGTGGTATAATGAGCGCACAAATACTCATGTTGGCTCTGTGATAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR GCA 90 bp | AGGGTCATTTTATTCATGGAGTGGGACAAATGGATTTCTCTTCATAGGAAAATAATGATCAGGATCACGTaGCACCTCTGGCAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVILFMEWDKWISLHRKIMIRIT*HLWQRQ Trigger: CTGCCTCTGCCAGAGGTGGCACGTGATCCTGATCAT...TATTTTCCTATGAAGAGAAATCCATTTGTCCCACTCCATGAATAAAATGACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR CCA 90 bp | AGGGTCATTTTATTCATGGAGTGGGACAAATGGATTTCTCTTCATAGGAAAATATCTGTGGCACCCACATaGAATTCAAAGGCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVILFMEWDKWISLHRKISVAPT*NSKACR Trigger: CCTGCAGGCCTTTGAATTCCATGTGGGTGCCACAGA...TATTTTCCTATGAAGAGAAATCCATTTGTCCCACTCCATGAATAAAATGACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR TCA 90 bp | ACTCATGCACCAACAGGCACACAAACACACAAACACACAAATAGATTCCATAGCCTGATATCTTTAGCATaGTCTCTTTGTCCAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: THAPTGTQTHKHTNRFHSLISLA*SLCPGI Trigger: AATTCCTGGACAAAGAGATCATGCTAAAGATATCAG...GCTATGGAATCTATTTGTGTGTTTGTGTGTTTGTGTGCCTGTTGGTGCATGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR TCA 90 bp | CTAAGCAGTGTGGTCACTGCTATAGAAAGAAATACAAACTATGAGCTAAAGATTCGCTTCGTTTCCGAGTaGGCACTCGAAAATAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSSVVTAIERNTNYELKIRFVSE*ALENRN Trigger: ATTCCTATTTTCGAGTGCTCACTCGGAAACGAAGCG...AATCTTTAGCTCATAGTTTGTATTTCTTTCTATAGCAGTGACCACACTGCTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR CCA 90 bp | CCATCTGATTCGGTTGAATTGATTTCCCCTTTTTACCCTCTTGTACATTTCCAAAGGAATTCTGGTGAGTaGTCATTTATGTCTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PSDSVELISPFYPLVHFQRNSGE*SFMSVT Trigger: AGTCACAGACATAAATGACCACTCACCAGAATTCCT...TTGGAAATGTACAAGAGGGTAAAAAGGGGAAATCAATTCAACCGAATCAGATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR CCA 90 bp | CTAAGCAGTGTGGTCACTGCTATAGAAAGAAATACAAACTATGAGCTAAAGATTGATCAGAAAGCCTATTaGACTATCCTCAGGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSVVTAIERNTNYELKIDQKAY*TILRDL Trigger: CAGATCCCTGAGGATAGTCCAATAGGCTTTCTGATC...AATCTTTAGCTCATAGTTTGTATTTCTTTCTATAGCAGTGACCACACTGCTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR TCA 90 bp | CTAAGCAGTGTGGTCACTGCTATAGAAAGAAATACAAACTATGAGCTAAAGATTTGTTGTTCTCACGGATaGACATGGTATAGGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSSVVTAIERNTNYELKICCSHG*TWYRRF Trigger: AAACCTCCTATACCATGTTCATCCGTGAGAACAACA...AATCTTTAGCTCATAGTTTGTATTTCTTTCTATAGCAGTGACCACACTGCTTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| 3UTR CAA 72 bp | TCCAATTTACTTAGGTCATTGATTTTTGTGAGCCCTTaGGGTTATTTTCTAAGCAGTGTGGTCACTGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: SNLLRSLIFVSP*GYFLSSVVTAI Trigger: TATAGCAGTGACCACACTGCTTAGAAAATAACCCAAAGGGCTCACAAAAATCAATGACCTAAGTAAATTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR TCA 90 bp | AGGGTCATTTTATTCATGGAGTGGGACAAATGGATTTCTCTTCATAGGAAAATATGTCAAGGGGTGGATTaGAAATGTTTTGCTAATATC | + |
|
Preference number: 4 (lower is better) Translates to: RVILFMEWDKWISLHRKICQGVD*KCFANI Trigger: GATATTAGCAAAACATTTTCAATCCACCCCTTGACA...TATTTTCCTATGAAGAGAAATCCATTTGTCCCACTCCATGAATAAAATGACCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR GCA 90 bp | CTAAGCAGTGTGGTCACTGCTATAGAAAGAAATACAAACTATGAGCTAAAGATTTTGATGTCAGATACCTaGACTGTTAAGTTGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSVVTAIERNTNYELKILMSDT*TVKLTC Trigger: ACAAGTCAACTTAACAGTGCAGGTATCTGACATCAA...AATCTTTAGCTCATAGTTTGTATTTCTTTCTATAGCAGTGACCACACTGCTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR CCA 90 bp | ATTACATTTACACAGGGTCATTTTATTCATGGAGTGGGACAAATGGATTTCTCTGGTCTTTTACTAAATTaGTTACAAAGGACCTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: ITFTQGHFIHGVGQMDFSGLLLN*LQRTYP Trigger: AGGGTAGGTCCTTTGTAACCAATTTAGTAAAAGACC...AGAGAAATCCATTTGTCCCACTCCATGAATAAAATGACCCTGTGTAAATGTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR CAA 90 bp | GACCTCAACATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGTTGACTCCAATGTCCTaGTCTGTAGCAGAGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DLNMQRRKDICKHSCTNRLTPMS*SVAETV Trigger: CACTGTCTCTGCTACAGACAAGGACATTGGAGTCAA...CCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATGTTGAGGTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR CAA 90 bp | ACTCATGCACCAACAGGCACACAAACACACAAACACACAAATAGATTCCATAGCAGTATCAGCCTGTGCTaGTGCACATCGCGCTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: THAPTGTQTHKHTNRFHSSISLC*CTSRSL Trigger: GAGCGAGCGCGATGTGCACAAGCACAGGCTGATACT...GCTATGGAATCTATTTGTGTGTTTGTGTGTTTGTGTGCCTGTTGGTGCATGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR CAA 90 bp | CATGCAGAGGCGCAAGGACATCTGCAAGCACTCATGCACCAACAGGCACACAAAATTGGTTTCAGATATTaGAACTCACCAGTCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HAEAQGHLQALMHQQAHKIGFRY*NSPVPE Trigger: CTCTGGGACTGGTGAGTTCAAATATCTGAAACCAAT...TTTGTGTGCCTGTTGGTGCATGAGTGCTTGCAGATGTCCTTGCGCCTCTGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR CAA 90 bp | ACTCATGCACCAACAGGCACACAAACACACAAACACACAAATAGATTCCATAGCTGCAGGGCAGGGCTGTaGTTCTCACGGATGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: THAPTGTQTHKHTNRFHSCRAGL*FSRMNM Trigger: CATGTTCATCCGTGAGAACAACAGCCCTGCCCTGCA...GCTATGGAATCTATTTGTGTGTTTGTGTGTTTGTGTGCCTGTTGGTGCATGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR CAA 90 bp | ACTCATGCACCAACAGGCACACAAACACACAAACACACAAATAGATTCCATAGCGTGAAGATGGGGGCGTaGTCGTTGATGTCAGATACC | + |
|
Preference number: 5 (lower is better) Translates to: THAPTGTQTHKHTNRFHSVKMGA*SLMSDT Trigger: GGTATCTGACATCAACGACAACGCCCCCATCTTCAC...GCTATGGAATCTATTTGTGTGTTTGTGTGTTTGTGTGCCTGTTGGTGCATGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS-3UTR CAA 90 bp | ACCTATCACAGAGCCAACATGAGTATTTGTGCGCTCATTATACCACGAACATCCTTTTCAAGAATGGAGTaGGTAAATGCAGACAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: TYHRANMSICALIIPRTSFSRME*VNADRI Trigger: TATCCTGTCTGCATTTACCAACTCCATTCTTGAAAA...GGATGTTCGTGGTATAATGAGCGCACAAATACTCATGTTGGCTCTGTGATAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS CAA 72 bp | AGTGCCCTGAGCACGAACAGCTGCCCATTGTCTGCGTaGATGGAGATGAACGAGGCGAGGGCCAGCTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SALSTNSCPLSA*MEMNEARASWW Trigger: CCACCAGCTGGCCCTCGCCTCGTTCATCTCCATCAACGCAGACAATGGGCAGCTGTTCGTGCTCAGGGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||
| CDS TCA 72 bp | GCTATGACCAGGTACAATGTGAGCTCACTGTCCTCATaGTCAGGATCACGTGCCACCTCTGGCAGAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AMTRYNVSSLSS*SGSRATSGRGR Trigger: CCTGCCTCTGCCAGAGGTGGCACGTGATCCTGATCATGAGGACAGTGAGCTCACATTGTACCTGGTCATAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051442.7 |
||