Pregenerated sensors for PCDHB14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044043Ensembl transcript IDs: ENSMUST00000052387.5
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAGTTTTATGTGTGTGGGTACACATGGACACTGGAAGAGGGCAATaGATCTCCCTGAAGCTCGAATTAGAGTCTATTTGTGAGCCACCA | + |
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Preference number: 1 (lower is better) Translates to: SVLCVWVHMDTGRGQ*ISLKLELESICEPP Trigger: TGGTGGCTCACAAATAGACTCTAATTCGAGCTTCAGGGAGATCCATTGCCCTCTTCCAGTGTCCATGTGTACCCACACACATAAAACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR GCA 90 bp | GATTTCATCTTTCCTTACTCTGGGCAAGTAGTGAGGTTGATAGGTTaGTTGGGCTATGGTTTGTGTGTGCTCACTCATAATGCCACTGTA | + |
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Preference number: 1 (lower is better) Translates to: DFIFPYSGQVVRLIG*LGYGLCVLTHNATV Trigger: TACAGTGGCATTATGAGTGAGCACACACAAACCATAGCCCAAGCAACCTATCAACCTCACTACTTGCCCAGAGTAAGGAAAGATGAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CCA 90 bp | GGCTATGGTTTGTGTGTGCTCACTCATAATGCCACTGTACTTGAGTaGTTGTCAGAGACAACATTCAAGGAGTCTGTGTCCTTATTATTT | + |
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Preference number: 1 (lower is better) Translates to: GYGLCVLTHNATVLE*LSETTFKESVSLLF Trigger: AAATAATAAGGACACAGACTCCTTGAATGTTGTCTCTGACAACCACTCAAGTACAGTGGCATTATGAGTGAGCACACACAAACCATAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR TCA 90 bp | ATCTTATTATCTGCACATAGAAAGATGTCTCTTGCCCTATTTATATaGCATACAAGTGGTACTACAGTTACAGCCCATTTATGCTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: ILLSAHRKMSLALFI*HTSGTTVTAHLCSS Trigger: GGAAGAGCATAAATGGGCTGTAACTGTAGTACCACTTGTATGTCATATAAATAGGGCAAGAGACATCTTTCTATGTGCAGATAATAAGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR GCA 90 bp | AACAAGAACTTTCGAGACAGGAGTTCTGTGATTAAAAGAAATCAATaGACATGCTCAGAAACCAGGAGCCTGAAAATATCTCTTAACTTT | + |
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Preference number: 1 (lower is better) Translates to: NKNFRDRSSVIKRNQ*TCSETRSLKISLNF Trigger: AAAGTTAAGAGATATTTTCAGGCTCCTGGTTTCTGAGCATGTGCATTGATTTCTTTTAATCACAGAACTCCTGTCTCGAAAGTTCTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR-3UTR TCA 90 bp | GTGTGGGTACACATGGACACTGGAAGAGGGCAATGGATCTCCCTGAAGCTCGAAGAGACAGGAGTTCTGTaGTTAAAAGAAATCAATGCA | + |
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Preference number: 2 (lower is better) Translates to: VWVHMDTGRGQWISLKLEETGVL*LKEINA Trigger: TGCATTGATTTCTTTTAATCACAGAACTCCTGTCTC...TTCGAGCTTCAGGGAGATCCATTGCCCTCTTCCAGTGTCCATGTGTACCCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR-3UTR GCA 90 bp | CAGGTTCTTAGGCTTGGTGACAGTTGGCTTTACCCATCTCTCAAAGGCCCTTTAAGAAATCAATGCACATaGTCAGAAACCAGGAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: QVLRLGDSWLYPSLKGPLRNQCT*SETRSL Trigger: CAGGCTCCTGGTTTCTGAGCATGTGCATTGATTTCT...TAAAGGGCCTTTGAGAGATGGGTAAAGCCAACTGTCACCAAGCCTAAGAACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CAA 90 bp | GCTTGGGCTATGGTTTGTGTGTGCTCACTCATAATGCCACTGTACTaGAGTGGTTGTCAGAGACAACATTCAAGGAGTCTGTGTCCTTAT | + |
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Preference number: 2 (lower is better) Translates to: AWAMVCVCSLIMPLY*SGCQRQHSRSLCPY Trigger: ATAAGGACACAGACTCCTTGAATGTTGTCTCTGACAACCACTCAAGTACAGTGGCATTATGAGTGAGCACACACAAACCATAGCCCAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR-3UTR CCA 90 bp | CTCATAATGCCACTGTACTTGAGTGGTTGTCAGAGACAACATTCAAGGAGTCTGCTGAGCATCAGAAAATaGCAGAGCTCTGGATTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LIMPLYLSGCQRQHSRSLLSIRK*QSSGLR Trigger: CCTCAATCCAGAGCTCTGCCATTTTCTGATGCTCAG...CAGACTCCTTGAATGTTGTCTCTGACAACCACTCAAGTACAGTGGCATTATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CAA 90 bp | TTCATCTTTCCTTACTCTGGGCAAGTAGTGAGGTTGATAGGTTGCTaGGGCTATGGTTTGTGTGTGCTCACTCATAATGCCACTGTACTT | + |
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Preference number: 2 (lower is better) Translates to: FIFPYSGQVVRLIGC*GYGLCVLTHNATVL Trigger: AAGTACAGTGGCATTATGAGTGAGCACACACAAACCATAGCCCAAGCAACCTATCAACCTCACTACTTGCCCAGAGTAAGGAAAGATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CAA 90 bp | AGTGGTTGTCAGAGACAACATTCAAGGAGTCTGTGTCCTTATTATTaGTATGACCTGCAGATCAGACTCAGGTTCTTAGGCTTGGTGACA | + |
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Preference number: 2 (lower is better) Translates to: SGCQRQHSRSLCPYY*YDLQIRLRFLGLVT Trigger: TGTCACCAAGCCTAAGAACCTGAGTCTGATCTGCAGGTCATACAAATAATAAGGACACAGACTCCTTGAATGTTGTCTCTGACAACCACT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR-3UTR TCA 90 bp | CTCATAATGCCACTGTACTTGAGTGGTTGTCAGAGACAACATTCAAGGAGTCTGAATTACATGGGCCCATaGGAAAACTTACAGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LIMPLYLSGCQRQHSRSLNYMGP*ENLQKL Trigger: CAGCTTCTGTAAGTTTTCTCATGGGCCCATGTAATT...CAGACTCCTTGAATGTTGTCTCTGACAACCACTCAAGTACAGTGGCATTATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR-3UTR CCA 90 bp | GTCAGAGACAACATTCAAGGAGTCTGTGTCCTTATTATTTGTATGACCTGCAGAAGGCTTGGTGACAGTTaGCTTTACCCATCTCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: VRDNIQGVCVLIICMTCRRLGDS*LYPSLK Trigger: TTTGAGAGATGGGTAAAGCCAACTGTCACCAAGCCT...TCTGCAGGTCATACAAATAATAAGGACACAGACTCCTTGAATGTTGTCTCTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CAA 90 bp | TTCAGTCGTGGGGGATATACTGAGTGGCAAGGTACTGCCTCGGTTTaGTCTTCATCATGGAAAAAGAGAAAGTTATCTACAAGTCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: FSRGGYTEWQGTASV*SSSWKKRKLSTSQK Trigger: TTTTTGACTTGTAGATAACTTTCTCTTTTTCCATGATGAAGACAAAACCGAGGCAGTACCTTGCCACTCAGTATATCCCCCACGACTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR-3UTR TCA 90 bp | CTCATAATGCCACTGTACTTGAGTGGTTGTCAGAGACAACATTCAAGGAGTCTGTGTCACAAGCTTTTATaGCACAAGTATGGAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: LIMPLYLSGCQRQHSRSLCHKLL*HKYGIP Trigger: TGGAATTCCATACTTGTGTCATAAAAGCTTGTGACA...CAGACTCCTTGAATGTTGTCTCTGACAACCACTCAAGTACAGTGGCATTATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CAA 90 bp | TATGGTTTGTGTGTGCTCACTCATAATGCCACTGTACTTGAGTGGTaGTCAGAGACAACATTCAAGGAGTCTGTGTCCTTATTATTTGTA | + |
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Preference number: 2 (lower is better) Translates to: YGLCVLTHNATVLEW*SETTFKESVSLLFV Trigger: TACAAATAATAAGGACACAGACTCCTTGAATGTTGTCTCTGACAACCACTCAAGTACAGTGGCATTATGAGTGAGCACACACAAACCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGAGAGAGAGAGAATATGAAAATCTCTATAAGGAAGTAGCTTTCCCTTCCACCTCTTTCCACGAGTaGATGGTTGTGAAATTATAT | + |
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Preference number: 2 (lower is better) Translates to: REREREYENLYKEVAFPSTSFHE*MVVKLY Trigger: ATATAATTTCACAACCATTCACTCGTGGAAAGAGGT...GGAAGGGAAAGCTACTTCCTTATAGAGATTTTCATATTCTCTCTCTCTCTCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGAGAGAGAGAGAATATGAAAATCTCTATAAGGAAGTAGCTTTCCCTTCCTACCAAAGCCATTTCTaGAAAACTAGTCACAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: REREREYENLYKEVAFPSYQSHF*KTSHKC Trigger: ACACTTGTGACTAGTTTTTCAGAAATGGCTTTGGTA...GGAAGGGAAAGCTACTTCCTTATAGAGATTTTCATATTCTCTCTCTCTCTCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGAGAGAGAGAGAATATGAAAATCTCTATAAGGAAGTAGCTTTCCCTTCCCCTCAGGGAATACAATaGGATTGCATCTTAAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: REREREYENLYKEVAFPSPQGIQ*DCILKR Trigger: TCTTTTTAAGATGCAATCTCATTGTATTCCCTGAGG...GGAAGGGAAAGCTACTTCCTTATAGAGATTTTCATATTCTCTCTCTCTCTCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CAA 90 bp | TTCAGAGGACTGAACTTTTATTTCTTAGCACCCACTTTAAGAAAGTaGACTGAAGAATTTTATACCCAGCTAAACTACGCTTCTCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: FRGLNFYFLAPTLRK*TEEFYTQLNYASQS Trigger: TGACTGAGAAGCGTAGTTTAGCTGGGTATAAAATTCTTCAGTCAACTTTCTTAAAGTGGGTGCTAAGAAATAAAAGTTCAGTCCTCTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAATATGAAAATCTCTATAAGGAAGTAGCTTTCCCTTCCATTAAAAGAAATCAATaGACATGCTCAGAAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: REREREYENLYKEVAFPSIKRNQ*TCSETR Trigger: CCTGGTTTCTGAGCATGTGCATTGATTTCTTTTAAT...GGAAGGGAAAGCTACTTCCTTATAGAGATTTTCATATTCTCTCTCTCTCTCTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR-3UTR GCA 90 bp | AGAAATCAATGCACATGCTCAGAAACCAGGAGCCTGAAAATATCTCTTAACTTTCAAGAAAGAACATTTTaGAGCTATATTGTGTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: RNQCTCSETRSLKISLNFQERTF*SYIVCL Trigger: CAAGCACACAATATAGCTGCAAAATGTTCTTTCTTG...AAAGTTAAGAGATATTTTCAGGCTCCTGGTTTCTGAGCATGTGCATTGATTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CCA 72 bp | TCTCACGGTTCCAGGCTGTTGTCCATCCAGGTGGGGTaGCCAGGCTGGCAGGAGTTTGAAGTTGCTGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: SHGSRLLSIQVG*PGWQEFEVAGH Trigger: ATGACCAGCAACTTCAAACTCCTGCCAGCCTGGCCACCCCACCTGGATGGACAACAGCCTGGAACCGTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CCA 72 bp | TCCAGGCTGTTGTCCATCCAGGTGGGGTGGCCAGGCTaGCAGGAGTTTGAAGTTGCTGGTCATATGACATCC | + |
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Preference number: 3 (lower is better) Translates to: SRLLSIQVGWPG*QEFEVAGHMTS Trigger: GGATGTCATATGACCAGCAACTTCAAACTCCTGCCAGCCTGGCCACCCCACCTGGATGGACAACAGCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR-3UTR CAA 90 bp | CAGGTTCTTAGGCTTGGTGACAGTTGGCTTTACCCATCTCTCAAAGGCCCTTTAGTGAGCCACCAGACATaGGTGCTGAGAACTAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: QVLRLGDSWLYPSLKGPLVSHQT*VLRTKL Trigger: CAGCTTAGTTCTCAGCACCAATGTCTGGTGGCTCAC...TAAAGGGCCTTTGAGAGATGGGTAAAGCCAACTGTCACCAAGCCTAAGAACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CCA 72 bp | GCAGATCAGACTCAGGTTCTTAGGCTTGGTGACAGTTaGCTTTACCCATCTCTCAAAGGCCCTTTAACACGC | + |
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Preference number: 3 (lower is better) Translates to: ADQTQVLRLGDS*LYPSLKGPLTR Trigger: GCGTGTTAAAGGGCCTTTGAGAGATGGGTAAAGCCAACTGTCACCAAGCCTAAGAACCTGAGTCTGATCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR-3UTR CAA 90 bp | CAGGTTCTTAGGCTTGGTGACAGTTGGCTTTACCCATCTCTCAAAGGCCCTTTAGTGTGTGTGTGTGTGTaGCCTGTTAATGGACACCAA | + |
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Preference number: 3 (lower is better) Translates to: QVLRLGDSWLYPSLKGPLVCVCV*PVNGHQ Trigger: TTGGTGTCCATTAACAGGCAACACACACACACACAC...TAAAGGGCCTTTGAGAGATGGGTAAAGCCAACTGTCACCAAGCCTAAGAACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CCA 72 bp | TGTGTGTGGGTACACATGGACACTGGAAGAGGGCAATaGATCTCCCTGAAGCTCGAATTAGAGTCTATTTGT | + |
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Preference number: 3 (lower is better) Translates to: CVWVHMDTGRGQ*ISLKLELESIC Trigger: ACAAATAGACTCTAATTCGAGCTTCAGGGAGATCCATTGCCCTCTTCCAGTGTCCATGTGTACCCACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CCA 72 bp | CCAGAAACTCAGGCCAGATTTCATCTTTCCTTACTCTaGGCAAGTAGTGAGGTTGATAGGTTGCTTGGGCTA | + |
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Preference number: 3 (lower is better) Translates to: PETQARFHLSLL*ASSEVDRLLGL Trigger: TAGCCCAAGCAACCTATCAACCTCACTACTTGCCCAGAGTAAGGAAAGATGAAATCTGGCCTGAGTTTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR GCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTaGCTGTTAATGGACACCAAGTTCATTTTAGGGATG | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCVCVCVC*LLMDTKFILGM Trigger: CATCCCTAAAATGAACTTGGTGTCCATTAACAGGCAACACACACACACACACACACACACACACACACACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CCA 72 bp | GATATCAGTTTTATGTGTGTGGGTACACATGGACACTaGAAGAGGGCAATGGATCTCCCTGAAGCTCGAATT | + |
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Preference number: 3 (lower is better) Translates to: DISFMCVGTHGH*KRAMDLPEARI Trigger: AATTCGAGCTTCAGGGAGATCCATTGCCCTCTTCCAGTGTCCATGTGTACCCACACACATAAAACTGATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR GCA 72 bp | TACCCATCTCTCAAAGGCCCTTTAACACGCATTTTGTaGTGTTCTGCCTTCCTACAAATCTCCAGACTCTTA | + |
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Preference number: 3 (lower is better) Translates to: YPSLKGPLTRIL*CSAFLQISRLL Trigger: TAAGAGTCTGGAGATTTGTAGGAAGGCAGAACAGCACAAAATGCGTGTTAAAGGGCCTTTGAGAGATGGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR TCA 72 bp | ACAACATTCAAGGAGTCTGTGTCCTTATTATTTGTATaGCCTGCAGATCAGACTCAGGTTCTTAGGCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: TTFKESVSLLFV*PADQTQVLRLG Trigger: ACCAAGCCTAAGAACCTGAGTCTGATCTGCAGGTCATACAAATAATAAGGACACAGACTCCTTGAATGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR TCA 72 bp | AGCATCAGAAAATGGCAGAGCTCTGGATTGAGGTACTaGGAAATACCAGCAAAAGTAAGGATAGGAATTAGA | + |
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Preference number: 3 (lower is better) Translates to: SIRKWQSSGLRY*EIPAKVRIGIR Trigger: TCTAATTCCTATCCTTACTTTTGCTGGTATTTCTCAGTACCTCAATCCAGAGCTCTGCCATTTTCTGATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR TCA 72 bp | CCATGTATTCAATCCAGGATCCCAGACACAAAATTATaGTACCCACAGTGGGCAGACCTTTTTAGTTCAATT | + |
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Preference number: 3 (lower is better) Translates to: PCIQSRIPDTKL*YPQWADLFSSI Trigger: AATTGAACTAAAAAGGTCTGCCCACTGTGGGTATCATAATTTTGTGTCTGGGATCCTGGATTGAATACATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR GCA 72 bp | GACAGGAGTTCTGTGATTAAAAGAAATCAATGCACATaGTCAGAAACCAGGAGCCTGAAAATATCTCTTAAC | + |
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Preference number: 3 (lower is better) Translates to: DRSSVIKRNQCT*SETRSLKISLN Trigger: GTTAAGAGATATTTTCAGGCTCCTGGTTTCTGAGCATGTGCATTGATTTCTTTTAATCACAGAACTCCTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR GCA 72 bp | TTTCGAGACAGGAGTTCTGTGATTAAAAGAAATCAATaGACATGCTCAGAAACCAGGAGCCTGAAAATATCT | + |
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Preference number: 3 (lower is better) Translates to: FRDRSSVIKRNQ*TCSETRSLKIS Trigger: AGATATTTTCAGGCTCCTGGTTTCTGAGCATGTGCATTGATTTCTTTTAATCACAGAACTCCTGTCTCGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR TCA 72 bp | TCTGCACATAGAAAGATGTCTCTTGCCCTATTTATATaGCATACAAGTGGTACTACAGTTACAGCCCATTTA | + |
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Preference number: 3 (lower is better) Translates to: SAHRKMSLALFI*HTSGTTVTAHL Trigger: TAAATGGGCTGTAACTGTAGTACCACTTGTATGTCATATAAATAGGGCAAGAGACATCTTTCTATGTGCAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR TCA 72 bp | CTAGTAATAACAAGAACTTTCGAGACAGGAGTTCTGTaGTTAAAAGAAATCAATGCACATGCTCAGAAACCA | + |
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Preference number: 3 (lower is better) Translates to: LVITRTFETGVL*LKEINAHAQKP Trigger: TGGTTTCTGAGCATGTGCATTGATTTCTTTTAATCACAGAACTCCTGTCTCGAAAGTTCTTGTTATTACTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CCA 72 bp | TATGAAATAATATGGATGGCTCTAGTATGGGGAAACTaGGAATGTATTTCGAGTTTATCAGTTCATCTTGAT | + |
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Preference number: 3 (lower is better) Translates to: YEIIWMALVWGN*ECISSLSVHLD Trigger: ATCAAGATGAACTGATAAACTCGAAATACATTCCCAGTTTCCCCATACTAGAGCCATCCATATTATTTCATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR GCA 90 bp | TTATGTGTGTGGGTACACATGGACACTGGAAGAGGGCAATGGATCTCCCTGAAGATATCCGGGCTCCGCTaGCCTGGGCAGCAGCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: LCVWVHMDTGRGQWISLKISGLR*PGQQLS Trigger: ACTGAGCTGCTGCCCAGGGCAGCGGAGCCCGGATAT...CTTCAGGGAGATCCATTGCCCTCTTCCAGTGTCCATGTGTACCCACACACATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CCA 90 bp | GTGTGGGTACACATGGACACTGGAAGAGGGCAATGGATCTCCCTGAAGCTCGAATTGCGGGTGAGAAGGTaGAAATGGGCGTTGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VWVHMDTGRGQWISLKLELRVRR*KWALVL Trigger: CAGCACCAACGCCCATTTCCACCTTCTCACCCGCAA...TTCGAGCTTCAGGGAGATCCATTGCCCTCTTCCAGTGTCCATGTGTACCCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR TCA 90 bp | GTGTGGGTACACATGGACACTGGAAGAGGGCAATGGATCTCCCTGAAGCTCGAAGCAATACATGCAGTGTaGCACTGGCAGAGTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: VWVHMDTGRGQWISLKLEAIHAV*HWQSVE Trigger: CTCCACACTCTGCCAGTGTCACACTGCATGTATTGC...TTCGAGCTTCAGGGAGATCCATTGCCCTCTTCCAGTGTCCATGTGTACCCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CCA 90 bp | GTGTGGGTACACATGGACACTGGAAGAGGGCAATGGATCTCCCTGAAGCTCGAACTAACATCCACCAGGTaGCCAGGAAAGTGTCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: VWVHMDTGRGQWISLKLELTSTR*PGKCPS Trigger: TGAGGGACACTTTCCTGGCCACCTGGTGGATGTTAG...TTCGAGCTTCAGGGAGATCCATTGCCCTCTTCCAGTGTCCATGTGTACCCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR TCA 90 bp | TTATGTGTGTGGGTACACATGGACACTGGAAGAGGGCAATGGATCTCCCTGAAGCTGAGTCTGTGGCGCTaGTGGTGCCTATGTGCAATG | + |
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Preference number: 4 (lower is better) Translates to: LCVWVHMDTGRGQWISLKLSLWR*WCLCAM Trigger: CATTGCACATAGGCACCATCAGCGCCACAGACTCAG...CTTCAGGGAGATCCATTGCCCTCTTCCAGTGTCCATGTGTACCCACACACATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR GCA 90 bp | CCTGTCAAGCAAAGGAAAGTGGCCACACACCACACTGAGACCAATGAGATACAGTCTCCCCAGCCTTCCTaGACAGTCTTACTCCCACAA | + |
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Preference number: 4 (lower is better) Translates to: PVKQRKVATHHTETNEIQSPQPS*TVLLPQ Trigger: TTGTGGGAGTAAGACTGTGCAGGAAGGCTGGGGAGA...CTGTATCTCATTGGTCTCAGTGTGGTGTGTGGCCACTTTCCTTTGCTTGACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR GCA 90 bp | CAGGTTCTTAGGCTTGGTGACAGTTGGCTTTACCCATCTCTCAAAGGCCCTTTACTGAGCGCAAACAGCTaGCCATTGTCTGCGTTGATG | + |
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Preference number: 4 (lower is better) Translates to: QVLRLGDSWLYPSLKGPLLSANS*PLSALM Trigger: CATCAACGCAGACAATGGGCAGCTGTTTGCGCTCAG...TAAAGGGCCTTTGAGAGATGGGTAAAGCCAACTGTCACCAAGCCTAAGAACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR GCA 90 bp | GTCAGAGACAACATTCAAGGAGTCTGTGTCCTTATTATTTGTATGACCTGCAGAAGCAGGAGCAGCCTGTaGTTGGGCACATCGCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: VRDNIQGVCVLIICMTCRSRSSL*LGTSRS Trigger: CGAGCGCGATGTGCCCAAGCACAGGCTGCTCCTGCT...TCTGCAGGTCATACAAATAATAAGGACACAGACTCCTTGAATGTTGTCTCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAAAATCGTTGAGGGCCAGTTGTaGGTCATGGGGAGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RERERERERERERENMKIVEGQL*VMGRQQ Trigger: CTGCTGCCTCCCCATGACCCACAACTGGCCCTCAAC...GATTTTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR TCA 90 bp | GTCAGAGACAACATTCAAGGAGTCTGTGTCCTTATTATTTGTATGACCTGCAGACCCAGTCTTGGGAGGTaGCCCACTGTCCATAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VRDNIQGVCVLIICMTCRPSLGR*PTVHSR Trigger: ACGGCTATGGACAGTGGGTCACCTCCCAAGACTGGG...TCTGCAGGTCATACAAATAATAAGGACACAGACTCCTTGAATGTTGTCTCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CCA 90 bp | CCTGTCAAGCAAAGGAAAGTGGCCACACACCACACTGAGACCAATGAGATACAGTGGAAACACGGCACCTaGAAGGCTGCTTTCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PVKQRKVATHHTETNEIQWKHGT*KAAFQN Trigger: ATTTTGGAAAGCAGCCTTCCAGGTGCCGTGTTTCCA...CTGTATCTCATTGGTCTCAGTGTGGTGTGTGGCCACTTTCCTTTGCTTGACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CCA 90 bp | CAGGTTCTTAGGCTTGGTGACAGTTGGCTTTACCCATCTCTCAAAGGCCCTTTAACCACAATGACAACCTaGGTAGTCCCAGTCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVLRLGDSWLYPSLKGPLTTMTT*VVPVLG Trigger: TCCCAAGACTGGGACTACCCAGGTTGTCATTGTGGT...TAAAGGGCCTTTGAGAGATGGGTAAAGCCAACTGTCACCAAGCCTAAGAACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CCA 90 bp | CAGGTTCTTAGGCTTGGTGACAGTTGGCTTTACCCATCTCTCAAAGGCCCTTTAGACACTGGCAGAGTGTaGAGGTTCTCCATTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVLRLGDSWLYPSLKGPLDTGRV*RFSIVL Trigger: AAGGACAATGGAGAACCTCCACACTCTGCCAGTGTC...TAAAGGGCCTTTGAGAGATGGGTAAAGCCAACTGTCACCAAGCCTAAGAACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CAA 72 bp | CCTTACTCTGGGCAAGTAGTGAGGTTGATAGGTTGCTaGGGCTATGGTTTGTGTGTGCTCACTCATAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PYSGQVVRLIGC*GYGLCVLTHNA Trigger: GGCATTATGAGTGAGCACACACAAACCATAGCCCAAGCAACCTATCAACCTCACTACTTGCCCAGAGTAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR TCA 90 bp | GTCAGAGACAACATTCAAGGAGTCTGTGTCCTTATTATTTGTATGACCTGCAGACGCTGTGATTGCGGGTaGGAAGGTGGAAATGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VRDNIQGVCVLIICMTCRRCDCG*EGGNGR Trigger: ACGCCCATTTCCACCTTCTCACCCGCAATCACAGCG...TCTGCAGGTCATACAAATAATAAGGACACAGACTCCTTGAATGTTGTCTCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAAAATCCTCTTCTGCTCCAGCTaGAGGAGCTGTTTGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RERERERERERERENMKILFCSS*RSCLFP Trigger: AGGGAACAAACAGCTCCTGCAGCTGGAGCAGAAGAG...GATTTTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR GCA 90 bp | GTCAGAGACAACATTCAAGGAGTCTGTGTCCTTATTATTTGTATGACCTGCAGAGCTCTGGATATTTCCTaGCGTCGCTGTGATTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRDNIQGVCVLIICMTCRALDIS*RRCDCG Trigger: CCCGCAATCACAGCGACGGCAGGAAATATCCAGAGC...TCTGCAGGTCATACAAATAATAAGGACACAGACTCCTTGAATGTTGTCTCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CCA 90 bp | GTGTGGGTACACATGGACACTGGAAGAGGGCAATGGATCTCCCTGAAGCTCGAACTTTTTAGTAACACCTaGAAATGTAGGATACACGGA | + |
|
Preference number: 4 (lower is better) Translates to: VWVHMDTGRGQWISLKLELFSNT*KCRIHG Trigger: TCCGTGTATCCTACATTTCCAGGTGTTACTAAAAAG...TTCGAGCTTCAGGGAGATCCATTGCCCTCTTCCAGTGTCCATGTGTACCCACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR TCA 90 bp | GTCAGAGACAACATTCAAGGAGTCTGTGTCCTTATTATTTGTATGACCTGCAGACTTGAGCAGTTGGAATaGCAGCCAGGCATTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRDNIQGVCVLIICMTCRLEQLE*QPGILS Trigger: GGACAGAATGCCTGGCTGTCATTCCAACTGCTCAAG...TCTGCAGGTCATACAAATAATAAGGACACAGACTCCTTGAATGTTGTCTCTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR TCA 90 bp | AGAAATCAATGCACATGCTCAGAAACCAGGAGCCTGAAAATATCTCTTAACTTTCAGGCTCCGTGGTCTTaGGCAGTTGGAATGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RNQCTCSETRSLKISLNFQAPWS*AVGMTA Trigger: GGCTGTCATTCCAACTGCTCAAGACCACGGAGCCTG...AAAGTTAAGAGATATTTTCAGGCTCCTGGTTTCTGAGCATGTGCATTGATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CCA 90 bp | CAGGTTCTTAGGCTTGGTGACAGTTGGCTTTACCCATCTCTCAAAGGCCCTTTATTGAGCTATTTTCAATaGAAACACGGCACCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVLRLGDSWLYPSLKGPLLSYFQ*KHGTWK Trigger: CTTCCAGGTGCCGTGTTTCCATTGAAAATAGCTCAA...TAAAGGGCCTTTGAGAGATGGGTAAAGCCAACTGTCACCAAGCCTAAGAACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CAA 72 bp | CTTTACCCATCTCTCAAAGGCCCTTTAACACGCATTTaGTGCTGTTCTGCCTTCCTACAAATCTCCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LYPSLKGPLTRI*CCSAFLQISRL Trigger: GAGTCTGGAGATTTGTAGGAAGGCAGAACAGCACAAAATGCGTGTTAAAGGGCCTTTGAGAGATGGGTAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CAA 72 bp | GATTTCATCTTTCCTTACTCTGGGCAAGTAGTGAGGTaGATAGGTTGCTTGGGCTATGGTTTGTGTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DFIFPYSGQVVR*IGCLGYGLCVL Trigger: GAGCACACACAAACCATAGCCCAAGCAACCTATCAACCTCACTACTTGCCCAGAGTAAGGAAAGATGAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR TCA 90 bp | CAGGTTCTTAGGCTTGGTGACAGTTGGCTTTACCCATCTCTCAAAGGCCCTTTAGAATTTCATCTTCCATaGATTCTGGGGCATGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: QVLRLGDSWLYPSLKGPLEFHLP*ILGHDH Trigger: ATGATCATGCCCCAGAATTCATGGAAGATGAAATTC...TAAAGGGCCTTTGAGAGATGGGTAAAGCCAACTGTCACCAAGCCTAAGAACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR TCA 90 bp | CTCATAATGCCACTGTACTTGAGTGGTTGTCAGAGACAACATTCAAGGAGTCTGAATGGGCGTTGGTGCTaGTTGTATAGTTTTGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: LIMPLYLSGCQRQHSRSLNGRWC*LYSFEP Trigger: CGGTTCAAAACTATACAATCAGCACCAACGCCCATT...CAGACTCCTTGAATGTTGTCTCTGACAACCACTCAAGTACAGTGGCATTATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CAA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGCCTGTTAATGGACACCAAGTTCATTTTAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCV*PVNGHQVHFRD Trigger: ATCCCTAAAATGAACTTGGTGTCCATTAACAGGCAACACACACACACACACACACACACACACACACACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CAA 72 bp | ATGGTTTGTGTGTGCTCACTCATAATGCCACTGTACTaGAGTGGTTGTCAGAGACAACATTCAAGGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MVCVCSLIMPLY*SGCQRQHSRSL Trigger: CAGACTCCTTGAATGTTGTCTCTGACAACCACTCAAGTACAGTGGCATTATGAGTGAGCACACACAAACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CCA 90 bp | GTCAGAGACAACATTCAAGGAGTCTGTGTCCTTATTATTTGTATGACCTGCAGAGTGAGAAGGTGGAAATaGGCGTTGGTGCTGATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VRDNIQGVCVLIICMTCRVRRWK*ALVLIV Trigger: TACAATCAGCACCAACGCCCATTTCCACCTTCTCAC...TCTGCAGGTCATACAAATAATAAGGACACAGACTCCTTGAATGTTGTCTCTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CAA 72 bp | CAGAGACAACATTCAAGGAGTCTGTGTCCTTATTATTaGTATGACCTGCAGATCAGACTCAGGTTCTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QRQHSRSLCPYY*YDLQIRLRFLG Trigger: GCCTAAGAACCTGAGTCTGATCTGCAGGTCATACAAATAATAAGGACACAGACTCCTTGAATGTTGTCTCTG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CAA 72 bp | GGGGGATATACTGAGTGGCAAGGTACTGCCTCGGTTTaGTCTTCATCATGGAAAAAGAGAAAGTTATCTACA | + |
|
Preference number: 4 (lower is better) Translates to: GGYTEWQGTASV*SSSWKKRKLST Trigger: TGTAGATAACTTTCTCTTTTTCCATGATGAAGACAAAACCGAGGCAGTACCTTGCCACTCAGTATATCCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CCA 90 bp | CTCATAATGCCACTGTACTTGAGTGGTTGTCAGAGACAACATTCAAGGAGTCTGTTCAGGGGAGTTTTCTaGAATTTCGCTGATAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LIMPLYLSGCQRQHSRSLFRGVF*NFADKY Trigger: GTACTTATCAGCGAAATTCCAGAAAACTCCCCTGAA...CAGACTCCTTGAATGTTGTCTCTGACAACCACTCAAGTACAGTGGCATTATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CCA 90 bp | GTCAGAGACAACATTCAAGGAGTCTGTGTCCTTATTATTTGTATGACCTGCAGAAAAGGAAGACGGTCTTaGACGGAGCACACCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VRDNIQGVCVLIICMTCRKGRRS*TEHTIF Trigger: AAAAATGGTGTGCTCCGTCCAAGACCGTCTTCCTTT...TCTGCAGGTCATACAAATAATAAGGACACAGACTCCTTGAATGTTGTCTCTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR TCA 90 bp | GACGAATCCCACCAAGAAAGAACATTTTGCAGCTATATTGTGTGCTTGAGGGAAAGCTGTATTTCCCCTTaGATAAATTGCACTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: DESHQERTFCSYIVCLRESCISP*INCTGL Trigger: AAGTCCAGTGCAATTTATTCAAGGGGAAATACAGCT...TTCCCTCAAGCACACAATATAGCTGCAAAATGTTCTTTCTTGGTGGGATTCGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR GCA 90 bp | AGAAATCAATGCACATGCTCAGAAACCAGGAGCCTGAAAATATCTCTTAACTTTATAATGGCGGTCACTTaGCTTTTCTGTGGTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RNQCTCSETRSLKISLNFIMAVT*LFCGAL Trigger: CAAGGCACCACAGAAAAGGCAAGTGACCGCCATTAT...AAAGTTAAGAGATATTTTCAGGCTCCTGGTTTCTGAGCATGTGCATTGATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR GCA 90 bp | AGAAATCAATGCACATGCTCAGAAACCAGGAGCCTGAAAATATCTCTTAACTTTAAATTTCCACTCTTCTaGTCCAGCTGCAGGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RNQCTCSETRSLKISLNFKFPLF*SSCRSC Trigger: ACAGCTCCTGCAGCTGGAGCAGAAGAGTGGAAATTT...AAAGTTAAGAGATATTTTCAGGCTCCTGGTTTCTGAGCATGTGCATTGATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CAA 72 bp | TTCCACTCACTTCTGGCATGTAAGAAGATGTACCAGTaGTCCTTCTTTGAAACTGGTCATCATTACTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FHSLLACKKMYQ*SFFETGHHYSF Trigger: AAAAGAGTAATGATGACCAGTTTCAAAGAAGGACAACTGGTACATCTTCTTACATGCCAGAAGTGAGTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| 3UTR CAA 72 bp | TTCTGGCATGTAAGAAGATGTACCAGTTGTCCTTCTTaGAAACTGGTCATCATTACTCTTTTTAACCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FWHVRRCTSCPS*KLVIITLFNLF Trigger: GAAGAGGTTAAAAAGAGTAATGATGACCAGTTTCAAAGAAGGACAACTGGTACATCTTCTTACATGCCAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CAA 90 bp | CAGGTTCTTAGGCTTGGTGACAGTTGGCTTTACCCATCTCTCAAAGGCCCTTTATCCACAGCCACCACCTaGGTGACCAGATATCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QVLRLGDSWLYPSLKGPLSTATT*VTRYPG Trigger: GCCCGGATATCTGGTCACCAAGGTGGTGGCTGTGGA...TAAAGGGCCTTTGAGAGATGGGTAAAGCCAACTGTCACCAAGCCTAAGAACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CAA 90 bp | TTATGTGTGTGGGTACACATGGACACTGGAAGAGGGCAATGGATCTCCCTGAAGGGTTCTCCATTGTCCTaGACCAGCAGGAGCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LCVWVHMDTGRGQWISLKGSPLS*TSRSSL Trigger: CAGGCTGCTCCTGCTGGTCAAGGACAATGGAGAACC...CTTCAGGGAGATCCATTGCCCTCTTCCAGTGTCCATGTGTACCCACACACATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CAA 90 bp | CAGGTTCTTAGGCTTGGTGACAGTTGGCTTTACCCATCTCTCAAAGGCCCTTTAGATAATGGCGGTCACTaGCCTTTTCTGTGGTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QVLRLGDSWLYPSLKGPLDNGGH*PFLWCL Trigger: AAGGCACCACAGAAAAGGCAAGTGACCGCCATTATC...TAAAGGGCCTTTGAGAGATGGGTAAAGCCAACTGTCACCAAGCCTAAGAACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CAA 90 bp | CCTGTCAAGCAAAGGAAAGTGGCCACACACCACACTGAGACCAATGAGATACAGCACAGGACTGTTCTCTaGAACTTGCACCTCATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PVKQRKVATHHTETNEIQHRTVL*NLHLIE Trigger: CTCTATGAGGTGCAAGTTCAAGAGAACAGTCCTGTG...CTGTATCTCATTGGTCTCAGTGTGGTGTGTGGCCACTTTCCTTTGCTTGACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CAA 90 bp | CTCATAATGCCACTGTACTTGAGTGGTTGTCAGAGACAACATTCAAGGAGTCTGGTGAAGGCAGGGGCGTaGTCATTGATGTCAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: LIMPLYLSGCQRQHSRSLVKAGA*SLMSDT Trigger: GGTGTCTGACATCAATGACAACGCCCCTGCCTTCAC...CAGACTCCTTGAATGTTGTCTCTGACAACCACTCAAGTACAGTGGCATTATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CAA 90 bp | AGAAATCAATGCACATGCTCAGAAACCAGGAGCCTGAAAATATCTCTTAACTTTCGAGTTGAGGGCCAGTaGTGGGTCATGGGGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RNQCTCSETRSLKISLNFRVEGQ*WVMGRQ Trigger: CTGCCTCCCCATGACCCACAACTGGCCCTCAACTCG...AAAGTTAAGAGATATTTTCAGGCTCCTGGTTTCTGAGCATGTGCATTGATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CAA 90 bp | AGAAATCAATGCACATGCTCAGAAACCAGGAGCCTGAAAATATCTCTTAACTTTCCAGGCTCCGTGGTCTaGAGCAGTTGGAATGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RNQCTCSETRSLKISLNFPGSVV*SSWNDS Trigger: GCTGTCATTCCAACTGCTCAAGACCACGGAGCCTGG...AAAGTTAAGAGATATTTTCAGGCTCCTGGTTTCTGAGCATGTGCATTGATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CAA 90 bp | GTCAGAGACAACATTCAAGGAGTCTGTGTCCTTATTATTTGTATGACCTGCAGAGAAAGGAAGACGGTCTaGGACGGAGCACACCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: VRDNIQGVCVLIICMTCRERKTV*DGAHHF Trigger: AAAATGGTGTGCTCCGTCCAAGACCGTCTTCCTTTC...TCTGCAGGTCATACAAATAATAAGGACACAGACTCCTTGAATGTTGTCTCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CAA 90 bp | AGAAATCAATGCACATGCTCAGAAACCAGGAGCCTGAAAATATCTCTTAACTTTATGGAGATGAGCGAGTaGAGGGCCAGTTGTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RNQCTCSETRSLKISLNFMEMSE*RASCGS Trigger: TGACCCACAACTGGCCCTCAACTCGCTCATCTCCAT...AAAGTTAAGAGATATTTTCAGGCTCCTGGTTTCTGAGCATGTGCATTGATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGAGAGAATATGAAAATCTCTATAAGGAAGTAGCTTTCCCTTCCAAGCTGTATTTCCCCTaGAATAAATTGCACTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: REREREYENLYKEVAFPSKLYFP*NKLHWT Trigger: AGTCCAGTGCAATTTATTCAAGGGGAAATACAGCTT...GGAAGGGAAAGCTACTTCCTTATAGAGATTTTCATATTCTCTCTCTCTCTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
||
| CDS-3UTR CAA 90 bp | AGAAATCAATGCACATGCTCAGAAACCAGGAGCCTGAAAATATCTCTTAACTTTCCTTCATTCAAAAAGTaGGGAAGTACTGGTTTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RNQCTCSETRSLKISLNFPSFKK*GSTGLR Trigger: TCTTAAACCAGTACTTCCCAACTTTTTGAATGAAGG...AAAGTTAAGAGATATTTTCAGGCTCCTGGTTTCTGAGCATGTGCATTGATTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
||
| CDS GCA 72 bp | GATATCCGGGCTCCGCTGCCCTGGGCAGCAGCTCAGTaGAAGGCGCAGAAGCGTTCTGCATCGGGTAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: DIRAPLPWAAAQ*KAQKRSASGRA Trigger: TGCTCTACCCGATGCAGAACGCTTCTGCGCCTTGCACTGAGCTGCTGCCCAGGGCAGCGGAGCCCGGATATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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| CDS GCA 72 bp | CAGAGCAGCCACCCAGAGAAGTCTCCCCAGCCTTCCTaGACAGTCTTACTCCCACAAACAGCAGCACAGACA | + |
|
Preference number: 6 (lower is better) Translates to: QSSHPEKSPQPS*TVLLPQTAAQT Trigger: TGTCTGTGCTGCTGTTTGTGGGAGTAAGACTGTGCAGGAAGGCTGGGGAGACTTCTCTGGGTGGCTGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
||
| CDS CAA 72 bp | TCCAGGACCACAATGACAACCTGGGTAGTCCCAGTCTaGGGAGGTGACCCACTGTCCATAGCCGTGAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SRTTMTTWVVPV*GGDPLSIAVSV Trigger: AACACTCACGGCTATGGACAGTGGGTCACCTCCCAAGACTGGGACTACCCAGGTTGTCATTGTGGTCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
||
| CDS GCA 72 bp | TCCCACAGCAGTAACAGAAAGATAATGGCGGTCACTTaGCTTTTCTGTGGTGCCTTGTGGAGTGATGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SHSSNRKIMAVT*LFCGALWSDVS Trigger: GGAGACATCACTCCACAAGGCACCACAGAAAAGGCAAGTGACCGCCATTATCTTTCTGTTACTGCTGTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
||
| CDS CAA 90 bp | TTTCTCCGGTGTCTGTATTTACTTCAAAAGCCTGTAGAACTTGATTaGATGATTGAAAAAGCGAATAGGAGAGCTCTCCGTGTGTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FLRCLYLLQKPVELD*MIEKANRRALRVSQ Trigger: CTGGGACACACGGAGAGCTCTCCTATTCGCTTTTTCAATCATCAAATCAAGTTCTACAGGCTTTTGAAGTAAATACAGACACCGGAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
||
| CDS CAA 72 bp | TGTCTGTATTTACTTCAAAAGCCTGTAGAACTTGATTaGATGATTGAAAAAGCGAATAGGAGAGCTCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: CLYLLQKPVELD*MIEKANRRALR Trigger: ACGGAGAGCTCTCCTATTCGCTTTTTCAATCATCAAATCAAGTTCTACAGGCTTTTGAAGTAAATACAGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052387.5 |
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