Pregenerated sensors for PCDH8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036422Ensembl transcript IDs: ENSMUST00000039568.11, ENSMUST00000195355.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCGTCGGCCGCGGGGCTaGCAAAGGGCGCTTTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCRRPRG*QRALCR Trigger: GCGGCAAAGCGCCCTTTGGCAGCCCCGCGGCCGACG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
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| CDS-3UTR TCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCCTGCCCAGCCAAGGTaGGGCGGCCAGAGCGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYPAQPR*GGQSAG Trigger: ACCCGCGCTCTGGCCGCCTCACCTTGGCTGGGCAGG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTACGCACGCTGAGGGCTaGTGTGGCGGAACGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCTHAEG*CGGTRR Trigger: CCGCCGCGTTCCGCCACAGCAGCCCTCAGCGTGCGT...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTTTTCCCCAGTGGCGCTaGCGCCCTCCGAGCCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCFPQWR*RPPSPA Trigger: TGCCGGGCTCGGAGGGCGGCAGCGCCACTGGGGAAA...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
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| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTACCAGGTCCGCACACTaGGCACCGTCCGCGCGCGTC | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCTRSAH*APSARV Trigger: GACGCGCGCGGACGGTGCCCAGTGTGCGGACCTGGT...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGGCTGTCCGGGGCCCTaGACCTCGGTCTTGAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCGCPGP*TSVLSP Trigger: CGGGCTCAAGACCGAGGTCCAGGGCCCCGGACAGCC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCGCGGGCTGCCACTGTaGCCAGGTAGGCGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCRGLPL*PGRRLE Trigger: CTCCAGGCGCCTACCTGGCCACAGTGGCAGCCCGCG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCTGGGCTCCCGGAGCTaGCAGGCACAGCTGACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCLGSRS*QAQLTR Trigger: GCGGGTCAGCTGTGCCTGCCAGCTCCGGGAGCCCAG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTTGGCCGGGAGTGCTCTaGGCTCCCGGAGCTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCWPGVL*APGAGR Trigger: CCTGCCAGCTCCGGGAGCCCAGAGCACTCCCGGCCA...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGAGGCGAGAGCCGGGTaGCCGGGAGTGCTCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCEARAG*PGVLWA Trigger: AGCCCAGAGCACTCCCGGCCACCCGGCTCTCGCCTC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTAGGCGCTTTCCCCAGTaGCGCTGCCGCCCTCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCRRFPQ*RCRPPS Trigger: GCTCGGAGGGCGGCAGCGCCACTGGGGAAAGCGCCT...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
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| CDS-3UTR TCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCCTGGACCTCGGTCTTaGGCCCGCACGTCCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCPGPRS*ARTSSS Trigger: CGAGCTGGACGTGCGGGCTCAAGACCGAGGTCCAGG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGCACCTCCAGGGGGATaGGTGTGCCTACCGGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCAPPGG*VCLPER Trigger: GCGCTCCGGTAGGCACACGCATCCCCCTGGAGGTGC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATACGCACGCTGAGGGCTaGTGTGGCGGAACGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYTHAEG*CGGTRR Trigger: CCGCCGCGTTCCGCCACAGCAGCCCTCAGCGTGCGT...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGTCAGGGTCGCGGGCTaGCACTGTGGCCAGGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCVRVAG*HCGQVG Trigger: GCCTACCTGGCCACAGTGGCAGCCCGCGACCCTGAC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCTGGGCTCCCGGAGCTaGCAGGCACAGCTGACCCGC | + |
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Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYLGSRS*QAQLTR Trigger: GCGGGTCAGCTGTGCCTGCCAGCTCCGGGAGCCCAG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATTGGCCGGGAGTGCTCTaGGCTCCCGGAGCTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYWPGVL*APGAGR Trigger: CCTGCCAGCTCCGGGAGCCCAGAGCACTCCCGGCCA...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR TCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTTGCGGGCGCCGAAGGTaGACACAACGTCGCCGTTGG | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCCGRRR*TQRRRW Trigger: CCAACGGCGACGTTGTGTTCACCTTCGGCGCCCGCA...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR TCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCCTGGACCTCGGTCTTaGGCCCGCACGTCCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYPGPRS*ARTSSS Trigger: CGAGCTGGACGTGCGGGCTCAAGACCGAGGTCCAGG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGCACCTCCAGGGGGATaGGTGTGCCTACCGGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYAPPGG*VCLPER Trigger: GCGCTCCGGTAGGCACACGCATCCCCCTGGAGGTGC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGTCAGGGTCGCGGGCTaGCACTGTGGCCAGGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYVRVAG*HCGQVG Trigger: GCCTACCTGGCCACAGTGGCAGCCCGCGACCCTGAC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGGCCAGCACGCACTGTaGGGACGGGCCACACAGACG | + |
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Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYGQHAL*GRATQT Trigger: CGTCTGTGTGGCCCGTCCCCACAGTGCGTGCTGGCC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATACCTCCACCGGGATCTaGGCTCGGGGAAAGCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYTSTGI*ARGKRG Trigger: GCCCCGCTTTCCCCGAGCCCAGATCCCGGTGGAGGT...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGGGAACCGCCGTCGCTaGCCTGGACACGCACGTCAA | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCGNRRR*PGHARQ Trigger: TTGACGTGCGTGTCCAGGCCAGCGACGGCGGTTCCC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCGAACATGTTGGGCCTaGGCCCAGTTCCCCTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCRTCWA*AQFPWR Trigger: CCGCCAGGGGAACTGGGCCCAGGCCCAACATGTTCG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
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| CDS-3UTR TCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATTGCGGGCGCCGAAGGTaGACACAACGTCGCCGTTGG | + |
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Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYCGRRR*TQRRRW Trigger: CCAACGGCGACGTTGTGTTCACCTTCGGCGCCCGCA...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR TCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCCCTGTCCGAGGTGCTaGCCAGCGCCACTAGACTCT | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCPCPRC*PAPLDS Trigger: AGAGTCTAGTGGCGCTGGTCAGCACCTCGGACAGGG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR TCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGCATTGCTGGAAAGCTaGGGGGAACCGCCGTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCALLES*GEPPSL Trigger: CAGCGACGGCGGTTCCCCTCAGCTTTCCAGCAATGC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCATCCCGGGCCTGGATaGGCGCCACAGCTGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYHPGPG*APQLCP Trigger: AGGACACAGCTGTGGCGCGCATCCAGGCCCGGGATG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGCCTCGCGTGGCTCCTaGTGCAGCAGATCAAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCASRGS*CSRSKA Trigger: GGCCTTTGATCTGCTGCAGCAGGAGCCACGCGAGGC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCCTTCTTGCGGCGGTTaGAGGTGGTGGCGATGGCGA | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCPSCGG*RWWRWR Trigger: TCGCCATCGCCACCACCTGCAACCGCCGCAAGAAGG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGGCCAGGTAGGCGCCTaGAGGGTTGTTTTCGCGGAC | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCGQVGA*RVVFAD Trigger: GTCCGCGAAAACAACCCTCCAGGCGCCTACCTGGCC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGGGAACCGCCGTCGCTaGCCTGGACACGCACGTCAA | + |
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Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYGNRRR*PGHARQ Trigger: TTGACGTGCGTGTCCAGGCCAGCGACGGCGGTTCCC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGGGTCCGGCACAGGATaGGCTCCAGCAGCGATCAGA | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCGSGTG*APAAIR Trigger: TCTGATCGCTGCTGGAGCCCATCCTGTGCCGGACCC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR TCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCTTGCTCTGGGCCACTaGGAGCACCCAGCAGAGACT | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCLALGH*EHPAET Trigger: AGTCTCTGCTGGGTGCTCTCAGTGGCCCAGAGCAAG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR TCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCCCTGTCCGAGGTGCTaGCCAGCGCCACTAGACTCT | + |
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Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYPCPRC*PAPLDS Trigger: AGAGTCTAGTGGCGCTGGTCAGCACCTCGGACAGGG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR TCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGGTAGCCGGGTCTACTaGGACGTAAGTGGACACGGC | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCGSRVY*DVSGHG Trigger: GCCGTGTCCACTTACGTCTCAGTAGACCCGGCTACC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR TCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGCATTGCTGGAAAGCTaGGGGGAACCGCCGTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYALLES*GEPPSL Trigger: CAGCGACGGCGGTTCCCCTCAGCTTTCCAGCAATGC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR TCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATTGGTGGCGATGGCGATaGTGGCTGCAAGCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYWWRWR*WLQAAA Trigger: CGCTGCTGCTTGCAGCCATCATCGCCATCGCCACCA...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR TCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCGCTGCCAGGGAAGGTaGGCACGTCGAACATGTTGG | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCRCQGR*ARRTCW Trigger: CCAACATGTTCGACGTGCTCACCTTCCCTGGCAGCG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
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| CDS-3UTR TCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATTGCTGCCCCTCGAAGTaGCAGGCGCTTTCCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYCCPSK*QALSPV Trigger: CACTGGGGAAAGCGCCTGTCACTTCGAGGGGCAGCA...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
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| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTACCTCCACCTCCACGTaGACCAGGCGGAACTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCTSTST*TRRNCS Trigger: GGAACAGTTCCGCCTGGTGCACGTGGAGGTGGAGGT...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCTCCCGGTCCAGAGATaGAGCGGTCACCACCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCLPVQR*SGHHQV Trigger: TACCTGGTGGTGACCGCTGCATCTCTGGACCGGGAG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGGTTGTACTCCGCGATaGGCTCCCGGTCCAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCGCTPR*APGPEM Trigger: CATCTCTGGACCGGGAGCGCATCGCGGAGTACAACC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGCCTCGCGTGGCTCCTaGTGCAGCAGATCAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYASRGS*CSRSKA Trigger: GGCCTTTGATCTGCTGCAGCAGGAGCCACGCGAGGC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCTGCAAGCAGCAGCGTaGAGCTCCCGGCTAACACGA | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCLQAAA*SSRLTR Trigger: TCGTGTTAGCCGGGAGCTGCACGCTGCTGCTTGCAG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATTGCGCACCTCCTTCTTaGGGCGGTTGCAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYCAPPS*GGCRWW Trigger: CCACCACCTGCAACCGCCGCAAGAAGGAGGTGCGCA...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
||
| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCGGACTGTCTTGCTCTaGGCCACTGAGAGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCRTVLL*ATESTQ Trigger: CTGGGTGCTCTCAGTGGCCCAGAGCAAGACAGTCCG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGGCCAGGTAGGCGCCTaGAGGGTTGTTTTCGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYGQVGA*RVVFAD Trigger: GTCCGCGAAAACAACCCTCCAGGCGCCTACCTGGCC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGGAGAAGGCCTCGCGTaGCTCCTGCTGCAGCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYGEGLA*LLLQQI Trigger: GATCTGCTGCAGCAGGAGCCACGCGAGGCCTTCTCC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTATGATCTCCCCCGTGTaGCGGCCTATGGAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCMISPV*RPMEKA Trigger: GGCCTTCTCCATAGGCCGCCACACGGGGGAGATCAT...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGCACGTCGAACATGTTaGGCCTGGGCCCAGTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYARRTC*AWAQFP Trigger: GGGGAACTGGGCCCAGGCCCAACATGTTCGACGTGC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
||
| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCTCCTTCCCGAAGCCTaGAGAGGCACCGTAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCLLPEA*RGTVRL Trigger: GAGCCTTACGGTGCCTCTCCAGGCTTCGGGAAGGAG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGGGTCCGGCACAGGATaGGCTCCAGCAGCGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYGSGTG*APAAIR Trigger: TCTGATCGCTGCTGGAGCCCATCCTGTGCCGGACCC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTAATCTCCTGCAGGTCTaGGAGCCTTCCTGGACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCNLLQV*EPSWTG Trigger: CCCCGTCCAGGAAGGCTCCCAGACCTGCAGGAGATT...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR TCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCTTGCTCTGGGCCACTaGGAGCACCCAGCAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYLALGH*EHPAET Trigger: AGTCTCTGCTGGGTGCTCTCAGTGGCCCAGAGCAAG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR TCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGGTAGCCGGGTCTACTaGGACGTAAGTGGACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYGSRVY*DVSGHG Trigger: GCCGTGTCCACTTACGTCTCAGTAGACCCGGCTACC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGGTTGTACTCCGCGATaGGCTCCCGGTCCAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYGCTPR*APGPEM Trigger: CATCTCTGGACCGGGAGCGCATCGCGGAGTACAACC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCACGAAACTGACGGTTaGAGTGGTGGTGAGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCHETDG*SGGERG Trigger: CCCCCTCTCACCACCACTGCAACCGTCAGTTTCGTG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCTGCAAGCAGCAGCGTaGAGCTCCCGGCTAACACGA | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYLQAAA*SSRLTR Trigger: TCGTGTTAGCCGGGAGCTGCACGCTGCTGCTTGCAG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGATGGCGATGATGGCTaGAAGCAGCAGCGTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCDGDDG*KQQRAA Trigger: AGCTGCACGCTGCTGCTTGCAGCCATCATCGCCATC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCGTAAGGCTCCTTCTTaGGGCGGTTGCAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYRKAPS*GGCRWW Trigger: CCACCACCTGCAACCGCCGCAAGAAGGAGCCTTACG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195355.2 |
||
| CDS-3UTR CCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGGAAAGCGGGGCGCGTaGTCGTTTACATCCCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYGKRGA*SFTSLT Trigger: GGTGAGGGATGTAAACGACCACGCGCCCCGCTTTCC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGCACCAGAGCATTGCTaGAAAGCTGAGGGGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCAPEHC*KAEGNR Trigger: GCGGTTCCCCTCAGCTTTCCAGCAATGCTCTGGTGC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCTCCTTCCCGAAGCCTaGAGAGGCACCGTAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYLLPEA*RGTVRL Trigger: GAGCCTTACGGTGCCTCTCCAGGCTTCGGGAAGGAG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATAATCTCCTGCAGGTCTaGGAGCCTTCCTGGACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYNLLQV*EPSWTG Trigger: CCCCGTCCAGGAAGGCTCCCAGACCTGCAGGAGATT...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR TCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCGCTGTCTTTCCCACTaGACTTCTCAGCTTCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCRCLSH*TSQLLG Trigger: GCCGAGAAGCTGAGAAGTTCAGTGGGAAAGACAGCG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR TCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTTCAAAGCGTCCCCGCTaGTGTCCGAGTCACTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCSKRPR*CPSHCH Trigger: ATGACAGTGACTCGGACATCAGCGGGGACGCTTTGA...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR TCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGCTCTTACAGAAGGTTaGCATCTGGGCTGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCALTEG*HLGWWV Trigger: CACCCACCAGCCCAGATGTCAACCTTCTGTAAGAGC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCTTGGTGAAGATCGGTaGGTTGTCGTTCTCGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCLGEDR*VVVLVP Trigger: GGGGACGAGAACGACAACGCACCGATCTTCACCAAG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCACGAAACTGACGGTTaGAGTGGTGGTGAGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYHETDG*SGGERG Trigger: CCCCCTCTCACCACCACTGCAACCGTCAGTTTCGTG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCCCGAGGCAGGGACGTaGTCTTACAGAAGGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCPEAGT*SYRRLT Trigger: TGTCAACCTTCTGTAAGAGCACGTCCCTGCCTCGGG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGCAACCCTACTGTCTTaGGGAGCTGGGCCTGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCATLLS*GAGPDS Trigger: ACTATCAGGCCCAGCTCCCCAAGACAGTAGGGTTGC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR TCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCGCTGTCTTTCCCACTaGACTTCTCAGCTTCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYRCLSH*TSQLLG Trigger: GCCGAGAAGCTGAGAAGTTCAGTGGGAAAGACAGCG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR TCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATTCAAAGCGTCCCCGCTaGTGTCCGAGTCACTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYSKRPR*CPSHCH Trigger: ATGACAGTGACTCGGACATCAGCGGGGACGCTTTGA...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR TCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGCTCTTACAGAAGGTTaGCATCTGGGCTGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYALTEG*HLGWWV Trigger: CACCCACCAGCCCAGATGTCAACCTTCTGTAAGAGC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTTGTATCGGACTGTCTTaGTCTGGGCCACTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCCIGLS*SGPLRA Trigger: TGCTCTCAGTGGCCCAGAGCAAGACAGTCCGATACA...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCTTGGTGAAGATCGGTaGGTTGTCGTTCTCGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYLGEDR*VVVLVP Trigger: GGGGACGAGAACGACAACGCACCGATCTTCACCAAG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCTTGCACCAGAGCATTaGTGGAAAGCTGAGGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCLAPEH*WKAEGN Trigger: GTTCCCCTCAGCTTTCCAGCAATGCTCTGGTGCAAG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCCCGAGGCAGGGACGTaGTCTTACAGAAGGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYPEAGT*SYRRLT Trigger: TGTCAACCTTCTGTAAGAGCACGTCCCTGCCTCGGG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTTCGGGGACACGTATCTaGTACCAGGAGGGGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCSGTRI*YQEGIH Trigger: ATGAATCCCCTCCTGGTAGCAGATACGTGTCCCCGA...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR TCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTACAAGGATCGGAGAATaGTCATTCTGGTCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCTRIGE*SFWSST Trigger: GGTGCTGGACCAGAATGATCATTCTCCGATCCTTGT...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATTGTATCGGACTGTCTTaGTCTGGGCCACTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYCIGLS*SGPLRA Trigger: TGCTCTCAGTGGCCCAGAGCAAGACAGTCCGATACA...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCATCCTCTTCGAACGTaGTGTATCGGACTGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCHPLRT*CIGLSC Trigger: GCAAGACAGTCCGATACAGCACGTTCGAAGAGGATG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCTTGCACCAGAGCATTaGTGGAAAGCTGAGGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYLAPEH*WKAEGN Trigger: GTTCCCCTCAGCTTTCCAGCAATGCTCTGGTGCAAG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGCCCACAGTCCACTCTaGATGTGGTTGATGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYAHSPL*MWLMRS Trigger: AGACCTCATCAACCACATGCAGAGTGGACTGTGGGC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGATAGTAATTGTCCCTaGGCAGAGGATCCCGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYDSNCP*AEDPEA Trigger: TGCCTCGGGATCCTCTGCGCAGGGACAATTACTATC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCATCCTCTTCGAACGTaGTGTATCGGACTGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYHPLRT*CIGLSC Trigger: GCAAGACAGTCCGATACAGCACGTTCGAAGAGGATG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR TCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCCGAGTCACTGTCATTaGAATCACTGTCTCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYPSHCH*NHCLLC Trigger: GCAAAGGAGACAGTGATTTCAATGACAGTGACTCGG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCAGAGACTAAATAGCTaGAAGGGGAAAAGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYQRLNS*KGKRQG Trigger: CCCTTGCCTTTTCCCCTTGCAGCTATTTAGTCTCTG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR GCA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTAGAGAGCTGTTGAATTaGTTCATCAGGCGGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCRELLN*FIRRKL Trigger: AAGCTTCCGCCTGATGAAGCAATTCAACAGCTCTCT...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR GCA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATAGAGAGCTGTTGAATTaGTTCATCAGGCGGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYRELLN*FIRRKL Trigger: AAGCTTCCGCCTGATGAAGCAATTCAACAGCTCTCT...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS GCA 90 bp | CTGTGTCCCGGACCCAGTCGACGAGGCCGCGTCCGCTCCTCCGAGTaGGGCGGCAGCGGCGGCGGCGGCGAAGGGCGAGGTGGCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LCPGPSRRGRVRSSE*GGSGGGGEGRGGWS Trigger: GCTCCAGCCACCTCGCCCTTCGCCGCCGCCGCCGCTGCCGCCGCACTCGGAGGAGCGGACGCGGCCTCGTCGACTGGGTCCGGGACACAG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 90 bp | TCCGAGTGCGGCGGCAGCGGCGGCGGCGGCGAAGGGCGAGGTGGCTaGAGCCCCCGGGGCGGCCAGAGGAGTGATAGAAATTTCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SECGGSGGGGEGRGG*SPRGGQRSDRNFRS Trigger: GCTCCTGAAATTTCTATCACTCCTCTGGCCGCCCCGGGGGCTCCAGCCACCTCGCCCTTCGCCGCCGCCGCCGCTGCCGCCGCACTCGGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS TCA 90 bp | CGGCCGCGGGGCTGCCAAAGGGCGCTTTGCCGCTGCCAGGGAAGGTaGGCACGTCGAACATGTTGGGCCTGGGCCCAGTTCCCCTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RPRGCQRALCRCQGR*ARRTCWAWAQFPWR Trigger: CCGCCAGGGGAACTGGGCCCAGGCCCAACATGTTCGACGTGCTCACCTTCCCTGGCAGCGGCAAAGCGCCCTTTGGCAGCCCCGCGGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
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| CDS GCA 90 bp | CAGCTCCCGGCTAACACGATGATGACGATCAGCGGCGTGTCCCACTaGAGCGAAGGCCCCGACGGCGCGAGGCGAGAGCCGGGTGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QLPANTMMTISGVSH*SEGPDGARREPGGR Trigger: CCGGCCACCCGGCTCTCGCCTCGCGCCGTCGGGGCCTTCGCTGCAGTGGGACACGCCGCTGATCGTCATCATCGTGTTAGCCGGGAGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 90 bp | CCTCGCGTGGCTCCTGCTGCAGCAGATCAAAGGCCAGTTCCCCGTTaGCTCCTTCGTCAGCATCCCGGGCCTGGATGCGCGCCACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRVAPAAADQRPVPR*LLRQHPGPGCAPQL Trigger: CAGCTGTGGCGCGCATCCAGGCCCGGGATGCTGACGAAGGAGCCAACGGGGAACTGGCCTTTGATCTGCTGCAGCAGGAGCCACGCGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS GCA 90 bp | AGGCCAGTTCCCCGTTGGCTCCTTCGTCAGCATCCCGGGCCTGGATaGGCGCCACAGCTGTGTCCTTGGTGGAACGTCCAGGGACCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RPVPRWLLRQHPGPG*APQLCPWWNVQGPL Trigger: TAGCGGTCCCTGGACGTTCCACCAAGGACACAGCTGTGGCGCGCATCCAGGCCCGGGATGCTGACGAAGGAGCCAACGGGGAACTGGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS GCA 90 bp | TCCCCCGTGTGGCGGCCTATGGAGAAGGCCTCGCGTGGCTCCTGCTaGAGCAGATCAAAGGCCAGTTCCCCGTTGGCTCCTTCGTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPVWRPMEKASRGSC*SRSKASSPLAPSSA Trigger: TGCTGACGAAGGAGCCAACGGGGAACTGGCCTTTGATCTGCTGCAGCAGGAGCCACGCGAGGCCTTCTCCATAGGCCGCCACACGGGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 90 bp | TCAAAGGCCAGTTCCCCGTTGGCTCCTTCGTCAGCATCCCGGGCCTaGATGCGCGCCACAGCTGTGTCCTTGGTGGAACGTCCAGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SKASSPLAPSSASRA*MRATAVSLVERPGT Trigger: GGTCCCTGGACGTTCCACCAAGGACACAGCTGTGGCGCGCATCCAGGCCCGGGATGCTGACGAAGGAGCCAACGGGGAACTGGCCTTTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 90 bp | GGAGGCTCCTGCGAGAGGTCTCCAGTAAGCATGATCTCCCCCGTGTaGCGGCCTATGGAGAAGGCCTCGCGTGGCTCCTGCTGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GGSCERSPVSMISPV*RPMEKASRGSCCSR Trigger: TCTGCTGCAGCAGGAGCCACGCGAGGCCTTCTCCATAGGCCGCCACACGGGGGAGATCATGCTTACTGGAGACCTCTCGCAGGAGCCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS TCA 90 bp | TTCTGGTCCAGCACCCGCACTTGCACCAGAGCATTGCTGGAAAGCTaGGGGGAACCGCCGTCGCTGGCCTGGACACGCACGTCAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FWSSTRTCTRALLES*GEPPSLAWTRTSSW Trigger: CCAGCTTGACGTGCGTGTCCAGGCCAGCGACGGCGGTTCCCCTCAGCTTTCCAGCAATGCTCTGGTGCAAGTGCGGGTGCTGGACCAGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS GCA 90 bp | ATCTCCCCCGTGTGGCGGCCTATGGAGAAGGCCTCGCGTGGCTCCTaGTGCAGCAGATCAAAGGCCAGTTCCCCGTTGGCTCCTTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ISPVWRPMEKASRGS*CSRSKASSPLAPSS Trigger: TGACGAAGGAGCCAACGGGGAACTGGCCTTTGATCTGCTGCAGCAGGAGCCACGCGAGGCCTTCTCCATAGGCCGCCACACGGGGGAGAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS GCA 90 bp | TCGGATATGACCAGCAGGGCCTTGAACACGCGGCCAGGAGGCTCCTaGGAGAGGTCTCCAGTAAGCATGATCTCCCCCGTGTGGCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SDMTSRALNTRPGGS*ERSPVSMISPVWRP Trigger: AGGCCGCCACACGGGGGAGATCATGCTTACTGGAGACCTCTCGCAGGAGCCTCCTGGCCGCGTGTTCAAGGCCCTGCTGGTCATATCCGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 90 bp | AAGCATGATCTCCCCCGTGTGGCGGCCTATGGAGAAGGCCTCGCGTaGCTCCTGCTGCAGCAGATCAAAGGCCAGTTCCCCGTTGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KHDLPRVAAYGEGLA*LLLQQIKGQFPVGS Trigger: GGAGCCAACGGGGAACTGGCCTTTGATCTGCTGCAGCAGGAGCCACGCGAGGCCTTCTCCATAGGCCGCCACACGGGGGAGATCATGCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS GCA 90 bp | GAGAATGATCATTCTGGTCCAGCACCCGCACTTGCACCAGAGCATTaGTGGAAAGCTGAGGGGAACCGCCGTCGCTGGCCTGGACACGCA | + |
|
Preference number: 5 (lower is better) Translates to: ENDHSGPAPALAPEH*WKAEGNRRRWPGHA Trigger: TGCGTGTCCAGGCCAGCGACGGCGGTTCCCCTCAGCTTTCCAGCAATGCTCTGGTGCAAGTGCGGGTGCTGGACCAGAATGATCATTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 90 bp | CTTGCACCAGAGCATTGCTGGAAAGCTGAGGGGAACCGCCGTCGCTaGCCTGGACACGCACGTCAAGCTGGCGCAGAGTCTCATAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LAPEHCWKAEGNRRR*PGHARQAGAESHSQ Trigger: TTGACTATGAGACTCTGCGCCAGCTTGACGTGCGTGTCCAGGCCAGCGACGGCGGTTCCCCTCAGCTTTCCAGCAATGCTCTGGTGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 90 bp | AATGATCATTCTGGTCCAGCACCCGCACTTGCACCAGAGCATTGCTaGAAAGCTGAGGGGAACCGCCGTCGCTGGCCTGGACACGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: NDHSGPAPALAPEHC*KAEGNRRRWPGHAR Trigger: ACGTGCGTGTCCAGGCCAGCGACGGCGGTTCCCCTCAGCTTTCCAGCAATGCTCTGGTGCAAGTGCGGGTGCTGGACCAGAATGATCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS TCA 90 bp | CCACTGAACTTCTCAGCTTCTCGGCCCGAGATGGTGTTGAATGAATaGCCCTTCCAGACTGCAACAGGGGGCGCAGCAGGCTCCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PLNFSASRPEMVLNE*PFQTATGGAAGSFP Trigger: CGGGAAGGAGCCTGCTGCGCCCCCTGTTGCAGTCTGGAAGGGTCATTCATTCAACACCATCTCGGGCCGAGAAGCTGAGAAGTTCAGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS GCA 90 bp | CCTGATAGTAATTGTCCCTGCGCAGAGGATCCCGAGGCAGGGACGTaGTCTTACAGAAGGTTGACATCTGGGCTGGTGGGTGAGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PDSNCPCAEDPEAGT*SYRRLTSGLVGEEG Trigger: CCCCTCCTCACCCACCAGCCCAGATGTCAACCTTCTGTAAGAGCACGTCCCTGCCTCGGGATCCTCTGCGCAGGGACAATTACTATCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS TCA 90 bp | TCTAGGGAGCCATTAGCCGGCGCCGGATGCACAAGGATCGGAGAATaGTCATTCTGGTCCAGCACCCGCACTTGCACCAGAGCATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SREPLAGAGCTRIGE*SFWSSTRTCTRALL Trigger: CAGCAATGCTCTGGTGCAAGTGCGGGTGCTGGACCAGAATGATCATTCTCCGATCCTTGTGCATCCGGCGCCGGCTAATGGCTCCCTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS TCA 90 bp | TGTACGTTGGGTCCGGCACAGGATGGGCTCCAGCAGCGATCAGAATaGCCTAGGATCTTGCACTCAGCAGTACACGCCCACAGTCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: CTLGPAQDGLQQRSE*PRILHSAVHAHSPL Trigger: GAGTGGACTGTGGGCGTGTACTGCTGAGTGCAAGATCCTAGGTCATTCTGATCGCTGCTGGAGCCCATCCTGTGCCGGACCCAACGTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS GCA 90 bp | GCAACCCTACTGTCTTGGGGAGCTGGGCCTGATAGTAATTGTCCCTaGGCAGAGGATCCCGAGGCAGGGACGTGCTCTTACAGAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ATLLSWGAGPDSNCP*AEDPEAGTCSYRRL Trigger: CAACCTTCTGTAAGAGCACGTCCCTGCCTCGGGATCCTCTGCGCAGGGACAATTACTATCAGGCCCAGCTCCCCAAGACAGTAGGGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 90 bp | CCAGGGGCATCCTCTTCGAACGTGCTGTATCGGACTGTCTTGCTCTaGGCCACTGAGAGCACCCAGCAGAGACTAAATAGCTGCAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGASSSNVLYRTVLL*ATESTQQRLNSCKG Trigger: CCCCTTGCAGCTATTTAGTCTCTGCTGGGTGCTCTCAGTGGCCCAGAGCAAGACAGTCCGATACAGCACGTTCGAAGAGGATGCCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS TCA 90 bp | TTTCCCACTGAACTTCTCAGCTTCTCGGCCCGAGATGGTGTTGAATaGATGACCCTTCCAGACTGCAACAGGGGGCGCAGCAGGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FPTELLSFSARDGVE*MTLPDCNRGRSRLL Trigger: AAGGAGCCTGCTGCGCCCCCTGTTGCAGTCTGGAAGGGTCATTCATTCAACACCATCTCGGGCCGAGAAGCTGAGAAGTTCAGTGGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS GCA 90 bp | CAGGCGGAAGCTTGTGTCTCCAGACACTTTCATGTGCAGGTCTTCTaGAAGGGTTCCGATGACTGTGCCAGGGGCATCCTCTTCGAACGT | + |
|
Preference number: 5 (lower is better) Translates to: QAEACVSRHFHVQVF*KGSDDCARGILFER Trigger: ACGTTCGAAGAGGATGCCCCTGGCACAGTCATCGGAACCCTTGCAGAAGACCTGCACATGAAAGTGTCTGGAGACACAAGCTTCCGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CAA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCCCTGGACCTCGGTCTaGAGCCCGCACGTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCPWTSV*SPHVQL Trigger: GAGCTGGACGTGCGGGCTCAAGACCGAGGTCCAGGG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS TCA 90 bp | TGTCTCCAGACACTTTCATGTGCAGGTCTTCTGCAAGGGTTCCGATaGCTGTGCCAGGGGCATCCTCTTCGAACGTGCTGTATCGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: CLQTLSCAGLLQGFR*LCQGHPLRTCCIGL Trigger: CAGTCCGATACAGCACGTTCGAAGAGGATGCCCCTGGCACAGTCATCGGAACCCTTGCAGAAGACCTGCACATGAAAGTGTCTGGAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CAA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCCCTGGACCTCGGTCTaGAGCCCGCACGTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYPWTSV*SPHVQL Trigger: GAGCTGGACGTGCGGGCTCAAGACCGAGGTCCAGGG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CAA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTTCCTTCTTGCGGCGGTaGCAGGTGGTGGCGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCSFLRR*QVVAMA Trigger: CGCCATCGCCACCACCTGCAACCGCCGCAAGAAGGA...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS GCA 90 bp | AATTGCTTCATCAGGCGGAAGCTTGTGTCTCCAGACACTTTCATGTaGAGGTCTTCTGCAAGGGTTCCGATGACTGTGCCAGGGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: NCFIRRKLVSPDTFM*RSSARVPMTVPGAS Trigger: GGATGCCCCTGGCACAGTCATCGGAACCCTTGCAGAAGACCTGCACATGAAAGTGTCTGGAGACACAAGCTTCCGCCTGATGAAGCAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 90 bp | CTCTATGCAGTACTTTCTCATAGACGCTCTGCAACCCTACTGTCTTaGGGAGCTGGGCCTGATAGTAATTGTCCCTGCGCAGAGGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LYAVLSHRRSATLLS*GAGPDSNCPCAEDP Trigger: GGGATCCTCTGCGCAGGGACAATTACTATCAGGCCCAGCTCCCCAAGACAGTAGGGTTGCAGAGCGTCTATGAGAAAGTACTGCATAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CAA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTCAGGCGGTAGGTGACTaGACCGTTGCGACCCACGTC | + |
|
Preference number: 5 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCQAVGD*TVATHV Trigger: GACGTGGGTCGCAACGGTCAAGTCACCTACCGCCTG...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CAA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGCCACAGCTGTGTCCTaGGTGGAACGTCCAGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCATAVS*VERPGT Trigger: GGTCCCTGGACGTTCCACCAAGGACACAGCTGTGGC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CAA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATTCCTTCTTGCGGCGGTaGCAGGTGGTGGCGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYSFLRR*QVVAMA Trigger: CGCCATCGCCACCACCTGCAACCGCCGCAAGAAGGA...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CAA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTAGCACGTCGAACATGTaGGGCCTGGGCCCAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCSTSNM*GLGPVP Trigger: GGGAACTGGGCCCAGGCCCAACATGTTCGACGTGCT...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
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| CDS-3UTR CAA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCTGCCAAAGGGCGCTTaGCCGCTGCCAGGGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYLPKGA*PLPGKV Trigger: CACCTTCCCTGGCAGCGGCAAAGCGCCCTTTGGCAG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
||
| CDS-3UTR CAA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGCGCACGATAACCTaGCAGGTGGCTGTCCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYMRTIT*QVAVRG Trigger: GCCCCGGACAGCCACCTGCAAGGTTATCGTGCGCAT...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CAA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTTCAGGAGCGTTGTCGTaGACGTCTCGGATGCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCSGALS*TSRMRT Trigger: CGTGCGCATCCGAGACGTCAACGACAACGCTCCTGA...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CAA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATCAGGCGGTAGGTGACTaGACCGTTGCGACCCACGTC | + |
|
Preference number: 5 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYQAVGD*TVATHV Trigger: GACGTGGGTCGCAACGGTCAAGTCACCTACCGCCTG...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS-3UTR CAA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGCCACAGCTGTGTCCTaGGTGGAACGTCCAGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYATAVS*VERPGT Trigger: GGTCCCTGGACGTTCCACCAAGGACACAGCTGTGGC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CAA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATTTGCGCACCTCCTTCTaGCGGCGGTTGCAGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYLRTSF*RRLQVV Trigger: CACCACCTGCAACCGCCGCAAGAAGGAGGTGCGCAA...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
||
| CDS-3UTR CAA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATTCAGGAGCGTTGTCGTaGACGTCTCGGATGCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYSGALS*TSRMRT Trigger: CGTGCGCATCCGAGACGTCAACGACAACGCTCCTGA...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CAA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGTGAAGATCGGTGCGTaGTCGTTCTCGTCCCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYVKIGA*SFSSPT Trigger: AGTGGGGGACGAGAACGACAACGCACCGATCTTCAC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CAA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTTCATCAGGCGGAAGCTaGTGTCTCCAGACACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCSSGGS*CLQTLS Trigger: TGAAAGTGTCTGGAGACACAAGCTTCCGCCTGATGA...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CAA 90 bp | ACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATATGTGTGAAATTTCAGGAGCGTaGTCGTTGACGTCTCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TLKPVNNLGTCQGDLYMCEISGA*SLTSRM Trigger: CATCCGAGACGTCAACGACAACGCTCCTGAAATTTC...ACACATATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CAA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATTGCTCTTACAGAAGGTaGACATCTGGGCTGGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYCSYRR*TSGLVG Trigger: ACCCACCAGCCCAGATGTCAACCTTCTGTAAGAGCA...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CAA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATTCATCAGGCGGAAGCTaGTGTCTCCAGACACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYSSGGS*CLQTLS Trigger: TGAAAGTGTCTGGAGACACAAGCTTCCGCCTGATGA...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CAA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATGAAATTTCAGGAGCGTaGTCGTTGACGTCTCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYEISGA*SLTSRM Trigger: CATCCGAGACGTCAACGACAACGCTCCTGAAATTTC...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS-3UTR CAA 90 bp | TATACAACACTGAAACCGGTCAATAACTTAGGGACGTGTCAGGGTGACCTGTATAAATCACTGTCTCCTTaGCCGCTGTCTTTCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: YTTLKPVNNLGTCQGDLYKSLSP*PLSFPL Trigger: CAGTGGGAAAGACAGCGGCAAAGGAGACAGTGATTT...ATACAGGTCACCCTGACACGTCCCTAAGTTATTGACCGGTTTCAGTGTTGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS GCA 72 bp | GGACCCAGTCGACGAGGCCGCGTCCGCTCCTCCGAGTaGGGCGGCAGCGGCGGCGGCGGCGAAGGGCGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GPSRRGRVRSSE*GGSGGGGEGRG Trigger: ACCTCGCCCTTCGCCGCCGCCGCCGCTGCCGCCGCACTCGGAGGAGCGGACGCGGCCTCGTCGACTGGGTCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS GCA 72 bp | GCCCCTCGAAGTGACAGGCGCTTTCCCCAGTGGCGCTaGCGCCCTCCGAGCCCGGCACTTCGGCCGCGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: APRSDRRFPQWR*RPPSPALRPRR Trigger: TCGCCGCGGCCGAAGTGCCGGGCTCGGAGGGCGGCAGCGCCACTGGGGAAAGCGCCTGTCACTTCGAGGGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
||
| CDS CCA 72 bp | GCTGCTGCCCCTCGAAGTGACAGGCGCTTTCCCCAGTaGCGCTGCCGCCCTCCGAGCCCGGCACTTCGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AAAPRSDRRFPQ*RCRPPSPALRP Trigger: CGGCCGAAGTGCCGGGCTCGGAGGGCGGCAGCGCCACTGGGGAAAGCGCCTGTCACTTCGAGGGGCAGCAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
||
| CDS CAA 90 bp | ACCGCGGGCGGGGGCGCGTCGGCCGCGGGGCTGCCAAAGGGCGCTTaGCCGCTGCCAGGGAAGGTGAGCACGTCGAACATGTTGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: TAGGGASAAGLPKGA*PLPGKVSTSNMLGL Trigger: CAGGCCCAACATGTTCGACGTGCTCACCTTCCCTGGCAGCGGCAAAGCGCCCTTTGGCAGCCCCGCGGCCGACGCGCCCCCGCCCGCGGT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
||
| CDS CAA 72 bp | GGGGGCGCGTCGGCCGCGGGGCTGCCAAAGGGCGCTTaGCCGCTGCCAGGGAAGGTGAGCACGTCGAACATG | + |
|
Preference number: 6 (lower is better) Translates to: GGASAAGLPKGA*PLPGKVSTSNM Trigger: CATGTTCGACGTGCTCACCTTCCCTGGCAGCGGCAAAGCGCCCTTTGGCAGCCCCGCGGCCGACGCGCCCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
||
| CDS CCA 72 bp | TGCAACAGGGGGCGCAGCAGGCTCCTTCCCGAAGCCTaGAGAGGCACCGTAAGGCTCGGCGTGCGCGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: CNRGRSRLLPEA*RGTVRLGVRAS Trigger: CGAGGCGCGCACGCCGAGCCTTACGGTGCCTCTCCAGGCTTCGGGAAGGAGCCTGCTGCGCCCCCTGTTGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
||
| CDS CAA 72 bp | GGGGGACGGCCGCCGTCGGATATGACCAGCAGGGCCTaGAACACGCGGCCAGGAGGCTCCTGCGAGAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GGRPPSDMTSRA*NTRPGGSCERS Trigger: AGACCTCTCGCAGGAGCCTCCTGGCCGCGTGTTCAAGGCCCTGCTGGTCATATCCGACGGCGGCCGTCCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS TCA 72 bp | CAGAGCGGCCCACTTCGGCCTCTACCAGGCGGTAGGTaGCTTGACCGTTGCGACCCACGTCAGGGTCGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: QSGPLRPLPGGR*LDRCDPRQGRG Trigger: CCCGCGACCCTGACGTGGGTCGCAACGGTCAAGTCACCTACCGCCTGGTAGAGGCCGAAGTGGGCCGCTCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS GCA 72 bp | GCTAACACGATGATGACGATCAGCGGCGTGTCCCACTaGAGCGAAGGCCCCGACGGCGCGAGGCGAGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ANTMMTISGVSH*SEGPDGARREP Trigger: CGGCTCTCGCCTCGCGCCGTCGGGGCCTTCGCTGCAGTGGGACACGCCGCTGATCGTCATCATCGTGTTAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS CAA 90 bp | GCCTCGCGTGGCTCCTGCTGCAGCAGATCAAAGGCCAGTTCCCCGTaGGCTCCTTCGTCAGCATCCCGGGCCTGGATGCGCGCCACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASRGSCCSRSKASSP*APSSASRAWMRATA Trigger: AGCTGTGGCGCGCATCCAGGCCCGGGATGCTGACGAAGGAGCCAACGGGGAACTGGCCTTTGATCTGCTGCAGCAGGAGCCACGCGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CAA 90 bp | GTGGTGAGAGGGGGACGGCCGCCGTCGGATATGACCAGCAGGGCCTaGAACACGCGGCCAGGAGGCTCCTGCGAGAGGTCTCCAGTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: VVRGGRPPSDMTSRA*NTRPGGSCERSPVS Trigger: GCTTACTGGAGACCTCTCGCAGGAGCCTCCTGGCCGCGTGTTCAAGGCCCTGCTGGTCATATCCGACGGCGGCCGTCCCCCTCTCACCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS GCA 72 bp | CCCCGTTGGCTCCTTCGTCAGCATCCCGGGCCTGGATaGGCGCCACAGCTGTGTCCTTGGTGGAACGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PRWLLRQHPGPG*APQLCPWWNVQ Trigger: CTGGACGTTCCACCAAGGACACAGCTGTGGCGCGCATCCAGGCCCGGGATGCTGACGAAGGAGCCAACGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 72 bp | GCGCACGATAACCTTGCAGGTGGCTGTCCGGGGCCCTaGACCTCGGTCTTGAGCCCGCACGTCCAGCTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: AHDNLAGGCPGP*TSVLSPHVQLV Trigger: TACGAGCTGGACGTGCGGGCTCAAGACCGAGGTCCAGGGCCCCGGACAGCCACCTGCAAGGTTATCGTGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 72 bp | CTCCCCCGTGTGGCGGCCTATGGAGAAGGCCTCGCGTaGCTCCTGCTGCAGCAGATCAAAGGCCAGTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPRVAAYGEGLA*LLLQQIKGQFP Trigger: GGGGAACTGGCCTTTGATCTGCTGCAGCAGGAGCCACGCGAGGCCTTCTCCATAGGCCGCCACACGGGGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CAA 90 bp | AAGGGCGCTTTGCCGCTGCCAGGGAAGGTGAGCACGTCGAACATGTaGGGCCTGGGCCCAGTTCCCCTGGCGGTTTCATCCGGGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: KGALPLPGKVSTSNM*GLGPVPLAVSSGEP Trigger: TGGCTCCCCGGATGAAACCGCCAGGGGAACTGGGCCCAGGCCCAACATGTTCGACGTGCTCACCTTCCCTGGCAGCGGCAAAGCGCCCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
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| CDS TCA 72 bp | CCTTCTTGCGGCGGTTGCAGGTGGTGGCGATGGCGATaGTGGCTGCAAGCAGCAGCGTGCAGCTCCCGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PSCGGCRWWRWR*WLQAAACSSRL Trigger: TAGCCGGGAGCTGCACGCTGCTGCTTGCAGCCATCATCGCCATCGCCACCACCTGCAACCGCCGCAAGAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS TCA 72 bp | GGCTGCCAAAGGGCGCTTTGCCGCTGCCAGGGAAGGTaGGCACGTCGAACATGTTGGGCCTGGGCCCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GCQRALCRCQGR*ARRTCWAWAQF Trigger: GAACTGGGCCCAGGCCCAACATGTTCGACGTGCTCACCTTCCCTGGCAGCGGCAAAGCGCCCTTTGGCAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
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| CDS CCA 72 bp | CCCGGGCCTGGATGCGCGCCACAGCTGTGTCCTTGGTaGAACGTCCAGGGACCGCTACTTCTAGGGAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PGPGCAPQLCPW*NVQGPLLLGSH Trigger: ATGGCTCCCTAGAAGTAGCGGTCCCTGGACGTTCCACCAAGGACACAGCTGTGGCGCGCATCCAGGCCCGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 72 bp | CATCCCGGGCCTGGATGCGCGCCACAGCTGTGTCCTTaGTGGAACGTCCAGGGACCGCTACTTCTAGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HPGPGCAPQLCP*WNVQGPLLLGS Trigger: GCTCCCTAGAAGTAGCGGTCCCTGGACGTTCCACCAAGGACACAGCTGTGGCGCGCATCCAGGCCCGGGATG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 72 bp | TGCAACAGGGGGCGCAGCAGGCTCCTTCCCGAAGCCTaGAGAGGCACCGTAAGGCTCCTTCTTGCGGCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: CNRGRSRLLPEA*RGTVRLLLAAV Trigger: AACCGCCGCAAGAAGGAGCCTTACGGTGCCTCTCCAGGCTTCGGGAAGGAGCCTGCTGCGCCCCCTGTTGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195355.2 |
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| CDS CAA 72 bp | GCATCCCGGGCCTGGATGCGCGCCACAGCTGTGTCCTaGGTGGAACGTCCAGGGACCGCTACTTCTAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ASRAWMRATAVS*VERPGTATSRE Trigger: CTCCCTAGAAGTAGCGGTCCCTGGACGTTCCACCAAGGACACAGCTGTGGCGCGCATCCAGGCCCGGGATGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CAA 72 bp | GGCTCCTGCTGCAGCAGATCAAAGGCCAGTTCCCCGTaGGCTCCTTCGTCAGCATCCCGGGCCTGGATGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GSCCSRSKASSP*APSSASRAWMR Trigger: GCGCATCCAGGCCCGGGATGCTGACGAAGGAGCCAACGGGGAACTGGCCTTTGATCTGCTGCAGCAGGAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS GCA 72 bp | TGGCGGCCTATGGAGAAGGCCTCGCGTGGCTCCTGCTaGAGCAGATCAAAGGCCAGTTCCCCGTTGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WRPMEKASRGSC*SRSKASSPLAP Trigger: AGGAGCCAACGGGGAACTGGCCTTTGATCTGCTGCAGCAGGAGCCACGCGAGGCCTTCTCCATAGGCCGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS GCA 72 bp | GTGTGGCGGCCTATGGAGAAGGCCTCGCGTGGCTCCTaGTGCAGCAGATCAAAGGCCAGTTCCCCGTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VWRPMEKASRGS*CSRSKASSPLA Trigger: AGCCAACGGGGAACTGGCCTTTGATCTGCTGCAGCAGGAGCCACGCGAGGCCTTCTCCATAGGCCGCCACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS GCA 72 bp | ACCAGCAGGGCCTTGAACACGCGGCCAGGAGGCTCCTaGGAGAGGTCTCCAGTAAGCATGATCTCCCCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: TSRALNTRPGGS*ERSPVSMISPV Trigger: CACGGGGGAGATCATGCTTACTGGAGACCTCTCGCAGGAGCCTCCTGGCCGCGTGTTCAAGGCCCTGCTGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 72 bp | GAGCATTGCTGGAAAGCTGAGGGGAACCGCCGTCGCTaGCCTGGACACGCACGTCAAGCTGGCGCAGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: EHCWKAEGNRRR*PGHARQAGAES Trigger: AGACTCTGCGCCAGCTTGACGTGCGTGTCCAGGCCAGCGACGGCGGTTCCCCTCAGCTTTCCAGCAATGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 72 bp | TCTGGTCCAGCACCCGCACTTGCACCAGAGCATTGCTaGAAAGCTGAGGGGAACCGCCGTCGCTGGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGPAPALAPEHC*KAEGNRRRWPG Trigger: TCCAGGCCAGCGACGGCGGTTCCCCTCAGCTTTCCAGCAATGCTCTGGTGCAAGTGCGGGTGCTGGACCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 72 bp | AGTTCCCCGTTGGCTCCTTCGTCAGCATCCCGGGCCTaGATGCGCGCCACAGCTGTGTCCTTGGTGGAACGT | + |
|
Preference number: 6 (lower is better) Translates to: SSPLAPSSASRA*MRATAVSLVER Trigger: ACGTTCCACCAAGGACACAGCTGTGGCGCGCATCCAGGCCCGGGATGCTGACGAAGGAGCCAACGGGGAACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 72 bp | TGCGAGAGGTCTCCAGTAAGCATGATCTCCCCCGTGTaGCGGCCTATGGAGAAGGCCTCGCGTGGCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CERSPVSMISPV*RPMEKASRGSC Trigger: GCAGGAGCCACGCGAGGCCTTCTCCATAGGCCGCCACACGGGGGAGATCATGCTTACTGGAGACCTCTCGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CAA 72 bp | GCGTTGTCGTTGACGTCTCGGATGCGCACGATAACCTaGCAGGTGGCTGTCCGGGGCCCTGGACCTCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ALSLTSRMRTIT*QVAVRGPGPRS Trigger: AGACCGAGGTCCAGGGCCCCGGACAGCCACCTGCAAGGTTATCGTGCGCATCCGAGACGTCAACGACAACGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CAA 72 bp | TTGCCGCTGCCAGGGAAGGTGAGCACGTCGAACATGTaGGGCCTGGGCCCAGTTCCCCTGGCGGTTTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LPLPGKVSTSNM*GLGPVPLAVSS Trigger: GGATGAAACCGCCAGGGGAACTGGGCCCAGGCCCAACATGTTCGACGTGCTCACCTTCCCTGGCAGCGGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039568.11 |
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| CDS CAA 90 bp | CCTTCGTCAGCATCCCGGGCCTGGATGCGCGCCACAGCTGTGTCCTaGGTGGAACGTCCAGGGACCGCTACTTCTAGGGAGCCATTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PSSASRAWMRATAVS*VERPGTATSREPLA Trigger: GGCTAATGGCTCCCTAGAAGTAGCGGTCCCTGGACGTTCCACCAAGGACACAGCTGTGGCGCGCATCCAGGCCCGGGATGCTGACGAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS GCA 72 bp | CATTCTGGTCCAGCACCCGCACTTGCACCAGAGCATTaGTGGAAAGCTGAGGGGAACCGCCGTCGCTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: HSGPAPALAPEH*WKAEGNRRRWP Trigger: AGGCCAGCGACGGCGGTTCCCCTCAGCTTTCCAGCAATGCTCTGGTGCAAGTGCGGGTGCTGGACCAGAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS TCA 72 bp | GGTCCGGCACAGGATGGGCTCCAGCAGCGATCAGAATaGCCTAGGATCTTGCACTCAGCAGTACACGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GPAQDGLQQRSE*PRILHSAVHAH Trigger: GTGGGCGTGTACTGCTGAGTGCAAGATCCTAGGTCATTCTGATCGCTGCTGGAGCCCATCCTGTGCCGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS TCA 72 bp | CCATTAGCCGGCGCCGGATGCACAAGGATCGGAGAATaGTCATTCTGGTCCAGCACCCGCACTTGCACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PLAGAGCTRIGE*SFWSSTRTCTR Trigger: TCTGGTGCAAGTGCGGGTGCTGGACCAGAATGATCATTCTCCGATCCTTGTGCATCCGGCGCCGGCTAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS TCA 72 bp | TTCTCAGCTTCTCGGCCCGAGATGGTGTTGAATGAATaGCCCTTCCAGACTGCAACAGGGGGCGCAGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FSASRPEMVLNE*PFQTATGGAAG Trigger: GCCTGCTGCGCCCCCTGTTGCAGTCTGGAAGGGTCATTCATTCAACACCATCTCGGGCCGAGAAGCTGAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS CAA 72 bp | GGGGCATCCTCTTCGAACGTGCTGTATCGGACTGTCTaGCTCTGGGCCACTGAGAGCACCCAGCAGAGACTA | + |
|
Preference number: 6 (lower is better) Translates to: GASSSNVLYRTV*LWATESTQQRL Trigger: TAGTCTCTGCTGGGTGCTCTCAGTGGCCCAGAGCAAGACAGTCCGATACAGCACGTTCGAAGAGGATGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS CAA 90 bp | ACTGTGCCAGGGGCATCCTCTTCGAACGTGCTGTATCGGACTGTCTaGCTCTGGGCCACTGAGAGCACCCAGCAGAGACTAAATAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TVPGASSSNVLYRTV*LWATESTQQRLNSC Trigger: GCAGCTATTTAGTCTCTGCTGGGTGCTCTCAGTGGCCCAGAGCAAGACAGTCCGATACAGCACGTTCGAAGAGGATGCCCCTGGCACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
||
| CDS CAA 90 bp | ATGCACAAGGATCGGAGAATGATCATTCTGGTCCAGCACCCGCACTaGCACCAGAGCATTGCTGGAAAGCTGAGGGGAACCGCCGTCGCT | + |
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Preference number: 6 (lower is better) Translates to: MHKDRRMIILVQHPH*HQSIAGKLRGTAVA Trigger: AGCGACGGCGGTTCCCCTCAGCTTTCCAGCAATGCTCTGGTGCAAGTGCGGGTGCTGGACCAGAATGATCATTCTCCGATCCTTGTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS TCA 72 bp | GAACTTCTCAGCTTCTCGGCCCGAGATGGTGTTGAATaGATGACCCTTCCAGACTGCAACAGGGGGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ELLSFSARDGVE*MTLPDCNRGRS Trigger: GCTGCGCCCCCTGTTGCAGTCTGGAAGGGTCATTCATTCAACACCATCTCGGGCCGAGAAGCTGAGAAGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS GCA 72 bp | ATGGGCTCCAGCAGCGATCAGAATGACCTAGGATCTTaGACTCAGCAGTACACGCCCACAGTCCACTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: MGSSSDQNDLGS*TQQYTPTVHSA Trigger: TGCAGAGTGGACTGTGGGCGTGTACTGCTGAGTGCAAGATCCTAGGTCATTCTGATCGCTGCTGGAGCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CAA 72 bp | GATCGGAGAATGATCATTCTGGTCCAGCACCCGCACTaGCACCAGAGCATTGCTGGAAAGCTGAGGGGAACC | + |
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Preference number: 6 (lower is better) Translates to: DRRMIILVQHPH*HQSIAGKLRGT Trigger: GGTTCCCCTCAGCTTTCCAGCAATGCTCTGGTGCAAGTGCGGGTGCTGGACCAGAATGATCATTCTCCGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS TCA 72 bp | ACACTTTCATGTGCAGGTCTTCTGCAAGGGTTCCGATaGCTGTGCCAGGGGCATCCTCTTCGAACGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: TLSCAGLLQGFR*LCQGHPLRTCC Trigger: ACAGCACGTTCGAAGAGGATGCCCCTGGCACAGTCATCGGAACCCTTGCAGAAGACCTGCACATGAAAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS GCA 72 bp | ATCAGGCGGAAGCTTGTGTCTCCAGACACTTTCATGTaGAGGTCTTCTGCAAGGGTTCCGATGACTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: IRRKLVSPDTFM*RSSARVPMTVP Trigger: TGGCACAGTCATCGGAACCCTTGCAGAAGACCTGCACATGAAAGTGTCTGGAGACACAAGCTTCCGCCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CCA 72 bp | GTACTTTCTCATAGACGCTCTGCAACCCTACTGTCTTaGGGAGCTGGGCCTGATAGTAATTGTCCCTGCGCA | + |
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Preference number: 6 (lower is better) Translates to: VLSHRRSATLLS*GAGPDSNCPCA Trigger: TGCGCAGGGACAATTACTATCAGGCCCAGCTCCCCAAGACAGTAGGGTTGCAGAGCGTCTATGAGAAAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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| CDS CAA 72 bp | GCCAGAGGAGTGATAGAAATTTCAGGAGCGTTGTCGTaGACGTCTCGGATGCGCACGATAACCTTGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: ARGVIEISGALS*TSRMRTITLQV Trigger: CACCTGCAAGGTTATCGTGCGCATCCGAGACGTCAACGACAACGCTCCTGAAATTTCTATCACTCCTCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039568.11 ENSMUST00000195355.2 |
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