Pregenerated sensors for PCDH20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050505Ensembl transcript IDs: ENSMUST00000061628.7, ENSMUST00000192557.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTTCTCATGCAAGAAATGAAGTTCAATAACCAAACCGCCCCCAAACACATGAACAATGCCACAGATCCCTaGAAAGGGGAAGCTGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: FLMQEMKFNNQTAPKHMNNATDP*KGEAGA Trigger: GGCACCAGCTTCCCCTTTGCAGGGATCTGTGGCATT...GTTCATGTGTTTGGGGGCGGTTTGGTTATTGAACTTCATTTCTTGCATGAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| 3UTR-3UTR GCA 90 bp | GAGGCGTTACACGAAACATCGCACTCTTCAGCAGGTCAAGTTTATAACACATGGAACTATCATGTACAATaGCACAGATCCCTGCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: EALHETSHSSAGQVYNTWNYHVQ*HRSLQR Trigger: CCTTTGCAGGGATCTGTGGCATTGTACATGATAGTT...CCATGTGTTATAAACTTGACCTGCTGAAGAGTGCGATGTTTCGTGTAACGCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| 3UTR-3UTR GCA 90 bp | GAGGCGTTACACGAAACATCGCACTCTTCAGCAGGTCAAGTTTATAACACATGGCAGCACAATGTTGTCTaGTTGACAAAGACTACCTAT | + |
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Preference number: 2 (lower is better) Translates to: EALHETSHSSAGQVYNTWQHNVV*LTKTTY Trigger: ATAGGTAGTCTTTGTCAAGCAGACAACATTGTGCTG...CCATGTGTTATAAACTTGACCTGCTGAAGAGTGCGATGTTTCGTGTAACGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| 3UTR-3UTR TCA 90 bp | ATCCCCATCTCATGCAAAGAAGGAAGCGATAGAAATCACCGACAAACCAGGTTTCGTACAGTAGCCTTTTaGAGAATTCAATCTGAATAC | + |
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Preference number: 2 (lower is better) Translates to: IPISCKEGSDRNHRQTRFRTVAF*RIQSEY Trigger: GTATTCAGATTGAATTCTTCAAAAGGCTACTGTACG...AAACCTGGTTTGTCGGTGATTTCTATCGCTTCCTTCTTTGCATGAGATGGGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| 3UTR-3UTR GCA 90 bp | ATCCCCATCTCATGCAAAGAAGGAAGCGATAGAAATCACCGACAAACCAGGTTTAGTACAATGTCTAGATaGTTTTCACGAACGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: IPISCKEGSDRNHRQTRFSTMSR*FSRTEE Trigger: TTCTTCCGTTCGTGAAAAGCATCTAGACATTGTACT...AAACCTGGTTTGTCGGTGATTTCTATCGCTTCCTTCTTTGCATGAGATGGGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| 3UTR-3UTR CCA 90 bp | AGGGTGATAAGTAAAGCGACTCACTTTGAAGCTAACACATTTCTTGTTTACACAGACAAAGACTACCTATaGCAGTTACAATGTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: RVISKATHFEANTFLVYTDKDYL*QLQCPS Trigger: GGAGGGACATTGTAACTGCCATAGGTAGTCTTTGTC...TGTGTAAACAAGAAATGTGTTAGCTTCAAAGTGAGTCGCTTTACTTATCACCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| 3UTR-3UTR TCA 90 bp | AGGGTGATAAGTAAAGCGACTCACTTTGAAGCTAACACATTTCTTGTTTACACAGGTGCCCTCTTGTGGTaGAAAGACATTTTAGAAACA | + |
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Preference number: 2 (lower is better) Translates to: RVISKATHFEANTFLVYTGALLW*KDILET Trigger: TGTTTCTAAAATGTCTTTTCACCACAAGAGGGCACC...TGTGTAAACAAGAAATGTGTTAGCTTCAAAGTGAGTCGCTTTACTTATCACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| 3UTR GCA 72 bp | TGTCCTTTAGTGGAACTGTGTCAGCACAATGTTGTCTaGTTGACAAAGACTACCTATGGCAGTTACAATGTC | + |
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Preference number: 3 (lower is better) Translates to: CPLVELCQHNVV*LTKTTYGSYNV Trigger: GACATTGTAACTGCCATAGGTAGTCTTTGTCAAGCAGACAACATTGTGCTGACACAGTTCCACTAAAGGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| 3UTR CCA 72 bp | TCAGCACAATGTTGTCTGCTTGACAAAGACTACCTATaGCAGTTACAATGTCCCTCCATGTTATTCCACAAT | + |
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Preference number: 3 (lower is better) Translates to: SAQCCLLDKDYL*QLQCPSMLFHN Trigger: ATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTGTCAAGCAGACAACATTGTGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| 3UTR GCA 72 bp | GTGTGTCTTGATCTTTTACTGAGTACAATGTCTAGATaGTTTTCACGAACGGAAGAATACACAGATGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: VCLDLLLSTMSR*FSRTEEYTDGS Trigger: GGAACCATCTGTGTATTCTTCCGTTCGTGAAAAGCATCTAGACATTGTACTCAGTAAAAGATCAAGACACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| 3UTR TCA 72 bp | AATGCCTTCTCTTTCAAACTAAAATCGGTGTACCTATaGGGTAATACATTTTCTGTTTGCAAGTGGATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: NAFSFKLKSVYL*GNTFSVCKWIS Trigger: AGAAATCCACTTGCAAACAGAAAATGTATTACCTCATAGGTACACCGATTTTAGTTTGAAAGAGAAGGCATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATCCGCCAGGCTGCCTATaGGCACTCCGGCGGGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHPPGCL*ALRRAV Trigger: GACTGCCCGCCGGAGTGCTCATAGGCAGCCTGGCGG...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR GCA 90 bp | GAGGCGTTACACGAAACATCGCACTCTTCAGCAGGTCAAGTTTATAACACATGGATATCCAGGCACGGGTaGCAGGTCGCCGGGCGCAAG | + |
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Preference number: 4 (lower is better) Translates to: EALHETSHSSAGQVYNTWISRHG*QVAGRK Trigger: CTTGCGCCCGGCGACCTGGCACCCGTGCCTGGATAT...CCATGTGTTATAAACTTGACCTGCTGAAGAGTGCGATGTTTCGTGTAACGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR GCA 90 bp | GAGGCGTTACACGAAACATCGCACTCTTCAGCAGGTCAAGTTTATAACACATGGAGGCAATGGAGGTACTaGCGGCCCAGGCAGCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: EALHETSHSSAGQVYNTWRQWRY*RPRQPH Trigger: GTGGGGCTGCCTGGGCCGGCAGTACCTCCATTGCCT...CCATGTGTTATAAACTTGACCTGCTGAAGAGTGCGATGTTTCGTGTAACGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR TCA 90 bp | GAGGCGTTACACGAAACATCGCACTCTTCAGCAGGTCAAGTTTATAACACATGGGGCCACTGTAGCCACTaGTTCTCTGGGTGGCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: EALHETSHSSAGQVYNTWGHCSH*FSGWRP Trigger: GGGACGCCACCCAGAGAATCAGTGGCTACAGTGGCC...CCATGTGTTATAAACTTGACCTGCTGAAGAGTGCGATGTTTCGTGTAACGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR GCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATCGGGCGCAAGCTCACTaGCTGGACCAGCAAGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHRAQAH*LDQQAA Trigger: CGCAGCTTGCTGGTCCAGGCAGTGAGCTTGCGCCCG...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR GCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATATATCCAGGCACGGGTaGCAGGTCGCCGGGCGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHISRHG*QVAGRK Trigger: CTTGCGCCCGGCGACCTGGCACCCGTGCCTGGATAT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR GCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATAGGCAATGGAGGTACTaGCGGCCCAGGCAGCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHRQWRY*RPRQPH Trigger: GTGGGGCTGCCTGGGCCGGCAGTACCTCCATTGCCT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR CCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATCGCAAGCTCACTGCCTaGACCAGCAAGCTGCGCGCG | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHRKLTA*TSKLRA Trigger: CGCGCGCAGCTTGCTGGTCCAGGCAGTGAGCTTGCG...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR CCA 90 bp | GAGGCGTTACACGAAACATCGCACTCTTCAGCAGGTCAAGTTTATAACACATGGACTGCCCAGCAGTGGTaGAGACCCACCATCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: EALHETSHSSAGQVYNTWTAQQW*RPTILS Trigger: GCTGAGGATGGTGGGTCTCCACCACTGCTGGGCAGT...CCATGTGTTATAAACTTGACCTGCTGAAGAGTGCGATGTTTCGTGTAACGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR TCA 90 bp | AGGGTGATAAGTAAAGCGACTCACTTTGAAGCTAACACATTTCTTGTTTACACACCGCCAGGCTGCCTATaGGCACTCCGGCGGGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: RVISKATHFEANTFLVYTPPGCL*ALRRAV Trigger: GACTGCCCGCCGGAGTGCTCATAGGCAGCCTGGCGG...TGTGTAAACAAGAAATGTGTTAGCTTCAAAGTGAGTCGCTTTACTTATCACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGGCCACTGTAGCCACTaGTTCTCTGGGTGGCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHGHCSH*FSGWRP Trigger: GGGACGCCACCCAGAGAATCAGTGGCTACAGTGGCC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR GCA 90 bp | GAGGCGTTACACGAAACATCGCACTCTTCAGCAGGTCAAGTTTATAACACATGGCTGGGACGATGTAGATaGCCCATATCCAGGCACGGG | + |
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Preference number: 4 (lower is better) Translates to: EALHETSHSSAGQVYNTWLGRCR*PISRHG Trigger: CCCGTGCCTGGATATGGGGCATCTACATCGTCCCAG...CCATGTGTTATAAACTTGACCTGCTGAAGAGTGCGATGTTTCGTGTAACGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR CCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATTGCGGCAGGTTCCTGTaGCTGGTCCTGCTGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHCGRFL*LVLLLG Trigger: TCCCAGCAGCAGGACCAGCCACAGGAACCTGCCGCA...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR CCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGGCACTGCCCAGCAGTaGTGGAGACCCACCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHGTAQQ*WRPTIL Trigger: GAGGATGGTGGGTCTCCACCACTGCTGGGCAGTGCC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR TCA 90 bp | GAGGCGTTACACGAAACATCGCACTCTTCAGCAGGTCAAGTTTATAACACATGGAACTCGCGAGGCAATTaGAGGGTCCCACGAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: EALHETSHSSAGQVYNTWNSRGN*RVPRRG Trigger: TCCTCTTCGTGGGACCCTTCAATTGCCTCGCGAGTT...CCATGTGTTATAAACTTGACCTGCTGAAGAGTGCGATGTTTCGTGTAACGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR TCA 90 bp | ATCCCCATCTCATGCAAAGAAGGAAGCGATAGAAATCACCGACAAACCAGGTTTCACTTATGCCAATGGTaGGGGTGGCACTGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: IPISCKEGSDRNHRQTRFHLCQW*GWHCPA Trigger: TGCTGGGCAGTGCCACCCTCACCATTGGCATAAGTG...AAACCTGGTTTGTCGGTGATTTCTATCGCTTCCTTCTTTGCATGAGATGGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR CCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGGCTGGTCCTGCTGCTaGGACGATGTAGATGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHGWSCC*DDVDAP Trigger: TGGGGCATCTACATCGTCCCAGCAGCAGGACCAGCC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCATGCAAGAAATGAAGTTCAATAACCAAACCGCCCCCAAACACATGAACTGCGGCAGGTTCCTGTaGCTGGTCCTGCTGCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: FLMQEMKFNNQTAPKHMNCGRFL*LVLLLG Trigger: TCCCAGCAGCAGGACCAGCCACAGGAACCTGCCGCA...GTTCATGTGTTTGGGGGCGGTTTGGTTATTGAACTTCATTTCTTGCATGAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR CCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATACTGCCCAGCAGTGGTaGAGACCCACCATCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHTAQQW*RPTILS Trigger: GCTGAGGATGGTGGGTCTCCACCACTGCTGGGCAGT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR CCA 90 bp | GAGGCGTTACACGAAACATCGCACTCTTCAGCAGGTCAAGTTTATAACACATGGACCATGACTGTGGAGTaGAGAGGCTCAGGGTATCCG | + |
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Preference number: 4 (lower is better) Translates to: EALHETSHSSAGQVYNTWTMTVE*RGSGYP Trigger: CGGATACCCTGAGCCTCTCCACTCCACAGTCATGGT...CCATGTGTTATAAACTTGACCTGCTGAAGAGTGCGATGTTTCGTGTAACGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR TCA 90 bp | GAGGCGTTACACGAAACATCGCACTCTTCAGCAGGTCAAGTTTATAACACATGGAACCGAAAATATTCCTaGGGCAGGACCAGCACGTCC | + |
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Preference number: 4 (lower is better) Translates to: EALHETSHSSAGQVYNTWNRKYS*GRTSTS Trigger: GGACGTGCTGGTCCTGCCTCAGGAATATTTTCGGTT...CCATGTGTTATAAACTTGACCTGCTGAAGAGTGCGATGTTTCGTGTAACGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATCACTTATGCCAATGGTaGGGGTGGCACTGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHHLCQW*GWHCPA Trigger: TGCTGGGCAGTGCCACCCTCACCATTGGCATAAGTG...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATTGTAGGGTGCCAGCCTaGATGGCCCTTCACCATCCA | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHCRVPA*MALHHP Trigger: TGGATGGTGAAGGGCCATTCAGGCTGGCACCCTACA...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR GCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATCTGGGACGATGTAGATaGCCCATATCCAGGCACGGG | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHLGRCR*PISRHG Trigger: CCCGTGCCTGGATATGGGGCATCTACATCGTCCCAG...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR GCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATTGTGGCTGGTCCTGCTaGTGGGACGATGTAGATGCC | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHCGWSC*WDDVDA Trigger: GGCATCTACATCGTCCCAGCAGCAGGACCAGCCACA...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR GCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATTCCCCTCAGAGGCAGTaGGCTCTGGATGCAGCAACT | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHSPQRQ*ALDAAT Trigger: AGTTGCTGCATCCAGAGCGCACTGCCTCTGAGGGGA...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR CCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGGATGCAGCAACTGCTaGTTCTGTCTCCCAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHGCSNC*FCLPEA Trigger: GGCCTCTGGGAGACAGAACCAGCAGTTGCTGCATCC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATAACTCGCGAGGCAATTaGAGGGTCCCACGAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHNSRGN*RVPRRG Trigger: TCCTCTTCGTGGGACCCTTCAATTGCCTCGCGAGTT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR TCA 90 bp | ATCCCCATCTCATGCAAAGAAGGAAGCGATAGAAATCACCGACAAACCAGGTTTGCCCAAGCTTATGACTaGCAGAGCTACCAATGTGGG | + |
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Preference number: 4 (lower is better) Translates to: IPISCKEGSDRNHRQTRFAQAYD*QSYQCG Trigger: CCCACATTGGTAGCTCTGTCAGTCATAAGCTTGGGC...AAACCTGGTTTGTCGGTGATTTCTATCGCTTCCTTCTTTGCATGAGATGGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR GCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATTCCTGTGGCTGGTCCTaGTGCTGGGACGATGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHSCGWS*CWDDVD Trigger: ATCTACATCGTCCCAGCAGCAGGACCAGCCACAGGA...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR GCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGCAGTGCGCTCTGGATaGAGCAACTGCTGGTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHAVRSG*SNCWFC Trigger: ACAGAACCAGCAGTTGCTGCATCCAGAGCGCACTGC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR GCA 90 bp | TTTCTCATGCAAGAAATGAAGTTCAATAACCAAACCGCCCCCAAACACATGAACTCCCCTCAGAGGCAGTaGGCTCTGGATGCAGCAACT | + |
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Preference number: 4 (lower is better) Translates to: FLMQEMKFNNQTAPKHMNSPQRQ*ALDAAT Trigger: AGTTGCTGCATCCAGAGCGCACTGCCTCTGAGGGGA...GTTCATGTGTTTGGGGGCGGTTTGGTTATTGAACTTCATTTCTTGCATGAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR GCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATTCTGTCGATCTCCTGTaGAGAAGTGTGCAGCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHSVDLL*RSVQLA Trigger: GGCGAGCTGCACACTTCTGCACAGGAGATCGACAGA...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR CCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATTTTAGGGTCACATACTaGCCACTCAGTCCCCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHFRVTY*PLSPPE Trigger: CTCCGGGGGACTGAGTGGCCAGTATGTGACCCTAAA...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCCATCTCATGCAAAGAAGGAAGCGATAGAAATCACCGACAAACCAGGTTTTCTCTATCCACAGCCTaGACTGTTGCAACTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPISCKEGSDRNHRQTRFSLSTA*TVATGV Trigger: CACCCCAGTTGCAACAGTCCAGGCTGTGGATAGAGA...AAACCTGGTTTGTCGGTGATTTCTATCGCTTCCTTCTTTGCATGAGATGGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR CCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATACCATGACTGTGGAGTaGAGAGGCTCAGGGTATCCG | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHTMTVE*RGSGYP Trigger: CGGATACCCTGAGCCTCTCCACTCCACAGTCATGGT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGACATGAAATCCCTCTaGGTTCCAGGCCACTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHDMKSL*VPGHYS Trigger: GCTGTAGTGGCCTGGAACTCAGAGGGATTTCATGTC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGACTTCTGTTACTGGTaGGCCAGGGAGAGTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHDFCYW*ARESRR Trigger: CCTTCTACTCTCCCTGGCTCACCAGTAACAGAAGTC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATTCTTGGGGTCAATTCTaGAAGACTCAGGCCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHSWGQF*KTQAWD Trigger: GTCCCAGGCCTGAGTCTTTCAGAATTGACCCCAAGA...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGGCTCAGGGTATCCGTaGTCACTCACTTTCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHGSGYP*SLTFTS Trigger: ACTGGTGAAAGTGAGTGATCACGGATACCCTGAGCC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCGTTACACGAAACATCGCACTCTTCAGCAGGTCAAGTTTATAACACATGGCAAATAAGTTCACCATaGCTGTGGAGTGGAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EALHETSHSSAGQVYNTWQISSP*LWSGEA Trigger: AGCCTCTCCACTCCACAGTCATGGTGAACTTATTTG...CCATGTGTTATAAACTTGACCTGCTGAAGAGTGCGATGTTTCGTGTAACGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGCCCAAGCTTATGACTaGCAGAGCTACCAATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHAQAYD*QSYQCG Trigger: CCCACATTGGTAGCTCTGTCAGTCATAAGCTTGGGC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | ATCCCCATCTCATGCAAAGAAGGAAGCGATAGAAATCACCGACAAACCAGGTTTTGGAGCCCAAGCTTATaGCTGACAGAGCTACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: IPISCKEGSDRNHRQTRFWSPSL*LTELPM Trigger: CATTGGTAGCTCTGTCAGTCATAAGCTTGGGCTCCA...AAACCTGGTTTGTCGGTGATTTCTATCGCTTCCTTCTTTGCATGAGATGGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR GCA 90 bp | GAGGCGTTACACGAAACATCGCACTCTTCAGCAGGTCAAGTTTATAACACATGGAAAAGCAGAAAAACATaGGGCAGGTTCCTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EALHETSHSSAGQVYNTWKSRKT*GRFLWL Trigger: CAGCCACAGGAACCTGCCGCATGTTTTTCTGCTTTT...CCATGTGTTATAAACTTGACCTGCTGAAGAGTGCGATGTTTCGTGTAACGCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR GCA 90 bp | TTTCTCATGCAAGAAATGAAGTTCAATAACCAAACCGCCCCCAAACACATGAACGCAGTGCGCTCTGGATaGAGCAACTGCTGGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLMQEMKFNNQTAPKHMNAVRSG*SNCWFC Trigger: ACAGAACCAGCAGTTGCTGCATCCAGAGCGCACTGC...GTTCATGTGTTTGGGGGCGGTTTGGTTATTGAACTTCATTTCTTGCATGAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR GCA 90 bp | ATCCCCATCTCATGCAAAGAAGGAAGCGATAGAAATCACCGACAAACCAGGTTTCAATCAAGTAGGGTGTaGGCTCCCCGTTCTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPISCKEGSDRNHRQTRFQSSRV*APRSHS Trigger: AGAATGAGAACGGGGAGCGCACACCCTACTTGATTG...AAACCTGGTTTGTCGGTGATTTCTATCGCTTCCTTCTTTGCATGAGATGGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR GCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATAAGAGCAGTGATCACTaGAGGGATACAGCCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHKSSDH*RDTARS Trigger: GGACCTGGCTGTATCCCTGCAGTGATCACTGCTCTT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTGATAAGTAAAGCGACTCACTTTGAAGCTAACACATTTCTTGTTTACACAGGCTGGTCCTGCTGCTaGGACGATGTAGATGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVISKATHFEANTFLVYTGWSCC*DDVDAP Trigger: TGGGGCATCTACATCGTCCCAGCAGCAGGACCAGCC...TGTGTAAACAAGAAATGTGTTAGCTTCAAAGTGAGTCGCTTTACTTATCACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR CCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATTCTCTATCCACAGCCTaGACTGTTGCAACTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHSLSTA*TVATGV Trigger: CACCCCAGTTGCAACAGTCCAGGCTGTGGATAGAGA...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATTGTCCAAAGCACCCATaGCAATCAAGTAGGGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHCPKHP*QSSRVC Trigger: GCACACCCTACTTGATTGTCATGGGTGCTTTGGACA...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATTCGATACAAGAGCAGTaGTCACTGCAGGGATACAGC | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHSIQEQ*SLQGYS Trigger: GCTGTATCCCTGCAGTGATCACTGCTCTTGTATCGA...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTCATGCAAGAAATGAAGTTCAATAACCAAACCGCCCCCAAACACATGAACGACATGAAATCCCTCTaGGTTCCAGGCCACTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLMQEMKFNNQTAPKHMNDMKSL*VPGHYS Trigger: GCTGTAGTGGCCTGGAACTCAGAGGGATTTCATGTC...GTTCATGTGTTTGGGGGCGGTTTGGTTATTGAACTTCATTTCTTGCATGAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATTGGAGCCCAAGCTTATaGCTGACAGAGCTACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHWSPSL*LTELPM Trigger: CATTGGTAGCTCTGTCAGTCATAAGCTTGGGCTCCA...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATCAATCAAGTAGGGTGTaGGCTCCCCGTTCTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHQSSRV*APRSHS Trigger: AGAATGAGAACGGGGAGCGCACACCCTACTTGATTG...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTGATAAGTAAAGCGACTCACTTTGAAGCTAACACATTTCTTGTTTACACAGGATGCAGCAACTGCTaGTTCTGTCTCCCAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVISKATHFEANTFLVYTGCSNC*FCLPEA Trigger: GGCCTCTGGGAGACAGAACCAGCAGTTGCTGCATCC...TGTGTAAACAAGAAATGTGTTAGCTTCAAAGTGAGTCGCTTTACTTATCACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR TCA 90 bp | ATCCCCATCTCATGCAAAGAAGGAAGCGATAGAAATCACCGACAAACCAGGTTTTCGGGTATTTACAGGTaGATTTTCTGGGACCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IPISCKEGSDRNHRQTRFSGIYR*IFWDPN Trigger: GTTTGGGTCCCAGAAAATTCACCTGTAAATACCCGA...AAACCTGGTTTGTCGGTGATTTCTATCGCTTCCTTCTTTGCATGAGATGGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR TCA 90 bp | TTTCTCATGCAAGAAATGAAGTTCAATAACCAAACCGCCCCCAAACACATGAACTGTCCAAAGCACCCATaGCAATCAAGTAGGGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLMQEMKFNNQTAPKHMNCPKHP*QSSRVC Trigger: GCACACCCTACTTGATTGTCATGGGTGCTTTGGACA...GTTCATGTGTTTGGGGGCGGTTTGGTTATTGAACTTCATTTCTTGCATGAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGGCTGTAACTGTAAGTaGTCTGTGCATTTGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHGCNCK*SVHLSP Trigger: TGGGGACAAATGCACAGATCACTTACAGTTACAGCC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | ATCCCCATCTCATGCAAAGAAGGAAGCGATAGAAATCACCGACAAACCAGGTTTAATTCTATCAAGGGCTaGAGGAAAACAGGGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: IPISCKEGSDRNHRQTRFNSIKG*RKTGAL Trigger: CAATGCCCCTGTTTTCCTTCAGCCCTTGATAGAATT...AAACCTGGTTTGTCGGTGATTTCTATCGCTTCCTTCTTTGCATGAGATGGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATCAAATAAGTTCACCATaGCTGTGGAGTGGAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHQISSP*LWSGEA Trigger: AGCCTCTCCACTCCACAGTCATGGTGAACTTATTTG...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCGTTACACGAAACATCGCACTCTTCAGCAGGTCAAGTTTATAACACATGGTTGTCATCTTCCCTGTaGTGCTTTTTACCTTTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: EALHETSHSSAGQVYNTWLSSSL*CFLPFR Trigger: ACGGAAAGGTAAAAAGCATCACAGGGAAGATGACAA...CCATGTGTTATAAACTTGACCTGCTGAAGAGTGCGATGTTTCGTGTAACGCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR GCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATAAAAGCAGAAAAACATaGGGCAGGTTCCTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHKSRKT*GRFLWL Trigger: CAGCCACAGGAACCTGCCGCATGTTTTTCTGCTTTT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTGATAAGTAAAGCGACTCACTTTGAAGCTAACACATTTCTTGTTTACACATCTGTCGATCTCCTGTaGAGAAGTGTGCAGCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVISKATHFEANTFLVYTSVDLL*RSVQLA Trigger: GGCGAGCTGCACACTTCTGCACAGGAGATCGACAGA...TGTGTAAACAAGAAATGTGTTAGCTTCAAAGTGAGTCGCTTTACTTATCACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR CCA 90 bp | AGGGTGATAAGTAAAGCGACTCACTTTGAAGCTAACACATTTCTTGTTTACACATTTAGGGTCACATACTaGCCACTCAGTCCCCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVISKATHFEANTFLVYTFRVTY*PLSPPE Trigger: CTCCGGGGGACTGAGTGGCCAGTATGTGACCCTAAA...TGTGTAAACAAGAAATGTGTTAGCTTCAAAGTGAGTCGCTTTACTTATCACCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR CCA 90 bp | ATCCCCATCTCATGCAAAGAAGGAAGCGATAGAAATCACCGACAAACCAGGTTTCAGAGATTTCAGAAATaGGGAACTGCGGAGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: IPISCKEGSDRNHRQTRFQRFQK*GTAEHC Trigger: ACAATGCTCCGCAGTTCCCCATTTCTGAAATCTCTG...AAACCTGGTTTGTCGGTGATTTCTATCGCTTCCTTCTTTGCATGAGATGGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR CCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATCTCACATACTGGTCCTaGGTTTCTCTGTCCAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHLTYWS*VSLSKA Trigger: TGCTTTGGACAGAGAAACCCAGGACCAGTATGTGAG...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATATGATGCTCACATACTaGTCCTGGGTTTCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHMMLTY*SWVSLS Trigger: GGACAGAGAAACCCAGGACCAGTATGTGAGCATCAT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATACGTGGGACGATTTCTaGGGGTCTGAAAACGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHTWDDF*GSENDF Trigger: AAAGTCGTTTTCAGACCCCCAGAAATCGTCCCACGT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATTCGGGTATTTACAGGTaGATTTTCTGGGACCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHSGIYR*IFWDPN Trigger: GTTTGGGTCCCAGAAAATTCACCTGTAAATACCCGA...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTCATGCAAGAAATGAAGTTCAATAACCAAACCGCCCCCAAACACATGAACGGCTGTAACTGTAAGTaGTCTGTGCATTTGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLMQEMKFNNQTAPKHMNGCNCK*SVHLSP Trigger: TGGGGACAAATGCACAGATCACTTACAGTTACAGCC...GTTCATGTGTTTGGGGGCGGTTTGGTTATTGAACTTCATTTCTTGCATGAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATAATTCTATCAAGGGCTaGAGGAAAACAGGGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHNSIKG*RKTGAL Trigger: CAATGCCCCTGTTTTCCTTCAGCCCTTGATAGAATT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGAGGAGGGTTATCGTTaGTGTCCAGAAGAAGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHEEGYR*CPEEEL Trigger: CAATTCTTCTTCTGGACATCAACGATAACCCTCCTC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTGATAAGTAAAGCGACTCACTTTGAAGCTAACACATTTCTTGTTTACACATCTTGGGGTCAATTCTaGAAGACTCAGGCCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RVISKATHFEANTFLVYTSWGQF*KTQAWD Trigger: GTCCCAGGCCTGAGTCTTTCAGAATTGACCCCAAGA...TGTGTAAACAAGAAATGTGTTAGCTTCAAAGTGAGTCGCTTTACTTATCACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR TCA 90 bp | AGGGTGATAAGTAAAGCGACTCACTTTGAAGCTAACACATTTCTTGTTTACACAGGCTCAGGGTATCCGTaGTCACTCACTTTCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVISKATHFEANTFLVYTGSGYP*SLTFTS Trigger: ACTGGTGAAAGTGAGTGATCACGGATACCCTGAGCC...TGTGTAAACAAGAAATGTGTTAGCTTCAAAGTGAGTCGCTTTACTTATCACCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR GCA 90 bp | ATCCCCATCTCATGCAAAGAAGGAAGCGATAGAAATCACCGACAAACCAGGTTTACTGTAAGTGATCTGTaGATTTGTCCCCAAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPISCKEGSDRNHRQTRFTVSDL*ICPQVS Trigger: AGAGACTTGGGGACAAATGCACAGATCACTTACAGT...AAACCTGGTTTGTCGGTGATTTCTATCGCTTCCTTCTTTGCATGAGATGGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR GCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATACCATCCACCTCATTTaGGATATAACGTGGGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHTIHLI*DITWDD Trigger: ATCGTCCCACGTTATATCGCAAATGAGGTGGATGGT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATCAGAGATTTCAGAAATaGGGAACTGCGGAGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHQRFQK*GTAEHC Trigger: ACAATGCTCCGCAGTTCCCCATTTCTGAAATCTCTG...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTCATGCAAGAAATGAAGTTCAATAACCAAACCGCCCCCAAACACATGAACCTCACATACTGGTCCTaGGTTTCTCTGTCCAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLMQEMKFNNQTAPKHMNLTYWS*VSLSKA Trigger: TGCTTTGGACAGAGAAACCCAGGACCAGTATGTGAG...GTTCATGTGTTTGGGGGCGGTTTGGTTATTGAACTTCATTTCTTGCATGAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR CCA 90 bp | TTTCTCATGCAAGAAATGAAGTTCAATAACCAAACCGCCCCCAAACACATGAACATGATGCTCACATACTaGTCCTGGGTTTCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLMQEMKFNNQTAPKHMNMMLTY*SWVSLS Trigger: GGACAGAGAAACCCAGGACCAGTATGTGAGCATCAT...GTTCATGTGTTTGGGGGCGGTTTGGTTATTGAACTTCATTTCTTGCATGAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR CCA 90 bp | GAGGCGTTACACGAAACATCGCACTCTTCAGCAGGTCAAGTTTATAACACATGGGTAACTTCATCCAGGTaGAATAAATCCTTGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EALHETSHSSAGQVYNTWVTSSR*NKSLVS Trigger: GGAAACCAAGGATTTATTCCACCTGGATGAAGTTAC...CCATGTGTTATAAACTTGACCTGCTGAAGAGTGCGATGTTTCGTGTAACGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATTTGTCATCTTCCCTGTaGTGCTTTTTACCTTTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHLSSSL*CFLPFR Trigger: ACGGAAAGGTAAAAAGCATCACAGGGAAGATGACAA...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATACTGTAAGTGATCTGTaGATTTGTCCCCAAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHTVSDL*ICPQVS Trigger: AGAGACTTGGGGACAAATGCACAGATCACTTACAGT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTCATGCAAGAAATGAAGTTCAATAACCAAACCGCCCCCAAACACATGAACACCATCCACCTCATTTaGGATATAACGTGGGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLMQEMKFNNQTAPKHMNTIHLI*DITWDD Trigger: ATCGTCCCACGTTATATCGCAAATGAGGTGGATGGT...GTTCATGTGTTTGGGGGCGGTTTGGTTATTGAACTTCATTTCTTGCATGAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR GCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATCAGAAAGGCATTGGGTaGGTTGTTTTCTTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHQKGIG*VVFFNG Trigger: ACCATTGAAGAAAACAACGCACCCAATGCCTTTCTG...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATATCCTTGGTTTCCTGTaGAACTTTCTGGCTGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHILGFL*NFLAVT Trigger: AGTTACAGCCAGAAAGTTCCACAGGAAACCAAGGAT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATATGAGTTGGCTCTATTaGGATTTGTGGTTCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHMSWLY*DLWFFL Trigger: GAGAAAGAACCACAAATCTCAATAGAGCCAACTCAT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGATTCTACCTTCCTATaGGTTGGCTCTATTGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHDSTFL*VGSIEI Trigger: AATCTCAATAGAGCCAACTCATAGGAAGGTAGAATC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR CCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGTAACTTCATCCAGGTaGAATAAATCCTTGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHVTSSR*NKSLVS Trigger: GGAAACCAAGGATTTATTCCACCTGGATGAAGTTAC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGGTGACATTAATTTGTaGGTCTATAAAGAGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHGDINL*VYKERT Trigger: TGTCCTCTCTTTATAGACTCACAAATTAATGTCACC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR TCA 90 bp | AGGGTGATAAGTAAAGCGACTCACTTTGAAGCTAACACATTTCTTGTTTACACAGAGGAGGGTTATCGTTaGTGTCCAGAAGAAGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: RVISKATHFEANTFLVYTEEGYR*CPEEEL Trigger: CAATTCTTCTTCTGGACATCAACGATAACCCTCCTC...TGTGTAAACAAGAAATGTGTTAGCTTCAAAGTGAGTCGCTTTACTTATCACCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR TCA 90 bp | TTTCTCATGCAAGAAATGAAGTTCAATAACCAAACCGCCCCCAAACACATGAACGATTCTACCTTCCTATaGGTTGGCTCTATTGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: FLMQEMKFNNQTAPKHMNDSTFL*VGSIEI Trigger: AATCTCAATAGAGCCAACTCATAGGAAGGTAGAATC...GTTCATGTGTTTGGGGGCGGTTTGGTTATTGAACTTCATTTCTTGCATGAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR GCA 90 bp | AGGGTGATAAGTAAAGCGACTCACTTTGAAGCTAACACATTTCTTGTTTACACACAGAAAGGCATTGGGTaGGTTGTTTTCTTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVISKATHFEANTFLVYTQKGIG*VVFFNG Trigger: ACCATTGAAGAAAACAACGCACCCAATGCCTTTCTG...TGTGTAAACAAGAAATGTGTTAGCTTCAAAGTGAGTCGCTTTACTTATCACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR CCA 90 bp | AGGGTGATAAGTAAAGCGACTCACTTTGAAGCTAACACATTTCTTGTTTACACAATCCTTGGTTTCCTGTaGAACTTTCTGGCTGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: RVISKATHFEANTFLVYTILGFL*NFLAVT Trigger: AGTTACAGCCAGAAAGTTCCACAGGAAACCAAGGAT...TGTGTAAACAAGAAATGTGTTAGCTTCAAAGTGAGTCGCTTTACTTATCACCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR CCA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGTTAGAAATATCCACTaGTTTTCTCTCTCTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHVRNIH*FSLSHT Trigger: TGTATGAGAGAGAGAAAACCAGTGGATATTTCTAAC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTGATAAGTAAAGCGACTCACTTTGAAGCTAACACATTTCTTGTTTACACAATGAGTTGGCTCTATTaGGATTTGTGGTTCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RVISKATHFEANTFLVYTMSWLY*DLWFFL Trigger: GAGAAAGAACCACAAATCTCAATAGAGCCAACTCAT...TGTGTAAACAAGAAATGTGTTAGCTTCAAAGTGAGTCGCTTTACTTATCACCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR CCA 90 bp | TTTCTCATGCAAGAAATGAAGTTCAATAACCAAACCGCCCCCAAACACATGAACGTTAGAAATATCCACTaGTTTTCTCTCTCTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: FLMQEMKFNNQTAPKHMNVRNIH*FSLSHT Trigger: TGTATGAGAGAGAGAAAACCAGTGGATATTTCTAAC...GTTCATGTGTTTGGGGGCGGTTTGGTTATTGAACTTCATTTCTTGCATGAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS GCA 90 bp | GTCCTGCTGCTGGGACGATGTAGATGCCCCATATCCAGGCACGGGTaGCAGGTCGCCGGGCGCAAGCTCACTGCCTGGACCAGCAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLLLGRCRCPISRHG*QVAGRKLTAWTSKL Trigger: CAGCTTGCTGGTCCAGGCAGTGAGCTTGCGCCCGGCGACCTGGCACCCGTGCCTGGATATGGGGCATCTACATCGTCCCAGCAGCAGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS GCA 90 bp | GGTACTGCCGGCCCAGGCAGCCCCACCGCCCCCATCCAGGCACAATaGTTCTCTGTCGATCTCCTGTGCAGAAGTGTGCAGCTCGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTAGPGSPTAPIQAQ*FSVDLLCRSVQLAG Trigger: TCCGGCGAGCTGCACACTTCTGCACAGGAGATCGACAGAGAAGCATTGTGCCTGGATGGGGGCGGTGGGGCTGCCTGGGCCGGCAGTACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS CCA 90 bp | AAAGCAGAAAAACATGCGGCAGGTTCCTGTGGCTGGTCCTGCTGCTaGGACGATGTAGATGCCCCATATCCAGGCACGGGTGCCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KAEKHAAGSCGWSCC*DDVDAPYPGTGARS Trigger: CGACCTGGCACCCGTGCCTGGATATGGGGCATCTACATCGTCCCAGCAGCAGGACCAGCCACAGGAACCTGCCGCATGTTTTTCTGCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS GCA 90 bp | CCATCCAGGCACAATGCTTCTCTGTCGATCTCCTGTGCAGAAGTGTaGAGCTCGCCGGAGCGGTTGTTTAGGGTCACATACTGGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: PSRHNASLSISCAEV*SSPERLFRVTYWPL Trigger: GAGTGGCCAGTATGTGACCCTAAACAACCGCTCCGGCGAGCTGCACACTTCTGCACAGGAGATCGACAGAGAAGCATTGTGCCTGGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS CCA 90 bp | AATGTCACTTATGCCAATGGTGAGGGTGGCACTGCCCAGCAGTGGTaGAGACCCACCATCCTCAGCTATGATGATGCTCACATACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NVTYANGEGGTAQQW*RPTILSYDDAHILV Trigger: GACCAGTATGTGAGCATCATCATAGCTGAGGATGGTGGGTCTCCACCACTGCTGGGCAGTGCCACCCTCACCATTGGCATAAGTGACATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS TCA 90 bp | ACTGTTGTCATTTTTATCCAACACAGTGAGGGCCACTGTAGCCACTaGTTCTCTGGGTGGCGTCCCACAGTCCACTGCTCGGACAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: TVVIFIQHSEGHCSH*FSGWRPTVHCSDSI Trigger: TATACTGTCCGAGCAGTGGACTGTGGGACGCCACCCAGAGAATCAGTGGCTACAGTGGCCCTCACTGTGTTGGATAAAAATGACAACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS GCA 90 bp | GATCTGTGCATTTGTCCCCAAGTCTCTATCCACAGCCTGGACTGTTaGAACTGGGGTGCCCACTGTAGCATTCCCATAAACGGTGACATT | + |
|
Preference number: 5 (lower is better) Translates to: DLCICPQVSIHSLDC*NWGAHCSIPINGDI Trigger: AATGTCACCGTTTATGGGAATGCTACAGTGGGCACCCCAGTTGCAACAGTCCAGGCTGTGGATAGAGACTTGGGGACAAATGCACAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS CCA 90 bp | ATTAATGTCACTTATGCCAATGGTGAGGGTGGCACTGCCCAGCAGTaGTGGAGACCCACCATCCTCAGCTATGATGATGCTCACATACTG | + |
|
Preference number: 5 (lower is better) Translates to: INVTYANGEGGTAQQ*WRPTILSYDDAHIL Trigger: CAGTATGTGAGCATCATCATAGCTGAGGATGGTGGGTCTCCACCACTGCTGGGCAGTGCCACCCTCACCATTGGCATAAGTGACATTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS CCA 90 bp | GCTCTCAACATACCCTTGCCTGTGTCTATGACAAAAATGTCACTCTaGTTCATTACGGACAGGGCTACCCATCCGTTCCTTCCAGCATCG | + |
|
Preference number: 5 (lower is better) Translates to: ALNIPLPVSMTKMSL*FITDRATHPFLPAS Trigger: CGATGCTGGAAGGAACGGATGGGTAGCCCTGTCCGTAATGAACCAGAGTGACATTTTTGTCATAGACACAGGCAAGGGTATGTTGAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS CCA 90 bp | TGCATTTGTCCCCAAGTCTCTATCCACAGCCTGGACTGTTGCAACTaGGGTGCCCACTGTAGCATTCCCATAAACGGTGACATTAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: CICPQVSIHSLDCCN*GAHCSIPINGDINL Trigger: CAAATTAATGTCACCGTTTATGGGAATGCTACAGTGGGCACCCCAGTTGCAACAGTCCAGGCTGTGGATAGAGACTTGGGGACAAATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS TCA 90 bp | AGGGTCCACAGCAGGATGCTCTATAGCCAATCGGGTATTTACAGGTaGATTTTCTGGGACCCAAACAGAGATTTCAGAAATGGGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: RVHSRMLYSQSGIYR*IFWDPNRDFRNGEL Trigger: CAGTTCCCCATTTCTGAAATCTCTGTTTGGGTCCCAGAAAATTCACCTGTAAATACCCGATTGGCTATAGAGCATCCTGCTGTGGACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS GCA 90 bp | AACAGGCTCCAGTTCTTTCAGGTACACAACACCATCCACCTCATTTaGGATATAACGTGGGACGATTTCTGGGGGTCTGAAAACGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: NRLQFFQVHNTIHLI*DITWDDFWGSENDF Trigger: AAAGTCGTTTTCAGACCCCCAGAAATCGTCCCACGTTATATCGCAAATGAGGTGGATGGTGTTGTGTACCTGAAAGAACTGGAGCCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS TCA 90 bp | ATAAATCCTTGGTTTCCTGTGGAACTTTCTGGCTGTAACTGTAAGTaGTCTGTGCATTTGTCCCCAAGTCTCTATCCACAGCCTGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: INPWFPVELSGCNCK*SVHLSPSLYPQPGL Trigger: CAGTCCAGGCTGTGGATAGAGACTTGGGGACAAATGCACAGATCACTTACAGTTACAGCCAGAAAGTTCCACAGGAAACCAAGGATTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS GCA 90 bp | CTTTGTGGTCTCCAACAAATATTCATTGTTGTACGGCTTGTAGGGTaGCAGCCTGAATGGCCCTTCACCATCCAAGAAGCAGTTAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LCGLQQIFIVVRLVG*QPEWPFTIQEAVNL Trigger: AAGATTAACTGCTTCTTGGATGGTGAAGGGCCATTCAGGCTGGCACCCTACAAGCCGTACAACAATGAATATTTGTTGGAGACCACAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS CCA 90 bp | CACAACACCATCCACCTCATTTGCGATATAACGTGGGACGATTTCTaGGGGTCTGAAAACGACTTTGATGATCGATACAAGAGCAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: HNTIHLICDITWDDF*GSENDFDDRYKSSD Trigger: ATCACTGCTCTTGTATCGATCATCAAAGTCGTTTTCAGACCCCCAGAAATCGTCCCACGTTATATCGCAAATGAGGTGGATGGTGTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR CAA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGGGAACTGCGGAGCATaGTCATTGATATCCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHGNCGA*SLISLM Trigger: CATCAGGGATATCAATGACAATGCTCCGCAGTTCCC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR CAA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATTCCTCCAGAGTGATGTaGCCAGTCTTGGGGTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHSSRVM*PVLGSI Trigger: AATTGACCCCAAGACTGGCAACATCACTCTGGAGGA...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS GCA 90 bp | ACTGTCAGCATCTGTAGCGTAGAGCTTTGTCAGAAAGGCATTGGGTaGGTTGTTTTCTTCAATGGTCAATTCTATCAAGGGCTGAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TVSICSVELCQKGIG*VVFFNGQFYQGLKE Trigger: TTCCTTCAGCCCTTGATAGAATTGACCATTGAAGAAAACAACGCACCCAATGCCTTTCTGACAAAGCTCTACGCTACAGATGCTGACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS CCA 90 bp | TTCTTTCAGGTACACAACACCATCCACCTCATTTGCGATATAACGTaGGACGATTTCTGGGGGTCTGAAAACGACTTTGATGATCGATAC | + |
|
Preference number: 5 (lower is better) Translates to: FFQVHNTIHLICDIT*DDFWGSENDFDDRY Trigger: GTATCGATCATCAAAGTCGTTTTCAGACCCCCAGAAATCGTCCCACGTTATATCGCAAATGAGGTGGATGGTGTTGTGTACCTGAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTCATGCAAGAAATGAAGTTCAATAACCAAACCGCCCCCAAACACATGAACGGGAACTGCGGAGCATaGTCATTGATATCCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FLMQEMKFNNQTAPKHMNGNCGA*SLISLM Trigger: CATCAGGGATATCAATGACAATGCTCCGCAGTTCCC...GTTCATGTGTTTGGGGGCGGTTTGGTTATTGAACTTCATTTCTTGCATGAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR CAA 90 bp | GAGGCGTTACACGAAACATCGCACTCTTCAGCAGGTCAAGTTTATAACACATGGAAGGCATTGGGTGCGTaGTTTTCTTCAATGGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: EALHETSHSSAGQVYNTWKALGA*FSSMVN Trigger: ATTGACCATTGAAGAAAACAACGCACCCAATGCCTT...CCATGTGTTATAAACTTGACCTGCTGAAGAGTGCGATGTTTCGTGTAACGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR CAA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATAAGCTGAAGTCCTTGTaGATGAACCTCGGACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHKLKSL*MNLGLL Trigger: CAACAGTCCGAGGTTCATCAACAAGGACTTCAGCTT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CAA 90 bp | ATCCCCATCTCATGCAAAGAAGGAAGCGATAGAAATCACCGACAAACCAGGTTTAAAAAGCTGAAGTCCTaGTTGATGAACCTCGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: IPISCKEGSDRNHRQTRFKKLKS*LMNLGL Trigger: CAGTCCGAGGTTCATCAACAAGGACTTCAGCTTTTT...AAACCTGGTTTGTCGGTGATTTCTATCGCTTCCTTCTTTGCATGAGATGGGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR CAA 90 bp | ATCCCCATCTCATGCAAAGAAGGAAGCGATAGAAATCACCGACAAACCAGGTTTGCTCTCAACATACCCTaGCCTGTGTCTATGACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: IPISCKEGSDRNHRQTRFALNIP*PVSMTK Trigger: TTTTGTCATAGACACAGGCAAGGGTATGTTGAGAGC...AAACCTGGTTTGTCGGTGATTTCTATCGCTTCCTTCTTTGCATGAGATGGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR CAA 90 bp | TTTCTCATGCAAGAAATGAAGTTCAATAACCAAACCGCCCCCAAACACATGAACTCCTCCAGAGTGATGTaGCCAGTCTTGGGGTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: FLMQEMKFNNQTAPKHMNSSRVM*PVLGSI Trigger: AATTGACCCCAAGACTGGCAACATCACTCTGGAGGA...GTTCATGTGTTTGGGGGCGGTTTGGTTATTGAACTTCATTTCTTGCATGAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS CCA 90 bp | CAACAAATATTCATTGTTGTACGGCTTGTAGGGTGCCAGCCTGAATaGCCCTTCACCATCCAAGAAGCAGTTAATCTTGTATTTACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QQIFIVVRLVGCQPE*PFTIQEAVNLVFTF Trigger: GAAGGTAAATACAAGATTAACTGCTTCTTGGATGGTGAAGGGCCATTCAGGCTGGCACCCTACAAGCCGTACAACAATGAATATTTGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CAA 90 bp | ATCCCCATCTCATGCAAAGAAGGAAGCGATAGAAATCACCGACAAACCAGGTTTAGGTGGAATAAATCCTaGGTTTCCTGTGGAACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IPISCKEGSDRNHRQTRFRWNKS*VSCGTF Trigger: GAAAGTTCCACAGGAAACCAAGGATTTATTCCACCT...AAACCTGGTTTGTCGGTGATTTCTATCGCTTCCTTCTTTGCATGAGATGGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
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| CDS-3UTR CAA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATAAAAAGCTGAAGTCCTaGTTGATGAACCTCGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHKKLKS*LMNLGL Trigger: CAGTCCGAGGTTCATCAACAAGGACTTCAGCTTTTT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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| CDS-3UTR CAA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATGCTCTCAACATACCCTaGCCTGTGTCTATGACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHALNIP*PVSMTK Trigger: TTTTGTCATAGACACAGGCAAGGGTATGTTGAGAGC...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATAGGTGGAATAAATCCTaGGTTTCCTGTGGAACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHRWNKS*VSCGTF Trigger: GAAAGTTCCACAGGAAACCAAGGATTTATTCCACCT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATAAGGCATTGGGTGCGTaGTTTTCTTCAATGGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHKALGA*FSSMVN Trigger: ATTGACCATTGAAGAAAACAACGCACCCAATGCCTT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATAGAGGAGGGTTATCGTaGATGTCCAGAAGAAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHRGGLS*MSRRRI Trigger: AATTCTTCTTCTGGACATCAACGATAACCCTCCTCT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CAA 90 bp | GAGGCGTTACACGAAACATCGCACTCTTCAGCAGGTCAAGTTTATAACACATGGTATGAGTTGGCTCTATaGAGATTTGTGGTTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EALHETSHSSAGQVYNTWYELAL*RFVVLS Trigger: AGAAAGAACCACAAATCTCAATAGAGCCAACTCATA...CCATGTGTTATAAACTTGACCTGCTGAAGAGTGCGATGTTTCGTGTAACGCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS TCA 90 bp | TGGGGTGCCCACTGTAGCATTCCCATAAACGGTGACATTAATTTGTaGGTCTATAAAGAGAGGACAATTGTCATTAATGTCACTTATGCC | + |
|
Preference number: 5 (lower is better) Translates to: WGAHCSIPINGDINL*VYKERTIVINVTYA Trigger: GGCATAAGTGACATTAATGACAATTGTCCTCTCTTTATAGACTCACAAATTAATGTCACCGTTTATGGGAATGCTACAGTGGGCACCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTCATGCAAGAAATGAAGTTCAATAACCAAACCGCCCCCAAACACATGAACACAGGGGCATTGTCATaGTCGTCTAAAAGTTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: FLMQEMKFNNQTAPKHMNTGALS*SSKSCT Trigger: AGTACAACTTTTAGACGACAATGACAATGCCCCTGT...GTTCATGTGTTTGGGGGCGGTTTGGTTATTGAACTTCATTTCTTGCATGAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR CAA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATATGAACCTCGGACTGTaGTCATTTTTATCCAACACA | + |
|
Preference number: 5 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHMNLGL*SFLSNT Trigger: TGTGTTGGATAAAAATGACAACAGTCCGAGGTTCAT...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTGATAAGTAAAGCGACTCACTTTGAAGCTAACACATTTCTTGTTTACACAAAGCTGAAGTCCTTGTaGATGAACCTCGGACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RVISKATHFEANTFLVYTKLKSL*MNLGLL Trigger: CAACAGTCCGAGGTTCATCAACAAGGACTTCAGCTT...TGTGTAAACAAGAAATGTGTTAGCTTCAAAGTGAGTCGCTTTACTTATCACCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR CAA 90 bp | TTTCTCATGCAAGAAATGAAGTTCAATAACCAAACCGCCCCCAAACACATGAACAGAGGAGGGTTATCGTaGATGTCCAGAAGAAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: FLMQEMKFNNQTAPKHMNRGGLS*MSRRRI Trigger: AATTCTTCTTCTGGACATCAACGATAACCCTCCTCT...GTTCATGTGTTTGGGGGCGGTTTGGTTATTGAACTTCATTTCTTGCATGAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS-3UTR CAA 90 bp | CAAAGACTACCTATGGCAGTTACAATGTCCCTCCATGTTATTCCACAATGGCATTATGAGTTGGCTCTATaGAGATTTGTGGTTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QRLPMAVTMSLHVIPQWHYELAL*RFVVLS Trigger: AGAAAGAACCACAAATCTCAATAGAGCCAACTCATA...ATGCCATTGTGGAATAACATGGAGGGACATTGTAACTGCCATAGGTAGTCTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS TCA 90 bp | AGAGCTACCAATGTGGGCATACAGGACATAGATTCTACCTTCCTATaGGTTGGCTCTATTGAGATTTGTGGTTCTTTCTCTTCTATATTA | + |
|
Preference number: 5 (lower is better) Translates to: RATNVGIQDIDSTFL*VGSIEICGSFSSIL Trigger: TAATATAGAAGAGAAAGAACCACAAATCTCAATAGAGCCAACTCATAGGAAGGTAGAATCTATGTCCTGTATGCCCACATTGGTAGCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTGATAAGTAAAGCGACTCACTTTGAAGCTAACACATTTCTTGTTTACACAATGAACCTCGGACTGTaGTCATTTTTATCCAACACA | + |
|
Preference number: 5 (lower is better) Translates to: RVISKATHFEANTFLVYTMNLGL*SFLSNT Trigger: TGTGTTGGATAAAAATGACAACAGTCCGAGGTTCAT...TGTGTAAACAAGAAATGTGTTAGCTTCAAAGTGAGTCGCTTTACTTATCACCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061628.7 |
||
| CDS CCA 72 bp | CACGGGTGCCAGGTCGCCGGGCGCAAGCTCACTGCCTaGACCAGCAAGCTGCGCGCGTTCCCTCGGCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: HGCQVAGRKLTA*TSKLRAFPRPR Trigger: GCGCGGCCGAGGGAACGCGCGCAGCTTGCTGGTCCAGGCAGTGAGCTTGCGCCCGGCGACCTGGCACCCGTG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS GCA 72 bp | CAGGCACGGGTGCCAGGTCGCCGGGCGCAAGCTCACTaGCTGGACCAGCAAGCTGCGCGCGTTCCCTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QARVPGRRAQAH*LDQQAARVPSA Trigger: GGCCGAGGGAACGCGCGCAGCTTGCTGGTCCAGGCAGTGAGCTTGCGCCCGGCGACCTGGCACCCGTGCCTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS GCA 72 bp | CTGGGACGATGTAGATGCCCCATATCCAGGCACGGGTaGCAGGTCGCCGGGCGCAAGCTCACTGCCTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: LGRCRCPISRHG*QVAGRKLTAWT Trigger: GGTCCAGGCAGTGAGCTTGCGCCCGGCGACCTGGCACCCGTGCCTGGATATGGGGCATCTACATCGTCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS GCA 72 bp | AAGAGTCAGAAGAAGGAGAGGAGGCAATGGAGGTACTaGCGGCCCAGGCAGCCCCACCGCCCCCATCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: KSQKKERRQWRY*RPRQPHRPHPG Trigger: GCCTGGATGGGGGCGGTGGGGCTGCCTGGGCCGGCAGTACCTCCATTGCCTCCTCTCCTTCTTCTGACTCTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS GCA 72 bp | GGCCCAGGCAGCCCCACCGCCCCCATCCAGGCACAATaGTTCTCTGTCGATCTCCTGTGCAGAAGTGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPGSPTAPIQAQ*FSVDLLCRSVQ Trigger: CTGCACACTTCTGCACAGGAGATCGACAGAGAAGCATTGTGCCTGGATGGGGGCGGTGGGGCTGCCTGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS CCA 72 bp | TGCAGCTCGCCGGAGCGGTTGTTTAGGGTCACATACTaGCCACTCAGTCCCCCGGAGGCCAAGCTGAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: CSSPERLFRVTY*PLSPPEAKLKE Trigger: CTCTTTCAGCTTGGCCTCCGGGGGACTGAGTGGCCAGTATGTGACCCTAAACAACCGCTCCGGCGAGCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS CAA 90 bp | TCTCTGTCGATCTCCTGTGCAGAAGTGTGCAGCTCGCCGGAGCGGTaGTTTAGGGTCACATACTGGCCACTCAGTCCCCCGGAGGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLSISCAEVCSSPER*FRVTYWPLSPPEAK Trigger: CTTGGCCTCCGGGGGACTGAGTGGCCAGTATGTGACCCTAAACAACCGCTCCGGCGAGCTGCACACTTCTGCACAGGAGATCGACAGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS CCA 72 bp | AAACATGCGGCAGGTTCCTGTGGCTGGTCCTGCTGCTaGGACGATGTAGATGCCCCATATCCAGGCACGGGT | + |
|
Preference number: 6 (lower is better) Translates to: KHAAGSCGWSCC*DDVDAPYPGTG Trigger: ACCCGTGCCTGGATATGGGGCATCTACATCGTCCCAGCAGCAGGACCAGCCACAGGAACCTGCCGCATGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS CAA 72 bp | ATCTCCTGTGCAGAAGTGTGCAGCTCGCCGGAGCGGTaGTTTAGGGTCACATACTGGCCACTCAGTCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: ISCAEVCSSPER*FRVTYWPLSPP Trigger: CGGGGGACTGAGTGGCCAGTATGTGACCCTAAACAACCGCTCCGGCGAGCTGCACACTTCTGCACAGGAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS GCA 72 bp | GAAAAACATGCGGCAGGTTCCTGTGGCTGGTCCTGCTaGTGGGACGATGTAGATGCCCCATATCCAGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: EKHAAGSCGWSC*WDDVDAPYPGT Trigger: CGTGCCTGGATATGGGGCATCTACATCGTCCCAGCAGCAGGACCAGCCACAGGAACCTGCCGCATGTTTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS CCA 72 bp | AAGAGGAAAAGCAGAAAAACATGCGGCAGGTTCCTGTaGCTGGTCCTGCTGCTGGGACGATGTAGATGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: KRKSRKTCGRFL*LVLLLGRCRCP Trigger: GGGGCATCTACATCGTCCCAGCAGCAGGACCAGCCACAGGAACCTGCCGCATGTTTTTCTGCTTTTCCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS TCA 72 bp | ATTTTTATCCAACACAGTGAGGGCCACTGTAGCCACTaGTTCTCTGGGTGGCGTCCCACAGTCCACTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: IFIQHSEGHCSH*FSGWRPTVHCS Trigger: CGAGCAGTGGACTGTGGGACGCCACCCAGAGAATCAGTGGCTACAGTGGCCCTCACTGTGTTGGATAAAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS GCA 72 bp | CACAATGCTTCTCTGTCGATCTCCTGTGCAGAAGTGTaGAGCTCGCCGGAGCGGTTGTTTAGGGTCACATAC | + |
|
Preference number: 6 (lower is better) Translates to: HNASLSISCAEV*SSPERLFRVTY Trigger: GTATGTGACCCTAAACAACCGCTCCGGCGAGCTGCACACTTCTGCACAGGAGATCGACAGAGAAGCATTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS TCA 72 bp | CATACTGGTCCTGGGTTTCTCTGTCCAAAGCACCCATaGCAATCAAGTAGGGTGTGCGCTCCCCGTTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: HTGPGFLCPKHP*QSSRVCAPRSH Trigger: ATGAGAACGGGGAGCGCACACCCTACTTGATTGTCATGGGTGCTTTGGACAGAGAAACCCAGGACCAGTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS TCA 72 bp | ACCATGACTGTGGAGTGGAGAGGCTCAGGGTATCCGTaGTCACTCACTTTCACCAGTAAGCGATGCAACCCA | + |
|
Preference number: 6 (lower is better) Translates to: TMTVEWRGSGYP*SLTFTSKRCNP Trigger: TGGGTTGCATCGCTTACTGGTGAAAGTGAGTGATCACGGATACCCTGAGCCTCTCCACTCCACAGTCATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS CCA 72 bp | GACCCACCATCCTCAGCTATGATGATGCTCACATACTaGTCCTGGGTTTCTCTGTCCAAAGCACCCATGACA | + |
|
Preference number: 6 (lower is better) Translates to: DPPSSAMMMLTY*SWVSLSKAPMT Trigger: TGTCATGGGTGCTTTGGACAGAGAAACCCAGGACCAGTATGTGAGCATCATCATAGCTGAGGATGGTGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS GCA 72 bp | CTCCAACAAATATTCATTGTTGTACGGCTTGTAGGGTaGCAGCCTGAATGGCCCTTCACCATCCAAGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LQQIFIVVRLVG*QPEWPFTIQEA Trigger: TGCTTCTTGGATGGTGAAGGGCCATTCAGGCTGGCACCCTACAAGCCGTACAACAATGAATATTTGTTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS GCA 72 bp | CAGTTCTTTCAGGTACACAACACCATCCACCTCATTTaGGATATAACGTGGGACGATTTCTGGGGGTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QFFQVHNTIHLI*DITWDDFWGSE Trigger: TTCAGACCCCCAGAAATCGTCCCACGTTATATCGCAAATGAGGTGGATGGTGTTGTGTACCTGAAAGAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS CCA 72 bp | TTCATTGTTGTACGGCTTGTAGGGTGCCAGCCTGAATaGCCCTTCACCATCCAAGAAGCAGTTAATCTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: FIVVRLVGCQPE*PFTIQEAVNLV Trigger: TACAAGATTAACTGCTTCTTGGATGGTGAAGGGCCATTCAGGCTGGCACCCTACAAGCCGTACAACAATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS CAA 90 bp | TCTGGGACCCAAACAGAGATTTCAGAAATGGGGAACTGCGGAGCATaGTCATTGATATCCCTGATGGCAATTTTCACCTTCACAAACCGA | + |
|
Preference number: 6 (lower is better) Translates to: SGTQTEISEMGNCGA*SLISLMAIFTFTNR Trigger: TCGGTTTGTGAAGGTGAAAATTGCCATCAGGGATATCAATGACAATGCTCCGCAGTTCCCCATTTCTGAAATCTCTGTTTGGGTCCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS CCA 72 bp | GTACACAACACCATCCACCTCATTTGCGATATAACGTaGGACGATTTCTGGGGGTCTGAAAACGACTTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: VHNTIHLICDIT*DDFWGSENDFD Trigger: ATCAAAGTCGTTTTCAGACCCCCAGAAATCGTCCCACGTTATATCGCAAATGAGGTGGATGGTGTTGTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS CCA 72 bp | ATCCACCTCATTTGCGATATAACGTGGGACGATTTCTaGGGGTCTGAAAACGACTTTGATGATCGATACAAG | + |
|
Preference number: 6 (lower is better) Translates to: IHLICDITWDDF*GSENDFDDRYK Trigger: CTTGTATCGATCATCAAAGTCGTTTTCAGACCCCCAGAAATCGTCCCACGTTATATCGCAAATGAGGTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS CAA 72 bp | GAGATTTCAGAAATGGGGAACTGCGGAGCATTGTCATaGATATCCCTGATGGCAATTTTCACCTTCACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: EISEMGNCGALS*ISLMAIFTFTN Trigger: GTTTGTGAAGGTGAAAATTGCCATCAGGGATATCAATGACAATGCTCCGCAGTTCCCCATTTCTGAAATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS CAA 72 bp | CAAACAGAGATTTCAGAAATGGGGAACTGCGGAGCATaGTCATTGATATCCCTGATGGCAATTTTCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QTEISEMGNCGA*SLISLMAIFTF Trigger: GAAGGTGAAAATTGCCATCAGGGATATCAATGACAATGCTCCGCAGTTCCCCATTTCTGAAATCTCTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS CAA 72 bp | AAAAAGCTGAAGTCCTTGTTGATGAACCTCGGACTGTaGTCATTTTTATCCAACACAGTGAGGGCCACTGTA | + |
|
Preference number: 6 (lower is better) Translates to: KKLKSLLMNLGL*SFLSNTVRATV Trigger: TACAGTGGCCCTCACTGTGTTGGATAAAAATGACAACAGTCCGAGGTTCATCAACAAGGACTTCAGCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS TCA 72 bp | AGCAGGATGCTCTATAGCCAATCGGGTATTTACAGGTaGATTTTCTGGGACCCAAACAGAGATTTCAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SRMLYSQSGIYR*IFWDPNRDFRN Trigger: ATTTCTGAAATCTCTGTTTGGGTCCCAGAAAATTCACCTGTAAATACCCGATTGGCTATAGAGCATCCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS TCA 72 bp | AATGTGGGCATACAGGACATAGATTCTACCTTCCTATaGGTTGGCTCTATTGAGATTTGTGGTTCTTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: NVGIQDIDSTFL*VGSIEICGSFS Trigger: AGAGAAAGAACCACAAATCTCAATAGAGCCAACTCATAGGAAGGTAGAATCTATGTCCTGTATGCCCACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS TCA 72 bp | TTGTACTTTAATGATTCTCTTGACATGAAATCCCTCTaGGTTCCAGGCCACTACAGCTATTTCATAGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LYFNDSLDMKSL*VPGHYSYFIEG Trigger: TCCTTCTATGAAATAGCTGTAGTGGCCTGGAACTCAGAGGGATTTCATGTCAAGAGAATCATTAAAGTACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
||
| CDS TCA 72 bp | CACTGTAGCATTCCCATAAACGGTGACATTAATTTGTaGGTCTATAAAGAGAGGACAATTGTCATTAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: HCSIPINGDINL*VYKERTIVINV Trigger: GACATTAATGACAATTGTCCTCTCTTTATAGACTCACAAATTAATGTCACCGTTTATGGGAATGCTACAGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061628.7 ENSMUST00000192557.2 |
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