Pregenerated sensors for PCDHA6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000103707Ensembl transcript IDs: ENSMUST00000193389.2, ENSMUST00000193777.6, ENSMUST00000194751.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGCCTCAGGTTCTGGTGTTGCACTGGATACTGTTGGCCACTGCTaGTCAGGCCCTCCTGGACCAGCCCGTAGAATGCCAGCCTCCTCC | + |
|
Preference number: 1 (lower is better) Translates to: PASGSGVALDTVGHC*SGPPGPARRMPASS Trigger: GGAGGAGGCTGGCATTCTACGGGCTGGTCCAGGAGGGCCTGATCAGCAGTGGCCAACAGTATCCAGTGCAACACCAGAACCTGAGGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR GCA 90 bp | CTGTTGGCCACTGCTGATCAGGCCCTCCTGGACCAGCCCGTAGAATaGCAGCCTCCTCCAGGTGCACAGAGCTGTGCATGCCTGCTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: LLATADQALLDQPVE*QPPPGAQSCACLLL Trigger: TAAGAGCAGGCATGCACAGCTCTGTGCACCTGGAGGAGGCTGGCATTCTACGGGCTGGTCCAGGAGGGCCTGATCAGCAGTGGCCAACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR CCA 90 bp | TGTGCATGCCTGCTCTTAGCGAGGCAGAGTAGCGCCAGTCAGGGTTaGGCTGCCGGGGTCTTGAGCAATGATCGTCGTTCAAATCCTGAT | + |
|
Preference number: 1 (lower is better) Translates to: CACLLLARQSSASQG*AAGVLSNDRRSNPD Trigger: ATCAGGATTTGAACGACGATCATTGCTCAAGACCCCGGCAGCCCAACCCTGACTGGCGCTACTCTGCCTCGCTAAGAGCAGGCATGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR CCA 90 bp | CTGGGTCTGCTTTTTAGGTTCGGGACCGGACTGTTTGGGGTTGCCTaGTCCGTATTTAAAGGTCCAGCTGTTGCTGTTGACACCGGCGCC | + |
|
Preference number: 1 (lower is better) Translates to: LGLLFRFGTGLFGVA*SVFKGPAVAVDTGA Trigger: GGCGCCGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAGTCCGGTCCCGAACCTAAAAAGCAGACCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR CAA 90 bp | CCGGACTGTTTGGGGTTGCCTGGTCCGTATTTAAAGGTCCAGCTGTaGCTGTTGACACCGGCGCCCACCGGAGGGGACACCTCTCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: PDCLGLPGPYLKVQL*LLTPAPTGGDTSPA Trigger: GGCAGGAGAGGTGTCCCCTCCGGTGGGCGCCGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAGTCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR CAA 90 bp | TTAGCGAGGCAGAGTAGCGCCAGTCAGGGTTGGGCTGCCGGGGTCTaGAGCAATGATCGTCGTTCAAATCCTGATGCTCACCCACAACCG | + |
|
Preference number: 2 (lower is better) Translates to: LARQSSASQGWAAGV*SNDRRSNPDAHPQP Trigger: CGGTTGTGGGTGAGCATCAGGATTTGAACGACGATCATTGCTCAAGACCCCGGCAGCCCAACCCTGACTGGCGCTACTCTGCCTCGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR CAA 90 bp | ACGAAACTTCCTGGCCAGTGGCACCTTGCGCTCGCGAAGAGGCTTTaGGAGTCTGGCTGTTCTCAACCAGAGACACTAACACAGTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TKLPGQWHLALAKRL*ESGCSQPETLTQWL Trigger: CAGCCACTGTGTTAGTGTCTCTGGTTGAGAACAGCCAGACTCCAAAAGCCTCTTCGCGAGCGCAAGGTGCCACTGGCCAGGAAGTTTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCCTTTGCGGCGGGGGAGAAAGGAAACCTGGGTCTGCTTTTTAGGTTCGGGCTCAGGTTCTGGTGTTaGACTGGATACTGTTGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: FSFAAGEKGNLGLLFRFGLRFWC*TGYCWP Trigger: TGGCCAACAGTATCCAGTGCAACACCAGAACCTGAG...CCCGAACCTAAAAAGCAGACCCAGGTTTCCTTTCTCCCCCGCCGCAAAGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTCTAATCTGGACCATCCCAGCCAATACCAGGCTCTCCAACACTCTTGGTAGCAATGACAGTACTCAGTaGAGCGTCCTCTCGAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: SLIWTIPANTRLSNTLGSNDSTQ*SVLSNR Trigger: CCTGTTCGAGAGGACGCTGCACTGAGTACTGTCATT...GCTACCAAGAGTGTTGGAGAGCCTGGTATTGGCTGGGATGGTCCAGATTAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR CCA 90 bp | CACAAACACCCAACTGCTCAACCTGAATACCTTTCAGCCTGCCCTGCAAATATCACCTTTGTGACCACCTaGCCAGCACCCACTGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: HKHPTAQPEYLSACPANITFVTT*PAPTEG Trigger: ACCTTCAGTGGGTGCTGGCCAGGTGGTCACAAAGGT...GATATTTGCAGGGCAGGCTGAAAGGTATTCAGGTTGAGCAGTTGGGTGTTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCACACCGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGCTCACTGTATGTGCACTGGATACTGTTaGCCACTGCTGATCAGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: STPRQPQNQRNEKSAHCMCTGYC*PLLIRP Trigger: GGGCCTGATCAGCAGTGGCCAACAGTATCCAGTGCA...CATACAGTGAGCAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCGGTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCACACCGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGCTCACTGTATGTATAGCCAGCACACTTaGGGGGCTCCTAAAGCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: STPRQPQNQRNEKSAHCMYSQHT*GAPKAL Trigger: CAAAGCTTTAGGAGCCCCTCAAGTGTGCTGGCTATA...CATACAGTGAGCAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCGGTGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 ENSMUST00000194751.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCACACCGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGCTCACTGTATGACTTCATACTCAGGGTaGTGGAAAGTAGGGGCGTTA | + |
|
Preference number: 2 (lower is better) Translates to: STPRQPQNQRNEKSAHCMTSYSG*WKVGAL Trigger: TAACGCCCCTACTTTCCAGCACCCTGAGTATGAAGT...CATACAGTGAGCAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCGGTGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR TCA 90 bp | CACAAACACCCAACTGCTCAACCTGAATACCTTTCAGCCTGCCCTGCAAATATCTGTCGTTCCGTTGTCTaGGTTTTCCAAGATTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: HKHPTAQPEYLSACPANICRSVV*VFQDSH Trigger: GTGAGAATCTTGGAAAACTCAGACAACGGAACGACA...GATATTTGCAGGGCAGGCTGAAAGGTATTCAGGTTGAGCAGTTGGGTGTTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCAGGTGGCCGGGATAATACAGATGTTCCAGGCAATTCTCTTAAAGCACTTCCTGCTTTTTAGGTTCTaGAAACAAGCCAGAGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: WQVAGIIQMFQAILLKHFLLFRF*KQARVE Trigger: CTCCACTCTGGCTTGTTTTCAGAACCTAAAAAGCAG...GAAGTGCTTTAAGAGAATTGCCTGGAACATCTGTATTATCCCGGCCACCTGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193777.6 |
||
| 3UTR-3UTR CCA 90 bp | GATATTCCGGATAGCATTTCAAAGCAGTCTGCAAATTCAAAGAGGTCAGATTGGAAGGTCCAAGCAGCGTaGGCGCATTGTCGTTCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: DIPDSISKQSANSKRSDWKVQAA*AHCRSH Trigger: ATGAGAACGACAATGCGCCCACGCTGCTTGGACCTT...CCAATCTGACCTCTTTGAATTTGCAGACTGCTTTGAAATGCTATCCGGAATATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTCAGGAGTCTTATAATAGCATACAGCATACATATGGGAGATTGATTCAGGTAGTCAGCAGTAGCTTATaGTCAGGAGCATCCTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SQESYNSIQHTYGRLIQVVSSSL*SGASSL Trigger: CAGAGAGGATGCTCCTGAGCATAAGCTACTGCTGAC...TACCTGAATCAATCTCCCATATGTATGCTGTATGCTATTATAAGACTCCTGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR TCA 90 bp | CGGATAGCATTTCAAAGCAGTCTGCAAATTCAAAGAGGTCAGATTGGTACAATTATAAGGAAGTCAAAGTaGTCTGAGGCACATTGTCGT | + |
|
Preference number: 2 (lower is better) Translates to: RIAFQSSLQIQRGQIGTIIRKSK*SEAHCR Trigger: ACGACAATGTGCCTCAGATCACTTTGACTTCCTTAT...AATTGTACCAATCTGACCTCTTTGAATTTGCAGACTGCTTTGAAATGCTATCCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR TCA 72 bp | AGAGTAGCGCCAGTCAGGGTTGGGCTGCCGGGGTCTTaGGCAATGATCGTCGTTCAAATCCTGATGCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: RVAPVRVGLPGS*AMIVVQILMLT Trigger: GGTGAGCATCAGGATTTGAACGACGATCATTGCTCAAGACCCCGGCAGCCCAACCCTGACTGGCGCTACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR GCA 72 bp | AGACAGCCAGGCATTATAGCCAGAATCCGCATCTACTaGACGCACCTTTGTGACCACCTGGCCAGCACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RQPGIIARIRIY*THLCDHLASTH Trigger: GTGGGTGCTGGCCAGGTGGTCACAAAGGTGCGTGCAGTAGATGCGGATTCTGGCTATAATGCCTGGCTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTAATCTGGACCATCCCAGCCAATACCAGGCTCTCCAACACTCTTGGTAGCTCGGGACCGGACTGTTaGGGGTTGCCTGGTCCGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SLIWTIPANTRLSNTLGSSGPDC*GLPGPY Trigger: ATACGGACCAGGCAACCCCAAACAGTCCGGTCCCGA...GCTACCAAGAGTGTTGGAGAGCCTGGTATTGGCTGGGATGGTCCAGATTAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR CCA 72 bp | GTGGCACCTTGCGCTCGCGAAGAGGCTTTTGGAGTCTaGCTGTTCTCAACCAGAGACACTAACACAGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VAPCAREEAFGV*LFSTRDTNTVA Trigger: AGCCACTGTGTTAGTGTCTCTGGTTGAGAACAGCCAGACTCCAAAAGCCTCTTCGCGAGCGCAAGGTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR CCA 72 bp | GAAGCTTCTCCTTTGCGGCGGGGGAGAAAGGAAACCTaGGTCTGCTTTTTAGGTTCGGGACCGGACTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: EASPLRRGRKET*VCFLGSGPDCL Trigger: CAAACAGTCCGGTCCCGAACCTAAAAAGCAGACCCAGGTTTCCTTTCTCCCCCGCCGCAAAGGAGAAGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTAATCTGGACCATCCCAGCCAATACCAGGCTCTCCAACACTCTTGGTAGCTTAAAGGTCCAGCTGTaGCTGTTGACACCGGCGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SLIWTIPANTRLSNTLGSLKVQL*LLTPAP Trigger: GGGCGCCGGTGTCAACAGCAACAGCTGGACCTTTAA...GCTACCAAGAGTGTTGGAGAGCCTGGTATTGGCTGGGATGGTCCAGATTAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAGGTGGCCGGGATAATACAGATGTTCCAGGCAATTCTCTTAAAGCACTTCTGGGAAGCTTCTCCTTaGCGGCGGGGGAGAAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: WQVAGIIQMFQAILLKHFWEASP*RRGRKE Trigger: TTCCTTTCTCCCCCGCCGCAAAGGAGAAGCTTCCCA...GAAGTGCTTTAAGAGAATTGCCTGGAACATCTGTATTATCCCGGCCACCTGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000193777.6 ENSMUST00000194751.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAGGTGGCCGGGATAATACAGATGTTCCAGGCAATTCTCTTAAAGCACTTCTTGCACTGGATACTGTaGGCCACTGCTGATCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: WQVAGIIQMFQAILLKHFLHWIL*ATADQA Trigger: GGCCTGATCAGCAGTGGCCAACAGTATCCAGTGCAA...GAAGTGCTTTAAGAGAATTGCCTGGAACATCTGTATTATCCCGGCCACCTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR CCA 72 bp | CTTTTTAGGTTCGGGACCGGACTGTTTGGGGTTGCCTaGTCCGTATTTAAAGGTCCAGCTGTTGCTGTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LFRFGTGLFGVA*SVFKGPAVAVD Trigger: GTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAGTCCGGTCCCGAACCTAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTGCCTGGTCCGTATTTAAAGGTCCAGCTGTTGCTGTTGACACCGGCGCCCAGTCTAATTTGTTTGTaGCCATCGCTGTTTGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: GLPGPYLKVQLLLLTPAPSLICL*PSLFDF Trigger: GAAATCAAACAGCGATGGCAACAAACAAATTAGACT...GGGCGCCGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGAGGTCAGATTGGTACAATTTTGTGCTTGCATACCCTCAGGGACTTTCTTACCTGCAGAGTCACATaGCTGCCCAGGGCAGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: QRGQIGTILCLHTLRDFLTCRVT*LPRAGT Trigger: TGTGCCTGCCCTGGGCAGCAATGTGACTCTGCAGGT...AAGAAAGTCCCTGAGGGTATGCAAGCACAAAATTGTACCAATCTGACCTCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR GCA 72 bp | CATTGTCGTTCTCATCCAATACCTTCACTAAAACAGTaGAATGGCCCACCATCGGAGGGTGTCCTTTGTCCG | + |
|
Preference number: 3 (lower is better) Translates to: HCRSHPIPSLKQ*NGPPSEGVLCP Trigger: CGGACAAAGGACACCCTCCGATGGTGGGCCATTGCACTGTTTTAGTGAAGGTATTGGATGAGAACGACAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGATCTGCTTCTGTTGCCCTGGCCGACCCTCTTGTTAAACGCTTGAACTGCTTCGTCCCTTCATCCTaGTCAGAAGCATTCAGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: IRSASVALADPLVKRLNCFVPSS*SEAFSL Trigger: TAGACTGAATGCTTCTGACAAGGATGAAGGGACGAA...GCAGTTCAAGCGTTTAACAAGAGGGTCGGCCAGGGCAACAGAAGCAGATCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTCAAAGAGGTCAGATTGGTACAATTTTGTGCTTGCATACCCTCAGGGACTTCAGGTCACCTGCCCGTaGGATCCAGAGTCCAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: NSKRSDWYNFVLAYPQGLQVTCP*DPESRS Trigger: GGATCTGGACTCTGGATCCAACGGGCAGGTGACCTG...AAGTCCCTGAGGGTATGCAAGCACAAAATTGTACCAATCTGACCTCTTTGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCACACCGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGCTCACTGTATGATCAAGACAGGATGCTaGAAGCACAGGGCAGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: STPRQPQNQRNEKSAHCMIKTGC*KHRAES Trigger: ACTCTCTGCCCTGTGCTTCAAGCATCCTGTCTTGAT...CATACAGTGAGCAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCGGTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 ENSMUST00000194751.2 |
||
| 3UTR-3UTR CAA 90 bp | CGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGCTCACTGTATGCATGAGAGAAAGGAGCGGGGAGTaGCTACATGGGAGAGATTTG | + |
|
Preference number: 3 (lower is better) Translates to: RDNHRTRGMKSLLTVCMRERSGE*LHGRDL Trigger: CAAATCTCTCCCATGTAGCAACTCCCCGCTCCTTTC...TCTCATGCATACAGTGAGCAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193777.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCACACCGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGCTCACTGTATGTTTGCATATGTGTTGTaGGAAAAGGATGAGACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: STPRQPQNQRNEKSAHCMFAYVL*EKDETF Trigger: AAAGGTCTCATCCTTTTCCAACAACACATATGCAAA...CATACAGTGAGCAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCGGTGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 ENSMUST00000194751.2 |
||
| 3UTR-3UTR CAA 90 bp | CAATTTTGTGCTTGCATACCCTCAGGGACTTTCTTCAGTATTTATTCCAGAATTTTTGTAGACATCTACTaGCTCAAAGTCCAAATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QFCACIPSGTFFSIYSRIFVDIY*LKVQIS Trigger: GGAAATTTGGACTTTGAGCAAGTAGATGTCTACAAA...AATTCTGGAATAAATACTGAAGAAAGTCCCTGAGGGTATGCAAGCACAAAATTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR CAA 72 bp | TTGGGGTTGCCTGGTCCGTATTTAAAGGTCCAGCTGTaGCTGTTGACACCGGCGCCCACCGGAGGGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: LGLPGPYLKVQL*LLTPAPTGGDT Trigger: GGTGTCCCCTCCGGTGGGCGCCGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTAATCTGGACCATCCCAGCCAATACCAGGCTCTCCAACACTCTTGGTAGCAGCGCCAGTCAGGGTTaGGCTGCCGGGGTCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLIWTIPANTRLSNTLGSSASQG*AAGVLS Trigger: GCTCAAGACCCCGGCAGCCCAACCCTGACTGGCGCT...GCTACCAAGAGTGTTGGAGAGCCTGGTATTGGCTGGGATGGTCCAGATTAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| 3UTR CAA 72 bp | CCTGGCCAGTGGCACCTTGCGCTCGCGAAGAGGCTTTaGGAGTCTGGCTGTTCTCAACCAGAGACACTAACA | + |
|
Preference number: 4 (lower is better) Translates to: PGQWHLALAKRL*ESGCSQPETLT Trigger: TGTTAGTGTCTCTGGTTGAGAACAGCCAGACTCCAAAAGCCTCTTCGCGAGCGCAAGGTGCCACTGGCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| 3UTR CAA 72 bp | CAGAGTAGCGCCAGTCAGGGTTGGGCTGCCGGGGTCTaGAGCAATGATCGTCGTTCAAATCCTGATGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QSSASQGWAAGV*SNDRRSNPDAH Trigger: GTGAGCATCAGGATTTGAACGACGATCATTGCTCAAGACCCCGGCAGCCCAACCCTGACTGGCGCTACTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| CDS-3UTR CCA 90 bp | ATCAGATCTGCTTCTGTTGCCCTGGCCGACCCTCTTGTTAAACGCTTGAACTGCCTAACACAGTGGCTGTaGCAATCAGCGCTGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IRSASVALADPLVKRLNCLTQWL*QSALAP Trigger: GGGAGCCAGCGCTGATTGCCACAGCCACTGTGTTAG...GCAGTTCAAGCGTTTAACAAGAGGGTCGGCCAGGGCAACAGAAGCAGATCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CCA 90 bp | GCAGGTTTTGAATACAGTGATGTTATAGCCAGCACACTTGAGGGGCTCCTAAAGAGCGCCAGTCAGGGTTaGGCTGCCGGGGTCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGFEYSDVIASTLEGLLKSASQG*AAGVLS Trigger: GCTCAAGACCCCGGCAGCCCAACCCTGACTGGCGCT...CTTTAGGAGCCCCTCAAGTGTGCTGGCTATAACATCACTGTATTCAAAACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| 3UTR CAA 72 bp | ACCTGGGTCTGCTTTTTAGGTTCGGGACCGGACTGTTaGGGGTTGCCTGGTCCGTATTTAAAGGTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TWVCFLGSGPDC*GLPGPYLKVQL Trigger: CAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAGTCCGGTCCCGAACCTAAAAAGCAGACCCAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGTGGCCGGGATAATACAGATGTTCCAGGCAATTCTCTTAAAGCACTTCAGGGAGCAGGTCACCTaGCCGTTGGATCCAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WQVAGIIQMFQAILLKHFREQVT*PLDPES Trigger: GGACTCTGGATCCAACGGGCAGGTGACCTGCTCCCT...GAAGTGCTTTAAGAGAATTGCCTGGAACATCTGTATTATCCCGGCCACCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| 3UTR CAA 72 bp | GTCTGCTTTTTAGGTTCGGGACCGGACTGTTTGGGGTaGCCTGGTCCGTATTTAAAGGTCCAGCTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCFLGSGPDCLG*PGPYLKVQLLL Trigger: CAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAGTCCGGTCCCGAACCTAAAAAGCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194751.2 |
||
| CDS-3UTR CCA 90 bp | ATCAGATCTGCTTCTGTTGCCCTGGCCGACCCTCTTGTTAAACGCTTGAACTGCGAGACACTAACACAGTaGCTGTGGCAATCAGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRSASVALADPLVKRLNCETLTQ*LWQSAL Trigger: CAGCGCTGATTGCCACAGCCACTGTGTTAGTGTCTC...GCAGTTCAAGCGTTTAACAAGAGGGTCGGCCAGGGCAACAGAAGCAGATCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR TCA 90 bp | AGTCTAATCTGGACCATCCCAGCCAATACCAGGCTCTCCAACACTCTTGGTAGCTCTTTGCTCCTTTACTaGGAACACAGGCGGGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: SLIWTIPANTRLSNTLGSSLLLY*EHRRVI Trigger: GATAACCCGCCTGTGTTCTCAGTAAAGGAGCAAAGA...GCTACCAAGAGTGTTGGAGAGCCTGGTATTGGCTGGGATGGTCCAGATTAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR GCA 90 bp | AGGTGTAGGCTAGCACACCGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGGATACTGTGAAGATGTaGGCTCCAGGAGGGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RCRLAHRDNHRTRGMKSLDTVKM*APGGLF Trigger: GAACAACCCTCCTGGAGCGCACATCTTCACAGTATC...CAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCGGTGTGCTAGCCTACACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGTGGCCGGGATAATACAGATGTTCCAGGCAATTCTCTTAAAGCACTTCGAGACACTAACACAGTaGCTGTGGCAATCAGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WQVAGIIQMFQAILLKHFETLTQ*LWQSAL Trigger: CAGCGCTGATTGCCACAGCCACTGTGTTAGTGTCTC...GAAGTGCTTTAAGAGAATTGCCTGGAACATCTGTATTATCCCGGCCACCTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGTGGCCGGGATAATACAGATGTTCCAGGCAATTCTCTTAAAGCACTTCGTCAGCAGTAGCTTATaGTCAGGAGCATCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WQVAGIIQMFQAILLKHFVSSSL*SGASSL Trigger: CAGAGAGGATGCTCCTGAGCATAAGCTACTGCTGAC...GAAGTGCTTTAAGAGAATTGCCTGGAACATCTGTATTATCCCGGCCACCTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGTGGCCGGGATAATACAGATGTTCCAGGCAATTCTCTTAAAGCACTTCGATACTGTGAAGATGTaGGCTCCAGGAGGGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WQVAGIIQMFQAILLKHFDTVKM*APGGLF Trigger: GAACAACCCTCCTGGAGCGCACATCTTCACAGTATC...GAAGTGCTTTAAGAGAATTGCCTGGAACATCTGTATTATCCCGGCCACCTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR GCA 90 bp | CACAAACACCCAACTGCTCAACCTGAATACCTTTCAGCCTGCCCTGCAAATATCAAGGAAACCTGGGTCTaGTTTTTAGGTTCGGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: HKHPTAQPEYLSACPANIKETWV*FLGSGP Trigger: CGGTCCCGAACCTAAAAAGCAGACCCAGGTTTCCTT...GATATTTGCAGGGCAGGCTGAAAGGTATTCAGGTTGAGCAGTTGGGTGTTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193389.2 |
||
| CDS-3UTR CCA 90 bp | CACAAACACCCAACTGCTCAACCTGAATACCTTTCAGCCTGCCCTGCAAATATCGTTTGCCTCCATCCGTaGCTGTCAGCAGTAGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HKHPTAQPEYLSACPANIVCLHP*LSAVAY Trigger: ATAAGCTACTGCTGACAGCCACGGATGGAGGCAAAC...GATATTTGCAGGGCAGGCTGAAAGGTATTCAGGTTGAGCAGTTGGGTGTTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CCA 90 bp | AGCACACCGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGCTCACTGTATGGAGGCTTTTGGAGTCTaGCTGTTCTCAACCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: STPRQPQNQRNEKSAHCMEAFGV*LFSTRD Trigger: GTCTCTGGTTGAGAACAGCCAGACTCCAAAAGCCTC...CATACAGTGAGCAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCGGTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR GCA 90 bp | CCAACTGCTCAACCTGAATACCTTTCAGCCTGCCCTGCAAATATCATCAAGACAGTCAGCAGTAGCTTATaGTCAGGAGCATCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTAQPEYLSACPANIIKTVSSSL*SGASSL Trigger: CAGAGAGGATGCTCCTGAGCATAAGCTACTGCTGAC...TGTCTTGATGATATTTGCAGGGCAGGCTGAAAGGTATTCAGGTTGAGCAGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR GCA 90 bp | CCAACTGCTCAACCTGAATACCTTTCAGCCTGCCCTGCAAATATCATCAAGACAGCATCTATGCTAAACTaGTCAAGAGTCTTGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTAQPEYLSACPANIIKTASMLN*SRVLGG Trigger: GCCGCCCAAGACTCTTGAGCAGTTTAGCATAGATGC...TGTCTTGATGATATTTGCAGGGCAGGCTGAAAGGTATTCAGGTTGAGCAGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR GCA 90 bp | CCAACTGCTCAACCTGAATACCTTTCAGCCTGCCCTGCAAATATCATCAAGACAAATGACAGTACTCAGTaGAGCGTCCTCTCGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTAQPEYLSACPANIIKTNDSTQ*SVLSNR Trigger: CCTGTTCGAGAGGACGCTGCACTGAGTACTGTCATT...TGTCTTGATGATATTTGCAGGGCAGGCTGAAAGGTATTCAGGTTGAGCAGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR GCA 90 bp | CGGATAGCATTTCAAAGCAGTCTGCAAATTCAAAGAGGTCAGATTGGTACAATTAGGGAGCAGGTCACCTaGCCGTTGGATCCAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RIAFQSSLQIQRGQIGTIREQVT*PLDPES Trigger: GGACTCTGGATCCAACGGGCAGGTGACCTGCTCCCT...AATTGTACCAATCTGACCTCTTTGAATTTGCAGACTGCTTTGAAATGCTATCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CCA 90 bp | GTGGCCGGGATAATACAGATGTTCCAGGCAATTCTCTTAAAGCACTTCTGTAGCGTTTGCCTCCATCCGTaGCTGTCAGCAGTAGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VAGIIQMFQAILLKHFCSVCLHP*LSAVAY Trigger: ATAAGCTACTGCTGACAGCCACGGATGGAGGCAAAC...GCTACAGAAGTGCTTTAAGAGAATTGCCTGGAACATCTGTATTATCCCGGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CCA 90 bp | ACACCGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGCTCACTGTATGCATTCGCGAAGAGGCTTTTaGAGTCTGGCTGTTCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TPRQPQNQRNEKSAHCMHSRRGF*SLAVLN Trigger: GTTGAGAACAGCCAGACTCCAAAAGCCTCTTCGCGA...ATGCATACAGTGAGCAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CCA 90 bp | CGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGCTCACTGTATGCATGAGATCGCGAAGAGGCTTTTaGAGTCTGGCTGTTCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RDNHRTRGMKSLLTVCMRSRRGF*SLAVLN Trigger: GTTGAGAACAGCCAGACTCCAAAAGCCTCTTCGCGA...TCTCATGCATACAGTGAGCAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR TCA 90 bp | CCAACTGCTCAACCTGAATACCTTTCAGCCTGCCCTGCAAATATCATCAAGACATGTCGTTCCGTTGTCTaGGTTTTCCAAGATTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PTAQPEYLSACPANIIKTCRSVV*VFQDSH Trigger: GTGAGAATCTTGGAAAACTCAGACAACGGAACGACA...TGTCTTGATGATATTTGCAGGGCAGGCTGAAAGGTATTCAGGTTGAGCAGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR TCA 90 bp | CACAAACACCCAACTGCTCAACCTGAATACCTTTCAGCCTGCCCTGCAAATATCATAAGGAAGTCAAAGTaGTCTGAGGCACATTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HKHPTAQPEYLSACPANIIRKSK*SEAHCR Trigger: ACGACAATGTGCCTCAGATCACTTTGACTTCCTTAT...GATATTTGCAGGGCAGGCTGAAAGGTATTCAGGTTGAGCAGTTGGGTGTTTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CCA 90 bp | ACTTCTGTAGCAGCAACGATCATTTCAAATGGCTGTAGACTGGATTCTCTTTTGAAGGTCCAAGCAGCGTaGGCGCATTGTCGTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSVAATIISNGCRLDSLLKVQAA*AHCRSH Trigger: ATGAGAACGACAATGCGCCCACGCTGCTTGGACCTT...CAAAAGAGAATCCAGTCTACAGCCATTTGAAATGATCGTTGCTGCTACAGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CCA 90 bp | CGGATAGCATTTCAAAGCAGTCTGCAAATTCAAAGAGGTCAGATTGGTACAATTACCTTTGTGACCACCTaGCCAGCACCCACTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RIAFQSSLQIQRGQIGTITFVTT*PAPTEG Trigger: ACCTTCAGTGGGTGCTGGCCAGGTGGTCACAAAGGT...AATTGTACCAATCTGACCTCTTTGAATTTGCAGACTGCTTTGAAATGCTATCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CCA 90 bp | CAAAGAGGTCAGATTGGTACAATTTTGTGCTTGCATACCCTCAGGGACTTTCTTGAGGCTTTTGGAGTCTaGCTGTTCTCAACCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QRGQIGTILCLHTLRDFLEAFGV*LFSTRD Trigger: GTCTCTGGTTGAGAACAGCCAGACTCCAAAAGCCTC...AAGAAAGTCCCTGAGGGTATGCAAGCACAAAATTGTACCAATCTGACCTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR GCA 90 bp | ACTTCTGTAGCAGCAACGATCATTTCAAATGGCTGTAGACTGGATTCTCTTTTGAATGACAGTACTCAGTaGAGCGTCCTCTCGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSVAATIISNGCRLDSLLNDSTQ*SVLSNR Trigger: CCTGTTCGAGAGGACGCTGCACTGAGTACTGTCATT...CAAAAGAGAATCCAGTCTACAGCCATTTGAAATGATCGTTGCTGCTACAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR GCA 90 bp | TCTCAGGAGTCTTATAATAGCATACAGCATACATATGGGAGATTGATTCAGGTAGGGAAGCTTCTCCTTTaGGGCGGGGGAGAAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQESYNSIQHTYGRLIQVGKLLL*GGGERK Trigger: TTTCCTTTCTCCCCCGCCGCAAAGGAGAAGCTTCCC...TACCTGAATCAATCTCCCATATGTATGCTGTATGCTATTATAAGACTCCTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193389.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGTAGGCTAGCACACCGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGTGGAAACAAAGAATCTaGCAGCCTAGATTCGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RCRLAHRDNHRTRGMKSLWKQRI*QPRFVN Trigger: ATTTACGAATCTAGGCTGCCAGATTCTTTGTTTCCA...CAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCGGTGTGCTAGCCTACACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CCA 90 bp | TCTCAGGAGTCTTATAATAGCATACAGCATACATATGGGAGATTGATTCAGGTAACCTTTGTGACCACCTaGCCAGCACCCACTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQESYNSIQHTYGRLIQVTFVTT*PAPTEG Trigger: ACCTTCAGTGGGTGCTGGCCAGGTGGTCACAAAGGT...TACCTGAATCAATCTCCCATATGTATGCTGTATGCTATTATAAGACTCCTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CCA 90 bp | ATATCGTGGGTTAGAGAAGGTTGTGTAATCAAAGTGCACATCATTTTTCTTAGACTAACACAGTGGCTGTaGCAATCAGCGCTGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISWVREGCVIKVHIIFLRLTQWL*QSALAP Trigger: GGGAGCCAGCGCTGATTGCCACAGCCACTGTGTTAG...TCTAAGAAAAATGATGTGCACTTTGATTACACAACCTTCTCTAACCCACGATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR GCA 90 bp | CGGATAGCATTTCAAAGCAGTCTGCAAATTCAAAGAGGTCAGATTGGTACAATTACTTCATACTCAGGGTaGTGGAAAGTAGGGGCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RIAFQSSLQIQRGQIGTITSYSG*WKVGAL Trigger: TAACGCCCCTACTTTCCAGCACCCTGAGTATGAAGT...AATTGTACCAATCTGACCTCTTTGAATTTGCAGACTGCTTTGAAATGCTATCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CCA 90 bp | AAAAACCAGCTTTATCCATTTTCCCTTGCCAGCAGGATTCTTGGCAAGAGACAGTGGAAACAAAGAATCTaGCAGCCTAGATTCGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KNQLYPFSLASRILGKRQWKQRI*QPRFVN Trigger: ATTTACGAATCTAGGCTGCCAGATTCTTTGTTTCCA...CTGTCTCTTGCCAAGAATCCTGCTGGCAAGGGAAAATGGATAAAGCTGGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR TCA 90 bp | GTAAGTATATCTCAGGAGTCTTATAATAGCATACAGCATACATATGGGAGATTGTCTTTGCTCCTTTACTaGGAACACAGGCGGGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: VSISQESYNSIQHTYGRLSLLLY*EHRRVI Trigger: GATAACCCGCCTGTGTTCTCAGTAAAGGAGCAAAGA...CAATCTCCCATATGTATGCTGTATGCTATTATAAGACTCCTGAGATATACTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR GCA 90 bp | ATATCGTGGGTTAGAGAAGGTTGTGTAATCAAAGTGCACATCATTTTTCTTAGAACTTCATACTCAGGGTaGTGGAAAGTAGGGGCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ISWVREGCVIKVHIIFLRTSYSG*WKVGAL Trigger: TAACGCCCCTACTTTCCAGCACCCTGAGTATGAAGT...TCTAAGAAAAATGATGTGCACTTTGATTACACAACCTTCTCTAACCCACGATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | ATCAGATCTGCTTCTGTTGCCCTGGCCGACCCTCTTGTTAAACGCTTGAACTGCCCGGGACCGGACTGTTaGGGGTTGCCTGGTCCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: IRSASVALADPLVKRLNCPGPDC*GLPGPY Trigger: ATACGGACCAGGCAACCCCAAACAGTCCGGTCCCGG...GCAGTTCAAGCGTTTAACAAGAGGGTCGGCCAGGGCAACAGAAGCAGATCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | ATCAGATCTGCTTCTGTTGCCCTGGCCGACCCTCTTGTTAAACGCTTGAACTGCCAGGTCACCTGCCCGTaGGATCCAGAGTCCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: IRSASVALADPLVKRLNCQVTCP*DPESRS Trigger: GGATCTGGACTCTGGATCCAACGGGCAGGTGACCTG...GCAGTTCAAGCGTTTAACAAGAGGGTCGGCCAGGGCAACAGAAGCAGATCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | GCAGGTTTTGAATACAGTGATGTTATAGCCAGCACACTTGAGGGGCTCCTAAAGGTCCAGCTGTTGCTGTaGACACCGGCGCCCACCGGA | + |
|
Preference number: 5 (lower is better) Translates to: AGFEYSDVIASTLEGLLKVQLLL*TPAPTG Trigger: TCCGGTGGGCGCCGGTGTCAACAGCAACAGCTGGAC...CTTTAGGAGCCCCTCAAGTGTGCTGGCTATAACATCACTGTATTCAAAACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | AGCACACCGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGCTCACTGTATGACCTGCAGAGTCACATaGCTGCCCAGGGCAGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: STPRQPQNQRNEKSAHCMTCRVT*LPRAGT Trigger: TGTGCCTGCCCTGGGCAGCAATGTGACTCTGCAGGT...CATACAGTGAGCAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCGGTGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | AAAAACCAGCTTTATCCATTTTCCCTTGCCAGCAGGATTCTTGGCAAGAGACAGGTCCAGCTGTTGCTGTaGACACCGGCGCCCACCGGA | + |
|
Preference number: 5 (lower is better) Translates to: KNQLYPFSLASRILGKRQVQLLL*TPAPTG Trigger: TCCGGTGGGCGCCGGTGTCAACAGCAACAGCTGGAC...CTGTCTCTTGCCAAGAATCCTGCTGGCAAGGGAAAATGGATAAAGCTGGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | TGGCAGGTGGCCGGGATAATACAGATGTTCCAGGCAATTCTCTTAAAGCACTTCTCGGGACCGGACTGTTaGGGGTTGCCTGGTCCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: WQVAGIIQMFQAILLKHFSGPDC*GLPGPY Trigger: ATACGGACCAGGCAACCCCAAACAGTCCGGTCCCGA...GAAGTGCTTTAAGAGAATTGCCTGGAACATCTGTATTATCCCGGCCACCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193389.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCAGCCTGCCCTGCAAATATCATCAAGACAGGATGCTTGAAGCACAGGGCACCTCAGGTTCTGGTGTaGCACTGGATACTGTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LSACPANIIKTGCLKHRAPQVLV*HWILLA Trigger: GGCCAACAGTATCCAGTGCAACACCAGAACCTGAGG...TGCCCTGTGCTTCAAGCATCCTGTCTTGATGATATTTGCAGGGCAGGCTGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | AGCACACCGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGCTCACTGTATGTTAAAGGTCCAGCTGTaGCTGTTGACACCGGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: STPRQPQNQRNEKSAHCMLKVQL*LLTPAP Trigger: GGGCGCCGGTGTCAACAGCAACAGCTGGACCTTTAA...CATACAGTGAGCAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCGGTGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | AGCACACCGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGCTCACTGTATGTTGCACTGGATACTGTaGGCCACTGCTGATCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: STPRQPQNQRNEKSAHCMLHWIL*ATADQA Trigger: GGCCTGATCAGCAGTGGCCAACAGTATCCAGTGCAA...CATACAGTGAGCAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCGGTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | AGCACACCGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGCTCACTGTATGCCTCAGGTTCTGGTGTaGCACTGGATACTGTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: STPRQPQNQRNEKSAHCMPQVLV*HWILLA Trigger: GGCCAACAGTATCCAGTGCAACACCAGAACCTGAGG...CATACAGTGAGCAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCGGTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | CTTTCAGCCTGCCCTGCAAATATCATCAAGACAGGATGCTTGAAGCACAGGGCACCGGACTGTTTGGGGTaGCCTGGTCCGTATTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSACPANIIKTGCLKHRAPDCLG*PGPYLK Trigger: CTTTAAATACGGACCAGGCAACCCCAAACAGTCCGG...TGCCCTGTGCTTCAAGCATCCTGTCTTGATGATATTTGCAGGGCAGGCTGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | CGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGCTCACTGTATGCATGAGATTGCACTGGATACTGTaGGCCACTGCTGATCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RDNHRTRGMKSLLTVCMRLHWIL*ATADQA Trigger: GGCCTGATCAGCAGTGGCCAACAGTATCCAGTGCAA...TCTCATGCATACAGTGAGCAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | GTGGCCGGGATAATACAGATGTTCCAGGCAATTCTCTTAAAGCACTTCTGTAGCCCGGACTGTTTGGGGTaGCCTGGTCCGTATTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VAGIIQMFQAILLKHFCSPDCLG*PGPYLK Trigger: CTTTAAATACGGACCAGGCAACCCCAAACAGTCCGG...GCTACAGAAGTGCTTTAAGAGAATTGCCTGGAACATCTGTATTATCCCGGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | CACAAACACCCAACTGCTCAACCTGAATACCTTTCAGCCTGCCCTGCAAATATCCTTTTGTCAATTTGGTaGTTAGCAGGCTCCTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: HKHPTAQPEYLSACPANILLSIW*LAGSCR Trigger: CCGGCAGGAGCCTGCTAACAACCAAATTGACAAAAG...GATATTTGCAGGGCAGGCTGAAAGGTATTCAGGTTGAGCAGTTGGGTGTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | CGGATAGCATTTCAAAGCAGTCTGCAAATTCAAAGAGGTCAGATTGGTACAATTCAGGTCACCTGCCCGTaGGATCCAGAGTCCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: RIAFQSSLQIQRGQIGTIQVTCP*DPESRS Trigger: GGATCTGGACTCTGGATCCAACGGGCAGGTGACCTG...AATTGTACCAATCTGACCTCTTTGAATTTGCAGACTGCTTTGAAATGCTATCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | AATTCAAAGAGGTCAGATTGGTACAATTTTGTGCTTGCATACCCTCAGGGACTTTTAAAGGTCCAGCTGTaGCTGTTGACACCGGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NSKRSDWYNFVLAYPQGLLKVQL*LLTPAP Trigger: GGGCGCCGGTGTCAACAGCAACAGCTGGACCTTTAA...AAGTCCCTGAGGGTATGCAAGCACAAAATTGTACCAATCTGACCTCTTTGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | CGAGACAACCACAGAACCAGAGGAATGAAAAGTCTGCTCACTGTATGCATGAGACCTGGGATAATGAATTaGTCTGGCAACTCACCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RDNHRTRGMKSLLTVCMRPGIMN*SGNSPG Trigger: TCCCGGTGAGTTGCCAGACAAATTCATTATCCCAGG...TCTCATGCATACAGTGAGCAGACTTTTCATTCCTCTGGTTCTGTGGTTGTCTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | TGCCCTGCAAATATCATCAAGACAGGATGCTTGAAGCACAGGGCAGAGAGTCCAATCGCTTTTGTCAATTaGGTTGTTAGCAGGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPANIIKTGCLKHRAESPIAFVN*VVSRLL Trigger: CAGGAGCCTGCTAACAACCAAATTGACAAAAGCGAT...TGGACTCTCTGCCCTGTGCTTCAAGCATCCTGTCTTGATGATATTTGCAGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | TGCCCTGCAAATATCATCAAGACAGGATGCTTGAAGCACAGGGCAGAGAGTCCATTGGTCTCCTCCTTTTaGCCGAAGGTTATAAAATCG | + |
|
Preference number: 5 (lower is better) Translates to: CPANIIKTGCLKHRAESPLVSSF*PKVIKS Trigger: CGATTTTATAACCTTCGGCAAAAAGGAGGAGACCAA...TGGACTCTCTGCCCTGTGCTTCAAGCATCCTGTCTTGATGATATTTGCAGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | CCAACTGCTCAACCTGAATACCTTTCAGCCTGCCCTGCAAATATCATCAAGACATTCGTCCCTTCATCCTaGTCAGAAGCATTCAGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PTAQPEYLSACPANIIKTFVPSS*SEAFSL Trigger: TAGACTGAATGCTTCTGACAAGGATGAAGGGACGAA...TGTCTTGATGATATTTGCAGGGCAGGCTGAAAGGTATTCAGGTTGAGCAGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | CTTTCAGCCTGCCCTGCAAATATCATCAAGACAGGATGCTTGAAGCACAGGGCATTTTTCTCCTGGGTCTaGTTACCCTTCTTCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSACPANIIKTGCLKHRAFFSWV*LPFFFF Trigger: GAAAAAGAAGAAGGGTAACAAGACCCAGGAGAAAAA...TGCCCTGTGCTTCAAGCATCCTGTCTTGATGATATTTGCAGGGCAGGCTGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | TCTCAGGAGTCTTATAATAGCATACAGCATACATATGGGAGATTGATTCAGGTATGGGAAGCTTCTCCTTaGCGGCGGGGGAGAAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SQESYNSIQHTYGRLIQVWEASP*RRGRKE Trigger: TTCCTTTCTCCCCCGCCGCAAAGGAGAAGCTTCCCA...TACCTGAATCAATCTCCCATATGTATGCTGTATGCTATTATAAGACTCCTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193389.2 |
||
| CDS-3UTR CAA 90 bp | CCAACTGCTCAACCTGAATACCTTTCAGCCTGCCCTGCAAATATCATCAAGACAAGTCTAATTTGTTTGTaGCCATCGCTGTTTGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: PTAQPEYLSACPANIIKTSLICL*PSLFDF Trigger: GAAATCAAACAGCGATGGCAACAAACAAATTAGACT...TGTCTTGATGATATTTGCAGGGCAGGCTGAAAGGTATTCAGGTTGAGCAGTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | AAAAACCAGCTTTATCCATTTTCCCTTGCCAGCAGGATTCTTGGCAAGAGACAGATGATCAGGTACACGTaGACATTCACTAACGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: KNQLYPFSLASRILGKRQMIRYT*TFTNET Trigger: AGTTTCGTTAGTGAATGTCAACGTGTACCTGATCAT...CTGTCTCTTGCCAAGAATCCTGCTGGCAAGGGAAAATGGATAAAGCTGGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | CGGATAGCATTTCAAAGCAGTCTGCAAATTCAAAGAGGTCAGATTGGTACAATTTTTGTAGACATCTACTaGCTCAAAGTCCAAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RIAFQSSLQIQRGQIGTIFVDIY*LKVQIS Trigger: GGAAATTTGGACTTTGAGCAAGTAGATGTCTACAAA...AATTGTACCAATCTGACCTCTTTGAATTTGCAGACTGCTTTGAAATGCTATCCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||
| CDS-3UTR CAA 90 bp | GTAAGTATATCTCAGGAGTCTTATAATAGCATACAGCATACATATGGGAGATTGAGTCTAATTTGTTTGTaGCCATCGCTGTTTGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSISQESYNSIQHTYGRLSLICL*PSLFDF Trigger: GAAATCAAACAGCGATGGCAACAAACAAATTAGACT...CAATCTCCCATATGTATGCTGTATGCTATTATAAGACTCCTGAGATATACTTAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193389.2 ENSMUST00000193777.6 |
||