Pregenerated sensors for PCDHAC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000103255Ensembl transcript IDs: ENSMUST00000007584.4
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTTGAGCGGCCCCAGAGCGTGCAGGCAGGCCACCATCCTGAGCAGTaGGCACCAGCAGGTGGGTGTCCCGCTGCTCTCGATCCAGCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LERPQSVQAGHHPEQ*APAGGCPAALDPAL Trigger: AAGCGCTGGATCGAGAGCAGCGGGACACCCACCTGCTGGTGCTCACTGCTCAGGATGGTGGCCTGCCTGCACGCTCTGGGGCCGCTCAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 90 bp | TCCCGGTTCCGTCTCCTCCAACACCGAATACTCCAGCTGTCCCGCTaGAGCACCACAAGAGACCCACCAACACAGAACCGCCATTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRFRLLQHRILQLSR*STTRDPPTQNRHSP Trigger: TGGGGAATGGCGGTTCTGTGTTGGTGGGTCTCTTGTGGTGCTGCAGCGGGACAGCTGGAGTATTCGGTGTTGGAGGAGACGGAACCGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 90 bp | TGTGCATGCCTGCTCTTAGCGAGGCAGAGTAGCGCCAGTCAGGGTTaGGCTGCCGGGGCACGGCTTCCACATTTGAATGATCCCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CACLLLARQSSASQG*AAGARLPHLNDPLS Trigger: GGAAAGGGGATCATTCAAATGTGGAAGCCGTGCCCCGGCAGCCCAACCCTGACTGGCGCTACTCTGCCTCGCTAAGAGCAGGCATGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 90 bp | CTCATCGGCATCTTGGGCATTCGGAAGAATGAACCGGGCTCCCGGTaGCAGGAACTCCGGGATGTGCAAGTGCACATCTCCAGCAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LIGILGIRKNEPGSR*QELRDVQVHISSRE Trigger: TTCCCTGCTGGAGATGTGCACTTGCACATCCCGGAGTTCCTGCCACCGGGAGCCCGGTTCATTCTTCCGAATGCCCAAGATGCCGATGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 90 bp | ACAACTGCTCGCGGTCCGCTAGCTCTTGAACCACCAAGCTACCGCTaGCCAGGTCGACCCCGAAGTAGGACTCTCTGTAGTTGGAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TTARGPLALEPPSYR*PGRPRSRTLCSWKG Trigger: TCCTTTCCAACTACAGAGAGTCCTACTTCGGGGTCGACCTGGGCAGCGGTAGCTTGGTGGTTCAAGAGCTAGCGGACCGCGAGCAGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 90 bp | GCCAGGCATTGGAACCACTGTCTGCATCCTCTGCTACCACTTTTGTaGCTAGGTGTCCAGCTCGGGCAAAGCGGGGCACTCTTTCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ARHWNHCLHPLLPLL*LGVQLGQSGALFPL Trigger: CAGTGGAAAGAGTGCCCCGCTTTGCCCGAGCTGGACACCTAGTCACAAAAGTGGTAGCAGAGGATGCAGACAGTGGTTCCAATGCCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 90 bp | AGAATGAACCGGGCTCCCGGTGGCAGGAACTCCGGGATGTGCAAGTaGACATCTCCAGCAGGGAAGAGAGGTGAATTGTCGTTGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RMNRAPGGRNSGMCK*TSPAGKRGELSLVS Trigger: AGACACCAACGACAATTCACCTCTCTTCCCTGCTGGAGATGTGCACTTGCACATCCCGGAGTTCCTGCCACCGGGAGCCCGGTTCATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 90 bp | TTCGGAAGAATGAACCGGGCTCCCGGTGGCAGGAACTCCGGGATGTaGAAGTGCACATCTCCAGCAGGGAAGAGAGGTGAATTGTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FGRMNRAPGGRNSGM*KCTSPAGKRGELSL Trigger: CAACGACAATTCACCTCTCTTCCCTGCTGGAGATGTGCACTTGCACATCCCGGAGTTCCTGCCACCGGGAGCCCGGTTCATTCTTCCGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 90 bp | GTACTTAATGGGGGTGAGCCACCGTCTGAAGCAGAGATCAGGATCTaGTATTCACTTGCTTGCTCCCGATCCAGGGGCCCATCGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLNGGEPPSEAEIRI*YSLACSRSRGPSVS Trigger: GCTGACCGATGGGCCCCTGGATCGGGAGCAAGCAAGTGAATACCAGATCCTGATCTCTGCTTCAGACGGTGGCTCACCCCCATTAAGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 90 bp | AGCTACCGCTGCCCAGGTCGACCCCGAAGTAGGACTCTCTGTAGTTaGAAAGGAAGCGAAAGTTCCGCAAGGACAGAACAGCTGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: SYRCPGRPRSRTLCS*KGSESSARTEQLLT Trigger: TGTCAGCAGCTGTTCTGTCCTTGCGGAACTTTCGCTTCCTTTCCAACTACAGAGAGTCCTACTTCGGGGTCGACCTGGGCAGCGGTAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 90 bp | TGTGCAGCTCTAGAGGGTCCTCAAACATTAGCTCATATGTCAGGATaGAAGAAGCTTTGGCCGGGCACAACTGCTCGCGGTCCGCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CAALEGPQTLAHMSG*KKLWPGTTARGPLA Trigger: AGCTAGCGGACCGCGAGCAGTTGTGCCCGGCCAAAGCTTCTTGCATCCTGACATATGAGCTAATGTTTGAGGACCCTCTAGAGCTGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 90 bp | GAGGGTCCTCAAACATTAGCTCATATGTCAGGATGCAAGAAGCTTTaGCCGGGCACAACTGCTCGCGGTCCGCTAGCTCTTGAACCACCA | + |
|
Preference number: 5 (lower is better) Translates to: EGPQTLAHMSGCKKL*PGTTARGPLALEPP Trigger: TGGTGGTTCAAGAGCTAGCGGACCGCGAGCAGTTGTGCCCGGCCAAAGCTTCTTGCATCCTGACATATGAGCTAATGTTTGAGGACCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 90 bp | GTAGTTGGAAAGGAAGCGAAAGTTCCGCAAGGACAGAACAGCTGCTaGCAGCTTCAAGTCCGAGGCGATATTGCCTACAGTAACTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VVGKEAKVPQGQNSC*QLQVRGDIAYSNSR Trigger: CCGGGAGTTACTGTAGGCAATATCGCCTCGGACTTGAAGCTGTCAGCAGCTGTTCTGTCCTTGCGGAACTTTCGCTTCCTTTCCAACTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 90 bp | CCGGGCAGAAAGCTGTGCTCTTGGTTCCCAGATATCTTCAAAGTCTaGAATGACCTGAGGAGCTGCGTTGCTCAACAGCACACCCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PGRKLCSWFPDIFKV*NDLRSCVAQQHTQN Trigger: ATTCTGGGTGTGCTGTTGAGCAACGCAGCTCCTCAGGTCATTCCAGACTTTGAAGATATCTGGGAACCAAGAGCACAGCTTTCTGCCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 90 bp | GAGTACCAGACTTCTCCATTGGATCCTTCATCCGGATCCAAGGCTTaGACGTGGAATAGCACAGTTCCATTGGGTGCAGTCTCTGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: EYQTSPLDPSSGSKA*TWNSTVPLGAVSGT Trigger: GGTTCCAGAGACTGCACCCAATGGAACTGTGCTATTCCACGTTCAAGCCTTGGATCCGGATGAAGGATCCAATGGAGAAGTCTGGTACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 90 bp | AGCTGTGCTCTTGGTTCCCAGATATCTTCAAAGTCTGGAATGACCTaGGGAGCTGCGTTGCTCAACAGCACACCCAGAATAACAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SCALGSQISSKSGMT*GAALLNSTPRITEE Trigger: CTCCTCTGTTATTCTGGGTGTGCTGTTGAGCAACGCAGCTCCTCAGGTCATTCCAGACTTTGAAGATATCTGGGAACCAAGAGCACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 90 bp | GCTCTGCTGGTGTGCTATTGCTTAAGGAGTACCAGACTTCTCCATTaGATCCTTCATCCGGATCCAAGGCTTGAACGTGGAATAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: ALLVCYCLRSTRLLH*ILHPDPRLERGIAQ Trigger: CTGTGCTATTCCACGTTCAAGCCTTGGATCCGGATGAAGGATCCAATGGAGAAGTCTGGTACTCCTTAAGCAATAGCACACCAGCAGAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 90 bp | CTGCTCAAAGTCAAAGGAAGTTTTGGCAGTGATAACACCAGTGGTTaGTTCCACTGCCACCAAGCTGGAGGAAACTGGCATCCGTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLKVKGSFGSDNTSG*FHCHQAGGNWHPFR Trigger: TCTGAACGGATGCCAGTTTCCTCCAGCTTGGTGGCAGTGGAACCAACCACTGGTGTTATCACTGCCAAAACTTCCTTTGACTTTGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 90 bp | GTCAAAGGAAGTTTTGGCAGTGATAACACCAGTGGTTGGTTCCACTaGCACCAAGCTGGAGGAAACTGGCATCCGTTCAGAAATGACATC | + |
|
Preference number: 5 (lower is better) Translates to: VKGSFGSDNTSGWFH*HQAGGNWHPFRNDI Trigger: GATGTCATTTCTGAACGGATGCCAGTTTCCTCCAGCTTGGTGGCAGTGGAACCAACCACTGGTGTTATCACTGCCAAAACTTCCTTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 90 bp | ATGCCACCATCTCGGCCTTCCACTTGGAAGTTAAACCCCCTGAGCTaGTCAAAGTCAAAGGAAGTTTTGGCAGTGATAACACCAGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: MPPSRPSTWKLNPLS*SKSKEVLAVITPVV Trigger: AACCACTGGTGTTATCACTGCCAAAACTTCCTTTGACTTTGAGCAGCTCAGGGGGTTTAACTTCCAAGTGGAAGGCCGAGATGGTGGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 90 bp | TGCATTGTCATTCCTGTCTACCACAAACAAGTTCACAGTCACTGTTaGACTTCTGGGAGGAATGCCACCATCTCGGCCTTCCACTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CIVIPVYHKQVHSHC*TSGRNATISAFHLE Trigger: TTCCAAGTGGAAGGCCGAGATGGTGGCATTCCTCCCAGAAGTGCAACAGTGACTGTGAACTTGTTTGTGGTAGACAGGAATGACAATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 90 bp | TGTGCAAGTGCACATCTCCAGCAGGGAAGAGAGGTGAATTGTCGTTaGTGTCTAGAAGGTGAACACGTATTTTGTGCAGCTCTAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CASAHLQQGREVNCR*CLEGEHVFCAALEG Trigger: ACCCTCTAGAGCTGCACAAAATACGTGTTCACCTTCTAGACACCAACGACAATTCACCTCTCTTCCCTGCTGGAGATGTGCACTTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 90 bp | CAGGGCTATTATCAAGTACAAGTTCCGGGCAGAAAGCTGTGCTCTTaGTTCCCAGATATCTTCAAAGTCTGGAATGACCTGAGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QGYYQVQVPGRKLCS*FPDIFKVWNDLRSC Trigger: GCAGCTCCTCAGGTCATTCCAGACTTTGAAGATATCTGGGAACCAAGAGCACAGCTTTCTGCCCGGAACTTGTACTTGATAATAGCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 90 bp | TCTCCAGCAGGGAAGAGAGGTGAATTGTCGTTGGTGTCTAGAAGGTaGACACGTATTTTGTGCAGCTCTAGAGGGTCCTCAAACATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPAGKRGELSLVSRR*TRILCSSRGSSNIS Trigger: GCTAATGTTTGAGGACCCTCTAGAGCTGCACAAAATACGTGTTCACCTTCTAGACACCAACGACAATTCACCTCTCTTCCCTGCTGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 90 bp | ATATGTCTGAGAAAGTCTCTCGACTGTGGTGACATCTATTGTGGCTaGTGTCACCCAAGGACTAGAAGCCATCGTCCTCTTGTGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ICLRKSLDCGDIYCG*CHPRTRSHRPLVSL Trigger: GAGAGACACAAGAGGACGATGGCTTCTAGTCCTTGGGTGACATCAGCCACAATAGATGTCACCACAGTCGAGAGACTTTCTCAGACATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 90 bp | GATAACACCAGTGGTTGGTTCCACTGCCACCAAGCTGGAGGAAACTaGCATCCGTTCAGAAATGACATCCAACAGCTCATAAAAGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: DNTSGWFHCHQAGGN*HPFRNDIQQLIKDK Trigger: TTTGTCTTTTATGAGCTGTTGGATGTCATTTCTGAACGGATGCCAGTTTCCTCCAGCTTGGTGGCAGTGGAACCAACCACTGGTGTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 90 bp | CACTGGGATAGAGCCATTTCTAGGCAAGGGAAACAAGATGTCTGGTaGATTGTCATTCCTGTCTACCACAAACAAGTTCACAGTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: HWDRAISRQGKQDVW*IVIPVYHKQVHSHC Trigger: ACAGTGACTGTGAACTTGTTTGTGGTAGACAGGAATGACAATGCACCAGACATCTTGTTTCCCTTGCCTAGAAATGGCTCTATCCCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 90 bp | TCTCTCATTTTCTGGAGAATGACAGAAGTTCTGAGAGCAACAATCTaGGCTCTGGTTCAACTTGATGCACACAAAGAAAAACAAGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: SLIFWRMTEVLRATI*ALVQLDAHKEKQAP Trigger: GGGTGCTTGTTTTTCTTTGTGTGCATCAAGTTGAACCAGAGCCCAGATTGTTGCTCTCAGAACTTCTGTCATTCTCCAGAAAATGAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 72 bp | TTGGCCGGGCACAACTGCTCGCGGTCCGCTAGCTCTTaGACCACCAAGCTACCGCTGCCCAGGTCGACCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LAGHNCSRSASS*TTKLPLPRSTP Trigger: CGGGGTCGACCTGGGCAGCGGTAGCTTGGTGGTTCAAGAGCTAGCGGACCGCGAGCAGTTGTGCCCGGCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 72 bp | CCCCAGAGCGTGCAGGCAGGCCACCATCCTGAGCAGTaGGCACCAGCAGGTGGGTGTCCCGCTGCTCTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: PQSVQAGHHPEQ*APAGGCPAALD Trigger: ATCGAGAGCAGCGGGACACCCACCTGCTGGTGCTCACTGCTCAGGATGGTGGCCTGCCTGCACGCTCTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 72 bp | GCATTGTCGTTGGTGTCCACCACAGTGATAGTGACTTaGGCGGCCCCAGAGCGTGCAGGCAGGCCACCATCC | + |
|
Preference number: 6 (lower is better) Translates to: ALSLVSTTVIVT*AAPERAGRPPS Trigger: GGATGGTGGCCTGCCTGCACGCTCTGGGGCCGCTCAAGTCACTATCACTGTGGTGGACACCAACGACAATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 72 bp | CGCGGTCCGCTAGCTCTTGAACCACCAAGCTACCGCTaGCCAGGTCGACCCCGAAGTAGGACTCTCTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RGPLALEPPSYR*PGRPRSRTLCS Trigger: ACTACAGAGAGTCCTACTTCGGGGTCGACCTGGGCAGCGGTAGCTTGGTGGTTCAAGAGCTAGCGGACCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 72 bp | CGGGCTCCCGGTGGCAGGAACTCCGGGATGTGCAAGTaGACATCTCCAGCAGGGAAGAGAGGTGAATTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: RAPGGRNSGMCK*TSPAGKRGELS Trigger: CGACAATTCACCTCTCTTCCCTGCTGGAGATGTGCACTTGCACATCCCGGAGTTCCTGCCACCGGGAGCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 72 bp | TGCTTCCCTCATCGGCATCTTGGGCATTCGGAAGAATaGACCGGGCTCCCGGTGGCAGGAACTCCGGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: CFPHRHLGHSEE*TGLPVAGTPGC Trigger: ACATCCCGGAGTTCCTGCCACCGGGAGCCCGGTTCATTCTTCCGAATGCCCAAGATGCCGATGAGGGAAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 72 bp | CGTCTCCTCCAACACCGAATACTCCAGCTGTCCCGCTaGAGCACCACAAGAGACCCACCAACACAGAACCGC | + |
|
Preference number: 6 (lower is better) Translates to: RLLQHRILQLSR*STTRDPPTQNR Trigger: GCGGTTCTGTGTTGGTGGGTCTCTTGTGGTGCTGCAGCGGGACAGCTGGAGTATTCGGTGTTGGAGGAGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 72 bp | ATGAACCGGGCTCCCGGTGGCAGGAACTCCGGGATGTaGAAGTGCACATCTCCAGCAGGGAAGAGAGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: MNRAPGGRNSGM*KCTSPAGKRGE Trigger: TTCACCTCTCTTCCCTGCTGGAGATGTGCACTTGCACATCCCGGAGTTCCTGCCACCGGGAGCCCGGTTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 72 bp | GGGGGTGAGCCACCGTCTGAAGCAGAGATCAGGATCTaGTATTCACTTGCTTGCTCCCGATCCAGGGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GGEPPSEAEIRI*YSLACSRSRGP Trigger: TGGGCCCCTGGATCGGGAGCAAGCAAGTGAATACCAGATCCTGATCTCTGCTTCAGACGGTGGCTCACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 72 bp | CTGCTCTTAGCGAGGCAGAGTAGCGCCAGTCAGGGTTaGGCTGCCGGGGCACGGCTTCCACATTTGAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: LLLARQSSASQG*AAGARLPHLND Trigger: ATCATTCAAATGTGGAAGCCGTGCCCCGGCAGCCCAACCCTGACTGGCGCTACTCTGCCTCGCTAAGAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 72 bp | TGCATTGTCGTTGGTGTCCACCACAGTGATAGTGACTaGAGCGGCCCCAGAGCGTGCAGGCAGGCCACCATC | + |
|
Preference number: 6 (lower is better) Translates to: CIVVGVHHSDSD*SGPRACRQATI Trigger: GATGGTGGCCTGCCTGCACGCTCTGGGGCCGCTCAAGTCACTATCACTGTGGTGGACACCAACGACAATGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 90 bp | GGGGTGAGCCACCGTCTGAAGCAGAGATCAGGATCTGGTATTCACTaGCTTGCTCCCGATCCAGGGGCCCATCGGTCAGCAGTCTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: GVSHRLKQRSGSGIH*LAPDPGAHRSAVCS Trigger: ACTACAGACTGCTGACCGATGGGCCCCTGGATCGGGAGCAAGCAAGTGAATACCAGATCCTGATCTCTGCTTCAGACGGTGGCTCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 72 bp | ATCTTGGGCATTCGGAAGAATGAACCGGGCTCCCGGTaGCAGGAACTCCGGGATGTGCAAGTGCACATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ILGIRKNEPGSR*QELRDVQVHIS Trigger: GGAGATGTGCACTTGCACATCCCGGAGTTCCTGCCACCGGGAGCCCGGTTCATTCTTCCGAATGCCCAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 72 bp | TGGAACCACTGTCTGCATCCTCTGCTACCACTTTTGTaGCTAGGTGTCCAGCTCGGGCAAAGCGGGGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: WNHCLHPLLPLL*LGVQLGQSGAL Trigger: GAGTGCCCCGCTTTGCCCGAGCTGGACACCTAGTCACAAAAGTGGTAGCAGAGGATGCAGACAGTGGTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 72 bp | CAACAGCACACCCAGAATAACAGAGGAGGAAAGCGGTaGCTCTCCGTGGTCCTGAACCACTACCACCACGCT | + |
|
Preference number: 6 (lower is better) Translates to: QQHTQNNRGGKR*LSVVLNHYHHA Trigger: AGCGTGGTGGTAGTGGTTCAGGACCACGGAGAGCCACCGCTTTCCTCCTCTGTTATTCTGGGTGTGCTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 72 bp | CACCGTCTGAAGCAGAGATCAGGATCTGGTATTCACTaGCTTGCTCCCGATCCAGGGGCCCATCGGTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HRLKQRSGSGIH*LAPDPGAHRSA Trigger: TGCTGACCGATGGGCCCCTGGATCGGGAGCAAGCAAGTGAATACCAGATCCTGATCTCTGCTTCAGACGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 72 bp | TCTGAAGCAGAGATCAGGATCTGGTATTCACTTGCTTaGTCCCGATCCAGGGGCCCATCGGTCAGCAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SEAEIRIWYSLA*SRSRGPSVSSL Trigger: CAGACTGCTGACCGATGGGCCCCTGGATCGGGAGCAAGCAAGTGAATACCAGATCCTGATCTCTGCTTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 90 bp | CGCAAGGACAGAACAGCTGCTGACAGCTTCAAGTCCGAGGCGATATaGCCTACAGTAACTCCCGGTTCCGTCTCCTCCAACACCGAATAC | + |
|
Preference number: 6 (lower is better) Translates to: RKDRTAADSFKSEAI*PTVTPGSVSSNTEY Trigger: GTATTCGGTGTTGGAGGAGACGGAACCGGGAGTTACTGTAGGCAATATCGCCTCGGACTTGAAGCTGTCAGCAGCTGTTCTGTCCTTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 90 bp | TCCTGCCGGATGGAGATGATTGCAGGAGATCCTGGGATAATGAATTaGTCTGGCAACTCACCGGGACCGGACTGTTTGGGGTTGCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SCRMEMIAGDPGIMN*SGNSPGPDCLGLPG Trigger: ACCAGGCAACCCCAAACAGTCCGGTCCCGGTGAGTTGCCAGACAAATTCATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 72 bp | GTCAGGGTTGGGCTGCCGGGGCACGGCTTCCACATTTaGATGATCCCCTTTCCTATTCCGAATCTGAACACA | + |
|
Preference number: 6 (lower is better) Translates to: VRVGLPGHGFHI*MIPFPIPNLNT Trigger: TGTGTTCAGATTCGGAATAGGAAAGGGGATCATTCAAATGTGGAAGCCGTGCCCCGGCAGCCCAACCCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 72 bp | AGAACAGCTGCTGACAGCTTCAAGTCCGAGGCGATATaGCCTACAGTAACTCCCGGTTCCGTCTCCTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: RTAADSFKSEAI*PTVTPGSVSSN Trigger: GTTGGAGGAGACGGAACCGGGAGTTACTGTAGGCAATATCGCCTCGGACTTGAAGCTGTCAGCAGCTGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 72 bp | AGTCAGGGTTGGGCTGCCGGGGCACGGCTTCCACATTaGAATGATCCCCTTTCCTATTCCGAATCTGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: SQGWAAGARLPH*NDPLSYSESEH Trigger: GTGTTCAGATTCGGAATAGGAAAGGGGATCATTCAAATGTGGAAGCCGTGCCCCGGCAGCCCAACCCTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 72 bp | CAAACATTAGCTCATATGTCAGGATGCAAGAAGCTTTaGCCGGGCACAACTGCTCGCGGTCCGCTAGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QTLAHMSGCKKL*PGTTARGPLAL Trigger: AAGAGCTAGCGGACCGCGAGCAGTTGTGCCCGGCCAAAGCTTCTTGCATCCTGACATATGAGCTAATGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 72 bp | TCAAACATTAGCTCATATGTCAGGATGCAAGAAGCTTaGGCCGGGCACAACTGCTCGCGGTCCGCTAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SNISSYVRMQEA*AGHNCSRSASS Trigger: AGAGCTAGCGGACCGCGAGCAGTTGTGCCCGGCCAAAGCTTCTTGCATCCTGACATATGAGCTAATGTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 90 bp | CCTGGGATAATGAATTTGTCTGGCAACTCACCGGGACCGGACTGTTaGGGGTTGCCTGGTCCGTATTTAAAGGTCCAGCTGTTGCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PGIMNLSGNSPGPDC*GLPGPYLKVQLLLL Trigger: CAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAGTCCGGTCCCGGTGAGTTGCCAGACAAATTCATTATCCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 90 bp | ATAATGAATTTGTCTGGCAACTCACCGGGACCGGACTGTTTGGGGTaGCCTGGTCCGTATTTAAAGGTCCAGCTGTTGCTGTTGACACCG | + |
|
Preference number: 6 (lower is better) Translates to: IMNLSGNSPGPDCLG*PGPYLKVQLLLLTP Trigger: CGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAGTCCGGTCCCGGTGAGTTGCCAGACAAATTCATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 72 bp | AAGGAAGCGAAAGTTCCGCAAGGACAGAACAGCTGCTaGCAGCTTCAAGTCCGAGGCGATATTGCCTACAGT | + |
|
Preference number: 6 (lower is better) Translates to: KEAKVPQGQNSC*QLQVRGDIAYS Trigger: ACTGTAGGCAATATCGCCTCGGACTTGAAGCTGTCAGCAGCTGTTCTGTCCTTGCGGAACTTTCGCTTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 72 bp | GTGCTCTTGGTTCCCAGATATCTTCAAAGTCTGGAATaGCCTGAGGAGCTGCGTTGCTCAACAGCACACCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLLVPRYLQSLE*PEELRCSTAHP Trigger: TGGGTGTGCTGTTGAGCAACGCAGCTCCTCAGGTCATTCCAGACTTTGAAGATATCTGGGAACCAAGAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 72 bp | AGTTTTGGCAGTGATAACACCAGTGGTTGGTTCCACTaGCACCAAGCTGGAGGAAACTGGCATCCGTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SFGSDNTSGWFH*HQAGGNWHPFR Trigger: TCTGAACGGATGCCAGTTTCCTCCAGCTTGGTGGCAGTGGAACCAACCACTGGTGTTATCACTGCCAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 90 bp | CACTGTTGCACTTCTGGGAGGAATGCCACCATCTCGGCCTTCCACTaGGAAGTTAAACCCCCTGAGCTGCTCAAAGTCAAAGGAAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: HCCTSGRNATISAFH*EVKPPELLKVKGSF Trigger: AAAACTTCCTTTGACTTTGAGCAGCTCAGGGGGTTTAACTTCCAAGTGGAAGGCCGAGATGGTGGCATTCCTCCCAGAAGTGCAACAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 90 bp | GTGCATTGTCATTCCTGTCTACCACAAACAAGTTCACAGTCACTGTaGCACTTCTGGGAGGAATGCCACCATCTCGGCCTTCCACTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VHCHSCLPQTSSQSL*HFWEECHHLGLPLG Trigger: TCCAAGTGGAAGGCCGAGATGGTGGCATTCCTCCCAGAAGTGCAACAGTGACTGTGAACTTGTTTGTGGTAGACAGGAATGACAATGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 72 bp | ACTTCTCCATTGGATCCTTCATCCGGATCCAAGGCTTaGACGTGGAATAGCACAGTTCCATTGGGTGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: TSPLDPSSGSKA*TWNSTVPLGAV Trigger: GACTGCACCCAATGGAACTGTGCTATTCCACGTTCAAGCCTTGGATCCGGATGAAGGATCCAATGGAGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 72 bp | CGTGAAAGAGGTGCCTCAGCTCTGCTGGTGTGCTATTaGTTAAGGAGTACCAGACTTCTCCATTGGATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RERGASALLVCY*LRSTRLLHWIL Trigger: AAGGATCCAATGGAGAAGTCTGGTACTCCTTAAGCAATAGCACACCAGCAGAGCTGAGGCACCTCTTTCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 72 bp | GATGTACGTGAAAGAGGTGCCTCAGCTCTGCTGGTGTaGTATTGCTTAAGGAGTACCAGACTTCTCCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: DVRERGASALLV*YCLRSTRLLHW Trigger: CCAATGGAGAAGTCTGGTACTCCTTAAGCAATAGCACACCAGCAGAGCTGAGGCACCTCTTTCACGTACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 72 bp | AGTGGTTGGTTCCACTGCCACCAAGCTGGAGGAAACTaGCATCCGTTCAGAAATGACATCCAACAGCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: SGWFHCHQAGGN*HPFRNDIQQLI Trigger: TATGAGCTGTTGGATGTCATTTCTGAACGGATGCCAGTTTCCTCCAGCTTGGTGGCAGTGGAACCAACCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 72 bp | GTCAAAGGAAGTTTTGGCAGTGATAACACCAGTGGTTaGTTCCACTGCCACCAAGCTGGAGGAAACTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VKGSFGSDNTSG*FHCHQAGGNWH Trigger: ATGCCAGTTTCCTCCAGCTTGGTGGCAGTGGAACCAACCACTGGTGTTATCACTGCCAAAACTTCCTTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 90 bp | ACTTGGAAGTTAAACCCCCTGAGCTGCTCAAAGTCAAAGGAAGTTTaGGCAGTGATAACACCAGTGGTTGGTTCCACTGCCACCAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TWKLNPLSCSKSKEV*AVITPVVGSTATKL Trigger: CAGCTTGGTGGCAGTGGAACCAACCACTGGTGTTATCACTGCCAAAACTTCCTTTGACTTTGAGCAGCTCAGGGGGTTTAACTTCCAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 72 bp | GGGAAGAGAGGTGAATTGTCGTTGGTGTCTAGAAGGTaGACACGTATTTTGTGCAGCTCTAGAGGGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GKRGELSLVSRR*TRILCSSRGSS Trigger: TGAGGACCCTCTAGAGCTGCACAAAATACGTGTTCACCTTCTAGACACCAACGACAATTCACCTCTCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 72 bp | CTTGGTTCCCAGATATCTTCAAAGTCTGGAATGACCTaGGGAGCTGCGTTGCTCAACAGCACACCCAGAATA | + |
|
Preference number: 6 (lower is better) Translates to: LGSQISSKSGMT*GAALLNSTPRI Trigger: TATTCTGGGTGTGCTGTTGAGCAACGCAGCTCCTCAGGTCATTCCAGACTTTGAAGATATCTGGGAACCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 72 bp | AGAAAGTCTCTCGACTGTGGTGACATCTATTGTGGCTaGTGTCACCCAAGGACTAGAAGCCATCGTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RKSLDCGDIYCG*CHPRTRSHRPL Trigger: AAGAGGACGATGGCTTCTAGTCCTTGGGTGACATCAGCCACAATAGATGTCACCACAGTCGAGAGACTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 72 bp | CCAGATATCTTCAAAGTCTGGAATGACCTGAGGAGCTaGGTTGCTCAACAGCACACCCAGAATAACAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PDIFKVWNDLRS*VAQQHTQNNRG Trigger: TCCTCTGTTATTCTGGGTGTGCTGTTGAGCAACGCAGCTCCTCAGGTCATTCCAGACTTTGAAGATATCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 72 bp | GCACATCTCCAGCAGGGAAGAGAGGTGAATTGTCGTTaGTGTCTAGAAGGTGAACACGTATTTTGTGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AHLQQGREVNCR*CLEGEHVFCAA Trigger: AGCTGCACAAAATACGTGTTCACCTTCTAGACACCAACGACAATTCACCTCTCTTCCCTGCTGGAGATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 72 bp | GTGTGCTATTGCTTAAGGAGTACCAGACTTCTCCATTaGATCCTTCATCCGGATCCAAGGCTTGAACGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VCYCLRSTRLLH*ILHPDPRLERG Trigger: TCCACGTTCAAGCCTTGGATCCGGATGAAGGATCCAATGGAGAAGTCTGGTACTCCTTAAGCAATAGCACAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 72 bp | GGGCCTTTGCTGGACATGCTACAAGTGACCTTACCATaGGAACCTAGGTCCTCATCCTTTACACTAAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GPLLDMLQVTLP*EPRSSSFTLRR Trigger: TCTCCTTAGTGTAAAGGATGAGGACCTAGGTTCCAATGGTAAGGTCACTTGTAGCATGTCCAGCAAAGGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS TCA 72 bp | TCAACTGAAAGGGGCCTTTGCTGGACATGCTACAAGTaGCCTTACCATTGGAACCTAGGTCCTCATCCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: STERGLCWTCYK*PYHWNLGPHPL Trigger: TAAAGGATGAGGACCTAGGTTCCAATGGTAAGGTCACTTGTAGCATGTCCAGCAAAGGCCCCTTTCAGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 72 bp | TCTCGGCCTTCCACTTGGAAGTTAAACCCCCTGAGCTaGTCAAAGTCAAAGGAAGTTTTGGCAGTGATAACA | + |
|
Preference number: 6 (lower is better) Translates to: SRPSTWKLNPLS*SKSKEVLAVIT Trigger: TGTTATCACTGCCAAAACTTCCTTTGACTTTGAGCAGCTCAGGGGGTTTAACTTCCAAGTGGAAGGCCGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 90 bp | GGGATAGAGCCATTTCTAGGCAAGGGAAACAAGATGTCTGGTGCATaGTCATTCCTGTCTACCACAAACAAGTTCACAGTCACTGTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GIEPFLGKGNKMSGA*SFLSTTNKFTVTVA Trigger: TGCAACAGTGACTGTGAACTTGTTTGTGGTAGACAGGAATGACAATGCACCAGACATCTTGTTTCCCTTGCCTAGAAATGGCTCTATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 72 bp | TATCAAGTACAAGTTCCGGGCAGAAAGCTGTGCTCTTaGTTCCCAGATATCTTCAAAGTCTGGAATGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: YQVQVPGRKLCS*FPDIFKVWNDL Trigger: CAGGTCATTCCAGACTTTGAAGATATCTGGGAACCAAGAGCACAGCTTTCTGCCCGGAACTTGTACTTGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 72 bp | CCTACACCAGGGGCCAGATTTCTCAGATCAGCAGCCTaGTATTTCCCATGCAAGAAAAAGCTGTTATTACCA | + |
|
Preference number: 6 (lower is better) Translates to: PTPGARFLRSAA*YFPCKKKLLLP Trigger: TGGTAATAACAGCTTTTTCTTGCATGGGAAATACAAGGCTGCTGATCTGAGAAATCTGGCCCCTGGTGTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS GCA 72 bp | AGAGCCATTTCTAGGCAAGGGAAACAAGATGTCTGGTaGATTGTCATTCCTGTCTACCACAAACAAGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RAISRQGKQDVW*IVIPVYHKQVH Trigger: GTGAACTTGTTTGTGGTAGACAGGAATGACAATGCACCAGACATCTTGTTTCCCTTGCCTAGAAATGGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 72 bp | ACTAGAAGCCATCGTCCTCTTGTGTCTCTCATTTTCTaGAGAATGACAGAAGTTCTGAGAGCAACAATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TRSHRPLVSLIF*RMTEVLRATIW Trigger: CCAGATTGTTGCTCTCAGAACTTCTGTCATTCTCCAGAAAATGAGAGACACAAGAGGACGATGGCTTCTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 72 bp | CCATTTCTAGGCAAGGGAAACAAGATGTCTGGTGCATaGTCATTCCTGTCTACCACAAACAAGTTCACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: PFLGKGNKMSGA*SFLSTTNKFTV Trigger: GACTGTGAACTTGTTTGTGGTAGACAGGAATGACAATGCACCAGACATCTTGTTTCCCTTGCCTAGAAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 90 bp | ATGCAAGAAAAAGCTGTTATTACCATAACCAGGTCCCAGAGAAGCTaGATAGAGATATGTCTGAGAAAGTCTCTCGACTGTGGTGACATC | + |
|
Preference number: 6 (lower is better) Translates to: MQEKAVITITRSQRS*IEICLRKSLDCGDI Trigger: GATGTCACCACAGTCGAGAGACTTTCTCAGACATATCTCTATCAAGCTTCTCTGGGACCTGGTTATGGTAATAACAGCTTTTTCTTGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CCA 72 bp | TTCTGGAGAATGACAGAAGTTCTGAGAGCAACAATCTaGGCTCTGGTTCAACTTGATGCACACAAAGAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: FWRMTEVLRATI*ALVQLDAHKEK Trigger: TTTTTCTTTGTGTGCATCAAGTTGAACCAGAGCCCAGATTGTTGCTCTCAGAACTTCTGTCATTCTCCAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||
| CDS CAA 72 bp | AAAGCTGTTATTACCATAACCAGGTCCCAGAGAAGCTaGATAGAGATATGTCTGAGAAAGTCTCTCGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: KAVITITRSQRS*IEICLRKSLDC Trigger: ACAGTCGAGAGACTTTCTCAGACATATCTCTATCAAGCTTCTCTGGGACCTGGTTATGGTAATAACAGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007584.4 |
||