RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCDH17 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035566

Ensembl transcript IDs: ENSMUST00000071370.7

Found 355 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTTGTGGGCACTTCAGATGTTCACTAAAAGCCTTAAAGCAGCACTaGTCCTTTGCCATCCCTGTAAAGTGGGTTTTCACCGGAAGTGAT +
Preference number: 1 (lower is better)
Translates to: TCGHFRCSLKALKQH*SFAIPVKWVFTGSD
Trigger: ATCACTTCCGGTGAAAACCCACTTTACAGGGATGGCAAAGGACCAGTGCTGCTTTAAGGCTTTTAGTGAACATCTGAAGTGCCCACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR TCA 90 bp CCCAATTATGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATaGTTTTGGCATCACAAAGGCTTCCTTGGAAGCCAAGCACCAGAG +
Preference number: 1 (lower is better)
Translates to: PNYVPSITAIVSSKV*FWHHKGFLGSQAPE
Trigger: CTCTGGTGCTTGGCTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACATAATTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR GCA 90 bp TGTTTACCACAAATATGGGTTAATGTTTGGTGTAGCTTGGACTACTaGAAGGTCTTTTCGGGACTTTCAGTAGAAGCCTGTGATGTCAGC +
Preference number: 1 (lower is better)
Translates to: CLPQIWVNVWCSLDY*KVFSGLSVEACDVS
Trigger: GCTGACATCACAGGCTTCTACTGAAAGTCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTGTGGTAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR GCA 90 bp TATTTGGGGGTCTTCTTTGTGGTGTGCAGTAGAATGCATCAGTTCTaGATTAATGAATCAAGGGAAGGCAACACCGCTATTAGTAATAGC +
Preference number: 1 (lower is better)
Translates to: YLGVFFVVCSRMHQF*INESREGNTAISNS
Trigger: GCTATTACTAATAGCGGTGTTGCCTTCCCTTGATTCATTAATGCAGAACTGATGCATTCTACTGCACACCACAAAGAAGACCCCCAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR CCA 90 bp TCTATGCTTGGCAGGTACTTTATACAGAAATGTTTACCACAAATATaGGTTAATGTTTGGTGTAGCTTGGACTACTGCAAGGTCTTTTCG +
Preference number: 1 (lower is better)
Translates to: SMLGRYFIQKCLPQI*VNVWCSLDYCKVFS
Trigger: CGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTGTGGTAAACATTTCTGTATAAAGTACCTGCCAAGCATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR CCA 90 bp AGGTACTTTATACAGAAATGTTTACCACAAATATGGGTTAATGTTTaGTGTAGCTTGGACTACTGCAAGGTCTTTTCGGGACTTTCAGTA +
Preference number: 1 (lower is better)
Translates to: RYFIQKCLPQIWVNV*CSLDYCKVFSGLSV
Trigger: TACTGAAAGTCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTGTGGTAAACATTTCTGTATAAAGTACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR TCA 90 bp TGGTCATATCTATGTGAAAATAGTATCATTTCCAGAACATTTCATTaGGCTATAGCAAGGTCTTCCTATGCTGAGTTCATAATCTCCTCC +
Preference number: 1 (lower is better)
Translates to: WSYLCENSIISRTFH*AIARSSYAEFIISS
Trigger: GGAGGAGATTATGAACTCAGCATAGGAAGACCTTGCTATAGCTCAATGAAATGTTCTGGAAATGATACTATTTTCACATAGATATGACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR TCA 90 bp TTTCTGGTCTTTCAGTTAGCTTTATCGGCTCACTCAAACACACTTTaGACAGAATTGTGTACTGTATACTTGGTAGACTATACATTAAAC +
Preference number: 1 (lower is better)
Translates to: FLVFQLALSAHSNTL*TELCTVYLVDYTLN
Trigger: GTTTAATGTATAGTCTACCAAGTATACAGTACACAATTCTGTTCAAAGTGTGTTTGAGTGAGCCGATAAAGCTAACTGAAAGACCAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR GCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGTTTGCTCTGAGGCCCTaGTCCCCACGCTCCATGGGG +
Preference number: 2 (lower is better)
Translates to: SHCFLKGMILASQRLPWKFALRP*SPRSMG
Trigger: CCCCATGGAGCGTGGGGAGCAGGGCCTCAGAGCAAA...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR TCA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTCGAGAGACTTTGCTCTaGGGCCCTGCTCCCCACGCT +
Preference number: 2 (lower is better)
Translates to: LGHMIHLTELTASSSTFTRETLL*GPAPHA
Trigger: AGCGTGGGGAGCAGGGCCTCAGAGCAAAGTCTCTCG...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR CAA 90 bp CCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTaGGAAGCCAAGCACCAGAGTTCTGTGTTAAAGGCAGGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: PLFPQRYDFGITKAS*EAKHQSSVLKAGPR
Trigger: CCTGGGACCTGCCTTTAACACAGAACTCTGGTGCTTGGCTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR GCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGGCAGCACTGGTCCTTTaGCATCCCTGTAAAGTGGGT +
Preference number: 2 (lower is better)
Translates to: SHCFLKGMILASQRLPWKAALVL*HPCKVG
Trigger: ACCCACTTTACAGGGATGGCAAAGGACCAGTGCTGC...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR TCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGAAGACCCAGACCTCTTaGGACACAGCACACAATGCA +
Preference number: 2 (lower is better)
Translates to: SHCFLKGMILASQRLPWKKTQTS*DTAHNA
Trigger: TGCATTGTGTGCTGTGTCTCAAGAGGTCTGGGTCTT...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR TCA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTCTGGGGCCAGGAGAGTaGGACCTTAATCAGGTCTCA +
Preference number: 2 (lower is better)
Translates to: LGHMIHLTELTASSSTFTLGPGE*DLNQVS
Trigger: TGAGACCTGATTAAGGTCTCACTCTCCTGGCCCCAG...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR CCA 90 bp TGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAGCTCCCCACGCTCCATaGGGAAAAGGAAGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: CTIHYSHCFLKGMILASQAPHAP*GKGSRK
Trigger: TTTCCTGCTTCCTTTTCCCCATGGAGCGTGGGGAGC...TTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR CAA 90 bp TTATGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATGATTTaGGCATCACAAAGGCTTCCTTGGAAGCCAAGCACCAGAGTTCTG +
Preference number: 2 (lower is better)
Translates to: LCTIHYSHCFLKGMI*ASQRLPWKPSTRVL
Trigger: CAGAACTCTGGTGCTTGGCTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR CCA 90 bp TGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAGCCTTAAAGCAGCACTaGTCCTTTGCCATCCCTGTA +
Preference number: 2 (lower is better)
Translates to: CTIHYSHCFLKGMILASQALKQH*SFAIPV
Trigger: TACAGGGATGGCAAAGGACCAGTGCTGCTTTAAGGC...TTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR TCA 90 bp TGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAATTCAGTAGAAGCCTGTaGTGTCAGCTAGTAGTCCAC +
Preference number: 2 (lower is better)
Translates to: CTIHYSHCFLKGMILASQFSRSL*CQLVVH
Trigger: GTGGACTACTAGCTGACATCACAGGCTTCTACTGAA...TTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR CAA 90 bp CTTACGAATATGATGTGTACACACACCGGAACCACTGAAGATACTTaGAGAGCCAACCAATGTTATGATATCTACATAGGCAGAAGCTTC +
Preference number: 2 (lower is better)
Translates to: LTNMMCTHTGTTEDT*RANQCYDIYIGRSF
Trigger: GAAGCTTCTGCCTATGTAGATATCATAACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCATATTCGTAAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR TCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGGGTTTTCACCGGAAGTaGTCATTTTCAAATCAACAG +
Preference number: 2 (lower is better)
Translates to: SHCFLKGMILASQRLPWKGFHRK*SFSNQQ
Trigger: CTGTTGATTTGAAAATGATCACTTCCGGTGAAAACC...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR TCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGGAGGTGTCTTACAAATaGCCAAGGGTTTTTGTTGTT +
Preference number: 2 (lower is better)
Translates to: SHCFLKGMILASQRLPWKEVSYK*PRVFVV
Trigger: AACAACAAAAACCCTTGGTCATTTGTAAGACACCTC...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR TCA 90 bp TGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAAAAGCTCAGAGTCCTaGCTTGAACTACCACCAACT +
Preference number: 2 (lower is better)
Translates to: CTIHYSHCFLKGMILASQKSSES*LELPPT
Trigger: AGTTGGTGGTAGTTCAAGTCAGGACTCTGAGCTTTT...TTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR CCA 90 bp GTTGTTGTCGTCGTCGTTGTTCACCAATCACTTGGTACAGCGAAGAACCTTATGTGTTTACCACAAATATaGGTTAATGTTTGGTGTAGC +
Preference number: 2 (lower is better)
Translates to: VVVVVVVHQSLGTAKNLMCLPQI*VNVWCS
Trigger: GCTACACCAAACATTAACCCATATTTGTGGTAAACA...CATAAGGTTCTTCGCTGTACCAAGTGATTGGTGAACAACGACGACGACAACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR CAA 90 bp ATACAGAAATGTTTACCACAAATATGGGTTAATGTTTGGTGTAGCTaGGACTACTGCAAGGTCTTTTCGGGACTTTCAGTAGAAGCCTGT +
Preference number: 2 (lower is better)
Translates to: IQKCLPQIWVNVWCS*DYCKVFSGLSVEAC
Trigger: ACAGGCTTCTACTGAAAGTCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTGTGGTAAACATTTCTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR TCA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGCCACTGAAGATACTTTaGGAGCCAACCAATGTTATG +
Preference number: 2 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQPLKIL*EPTNVM
Trigger: CATAACATTGGTTGGCTCTCAAAGTATCTTCAGTGG...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR GCA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTTGTGTTGAGTTTCCTTaGACACTGCTTGAGATGTCA +
Preference number: 2 (lower is better)
Translates to: LGHMIHLTELTASSSTFTCVEFP*TLLEMS
Trigger: TGACATCTCAAGCAGTGTGCAAGGAAACTCAACACA...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR CCA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGGCCATCCCTGTAAAGTaGGTTTTCACCGGAAGTGAT +
Preference number: 2 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKAIPVK*VFTGSD
Trigger: ATCACTTCCGGTGAAAACCCACTTTACAGGGATGGC...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR CCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGAAAAGAACATACTTGTaGGCACTTCAGATGTTCACT +
Preference number: 2 (lower is better)
Translates to: SHCFLKGMILASQRLPWKKRTYL*ALQMFT
Trigger: AGTGAACATCTGAAGTGCCCACAAGTATGTTCTTTT...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR CCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTACTAATGGTATGGAATaGTCTTTGTGTTTCTATGCT +
Preference number: 2 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCTNGME*SLCFYA
Trigger: AGCATAGAAACACAAAGACCATTCCATACCATTAGT...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR CCA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTCATAAGGAAGTAGGTTaGAAACTTGCTAAATGCCAC +
Preference number: 2 (lower is better)
Translates to: LGHMIHLTELTASSSTFTHKEVG*KLAKCH
Trigger: GTGGCATTTAGCAAGTTTCCAACCTACTTCCTTATG...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR CAA 90 bp ACTGTAACGATTCTACAAACAAAATGTGCTTGTCTTGGTGCCTCTTaGTACCTTAGGAGTCTTCTGTATACTGGAATCTGGTTAATATTC +
Preference number: 2 (lower is better)
Translates to: TVTILQTKCACLGAS*YLRSLLYTGIWLIF
Trigger: GAATATTAACCAGATTCCAGTATACAGAAGACTCCTAAGGTACAAAGAGGCACCAAGACAAGCACATTTTGTTTGTAGAATCGTTACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR TCA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGGGGGGAACCTTCTTGTaGTTTAGCATGACTTTAATC +
Preference number: 2 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKGGTFL*FSMTLI
Trigger: GATTAAAGTCATGCTAAATCACAAGAAGGTTCCCCC...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR GCA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTTCTACAAACAAAATGTaGTTGTCTTGGTGCCTCTTT +
Preference number: 2 (lower is better)
Translates to: LGHMIHLTELTASSSTFTSTNKM*LSWCLF
Trigger: AAAGAGGCACCAAGACAAGCACATTTTGTTTGTAGA...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR CCA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTCTCAAGATGACTACATaGAAACAGTTTTTCAGCAAC +
Preference number: 2 (lower is better)
Translates to: LGHMIHLTELTASSSTFTLKMTT*KQFFSN
Trigger: GTTGCTGAAAAACTGTTTCCATGTAGTCATCTTGAG...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR CCA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGATGTTTGGTGTAGCTTaGACTACTGCAAGGTCTTTT +
Preference number: 2 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKMFGVA*TTARSF
Trigger: AAAAGACCTTGCAGTAGTCCAAGCTACACCAAACAT...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR CAA 90 bp GTTGTTGTCGTCGTCGTTGTTCACCAATCACTTGGTACAGCGAAGAACCTTATGTCAATCCATCACATGTaGGCACAACCAGTTCTGAGA +
Preference number: 3 (lower is better)
Translates to: VVVVVVVHQSLGTAKNLMSIHHM*AQPVLR
Trigger: TCTCAGAACTGGTTGTGCCAACATGTGATGGATTGA...CATAAGGTTCTTCGCTGTACCAAGTGATTGGTGAACAACGACGACGACAACAAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR TCA 72 bp GGGTGGATTAAAATTTGTCCAGTTGCTTTTTCCACCTaGCTGCAACCCAGGCAGCACTCTGCATTCATAGTA +
Preference number: 3 (lower is better)
Translates to: GWIKICPVAFST*LQPRQHSAFIV
Trigger: TACTATGAATGCAGAGTGCTGCCTGGGTTGCAGTCAGGTGGAAAAAGCAACTGGACAAATTTTAATCCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR CAA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTGGTATGGAATGGTCTTaGTGTTTCTATGCTTGGCAG +
Preference number: 3 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCGMEWS*CFYAWQ
Trigger: CTGCCAAGCATAGAAACACAAAGACCATTCCATACC...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR TCA 72 bp GTTAAAAAGCACATTTTGTTTAAGACCCAGACCTCTTaGGACACAGCACACAATGCATGTAACCAGCACTGG +
Preference number: 3 (lower is better)
Translates to: VKKHILFKTQTS*DTAHNACNQHW
Trigger: CCAGTGCTGGTTACATGCATTGTGTGCTGTGTCTCAAGAGGTCTGGGTCTTAAACAAAATGTGCTTTTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR TCA 72 bp GTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATaGTTTTGGCATCACAAAGGCTTCCTTGGAAGCCAA +
Preference number: 3 (lower is better)
Translates to: VPSITAIVSSKV*FWHHKGFLGSQ
Trigger: TTGGCTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR GCA 72 bp CAAATATGGGTTAATGTTTGGTGTAGCTTGGACTACTaGAAGGTCTTTTCGGGACTTTCAGTAGAAGCCTGT +
Preference number: 3 (lower is better)
Translates to: QIWVNVWCSLDY*KVFSGLSVEAC
Trigger: ACAGGCTTCTACTGAAAGTCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR GCA 72 bp GTCTTCTTTGTGGTGTGCAGTAGAATGCATCAGTTCTaGATTAATGAATCAAGGGAAGGCAACACCGCTATT +
Preference number: 3 (lower is better)
Translates to: VFFVVCSRMHQF*INESREGNTAI
Trigger: AATAGCGGTGTTGCCTTCCCTTGATTCATTAATGCAGAACTGATGCATTCTACTGCACACCACAAAGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR GCA 72 bp CATATTTGGGGGTCTTCTTTGTGGTGTGCAGTAGAATaGATCAGTTCTGCATTAATGAATCAAGGGAAGGCA +
Preference number: 3 (lower is better)
Translates to: HIWGSSLWCAVE*ISSALMNQGKA
Trigger: TGCCTTCCCTTGATTCATTAATGCAGAACTGATGCATTCTACTGCACACCACAAAGAAGACCCCCAAATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR CAA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTTTGTCAAAAGGTAACTaGTCTCATCCTCCTTTTTGC +
Preference number: 3 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCLSKGN*SHPPFC
Trigger: GCAAAAAGGAGGATGAGACAAGTTACCTTTTGACAA...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR CAA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTGTGAAAAGAACATACTaGTGGGCACTTCAGATGTTC +
Preference number: 3 (lower is better)
Translates to: LGHMIHLTELTASSSTFTVKRTY*WALQMF
Trigger: GAACATCTGAAGTGCCCACAAGTATGTTCTTTTCAC...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR CAA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTAACCTATTGTTTGTGTaGAGTTTCCTTGCACACTGC +
Preference number: 3 (lower is better)
Translates to: LGHMIHLTELTASSSTFTNLLFV*SFLAHC
Trigger: GCAGTGTGCAAGGAAACTCAACACAAACAATAGGTT...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR TCA 72 bp ACACATGCATTTGAACATTTCGTACGCTTACGAATATaGTGTGTACACACACCGGAACCACTGAAGATACTT +
Preference number: 3 (lower is better)
Translates to: THAFEHFVRLRI*CVHTPEPLKIL
Trigger: AAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCATATTCGTAAGCGTACGAAATGTTCAAATGCATGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR GCA 72 bp GTTGTGATACCATATTTGGGGGTCTTCTTTGTGGTGTaGAGTAGAATGCATCAGTTCTGCATTAATGAATCA +
Preference number: 3 (lower is better)
Translates to: VVIPYLGVFFVV*SRMHQFCINES
Trigger: TGATTCATTAATGCAGAACTGATGCATTCTACTGCACACCACAAAGAAGACCCCCAAATATGGTATCACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR CCA 72 bp ATTTTTGACATTTATACTGTTTCTATACTGGCTTGGTaGCAAGAAAAGAAGGCACAGAAATCCCTCCCAGTT +
Preference number: 3 (lower is better)
Translates to: IFDIYTVSILAW*QEKKAQKSLPV
Trigger: AACTGGGAGGGATTTCTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR CAA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTTACCTTCCTAACAGATaGTCAAAAGGTAACTTGTCT +
Preference number: 3 (lower is better)
Translates to: LGHMIHLTELTASSSTFTYLPNR*SKGNLS
Trigger: AGACAAGTTACCTTTTGACAATCTGTTAGGAAGGTA...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR-3UTR CAA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGAATGTTTGGTGTAGCTaGGACTACTGCAAGGTCTTT +
Preference number: 3 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKNVWCS*DYCKVF
Trigger: AAAGACCTTGCAGTAGTCCAAGCTACACCAAACATT...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR CCA 72 bp ATTATTTTTGACATTTATACTGTTTCTATACTGGCTTaGTGGCAAGAAAAGAAGGCACAGAAATCCCTCCCA +
Preference number: 3 (lower is better)
Translates to: IIFDIYTVSILA*WQEKKAQKSLP
Trigger: TGGGAGGGATTTCTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAAAATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR GCA 72 bp GAAAATAACCTATTCACTGGGTATTGTACTTCAATGTaGCACAGTGGCACTATACATGGGTACTTTATTTTT +
Preference number: 3 (lower is better)
Translates to: ENNLFTGYCTSM*HSGTIHGYFIF
Trigger: AAAAATAAAGTACCCATGTATAGTGCCACTGTGGCACATTGAAGTACAATACCCAGTGAATAGGTTATTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR TCA 72 bp GAGTCTTCTGTATACTGGAATCTGGTTAATATTCAATaGAACAAAAAGCCCAACATAGAGATGAACCAAAGT +
Preference number: 3 (lower is better)
Translates to: ESSVYWNLVNIQ*NKKPNIEMNQS
Trigger: ACTTTGGTTCATCTCTATGTTGGGCTTTTTGTTTCATTGAATATTAACCAGATTCCAGTATACAGAAGACTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR TCA 72 bp CTATGTGAAAATAGTATCATTTCCAGAACATTTCATTaGGCTATAGCAAGGTCTTCCTATGCTGAGTTCATA +
Preference number: 3 (lower is better)
Translates to: LCENSIISRTFH*AIARSSYAEFI
Trigger: TATGAACTCAGCATAGGAAGACCTTGCTATAGCTCAATGAAATGTTCTGGAAATGATACTATTTTCACATAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp GTTGTTGTCGTCGTCGTTGTTCACCAATCACTTGGTACAGCGAAGAACCTTATGGGCGGAAGCCCGGGCTaGAGTCGGGCATCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: VVVVVVVHQSLGTAKNLMGGSPG*SRASLP
Trigger: CGGCAAGGATGCCCGACTGCAGCCCGGGCTTCCGCC...CATAAGGTTCTTCGCTGTACCAAGTGATTGGTGAACAACGACGACGACAACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTCTGACCGGGGCGAGCTaGGGGGCAGGCGGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCLTGAS*GAGGFG
Trigger: ACCAAACCCGCCTGCCCCTCAGCTCGCCCCGGTCAG...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp GTTGTTGTCGTCGTCGTTGTTCACCAATCACTTGGTACAGCGAAGAACCTTATGGCTGGTGTGGCAGCCTaGGTGCCCCTGCGGGACAGT +
Preference number: 4 (lower is better)
Translates to: VVVVVVVHQSLGTAKNLMAGVAA*VPLRDS
Trigger: ACTGTCCCGCAGGGGCACGCAGGCTGCCACACCAGC...CATAAGGTTCTTCGCTGTACCAAGTGATTGGTGAACAACGACGACGACAACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGACTTGCTCCTCCCGCTaGCGCTGCCGCGCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: SHCFLKGMILASQRLPWKTCSSR*RCRAQP
Trigger: CGGCTGAGCGCGGCAGCGGCAGCGGGAGGAGCAAGT...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTTGGTCACTGTCCGCCTaGTCGCTGTCCCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCWSLSA*SLSPCP
Trigger: TGGGCACGGGGACAGCGATCAGGCGGACAGTGACCA...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp CAAATATGGGTTAATGTTTGGTGTAGCTTGGACTACTGCAAGGTCTTTTCGGGACCAGGGCGCGCACGGTaGTTACCAGGTACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: QIWVNVWCSLDYCKVFSGPGRAR*LPGTPG
Trigger: GCCTGGGGTACCTGGTAAGCACCGTGCGCGCCCTGG...TCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp AAGGTAACTTGTCTCATCCTCCTTTTTGCGTCTTTCCAATTTCTTCTCTCTCTCCGTCGCCGCGGGACTTaGCGTCCAGGGCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: KVTCLILLFASFQFLLSLRRRGT*RPGQRG
Trigger: GCCTCTTTGCCCTGGACGTCAAGTCCCGCGGCGACG...GAGAGAGAGAAGAAATTGGAAAGACGCAAAAAGGAGGATGAGACAAGTTACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp GTTGTTGTCGTCGTCGTTGTTCACCAATCACTTGGTACAGCGAAGAACCTTATGCCACGATCTCATAGGTaGGGCGCCCGCTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: VVVVVVVHQSLGTAKNLMPRSHR*GARSLQ
Trigger: TTGGAGAGAGCGGGCGCCTCACCTATGAGATCGTGG...CATAAGGTTCTTCGCTGTACCAAGTGATTGGTGAACAACGACGACGACAACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp GTTGTTGTCGTCGTCGTTGTTCACCAATCACTTGGTACAGCGAAGAACCTTATGCATCCTTGCCGATGTTaGCAATCACCGTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: VVVVVVVHQSLGTAKNLMHPCRC*QSPCRP
Trigger: GGGCCGGCACGGTGATTGGCAACATCGGCAAGGATG...CATAAGGTTCTTCGCTGTACCAAGTGATTGGTGAACAACGACGACGACAACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp GTTGTTGTCGTCGTCGTTGTTCACCAATCACTTGGTACAGCGAAGAACCTTATGAGAGTGTGGTGGTTCTaGAGCTCGCGGTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VVVVVVVHQSLGTAKNLMRVWWF*SSRSSA
Trigger: GGCACTGGACCGCGAGCTGCAGAACCACCACACTCT...CATAAGGTTCTTCGCTGTACCAAGTGATTGGTGAACAACGACGACGACAACAAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTGCTGAGGGGACCTCTTaGAGGAGAGGGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCAEGTS*RRGLRA
Trigger: TGCCCTGAGCCCTCTCCTCCAAGAGGTCCCCTCAGC...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp CAAATATGGGTTAATGTTTGGTGTAGCTTGGACTACTGCAAGGTCTTTTCGGGAGTCCAGCAGATGCGGTaGGGAGTTCTCCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: QIWVNVWCSLDYCKVFSGVQQMR*GVLQHP
Trigger: CGGGTGCTGGAGAACTCCGCACCGCATCTGCTGGAC...TCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp AAGGTAACTTGTCTCATCCTCCTTTTTGCGTCTTTCCAATTTCTTCTCTCTCTCAGCGTCTGGGTCGTGTaGGCTCGTGAGGGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: KVTCLILLFASFQFLLSLSVWVV*AREGEA
Trigger: CGCTTCCCCCTCACGAGCGCACACGACCCAGACGCT...GAGAGAGAGAAGAAATTGGAAAGACGCAAAAAGGAGGATGAGACAAGTTACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp AAGGTAACTTGTCTCATCCTCCTTTTTGCGTCTTTCCAATTTCTTCTCTCTCTCAGAAGGGGTGCAGCGTaGGGATCTCGCCGCTGGACG +
Preference number: 4 (lower is better)
Translates to: KVTCLILLFASFQFLLSLRRGAA*GSRRWT
Trigger: CGTCCAGCGGCGAGATCCGCACGCTGCACCCCTTCT...GAGAGAGAGAAGAAATTGGAAAGACGCAAAAAGGAGGATGAGACAAGTTACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp ACAGTTAAGTCAGCATCAATCTCGTGGGAGGACAGTCTTAGAGTGATCAGAAATCAGCCTGCGTGCCCCTaGGGGACAGTCAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: TVKSASISWEDSLRVIRNQPACP*GTVRLL
Trigger: CAACAACCTGACTGTCCCGCAGGGGCACGCAGGCTG...ATTTCTGATCACTCTAAGACTGTCCTCCCACGAGATTGATGCTGACTTAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTGACCACGGTACCCAGTaGAGCGTTCTCGGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCDHGTQ*SVLGQF
Trigger: GAACTGCCCGAGAACGCTCCACTGGGTACCGTGGTC...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp CAAATATGGGTTAATGTTTGGTGTAGCTTGGACTACTGCAAGGTCTTTTCGGGACTTGGTGGAGTTAAGTaGAGGGGAGCCCCCGTCCCG +
Preference number: 4 (lower is better)
Translates to: QIWVNVWCSLDYCKVFSGLGGVK*RGAPVP
Trigger: CGGGACGGGGGCTCCCCTCCACTTAACTCCACCAAG...TCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTCCGGTGAAGCTGGTGTaGCAGCCTGCGTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LGHMIHLTELTASSSTFTPVKLV*QPACPC
Trigger: GCAGGGGCACGCAGGCTGCCACACCAGCTTCACCGG...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGGGCCCAGATCCCTGTTaGGCTGCTCCAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SHCFLKGMILASQRLPWKGPDPC*AAPAAP
Trigger: TGGAGCAGCTGGAGCAGCCCAACAGGGATCTGGGCC...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp GTTGTTGTCGTCGTCGTTGTTCACCAATCACTTGGTACAGCGAAGAACCTTATGCGATCACCTTCACATTaGTCTGTACGGTGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: VVVVVVVHQSLGTAKNLMRSPSH*SVRWRS
Trigger: GCTCCGCCACCGTACAGATCAATGTGAAGGTGATCG...CATAAGGTTCTTCGCTGTACCAAGTGATTGGTGAACAACGACGACGACAACAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp GTTGTTGTCGTCGTCGTTGTTCACCAATCACTTGGTACAGCGAAGAACCTTATGAGTTCTCTTCAAGCTTaGAGGGGACGGAACCGGGAC +
Preference number: 4 (lower is better)
Translates to: VVVVVVVHQSLGTAKNLMSSLQA*RGRNRD
Trigger: GTCCCGGTTCCGTCCCCTTCAAGCTTGAAGAGAACT...CATAAGGTTCTTCGCTGTACCAAGTGATTGGTGAACAACGACGACGACAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp CAAATATGGGTTAATGTTTGGTGTAGCTTGGACTACTGCAAGGTCTTTTCGGGAAAGATACATCACCTCTaGCCGGGGCGAGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: QIWVNVWCSLDYCKVFSGKIHHL*PGRAEG
Trigger: CCCCTCAGCTCGCCCCGGTCAGAGGTGATGTATCTT...TCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTCAGCTCGCGGTCCAGTaGCTTTTGGATGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCQLAVQ*LLDDQL
Trigger: GAGCTGGTCATCCAAAAGGCACTGGACCGCGAGCTG...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp TGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAGCGTTGCTCTCCAAGTaGGCTGGCGCCCCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: CTIHYSHCFLKGMILASQALLSK*AGAPES
Trigger: GGACTCAGGGGCGCCAGCGCACTTGGAGAGCAACGC...TTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGCCCTCACCGTGGCGTTaGTCTCCAAGTGCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQPSPWR*SPSALA
Trigger: CGCCAGCGCACTTGGAGAGCAACGCCACGGTGAGGG...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp TGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAACCCCAGGCCAGCATTaGGCGGGACCTGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: CTIHYSHCFLKGMILASQTPGQH*AGPAAQ
Trigger: CTGAGCTGCAGGTCCCGCGCAATGCTGGCCTGGGGT...TTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTTCCTCCCAGAAGGGGTaGAGCGTGCGGATCTCGCCG +
Preference number: 4 (lower is better)
Translates to: LGHMIHLTELTASSSTFTSSQKG*SVRISP
Trigger: CGGCGAGATCCGCACGCTGCACCCCTTCTGGGAGGA...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTATGTCCCAGTGGTGCTaGTCGCCATTCACTCGCGGT +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCMSQWC*SPFTRG
Trigger: ACCGCGAGTGAATGGCGAGCAGCACCACTGGGACAT...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp GTTGTTGTCGTCGTCGTTGTTCACCAATCACTTGGTACAGCGAAGAACCTTATGGGCTGTACTCGGCGATaGGGCAGTTGTAAGTGCGAA +
Preference number: 4 (lower is better)
Translates to: VVVVVVVHQSLGTAKNLMGCTRR*GSCKCE
Trigger: TTCGCACTTACAACTGCCGCATCGCCGAGTACAGCC...CATAAGGTTCTTCGCTGTACCAAGTGATTGGTGAACAACGACGACGACAACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTAGGCGCAAGGCTCAATaGATGCCTTGGTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCRRKAQ*MPWLGC
Trigger: GCAGCCCAACCAAGGCATGCATTGAGCCTTGCGCCT...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp GTTGTTGTCGTCGTCGTTGTTCACCAATCACTTGGTACAGCGAAGAACCTTATGCTACGGGCTCTGGAATaGACATCCGCGAAGACCCTT +
Preference number: 4 (lower is better)
Translates to: VVVVVVVHQSLGTAKNLMLRALE*TSAKTL
Trigger: AAGGGTCTTCGCGGATGTGCATTCCAGAGCCCGTAG...CATAAGGTTCTTCGCTGTACCAAGTGATTGGTGAACAACGACGACGACAACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTCCAGCTCTGGGAACTTaGTGCCGTCGCCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: LGHMIHLTELTASSSTFTPALGT*CRRRGT
Trigger: AGTCCCGCGGCGACGGCACCAAGTTCCCAGAGCTGG...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp AAGGTAACTTGTCTCATCCTCCTTTTTGCGTCTTTCCAATTTCTTCTCTCTCTCTCACTCAGCGCCCCCTaGCGCACGGAGACGAAACCA +
Preference number: 4 (lower is better)
Translates to: KVTCLILLFASFQFLLSLSLSAP*RTETKP
Trigger: TGGTTTCGTCTCCGTGCGCCAGGGGGCGCTGAGTGA...GAGAGAGAGAAGAAATTGGAAAGACGCAAAAAGGAGGATGAGACAAGTTACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGCCCAGGTCGGGATCCTaGGCTAGCACTGACCCGAGG +
Preference number: 4 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQPRSGS*ASTDPR
Trigger: CCTCGGGTCAGTGCTAGCCCAGGATCCCGACCTGGG...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTCAGTTCCACCAAGTATaGCGGAGCCTCGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCQFHQV*RSLEDW
Trigger: CCAGTCTTCGAGGCTCCGTCATACTTGGTGGAACTG...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTGGTAACTGCCAGACTTaGTCCTCCCGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LGHMIHLTELTASSSTFTGNCQT*SSRCRC
Trigger: GCAGCGGCAGCGGGAGGAGCAAGTCTGGCAGTTACC...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp ACAGTTAAGTCAGCATCAATCTCGTGGGAGGACAGTCTTAGAGTGATCAGAAATGACATGTCCCAGTGGTaGTGCTCGCCATTCACTCGC +
Preference number: 4 (lower is better)
Translates to: TVKSASISWEDSLRVIRNDMSQW*CSPFTR
Trigger: GCGAGTGAATGGCGAGCAGCACCACTGGGACATGTC...ATTTCTGATCACTCTAAGACTGTCCTCCCACGAGATTGATGCTGACTTAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp ACAGTTAAGTCAGCATCAATCTCGTGGGAGGACAGTCTTAGAGTGATCAGAAATGGTCGATGCGCTGTTTaGTGTAGAGGAGCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: TVKSASISWEDSLRVIRNGRCAV*CRGARC
Trigger: ACAGCGGGCTCCTCTACACCAAACAGCGCATCGACC...ATTTCTGATCACTCTAAGACTGTCCTCCCACGAGATTGATGCTGACTTAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTTGCGGATCTCGCCGCTaGACGGATCGATCTCAAACA +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCCGSRR*TDRSQT
Trigger: TGTTTGAGATCGATCCGTCCAGCGGCGAGATCCGCA...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp ACAGTTAAGTCAGCATCAATCTCGTGGGAGGACAGTCTTAGAGTGATCAGAAATCCACAGCGGAAAGGGTaGGCTTGCCATGATCGGTCA +
Preference number: 4 (lower is better)
Translates to: TVKSASISWEDSLRVIRNPQRKG*ACHDRS
Trigger: TGACCGATCATGGCAAGCCCACCCTTTCCGCTGTGG...ATTTCTGATCACTCTAAGACTGTCCTCCCACGAGATTGATGCTGACTTAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp ACAGTTAAGTCAGCATCAATCTCGTGGGAGGACAGTCTTAGAGTGATCAGAAATCCAGTGCCTTTTGGATaGCCAGCTCTGGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: TVKSASISWEDSLRVIRNPVPFG*PALGTW
Trigger: CCAAGTTCCCAGAGCTGGTCATCCAAAAGGCACTGG...ATTTCTGATCACTCTAAGACTGTCCTCCCACGAGATTGATGCTGACTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGTGGGCTGCTAGATGCTaGGGGGACCTCTTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQWAARC*GDLLEE
Trigger: CTCCTCCAAGAGGTCCCCTCAGCATCTAGCAGCCCA...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGCAGGGAGCCTTTTGTTaGGGCGCAAGGCTCAATGCA +
Preference number: 4 (lower is better)
Translates to: SHCFLKGMILASQRLPWKQGAFC*GARLNA
Trigger: TGCATTGAGCCTTGCGCCTCAACAAAAGGCTCCCTG...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp TGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAATCCACGTCCAGCAGATaGGGTGCGGAGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CTIHYSHCFLKGMILASQSTSSR*GAEFSS
Trigger: GCTGGAGAACTCCGCACCGCATCTGCTGGACGTGGA...TTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTAGGACTCACGGTCGATaGGCTGTTTGGTGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCRTHGR*AVWCRG
Trigger: TCCTCTACACCAAACAGCGCATCGACCGTGAGTCCT...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp GTTGTTGTCGTCGTCGTTGTTCACCAATCACTTGGTACAGCGAAGAACCTTATGCGTCGATCTCCAACATaGCGTTCTCCTCATAGTCCA +
Preference number: 4 (lower is better)
Translates to: VVVVVVVHQSLGTAKNLMRRSPT*RSPHSP
Trigger: TGGACTATGAGGAGAACGGCATGTTGGAGATCGACG...CATAAGGTTCTTCGCTGTACCAAGTGATTGGTGAACAACGACGACGACAACAAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp GTTGTTGTCGTCGTCGTTGTTCACCAATCACTTGGTACAGCGAAGAACCTTATGACAGGTGGTCATCGTTaGCATCCACGATCTCATAGG +
Preference number: 4 (lower is better)
Translates to: VVVVVVVHQSLGTAKNLMTGGHR*HPRSHR
Trigger: CCTATGAGATCGTGGATGGCAACGATGACCACCTGT...CATAAGGTTCTTCGCTGTACCAAGTGATTGGTGAACAACGACGACGACAACAAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGCGGAAAGGGTGGGCTTaGCATGATCGGTCACCTTCA +
Preference number: 4 (lower is better)
Translates to: SHCFLKGMILASQRLPWKRKGWA*HDRSPS
Trigger: TGAAGGTGACCGATCATGGCAAGCCCACCCTTTCCG...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp ACAGTTAAGTCAGCATCAATCTCGTGGGAGGACAGTCTTAGAGTGATCAGAAATAGATCCCTGTTGGGCTaGTCCAGCTGCTCCAACACA +
Preference number: 4 (lower is better)
Translates to: TVKSASISWEDSLRVIRNRSLLG*SSCSNT
Trigger: TGTGTTGGAGCAGCTGGAGCAGCCCAACAGGGATCT...ATTTCTGATCACTCTAAGACTGTCCTCCCACGAGATTGATGCTGACTTAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp ACAGTTAAGTCAGCATCAATCTCGTGGGAGGACAGTCTTAGAGTGATCAGAAATTGGCACTTGGCATTGTaGCGGCATAAGGACTCACGG +
Preference number: 4 (lower is better)
Translates to: TVKSASISWEDSLRVIRNWHLAL*RHKDSR
Trigger: CCGTGAGTCCTTATGCCGCCACAATGCCAAGTGCCA...ATTTCTGATCACTCTAAGACTGTCCTCCCACGAGATTGATGCTGACTTAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp AAGGTAACTTGTCTCATCCTCCTTTTTGCGTCTTTCCAATTTCTTCTCTCTCTCGGGAGAGCTGGCACTTaGCATTGTGGCGGCATAAGG +
Preference number: 4 (lower is better)
Translates to: KVTCLILLFASFQFLLSLGRAGT*HCGGIR
Trigger: CCTTATGCCGCCACAATGCCAAGTGCCAGCTCTCCC...GAGAGAGAGAAGAAATTGGAAAGACGCAAAAAGGAGGATGAGACAAGTTACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp AAGGTAACTTGTCTCATCCTCCTTTTTGCGTCTTTCCAATTTCTTCTCTCTCTCACCTCTAGGGAGAGCTaGCACTTGGCATTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: KVTCLILLFASFQFLLSLTSRES*HLALWR
Trigger: CCGCCACAATGCCAAGTGCCAGCTCTCCCTAGAGGT...GAGAGAGAGAAGAAATTGGAAAGACGCAAAAAGGAGGATGAGACAAGTTACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp ACAGTTAAGTCAGCATCAATCTCGTGGGAGGACAGTCTTAGAGTGATCAGAAATCGGTCCAGTGCCTTTTaGATGACCAGCTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: TVKSASISWEDSLRVIRNRSSAF*MTSSGN
Trigger: GTTCCCAGAGCTGGTCATCCAAAAGGCACTGGACCG...ATTTCTGATCACTCTAAGACTGTCCTCCCACGAGATTGATGCTGACTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTTTATGGACATCCGAGTaGCAGGGGTCTCGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCLWTSE*QGSRSN
Trigger: ATTCGAGCGAGACCCCTGCCACTCGGATGTCCATAA...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTGGCTGCAGGGAACTGTaGCATCCAACACCTATCAGA +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCGCREL*HPTPIR
Trigger: TCTGATAGGTGTTGGATGCCACAGTTCCCTGCAGCC...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp GTTGTTGTCGTCGTCGTTGTTCACCAATCACTTGGTACAGCGAAGAACCTTATGCATTTTCAGCCTGATTaGCTGCAGGGAACTGTGGCA +
Preference number: 4 (lower is better)
Translates to: VVVVVVVHQSLGTAKNLMHFQPD*LQGTVA
Trigger: TGCCACAGTTCCCTGCAGCCAATCAGGCTGAAAATG...CATAAGGTTCTTCGCTGTACCAAGTGATTGGTGAACAACGACGACGACAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGCTGCCCATTCTTGCCTaGGTCCCGGTCAGTGACCCG +
Preference number: 4 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKLPILA*VPVSDP
Trigger: CGGGTCACTGACCGGGACTCAGGCAAGAATGGGCAG...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGAGGGTGGGCTTGCCATaGTCGGTCACCTTCACCACA +
Preference number: 4 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQRVGLP*SVTFTT
Trigger: TGTGGTGAAGGTGACCGATCATGGCAAGCCCACCCT...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGTGCTCACCACGTTCATaGCGTTCATGGCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SHCFLKGMILASQRLPWKCSPRS*RSWRSS
Trigger: AGAGGAACGCCATGAACGTCATGAACGTGGTGAGCA...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTAACGTGGAGCTACTTTaGACAAACTGCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCNVELL*TNCCLL
Trigger: CAGCAGGCAGCAGTTTGTTCAAAGTAGCTCCACGTT...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTTGGTTGCTTACTGGGTaGAGGGTACTGACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCWLLTG*RVLTVS
Trigger: ACTGACAGTCAGTACCCTTCACCCAGTAAGCAACCA...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGCCAGCACCCGGTAACTaGCAGACTTGCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKPAPGN*QTCSSR
Trigger: GCGGGAGGAGCAAGTCTGGCAGTTACCGGGTGCTGG...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTGCATTGCGCGGGACCTaGAGCTCAGCTGTGTCATTC +
Preference number: 4 (lower is better)
Translates to: LGHMIHLTELTASSSTFTALRGT*SSAVSF
Trigger: GAATGACACAGCTGAGCTGCAGGTCCCGCGCAATGC...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTTCCTCCACCTCGCTCTaGACCAGCATGATATCGTTT +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCSSTSL*TSMISF
Trigger: AAACGATATCATGCTGGTGCAGAGCGAGGTGGAGGA...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp CAAATATGGGTTAATGTTTGGTGTAGCTTGGACTACTGCAAGGTCTTTTCGGGAACTGTGACCTTGCAGTaGGCTGGGATTGGGTTAGGT +
Preference number: 4 (lower is better)
Translates to: QIWVNVWCSLDYCKVFSGTVTLQ*AGIGLG
Trigger: ACCTAACCCAATCCCAGCCCACTGCAAGGTCACAGT...TCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTTGTCTCACGGTCCAGTaGACGGTCAGTCACCACGGT +
Preference number: 4 (lower is better)
Translates to: LGHMIHLTELTASSSTFTCLTVQ*TVSHHG
Trigger: ACCGTGGTGACTGACCGTCCACTGGACCGTGAGACA...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGCGTCCCGGGCCACAATaGTCACATTGTACTCGTCTT +
Preference number: 4 (lower is better)
Translates to: SHCFLKGMILASQRLPWKRPGPQ*SHCTRL
Trigger: AAGACGAGTACAATGTGACCATTGTGGCCCGGGACG...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGGGGAAGCACAATCACTaGAGCGTTGTCGTTCACGTC +
Preference number: 4 (lower is better)
Translates to: SHCFLKGMILASQRLPWKGKHNH*SVVVHV
Trigger: GACGTGAACGACAACGCTCCAGTGATTGTGCTTCCC...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp AAGGTAACTTGTCTCATCCTCCTTTTTGCGTCTTTCCAATTTCTTCTCTCTCTCGGTACTGACTGTCAGTaGGCAGGTAGGAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KVTCLILLFASFQFLLSLGTDCQ*AGRSCL
Trigger: CAAGCAGCTCCTACCTGCCCACTGACAGTCAGTACC...GAGAGAGAGAAGAAATTGGAAAGACGCAAAAAGGAGGATGAGACAAGTTACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGCATGATCATCGCGGGTaGGCAGATAGGTGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKHDHRG*ADRCGA
Trigger: GGCTCCGCACCTATCTGCTCACCCGCGATGATCATG...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGTGTTGCCAATCACCGTaGCGGCCCCTTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKCCQSP*RPLAPL
Trigger: CAGAGGAGCAAGGGGCCGGCACGGTGATTGGCAACA...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTTTTCCCCGGCAGTCCTaGAAGAGCTTATCAATCTCT +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCFPRQS*KSLSIS
Trigger: AGAGATTGATAAGCTCTTGCAGGACTGCCGGGGAAA...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGAGAGGACTTCTCCGTTaGGACCTTCATCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: SHCFLKGMILASQRLPWKRGLLR*DLHQHQ
Trigger: CTGATGCTGATGAAGGTCCCAACGGAGAAGTCCTCT...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGCGGAGACGAAACCAATaGACGGCGCGTTATCGTTCC +
Preference number: 4 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQRRRNQ*TARYRS
Trigger: GGAACGATAACGCGCCGTCCATTGGTTTCGTCTCCG...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp CAAATATGGGTTAATGTTTGGTGTAGCTTGGACTACTGCAAGGTCTTTTCGGGATGTCTGTCTGAATTATaGACATCCGAGTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QIWVNVWCSLDYCKVFSGCLSEL*TSEWQG
Trigger: CCCCTGCCACTCGGATGTCCATAATTCAGACAGACA...TCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTTGCTGCCCATGTAATTaGGCTCTGCGGGAAAATTGT +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCCCPCN*ALRENC
Trigger: ACAATTTTCCCGCAGAGCCCAATTACATGGGCAGCA...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp AAGGTAACTTGTCTCATCCTCCTTTTTGCGTCTTTCCAATTTCTTCTCTCTCTCCAGGCTGGCTCTTTCTaGGTCCTTAAACGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: KVTCLILLFASFQFLLSLQAGSF*VLKRGA
Trigger: AGCTCCACGTTTAAGGACCCAGAAAGAGCCAGCCTG...GAGAGAGAGAAGAAATTGGAAAGACGCAAAAAGGAGGATGAGACAAGTTACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR CAA 72 bp CCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTaGGAAGCCAAGCACCAGAGTTCTGTGTTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: PQRYDFGITKAS*EAKHQSSVLKA
Trigger: TGCCTTTAACACAGAACTCTGGTGCTTGGCTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp TGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGGAGCGTTGTCGTTaGTGTCCTGGATCTCTACCT +
Preference number: 4 (lower is better)
Translates to: CTIHYSHCFLKGMILASQRERCR*CPGSLP
Trigger: AGGTAGAGATCCAGGACATCAACGACAACGCTCCCT...TTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGATGTCCATTTCTATCTaGTCCGAGGGGAAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: SHCFLKGMILASQRLPWKMSISI*SEGKEG
Trigger: TCCCTCTTTCCCCTCGGATCAGATAGAAATGGACAT...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp CAAATATGGGTTAATGTTTGGTGTAGCTTGGACTACTGCAAGGTCTTTTCGGGATCTGATCAGAAGCCATaGAGGAAGGGTCTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: QIWVNVWCSLDYCKVFSGSDQKP*RKGLLV
Trigger: AACCAAGAGACCCTTCCTTCATGGCTTCTGATCAGA...TCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGTGCGGCAGTTGTAAGTaGGAATCTCCTTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: SHCFLKGMILASQRLPWKCGSCK*ESPCFP
Trigger: GGGAAAACAAGGAGATTCGCACTTACAACTGCCGCA...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp TGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAGCAAGGCTCAATGCATaGCTTGGTTGGGCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: CTIHYSHCFLKGMILASQARLNA*LGWAAR
Trigger: TCTAGCAGCCCAACCAAGGCATGCATTGAGCCTTGC...TTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGTTGGATGACCAGCTCTaGGAACTTGGTGCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKLDDQL*ELGAVA
Trigger: GGCGACGGCACCAAGTTCCCAGAGCTGGTCATCCAA...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGCCCGAGGTATTCTCCTaGAATGTTGTTCTCGTGTAC +
Preference number: 4 (lower is better)
Translates to: SHCFLKGMILASQRLPWKPEVFS*NVVLVY
Trigger: GTACACGAGAACAACATTCCAGGAGAATACCTCGGG...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGGACACTGTCCCATTTTaGCCCAGGTCGGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKDTVPF*PRSGSW
Trigger: CCAGGATCCCGACCTGGGCCAAAATGGGACAGTGTC...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGCTCTTGGTTGCTTACTaGGTGAAGGGTACTGACTGT +
Preference number: 4 (lower is better)
Translates to: SHCFLKGMILASQRLPWKLLVAY*VKGTDC
Trigger: ACAGTCAGTACCCTTCACCCAGTAAGCAACCAAGAG...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR CAA 72 bp ACCACTAGTGACAGCTTAGAGTCAATCCATCACATGTaGGCACAACCAGTTCTGAGACTTGTATGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: TTSDSLESIHHM*AQPVLRLVWCF
Trigger: GAAACACCATACAAGTCTCAGAACTGGTTGTGCCAACATGTGATGGATTGACTCTAAGCTGTCACTAGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGCCTGGATCTCTACCTTaGTCATGCAAATCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SHCFLKGMILASQRLPWKPGSLP*SCKSPC
Trigger: ACAAGGAGATTTGCATGATCAAGGTAGAGATCCAGG...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGCGGGCACATAGCTGCTaGAGGAGTAGAGGACTTCTC +
Preference number: 4 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKRAHSC*RSRGLL
Trigger: GAGAAGTCCTCTACTCCTTCAGCAGCTATGTGCCCG...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp AAGGTAACTTGTCTCATCCTCCTTTTTGCGTCTTTCCAATTTCTTCTCTCTCTCAGGAAGAATGGAGTATaGCACTGTCCCATTTTGGCC +
Preference number: 4 (lower is better)
Translates to: KVTCLILLFASFQFLLSLRKNGV*HCPILA
Trigger: GGCCAAAATGGGACAGTGTCATACTCCATTCTTCCT...GAGAGAGAGAAGAAATTGGAAAGACGCAAAAAGGAGGATGAGACAAGTTACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp TGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAATCTGCATTTTCAGCCTaGTTGGCTGCAGGGAACTGT +
Preference number: 4 (lower is better)
Translates to: CTIHYSHCFLKGMILASQSAFSA*LAAGNC
Trigger: ACAGTTCCCTGCAGCCAATCAGGCTGAAAATGCAGA...TTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp CAAATATGGGTTAATGTTTGGTGTAGCTTGGACTACTGCAAGGTCTTTTCGGGACATGTAATTGGGCTCTaGGGGAAAATTGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: QIWVNVWCSLDYCKVFSGHVIGL*GKIVCL
Trigger: CAGACAGACAATTTTCCCGCAGAGCCCAATTACATG...TCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGGAACAAACTGCTGCCTaGTGCCCATGTAATTGGGCT +
Preference number: 4 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQEQTAA*CPCNWA
Trigger: AGCCCAATTACATGGGCAGCAGGCAGCAGTTTGTTC...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp TGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAGAAGGGTCTCTTGGTTaGTTACTGGGTGAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: CTIHYSHCFLKGMILASQEGSLG*LLGEGY
Trigger: GTACCCTTCACCCAGTAAGCAACCAAGAGACCCTTC...TTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTATCCGCGAAGACCCTTaGCATCTGATCAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LGHMIHLTELTASSSTFTIREDP*HLIRSH
Trigger: ATGGCTTCTGATCAGATGGCAAGGGTCTTCGCGGAT...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTCGGAGCCTCGAAGACTaGACTGTTGTCATTGGAATC +
Preference number: 4 (lower is better)
Translates to: LGHMIHLTELTASSSTFTRSLED*TVVIGI
Trigger: GATTCCAATGACAACAGTCCAGTCTTCGAGGCTCCG...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTTCGATCTCAAACAGGTaGTCATCGTTGCCATCCACG +
Preference number: 4 (lower is better)
Translates to: LGHMIHLTELTASSSTFTSISNR*SSLPST
Trigger: CGTGGATGGCAACGATGACCACCTGTTTGAGATCGA...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGCACAAGCTCCACCACTaGGGTCACATCCTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKHKLHH*GHILPE
Trigger: TTCTGGGAGGATGTGACCCCAGTGGTGGAGCTTGTG...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGGGGTGCCGCGTTCTCTaGGATGTCCATTTCTATCTG +
Preference number: 4 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKGCRVL*DVHFYL
Trigger: CAGATAGAAATGGACATCTCAGAGAACGCGGCACCC...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGCAACACCTATCAGAATaGCCAAGCACTCGGCATTCA +
Preference number: 4 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQQHLSE*PSTRHS
Trigger: TGAATGCCGAGTGCTTGGTCATTCTGATAGGTGTTG...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTAAGACCCTTGCCATCTaGTCAGAAGCCATGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LGHMIHLTELTASSSTFTKTLAI*SEAMKE
Trigger: TTCCTTCATGGCTTCTGATCAGATGGCAAGGGTCTT...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp CAAATATGGGTTAATGTTTGGTGTAGCTTGGACTACTGCAAGGTCTTTTCGGGATGTGTGAAGGAAGAATaGAGTATGACACTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: QIWVNVWCSLDYCKVFSGCVKEE*SMTLSH
Trigger: ATGGGACAGTGTCATACTCCATTCTTCCTTCACACA...TCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTAAGTCTTTTTCCCAGTaGGATTCACAGTTTCGTAAG +
Preference number: 4 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCKSFSQ*DSQFRK
Trigger: CTTACGAAACTGTGAATCCCACTGGGAAAAAGACTT...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR CAA 72 bp ATGAGTAGGCATATAGTATGCCAGTCCTTAGTCTATTaGATGACCCCAGCAGATTCCACTCCATTATTCAAC +
Preference number: 4 (lower is better)
Translates to: MSRHIVCQSLVY*MTPADSTPLFN
Trigger: GTTGAATAATGGAGTGGAATCTGCTGGGGTCATCAAATAGACTAAGGACTGGCATACTATATGCCTACTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp AAGGTAACTTGTCTCATCCTCCTTTTTGCGTCTTTCCAATTTCTTCTCTCTCTCTCTTGTTCGAGTGGCTaGCTTTTAGTTGAAGTAGTT +
Preference number: 4 (lower is better)
Translates to: KVTCLILLFASFQFLLSLSCSSG*LLVEVV
Trigger: AACTACTTCAACTAAAAGTCAGCCACTCGAACAAGA...GAGAGAGAGAAGAAATTGGAAAGACGCAAAAAGGAGGATGAGACAAGTTACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGATTTGTGCGGTAATCTaGATTTTCAGCCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQICAVI*IFSLIG
Trigger: GCCAATCAGGCTGAAAATGCAGATTACCGCACAAAT...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGGCAATGAGAATAGTGTaGTCTCGCTTGTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQAMRIV*SRLSFP
Trigger: TGGAAAAGACAAGCGAGAGCACACTATTCTCATTGC...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CCA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGCAGGTTGTTGGAGGCTaGCTTAAGATACATCACCTC +
Preference number: 4 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKQVVGG*LKIHHL
Trigger: GAGGTGATGTATCTTAAGCCAGCCTCCAACAACCTG...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR CAA 72 bp TGTTTACCACAAATATGGGTTAATGTTTGGTGTAGCTaGGACTACTGCAAGGTCTTTTCGGGACTTTCAGTA +
Preference number: 4 (lower is better)
Translates to: CLPQIWVNVWCS*DYCKVFSGLSV
Trigger: TACTGAAAGTCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTGTGGTAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR CAA 72 bp GATAAATCCATACAATGTATGCTGCTTTTGTTGTTGTaGTCGTCGTCGTTGTTCACCAATCACTTGGTACAG +
Preference number: 4 (lower is better)
Translates to: DKSIQCMLLLLL*SSSLFTNHLVQ
Trigger: CTGTACCAAGTGATTGGTGAACAACGACGACGACAACAACAACAAAAGCAGCATACATTGTATGGATTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR GCA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGAGTTTTCATCTTGAGTaGCTCCCTAACCGACATGTC +
Preference number: 4 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKSFHLE*LPNRHV
Trigger: GACATGTCGGTTAGGGAGGCACTCAAGATGAAAACT...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
3UTR CAA 72 bp CAGGTCTCATTCAATTATGTTTCAAATCAACACATCTaGATAGCCAAAACTCCGATGGAATTAATGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QVSFNYVSNQHI*IAKTPMELMLW
Trigger: CCAGAGCATTAATTCCATCGGAGTTTTGGCTATCAAGATGTGTTGATTTGAAACATAATTGAATGAGACCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR TCA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGTGGCTGACTTTTAGTTaGAGTAGTTTTCATCTTGAG +
Preference number: 4 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKWLTFS*SSFHLE
Trigger: CTCAAGATGAAAACTACTTCAACTAAAAGTCAGCCA...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp CTCCTCCCGCTGCCGCTGCCGCGCTCAGCCGGCGGAAGCCCGGGCTaGAGTCGGGCATCCTTGCCGATGTTGCCAATCACCGTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: LLPLPLPRSAGGSPG*SRASLPMLPITVPA
Trigger: GGCCGGCACGGTGATTGGCAACATCGGCAAGGATGCCCGACTGCAGCCCGGGCTTCCGCCGGCTGAGCGCGGCAGCGGCAGCGGGAGGAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp CGGAGTTCTCCAGCACCCGGTAACTGCCAGACTTGCTCCTCCCGCTaGCGCTGCCGCGCTCAGCCGGCGGAAGCCCGGGCTGCAGTCGGG +
Preference number: 5 (lower is better)
Translates to: RSSPAPGNCQTCSSR*RCRAQPAEARAAVG
Trigger: CCCGACTGCAGCCCGGGCTTCCGCCGGCTGAGCGCGGCAGCGGCAGCGGGAGGAGCAAGTCTGGCAGTTACCGGGTGCTGGAGAACTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp TCTCCAGCACCCGGTAACTGCCAGACTTGCTCCTCCCGCTGCCGCTaGCGCGCTCAGCCGGCGGAAGCCCGGGCTGCAGTCGGGCATCCT +
Preference number: 5 (lower is better)
Translates to: SPAPGNCQTCSSRCR*RAQPAEARAAVGHP
Trigger: AGGATGCCCGACTGCAGCCCGGGCTTCCGCCGGCTGAGCGCGGCAGCGGCAGCGGGAGGAGCAAGTCTGGCAGTTACCGGGTGCTGGAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp GCAGATGCGGTGCGGAGTTCTCCAGCACCCGGTAACTGCCAGACTTaGTCCTCCCGCTGCCGCTGCCGCGCTCAGCCGGCGGAAGCCCGG +
Preference number: 5 (lower is better)
Translates to: ADAVRSSPAPGNCQT*SSRCRCRAQPAEAR
Trigger: CCGGGCTTCCGCCGGCTGAGCGCGGCAGCGGCAGCGGGAGGAGCAAGTCTGGCAGTTACCGGGTGCTGGAGAACTCCGCACCGCATCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 90 bp ATCGCGGGTGAGCAGATAGGTGCGGAGCCCGTTCTCGCCAGCGTCTaGGTCGTGTGCGCTCGTGAGGGGGAAGCGGGTGCCGGGTGCCGC +
Preference number: 5 (lower is better)
Translates to: IAGEQIGAEPVLASV*VVCAREGEAGAGCR
Trigger: GCGGCACCCGGCACCCGCTTCCCCCTCACGAGCGCACACGACCCAGACGCTGGCGAGAACGGGCTCCGCACCTATCTGCTCACCCGCGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp TGCCGCGCTCAGCCGGCGGAAGCCCGGGCTGCAGTCGGGCATCCTTaGCGATGTTGCCAATCACCGTGCCGGCCCCTTGCTCCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: CRAQPAEARAAVGHP*RCCQSPCRPLAPLA
Trigger: TGCCAGAGGAGCAAGGGGCCGGCACGGTGATTGGCAACATCGGCAAGGATGCCCGACTGCAGCCCGGGCTTCCGCCGGCTGAGCGCGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 90 bp AGGGCGATGACTGTGCCGGGCGGGGCGGCCTCACTCAGCGCCCCCTaGCGCACGGAGACGAAACCAATGGACGGCGCGTTATCGTTCCGG +
Preference number: 5 (lower is better)
Translates to: RAMTVPGGAASLSAP*RTETKPMDGALSFR
Trigger: CCGGAACGATAACGCGCCGTCCATTGGTTTCGTCTCCGTGCGCCAGGGGGCGCTGAGTGAGGCCGCCCCGCCCGGCACAGTCATCGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp GGTGTAGAGGAGCCCGCTGTCGGCGTCCACGTCCAGCAGATGCGGTaGGGAGTTCTCCAGCACCCGGTAACTGCCAGACTTGCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: GVEEPAVGVHVQQMR*GVLQHPVTARLAPP
Trigger: GGGAGGAGCAAGTCTGGCAGTTACCGGGTGCTGGAGAACTCCGCACCGCATCTGCTGGACGTGGACGCCGACAGCGGGCTCCTCTACACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp GCATCCACGGACTCTCGGCCCAGATCCCTGTTGGGCTGCTCCAGCTaGTCCAACACAGCTCCCATCTCGCTGGAAGCCCTACGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: ASTDSRPRSLLGCSS*SNTAPISLEALRAL
Trigger: CAGAGCCCGTAGGGCTTCCAGCGAGATGGGAGCTGTGTTGGAGCAGCTGGAGCAGCCCAACAGGGATCTGGGCCGAGAGTCCGTGGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 90 bp GAGCGTGGAGGCTCCCCGCCATCTAGGGCGGTCAGCACCAGAGTGTaGTGGTTCTGCAGCTCGCGGTCCAGTGCCTTTTGGATGACCAGC +
Preference number: 5 (lower is better)
Translates to: ERGGSPPSRAVSTRV*WFCSSRSSAFWMTS
Trigger: GCTGGTCATCCAAAAGGCACTGGACCGCGAGCTGCAGAACCACCACACTCTGGTGCTGACCGCCCTAGATGGCGGGGAGCCTCCACGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp GGCTCCCCGCCATCTAGGGCGGTCAGCACCAGAGTGTGGTGGTTCTaGAGCTCGCGGTCCAGTGCCTTTTGGATGACCAGCTCTGGGAAC +
Preference number: 5 (lower is better)
Translates to: GSPPSRAVSTRVWWF*SSRSSAFWMTSSGN
Trigger: GTTCCCAGAGCTGGTCATCCAAAAGGCACTGGACCGCGAGCTGCAGAACCACCACACTCTGGTGCTGACCGCCCTAGATGGCGGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp TGTCCAGGGCGCGCACGGTGCTTACCAGGTACCCCAGGCCAGCATTaGGCGGGACCTGCAGCTCAGCTGTGTCATTCTGTAGCGTGGGAA +
Preference number: 5 (lower is better)
Translates to: CPGRARCLPGTPGQH*AGPAAQLCHSVAWE
Trigger: TTCCCACGCTACAGAATGACACAGCTGAGCTGCAGGTCCCGCGCAATGCTGGCCTGGGGTACCTGGTAAGCACCGTGCGCGCCCTGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 90 bp CGTGGAGGCTCCCCGCCATCTAGGGCGGTCAGCACCAGAGTGTGGTaGTTCTGCAGCTCGCGGTCCAGTGCCTTTTGGATGACCAGCTCT +
Preference number: 5 (lower is better)
Translates to: RGGSPPSRAVSTRVW*FCSSRSSAFWMTSS
Trigger: AGAGCTGGTCATCCAAAAGGCACTGGACCGCGAGCTGCAGAACCACCACACTCTGGTGCTGACCGCCCTAGATGGCGGGGAGCCTCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 90 bp GCAGGGGTCTCGCTCGAATTAGTCCCTTGTCCGGTGAAGCTGGTGTaGCAGCCTGCGTGCCCCTGCGGGACAGTCAGGTTGTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: AGVSLELVPCPVKLV*QPACPCGTVRLLEA
Trigger: AGCCTCCAACAACCTGACTGTCCCGCAGGGGCACGCAGGCTGCCACACCAGCTTCACCGGACAAGGGACTAATTCGAGCGAGACCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 90 bp CTCGCCATTCACTCGCGGTACCCCTTCAGGCAGGGAGCCGCTCACTaGGCGGATGATAAGTTTGGCCACAGCGGAAAGGGTGGGCTTGCC +
Preference number: 5 (lower is better)
Translates to: LAIHSRYPFRQGAAH*ADDKFGHSGKGGLA
Trigger: GGCAAGCCCACCCTTTCCGCTGTGGCCAAACTTATCATCCGCTCAGTGAGCGGCTCCCTGCCTGAAGGGGTACCGCGAGTGAATGGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 90 bp GTGTGCGCTCGTGAGGGGGAAGCGGGTGCCGGGTGCCGCGTTCTCTaGGATGTCCATTTCTATCTGATCCGAGGGGAAAGAGGGAGCGTT +
Preference number: 5 (lower is better)
Translates to: VCAREGEAGAGCRVL*DVHFYLIRGERGSV
Trigger: AACGCTCCCTCTTTCCCCTCGGATCAGATAGAAATGGACATCTCAGAGAACGCGGCACCCGGCACCCGCTTCCCCCTCACGAGCGCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 90 bp CGATCTCAAACAGGTGGTCATCGTTGCCATCCACGATCTCATAGGTaGGGCGCCCGCTCTCTCCAAAGTCGCTGTCCAGGGCGCGCACGG +
Preference number: 5 (lower is better)
Translates to: RSQTGGHRCHPRSHR*GARSLQSRCPGRAR
Trigger: CCGTGCGCGCCCTGGACAGCGACTTTGGAGAGAGCGGGCGCCTCACCTATGAGATCGTGGATGGCAACGATGACCACCTGTTTGAGATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp AGAGCTGGCACTTGGCATTGTGGCGGCATAAGGACTCACGGTCGATaGGCTGTTTGGTGTAGAGGAGCCCGCTGTCGGCGTCCACGTCCA +
Preference number: 5 (lower is better)
Translates to: RAGTWHCGGIRTHGR*AVWCRGARCRRPRP
Trigger: TGGACGTGGACGCCGACAGCGGGCTCCTCTACACCAAACAGCGCATCGACCGTGAGTCCTTATGCCGCCACAATGCCAAGTGCCAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp CAAGCTCCACCACTGGGGTCACATCCTCCCAGAAGGGGTGCAGCGTaGGGATCTCGCCGCTGGACGGATCGATCTCAAACAGGTGGTCAT +
Preference number: 5 (lower is better)
Translates to: QAPPLGSHPPRRGAA*GSRRWTDRSQTGGH
Trigger: ATGACCACCTGTTTGAGATCGATCCGTCCAGCGGCGAGATCCGCACGCTGCACCCCTTCTGGGAGGATGTGACCCCAGTGGTGGAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp TTCACCACAAGCTCCACCACTGGGGTCACATCCTCCCAGAAGGGGTaGAGCGTGCGGATCTCGCCGCTGGACGGATCGATCTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: FTTSSTTGVTSSQKG*SVRISPLDGSISNR
Trigger: CCTGTTTGAGATCGATCCGTCCAGCGGCGAGATCCGCACGCTGCACCCCTTCTGGGAGGATGTGACCCCAGTGGTGGAGCTTGTGGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp CTCGCTCGAATTAGTCCCTTGTCCGGTGAAGCTGGTGTGGCAGCCTaGGTGCCCCTGCGGGACAGTCAGGTTGTTGGAGGCTGGCTTAAG +
Preference number: 5 (lower is better)
Translates to: LARISPLSGEAGVAA*VPLRDSQVVGGWLK
Trigger: CTTAAGCCAGCCTCCAACAACCTGACTGTCCCGCAGGGGCACGCAGGCTGCCACACCAGCTTCACCGGACAAGGGACTAATTCGAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp ACTTCTTCGGCATCCACGGACTCTCGGCCCAGATCCCTGTTGGGCTaGTCCAGCTGCTCCAACACAGCTCCCATCTCGCTGGAAGCCCTA +
Preference number: 5 (lower is better)
Translates to: TSSASTDSRPRSLLG*SSCSNTAPISLEAL
Trigger: TAGGGCTTCCAGCGAGATGGGAGCTGTGTTGGAGCAGCTGGAGCAGCCCAACAGGGATCTGGGCCGAGAGTCCGTGGATGCCGAAGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 90 bp ACTTGGCATTGTGGCGGCATAAGGACTCACGGTCGATGCGCTGTTTaGTGTAGAGGAGCCCGCTGTCGGCGTCCACGTCCAGCAGATGCG +
Preference number: 5 (lower is better)
Translates to: TWHCGGIRTHGRCAV*CRGARCRRPRPADA
Trigger: CGCATCTGCTGGACGTGGACGCCGACAGCGGGCTCCTCTACACCAAACAGCGCATCGACCGTGAGTCCTTATGCCGCCACAATGCCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp CGCACGGTGCTTACCAGGTACCCCAGGCCAGCATTGCGCGGGACCTaGAGCTCAGCTGTGTCATTCTGTAGCGTGGGAAGCACAATCACT +
Preference number: 5 (lower is better)
Translates to: RTVLTRYPRPALRGT*SSAVSFCSVGSTIT
Trigger: AGTGATTGTGCTTCCCACGCTACAGAATGACACAGCTGAGCTGCAGGTCCCGCGCAATGCTGGCCTGGGGTACCTGGTAAGCACCGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 90 bp CGGGACAGTCAGGTTGTTGGAGGCTGGCTTAAGATACATCACCTCTaGCCGGGGCGAGCTGAGGGGCAGGCGGGTTTGGTAGTCGAAGTA +
Preference number: 5 (lower is better)
Translates to: RDSQVVGGWLKIHHL*PGRAEGQAGLVVEV
Trigger: TACTTCGACTACCAAACCCGCCTGCCCCTCAGCTCGCCCCGGTCAGAGGTGATGTATCTTAAGCCAGCCTCCAACAACCTGACTGTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp TTAGTCCCTTGTCCGGTGAAGCTGGTGTGGCAGCCTGCGTGCCCCTaGGGGACAGTCAGGTTGTTGGAGGCTGGCTTAAGATACATCACC +
Preference number: 5 (lower is better)
Translates to: LVPCPVKLVWQPACP*GTVRLLEAGLRYIT
Trigger: GGTGATGTATCTTAAGCCAGCCTCCAACAACCTGACTGTCCCGCAGGGGCACGCAGGCTGCCACACCAGCTTCACCGGACAAGGGACTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 90 bp GAAATCGTGCTCAGTGTCACTATGAGAGGCAGGGACATGTCCCAGTaGTGCTGCTCGCCATTCACTCGCGGTACCCCTTCAGGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: EIVLSVTMRGRDMSQ*CCSPFTRGTPSGRE
Trigger: CTCCCTGCCTGAAGGGGTACCGCGAGTGAATGGCGAGCAGCACCACTGGGACATGTCCCTGCCTCTCATAGTGACACTGAGCACGATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 90 bp GCTGCTCCAACACAGCTCCCATCTCGCTGGAAGCCCTACGGGCTCTaGAATGCACATCCGCGAAGACCCTTGCCATCTGATCAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: AAPTQLPSRWKPYGL*NAHPRRPLPSDQKP
Trigger: TGGCTTCTGATCAGATGGCAAGGGTCTTCGCGGATGTGCATTCCAGAGCCCGTAGGGCTTCCAGCGAGATGGGAGCTGTGTTGGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 90 bp GATCGATGGAGAAGAGCTCCCGCACGCGGTCGGGCACATAGCTGCTaGAGGAGTAGAGGACTTCTCCGTTGGGACCTTCATCAGCATCAG +
Preference number: 5 (lower is better)
Translates to: DRWRRAPARGRAHSC*RSRGLLRWDLHQHQ
Trigger: CTGATGCTGATGAAGGTCCCAACGGAGAAGTCCTCTACTCCTTCAGCAGCTATGTGCCCGACCGCGTGCGGGAGCTCTTCTCCATCGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 90 bp GAGCGGATGATAAGTTTGGCCACAGCGGAAAGGGTGGGCTTGCCATaGTCGGTCACCTTCACCACAAGCTCCACCACTGGGGTCACATCC +
Preference number: 5 (lower is better)
Translates to: ERMISLATAERVGLP*SVTFTTSSTTGVTS
Trigger: GGATGTGACCCCAGTGGTGGAGCTTGTGGTGAAGGTGACCGATCATGGCAAGCCCACCCTTTCCGCTGTGGCCAAACTTATCATCCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 90 bp CCTCGAAGACTGGACTGTTGTCATTGGAATCGATCACCTTCACATTaGTCTGTACGGTGGCGGAGCGTGGAGGCTCCCCGCCATCTAGGG +
Preference number: 5 (lower is better)
Translates to: PRRLDCCHWNRSPSH*SVRWRSVEAPRHLG
Trigger: CCCTAGATGGCGGGGAGCCTCCACGCTCCGCCACCGTACAGATCAATGTGAAGGTGATCGATTCCAATGACAACAGTCCAGTCTTCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 90 bp ATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCCGCCTaGTCGCTGTCCCCGTGCCCACTGTCTCTCAGGCTGGCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: MSQQEPLLVSWSLSA*SLSPCPLSLRLALS
Trigger: AGAAAGAGCCAGCCTGAGAGACAGTGGGCACGGGGACAGCGATCAGGCGGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 90 bp GACCACGGTACCCAGTGGAGCGTTCTCGGGCAGTTCCACCAAGTATaGCGGAGCCTCGAAGACTGGACTGTTGTCATTGGAATCGATCAC +
Preference number: 5 (lower is better)
Translates to: DHGTQWSVLGQFHQV*RSLEDWTVVIGIDH
Trigger: GTGATCGATTCCAATGACAACAGTCCAGTCTTCGAGGCTCCGTCATACTTGGTGGAACTGCCCGAGAACGCTCCACTGGGTACCGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 90 bp CGTCACCCTCACCGTGGCGTTGCTCTCCAAGTGCGCTGGCGCCCCTaGGTCCTTAGCCAGTACTTTGAATTCAAAAGCCTTCGTTTGTTC +
Preference number: 5 (lower is better)
Translates to: RHPHRGVALQVRWRP*VLSQYFEFKSLRLF
Trigger: GAACAAACGAAGGCTTTTGAATTCAAAGTACTGGCTAAGGACTCAGGGGCGCCAGCGCACTTGGAGAGCAACGCCACGGTGAGGGTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 90 bp GCCCTACGGGCTCTGGAATGCACATCCGCGAAGACCCTTGCCATCTaGTCAGAAGCCATGAAGGAAGGGTCTCTTGGTTGCTTACTGGGT +
Preference number: 5 (lower is better)
Translates to: ALRALECTSAKTLAI*SEAMKEGSLGCLLG
Trigger: ACCCAGTAAGCAACCAAGAGACCCTTCCTTCATGGCTTCTGATCAGATGGCAAGGGTCTTCGCGGATGTGCATTCCAGAGCCCGTAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp GCTTACTGGGTGAAGGGTACTGACTGTCAGTGGGCAGGTAGGAGCTaGTTGCTTCTGCTAAGGGCCCAGGTTTTGCTTCACAGCCATCCA +
Preference number: 5 (lower is better)
Translates to: AYWVKGTDCQWAGRS*LLLLRAQVLLHSHP
Trigger: TGGATGGCTGTGAAGCAAAACCTGGGCCCTTAGCAGAAGCAAGCAGCTCCTACCTGCCCACTGACAGTCAGTACCCTTCACCCAGTAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp GCTGGAAGCCCTACGGGCTCTGGAATGCACATCCGCGAAGACCCTTaGCATCTGATCAGAAGCCATGAAGGAAGGGTCTCTTGGTTGCTT +
Preference number: 5 (lower is better)
Translates to: AGSPTGSGMHIREDP*HLIRSHEGRVSWLL
Trigger: AAGCAACCAAGAGACCCTTCCTTCATGGCTTCTGATCAGATGGCAAGGGTCTTCGCGGATGTGCATTCCAGAGCCCGTAGGGCTTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 90 bp ATTCTCATCCAGAATCTTGACGGCGAAGGACTTGGTGGAGTTAAGTaGAGGGGAGCCCCCGTCCCGGGCCACAATGGTCACATTGTACTC +
Preference number: 5 (lower is better)
Translates to: ILIQNLDGEGLGGVK*RGAPVPGHNGHIVL
Trigger: GAGTACAATGTGACCATTGTGGCCCGGGACGGGGGCTCCCCTCCACTTAACTCCACCAAGTCCTTCGCCGTCAAGATTCTGGATGAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 90 bp CTGATCGCTGTCCCCGTGCCCACTGTCTCTCAGGCTGGCTCTTTCTaGGTCCTTAAACGTGGAGCTACTTTGAACAAACTGCTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: LIAVPVPTVSQAGSF*VLKRGATLNKLLPA
Trigger: AGCAGGCAGCAGTTTGTTCAAAGTAGCTCCACGTTTAAGGACCCAGAAAGAGCCAGCCTGAGAGACAGTGGGCACGGGGACAGCGATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 90 bp AAGGGTCTCTTGGTTGCTTACTGGGTGAAGGGTACTGACTGTCAGTaGGCAGGTAGGAGCTGCTTGCTTCTGCTAAGGGCCCAGGTTTTG +
Preference number: 5 (lower is better)
Translates to: KGLLVAYWVKGTDCQ*AGRSCLLLLRAQVL
Trigger: CAAAACCTGGGCCCTTAGCAGAAGCAAGCAGCTCCTACCTGCCCACTGACAGTCAGTACCCTTCACCCAGTAAGCAACCAAGAGACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 90 bp CTGATCAGAAGCCATGAAGGAAGGGTCTCTTGGTTGCTTACTGGGTaGAGGGTACTGACTGTCAGTGGGCAGGTAGGAGCTGCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: LIRSHEGRVSWLLTG*RVLTVSGQVGAACF
Trigger: GAAGCAAGCAGCTCCTACCTGCCCACTGACAGTCAGTACCCTTCACCCAGTAAGCAACCAAGAGACCCTTCCTTCATGGCTTCTGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp TTCACGTCTAAAACCGTCACCCTCACCGTGGCGTTGCTCTCCAAGTaGGCTGGCGCCCCTGAGTCCTTAGCCAGTACTTTGAATTCAAAA +
Preference number: 5 (lower is better)
Translates to: FTSKTVTLTVALLSK*AGAPESLASTLNSK
Trigger: TTTTGAATTCAAAGTACTGGCTAAGGACTCAGGGGCGCCAGCGCACTTGGAGAGCAACGCCACGGTGAGGGTGACGGTTTTAGACGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 90 bp ATCATGCAAATCTCCTTGTCGTTAGCGAAAACCTCTAGGGAGAGCTaGCACTTGGCATTGTGGCGGCATAAGGACTCACGGTCGATGCGC +
Preference number: 5 (lower is better)
Translates to: IMQISLSLAKTSRES*HLALWRHKDSRSMR
Trigger: GCGCATCGACCGTGAGTCCTTATGCCGCCACAATGCCAAGTGCCAGCTCTCCCTAGAGGTTTTCGCTAACGACAAGGAGATTTGCATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 90 bp AGAATGGAGTATGACACTGTCCCATTTTGGCCCAGGTCGGGATCCTaGGCTAGCACTGACCCGAGGTATTCTCCTGGAATGTTGTTCTCG +
Preference number: 5 (lower is better)
Translates to: RMEYDTVPFWPRSGS*ASTDPRYSPGMLFS
Trigger: CGAGAACAACATTCCAGGAGAATACCTCGGGTCAGTGCTAGCCCAGGATCCCGACCTGGGCCAAAATGGGACAGTGTCATACTCCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp CAAATATGGGTTAATGTTTGGTGTAGCTTGGACTACTGCAAGGTCTTTTCGGGAACCAGCTCTGGGAACTaGGTGCCGTCGCCGCGGGAC +
Preference number: 5 (lower is better)
Translates to: QIWVNVWCSLDYCKVFSGTSSGN*VPSPRD
Trigger: GTCCCGCGGCGACGGCACCAAGTTCCCAGAGCTGGT...TCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 90 bp TGGAATGCACATCCGCGAAGACCCTTGCCATCTGATCAGAAGCCATaGAGGAAGGGTCTCTTGGTTGCTTACTGGGTGAAGGGTACTGAC +
Preference number: 5 (lower is better)
Translates to: WNAHPRRPLPSDQKP*RKGLLVAYWVKGTD
Trigger: GTCAGTACCCTTCACCCAGTAAGCAACCAAGAGACCCTTCCTTCATGGCTTCTGATCAGATGGCAAGGGTCTTCGCGGATGTGCATTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp AAGGTAACTTGTCTCATCCTCCTTTTTGCGTCTTTCCAATTTCTTCTCTCTCTCCGGCCCAGATCCCTGTaGGGCTGCTCCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: KVTCLILLFASFQFLLSLRPRSL*GCSSCS
Trigger: GGAGCAGCTGGAGCAGCCCAACAGGGATCTGGGCCG...GAGAGAGAGAAGAAATTGGAAAGACGCAAAAAGGAGGATGAGACAAGTTACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp CAAATATGGGTTAATGTTTGGTGTAGCTTGGACTACTGCAAGGTCTTTTCGGGAGCATCCTTGCCGATGTaGCCAATCACCGTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: QIWVNVWCSLDYCKVFSGASLPM*PITVPA
Trigger: GGCCGGCACGGTGATTGGCAACATCGGCAAGGATGC...TCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp TGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAACCGTCGCCGCGGGACTaGACGTCCAGGGCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: CTIHYSHCFLKGMILASQPSPRD*TSRAKR
Trigger: CCTCTTTGCCCTGGACGTCAAGTCCCGCGGCGACGG...TTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp AAGGTAACTTGTCTCATCCTCCTTTTTGCGTCTTTCCAATTTCTTCTCTCTCTCTACCCCAGGCCAGCATaGCGCGGGACCTGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: KVTCLILLFASFQFLLSLYPRPA*RGTCSS
Trigger: TGAGCTGCAGGTCCCGCGCAATGCTGGCCTGGGGTA...GAGAGAGAGAAGAAATTGGAAAGACGCAAAAAGGAGGATGAGACAAGTTACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 90 bp GGCCACAATGGTCACATTGTACTCGTCTTGTGTCTCACGGTCCAGTaGACGGTCAGTCACCACGGTATAGAAGTTGTCATAGTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: GHNGHIVLVLCLTVQ*TVSHHGIEVVIVLF
Trigger: GAAGAGAACTATGACAACTTCTATACCGTGGTGACTGACCGTCCACTGGACCGTGAGACACAAGACGAGTACAATGTGACCATTGTGGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp TGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAACCCTCACCGTGGCGTaGCTCTCCAAGTGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: CTIHYSHCFLKGMILASQTLTVA*LSKCAG
Trigger: GCCAGCGCACTTGGAGAGCAACGCCACGGTGAGGGT...TTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTCTAAGGGCCCAGGTTTaGCTTCACAGCCATCCAGGG +
Preference number: 5 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCLRAQV*LHSHPG
Trigger: CCCTGGATGGCTGTGAAGCAAAACCTGGGCCCTTAG...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 90 bp ACGTGGAGCTACTTTGAACAAACTGCTGCCTGCTGCCCATGTAATTaGGCTCTGCGGGAAAATTGTCTGTCTGAATTATGGACATCCGAG +
Preference number: 5 (lower is better)
Translates to: TWSYFEQTAACCPCN*ALRENCLSELWTSE
Trigger: CTCGGATGTCCATAATTCAGACAGACAATTTTCCCGCAGAGCCCAATTACATGGGCAGCAGGCAGCAGTTTGTTCAAAGTAGCTCCACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp ACAGTTAAGTCAGCATCAATCTCGTGGGAGGACAGTCTTAGAGTGATCAGAAATAGCTTGACTGTGACCTaGCAGTGGGCTGGGATTGGG +
Preference number: 5 (lower is better)
Translates to: TVKSASISWEDSLRVIRNSLTVT*QWAGIG
Trigger: CCCAATCCCAGCCCACTGCAAGGTCACAGTCAAGCT...ATTTCTGATCACTCTAAGACTGTCCTCCCACGAGATTGATGCTGACTTAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp ACAGTTAAGTCAGCATCAATCTCGTGGGAGGACAGTCTTAGAGTGATCAGAAATTGCGGGACAGTCAGGTaGTTGGAGGCTGGCTTAAGA +
Preference number: 5 (lower is better)
Translates to: TVKSASISWEDSLRVIRNCGTVR*LEAGLR
Trigger: TCTTAAGCCAGCCTCCAACAACCTGACTGTCCCGCA...ATTTCTGATCACTCTAAGACTGTCCTCCCACGAGATTGATGCTGACTTAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp ACAGTTAAGTCAGCATCAATCTCGTGGGAGGACAGTCTTAGAGTGATCAGAAATCATCCGCGAAGACCCTaGCCATCTGATCAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: TVKSASISWEDSLRVIRNHPRRP*PSDQKP
Trigger: TGGCTTCTGATCAGATGGCAAGGGTCTTCGCGGATG...ATTTCTGATCACTCTAAGACTGTCCTCCCACGAGATTGATGCTGACTTAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp TACAAAGAGATTTGTGCGGTAATCTGCATTTTCAGCCTGATTGGCTaGAGGGAACTGTGGCATCCAACACCTATCAGAATGACCAAGCAC +
Preference number: 5 (lower is better)
Translates to: YKEICAVICIFSLIG*RELWHPTPIRMTKH
Trigger: GTGCTTGGTCATTCTGATAGGTGTTGGATGCCACAGTTCCCTGCAGCCAATCAGGCTGAAAATGCAGATTACCGCACAAATCTCTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 90 bp TGGGTACAAAGAGATTTGTGCGGTAATCTGCATTTTCAGCCTGATTaGCTGCAGGGAACTGTGGCATCCAACACCTATCAGAATGACCAA +
Preference number: 5 (lower is better)
Translates to: WVQRDLCGNLHFQPD*LQGTVASNTYQNDQ
Trigger: TTGGTCATTCTGATAGGTGTTGGATGCCACAGTTCCCTGCAGCCAATCAGGCTGAAAATGCAGATTACCGCACAAATCTCTTTGTACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGAGGGAGAGCTGGCACTaGGCATTGTGGCGGCATAAG +
Preference number: 5 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQRESWH*ALWRHK
Trigger: CTTATGCCGCCACAATGCCAAGTGCCAGCTCTCCCT...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGGAGGGGCAGGCGGGTTaGGTAGTCGAAGTACATAGG +
Preference number: 5 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQEGQAG*VVEVHR
Trigger: CCTATGTACTTCGACTACCAAACCCGCCTGCCCCTC...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp AGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAAAGGCTTCCTTGGAAGGGGACAGTCAGGTTGTaGGAGGCTGGCTTAAGATAC +
Preference number: 5 (lower is better)
Translates to: SHCFLKGMILASQRLPWKGTVRL*EAGLRY
Trigger: GTATCTTAAGCCAGCCTCCAACAACCTGACTGTCCC...CTTCCAAGGAAGCCTTTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp GTTGTTGTCGTCGTCGTTGTTCACCAATCACTTGGTACAGCGAAGAACCTTATGGAAGTAGTTTTCATCTaGAGTGCCTCCCTAACCGAC +
Preference number: 5 (lower is better)
Translates to: VVVVVVVHQSLGTAKNLMEVVFI*SASLTD
Trigger: GTCGGTTAGGGAGGCACTCAAGATGAAAACTACTTC...CATAAGGTTCTTCGCTGTACCAAGTGATTGGTGAACAACGACGACGACAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGCCAGGGAGCCTTTTGTaGAGGCGCAAGGCTCAATGC +
Preference number: 5 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQPGSLL*RRKAQC
Trigger: GCATTGAGCCTTGCGCCTCAACAAAAGGCTCCCTGG...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 90 bp AACATTAGCTTCAACTGTGGGTACAAAGAGATTTGTGCGGTAATCTaGATTTTCAGCCTGATTGGCTGCAGGGAACTGTGGCATCCAACA +
Preference number: 5 (lower is better)
Translates to: NISFNCGYKEICAVI*IFSLIGCRELWHPT
Trigger: TGTTGGATGCCACAGTTCCCTGCAGCCAATCAGGCTGAAAATGCAGATTACCGCACAAATCTCTTTGTACCCACAGTTGAAGCTAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTAGCTGGCACTTGGCATaGTGGCGGCATAAGGACTCA +
Preference number: 5 (lower is better)
Translates to: LGHMIHLTELTASSSTFTSWHLA*WRHKDS
Trigger: TGAGTCCTTATGCCGCCACAATGCCAAGTGCCAGCT...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGGAGGGAGCGTTGTCGTaGATGTCCTGGATCTCTACC +
Preference number: 5 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQEGALS*MSWIST
Trigger: GGTAGAGATCCAGGACATCAACGACAACGCTCCCTC...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp AAGGTAACTTGTCTCATCCTCCTTTTTGCGTCTTTCCAATTTCTTCTCTCTCTCTCGATCACCTTCACATaGATCTGTACGGTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: KVTCLILLFASFQFLLSLSITFT*ICTVAE
Trigger: CTCCGCCACCGTACAGATCAATGTGAAGGTGATCGA...GAGAGAGAGAAGAAATTGGAAAGACGCAAAAAGGAGGATGAGACAAGTTACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp ATGATGTGTACACACACCGGAACCACTGAAGATACTTTGAGAGCCAACCAATGTAAACGTGGAGCTACTTaGAACAAACTGCTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: MMCTHTGTTEDTLRANQCKRGAT*NKLLPA
Trigger: AGCAGGCAGCAGTTTGTTCAAAGTAGCTCCACGTTT...ACATTGGTTGGCTCTCAAAGTATCTTCAGTGGTTCCGGTGTGTGTACACATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTCATCCAGGGAGCCTTTaGTTGAGGCGCAAGGCTCAA +
Preference number: 5 (lower is better)
Translates to: LGHMIHLTELTASSSTFTHPGSL*LRRKAQ
Trigger: TTGAGCCTTGCGCCTCAACAAAAGGCTCCCTGGATG...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTCACATTGTACTCGTCTaGTGTCTCACGGTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: LGHMIHLTELTASSSTFTHIVLV*CLTVQW
Trigger: CCACTGGACCGTGAGACACAAGACGAGTACAATGTG...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGGCCTTTGTTAGTGTCTaGGTCACTGTCCGCCTGATC +
Preference number: 5 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQAFVSV*VTVRLI
Trigger: GATCAGGCGGACAGTGACCAAGACACTAACAAAGGC...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp CAAATATGGGTTAATGTTTGGTGTAGCTTGGACTACTGCAAGGTCTTTTCGGGAACTGGACTGTTGTCATaGGAATCGATCACCTTCACA +
Preference number: 5 (lower is better)
Translates to: QIWVNVWCSLDYCKVFSGTGLLS*ESITFT
Trigger: TGTGAAGGTGATCGATTCCAATGACAACAGTCCAGT...TCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp AAGGTAACTTGTCTCATCCTCCTTTTTGCGTCTTTCCAATTTCTTCTCTCTCTCGCCACAATGGTCACATaGTACTCGTCTTGTGTCTCA +
Preference number: 5 (lower is better)
Translates to: KVTCLILLFASFQFLLSLATMVT*YSSCVS
Trigger: TGAGACACAAGACGAGTACAATGTGACCATTGTGGC...GAGAGAGAGAAGAAATTGGAAAGACGCAAAAAGGAGGATGAGACAAGTTACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGGTGAACCGAGGCGGATaGTCATTCTCATCCAGAATC +
Preference number: 5 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQVNRGG*SFSSRI
Trigger: GATTCTGGATGAGAATGACAATCCGCCTCGGTTCAC...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGGAGCGGATGATAAGTTaGGCCACAGCGGAAAGGGTG +
Preference number: 5 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKERMIS*ATAERV
Trigger: CACCCTTTCCGCTGTGGCCAAACTTATCATCCGCTC...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGGCTCGAATTAGTCCCTaGTCCGGTGAAGCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKARISP*SGEAGV
Trigger: CACACCAGCTTCACCGGACAAGGGACTAATTCGAGC...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGGGCTCAATGCATGCCTaGGTTGGGCTGCTAGATGCT +
Preference number: 5 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKGSMHA*VGLLDA
Trigger: AGCATCTAGCAGCCCAACCAAGGCATGCATTGAGCC...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 90 bp ATTAATGCACTCTTCTGGTTCTTGTTCGAGTGGCTGACTTTTAGTTaGAGTAGTTTTCATCTTGAGTGCCTCCCTAACCGACATGTCACA +
Preference number: 5 (lower is better)
Translates to: INALFWFLFEWLTFS*SSFHLECLPNRHVT
Trigger: TGTGACATGTCGGTTAGGGAGGCACTCAAGATGAAAACTACTTCAACTAAAAGTCAGCCACTCGAACAAGAACCAGAAGAGTGCATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp TGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAATCGAAGACTGGACTGTaGTCATTGGAATCGATCACC +
Preference number: 5 (lower is better)
Translates to: CTIHYSHCFLKGMILASQSKTGL*SLESIT
Trigger: GGTGATCGATTCCAATGACAACAGTCCAGTCTTCGA...TTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp CTTGGTCACATGATTCACTTGACTGAATTAACAGCGTCTTCATCTACCTTTACTTCCTGGATCTCTACCTaGATCATGCAAATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LGHMIHLTELTASSSTFTSWIST*IMQISL
Trigger: CAAGGAGATTTGCATGATCAAGGTAGAGATCCAGGA...AGTAAAGGTAGATGAAGACGCTGTTAATTCAGTCAAGTGAATCATGTGACCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGGTTGTTCTCGTGTACTaGGAGCACGTAAAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQVVLVY*EHVKSF
Trigger: AAAGGACTTTACGTGCTCCAAGTACACGAGAACAAC...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp CAAATATGGGTTAATGTTTGGTGTAGCTTGGACTACTGCAAGGTCTTTTCGGGATCCTTAGCCAGTACTTaGAATTCAAAAGCCTTCGTT +
Preference number: 5 (lower is better)
Translates to: QIWVNVWCSLDYCKVFSGSLAST*NSKAFV
Trigger: AACGAAGGCTTTTGAATTCAAAGTACTGGCTAAGGA...TCCCGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACCCATATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp TGTACCATCCATTACAGCCATTGTTTCCTCAAAGGTATGATTTTGGCATCACAATTTTCCCGTTTACACTaGACAGCGATGGTGATCATG +
Preference number: 5 (lower is better)
Translates to: CTIHYSHCFLKGMILASQFSRLH*TAMVIM
Trigger: CATGATCACCATCGCTGTCAAGTGTAAACGGGAAAA...TTGTGATGCCAAAATCATACCTTTGAGGAAACAATGGCTGTAATGGATGGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp ATGTTTCAGACGCTTAACAATACATTGAACAGCTGGTTACTTAGAACTAAGAAGACAATCACTGGAGCGTaGTCGTTCACGTCTAAAACC +
Preference number: 5 (lower is better)
Translates to: MFQTLNNTLNSWLLRTKKTITGA*SFTSKT
Trigger: GGTTTTAGACGTGAACGACAACGCTCCAGTGATTGT...CTTCTTAGTTCTAAGTAACCAGCTGTTCAATGTATTGTTAAGCGTCTGAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS-3UTR CAA 90 bp TTTGACATTTATACTGTTTCTATACTGGCTTGGTGGCAAGAAAAGAAGGCACAGATAGTGTGCTCTCGCTaGTCTTTTCCAAATGTACAA +
Preference number: 5 (lower is better)
Translates to: FDIYTVSILAWWQEKKAQIVCSR*SFPNVQ
Trigger: TTGTACATTTGGAAAAGACAAGCGAGAGCACACTAT...CTGTGCCTTCTTTTCTTGCCACCAAGCCAGTATAGAAACAGTATAAATGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp GGTGCGGAGCCCGTTCTCGCCAGCGTCTGGGTCGTGTaGGCTCGTGAGGGGGAAGCGGGTGCCGGGTGCCGC +
Preference number: 6 (lower is better)
Translates to: GAEPVLASVWVV*AREGEAGAGCR
Trigger: GCGGCACCCGGCACCCGCTTCCCCCTCACGAGCGCACACGACCCAGACGCTGGCGAGAACGGGCTCCGCACC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp CTGCCGCGCTCAGCCGGCGGAAGCCCGGGCTGCAGTCGGGCATCCTaGCCGATGTTGCCAATCACCGTGCCGGCCCCTTGCTCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: LPRSAGGSPGCSRAS*PMLPITVPAPCSSG
Trigger: GCCAGAGGAGCAAGGGGCCGGCACGGTGATTGGCAACATCGGCAAGGATGCCCGACTGCAGCCCGGGCTTCCGCCGGCTGAGCGCGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp CTGCCGCTGCCGCGCTCAGCCGGCGGAAGCCCGGGCTaGAGTCGGGCATCCTTGCCGATGTTGCCAATCACC +
Preference number: 6 (lower is better)
Translates to: LPLPRSAGGSPG*SRASLPMLPIT
Trigger: GGTGATTGGCAACATCGGCAAGGATGCCCGACTGCAGCCCGGGCTTCCGCCGGCTGAGCGCGGCAGCGGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp GTGCGGAGTTCTCCAGCACCCGGTAACTGCCAGACTTaGTCCTCCCGCTGCCGCTGCCGCGCTCAGCCGGCG +
Preference number: 6 (lower is better)
Translates to: VRSSPAPGNCQT*SSRCRCRAQPA
Trigger: CGCCGGCTGAGCGCGGCAGCGGCAGCGGGAGGAGCAAGTCTGGCAGTTACCGGGTGCTGGAGAACTCCGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp CAGCCGGCGGAAGCCCGGGCTGCAGTCGGGCATCCTTaGCGATGTTGCCAATCACCGTGCCGGCCCCTTGCT +
Preference number: 6 (lower is better)
Translates to: QPAEARAAVGHP*RCCQSPCRPLA
Trigger: AGCAAGGGGCCGGCACGGTGATTGGCAACATCGGCAAGGATGCCCGACTGCAGCCCGGGCTTCCGCCGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 72 bp GAGCAGATAGGTGCGGAGCCCGTTCTCGCCAGCGTCTaGGTCGTGTGCGCTCGTGAGGGGGAAGCGGGTGCC +
Preference number: 6 (lower is better)
Translates to: EQIGAEPVLASV*VVCAREGEAGA
Trigger: GGCACCCGCTTCCCCCTCACGAGCGCACACGACCCAGACGCTGGCGAGAACGGGCTCCGCACCTATCTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp TCAGCCGGCGGAAGCCCGGGCTGCAGTCGGGCATCCTaGCCGATGTTGCCAATCACCGTGCCGGCCCCTTGC +
Preference number: 6 (lower is better)
Translates to: SAGGSPGCSRAS*PMLPITVPAPC
Trigger: GCAAGGGGCCGGCACGGTGATTGGCAACATCGGCAAGGATGCCCGACTGCAGCCCGGGCTTCCGCCGGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp GGAAGCCCGGGCTGCAGTCGGGCATCCTTGCCGATGTaGCCAATCACCGTGCCGGCCCCTTGCTCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: GSPGCSRASLPM*PITVPAPCSSG
Trigger: GCCAGAGGAGCAAGGGGCCGGCACGGTGATTGGCAACATCGGCAAGGATGCCCGACTGCAGCCCGGGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp CGCTCTCTCCAAAGTCGCTGTCCAGGGCGCGCACGGTaGTTACCAGGTACCCCAGGCCAGCATTGCGCGGGA +
Preference number: 6 (lower is better)
Translates to: RSLQSRCPGRAR*LPGTPGQHCAG
Trigger: TCCCGCGCAATGCTGGCCTGGGGTACCTGGTAAGCACCGTGCGCGCCCTGGACAGCGACTTTGGAGAGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp AGCTCCACCACTGGGGTCACATCCTCCCAGAAGGGGTaGAGCGTGCGGATCTCGCCGCTGGACGGATCGATC +
Preference number: 6 (lower is better)
Translates to: SSTTGVTSSQKG*SVRISPLDGSI
Trigger: GATCGATCCGTCCAGCGGCGAGATCCGCACGCTGCACCCCTTCTGGGAGGATGTGACCCCAGTGGTGGAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp CTGTCCAGGGCGCGCACGGTGCTTACCAGGTACCCCAGGCCAGCATaGCGCGGGACCTGCAGCTCAGCTGTGTCATTCTGTAGCGTGGGA +
Preference number: 6 (lower is better)
Translates to: LSRARTVLTRYPRPA*RGTCSSAVSFCSVG
Trigger: TCCCACGCTACAGAATGACACAGCTGAGCTGCAGGTCCCGCGCAATGCTGGCCTGGGGTACCTGGTAAGCACCGTGCGCGCCCTGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp GCATCCACGGACTCTCGGCCCAGATCCCTGTTGGGCTaGTCCAGCTGCTCCAACACAGCTCCCATCTCGCTG +
Preference number: 6 (lower is better)
Translates to: ASTDSRPRSLLG*SSCSNTAPISL
Trigger: CAGCGAGATGGGAGCTGTGTTGGAGCAGCTGGAGCAGCCCAACAGGGATCTGGGCCGAGAGTCCGTGGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp GGAGGGGAGCCCCCGTCCCGGGCCACAATGGTCACATaGTACTCGTCTTGTGTCTCACGGTCCAGTGGACGG +
Preference number: 6 (lower is better)
Translates to: GGEPPSRATMVT*YSSCVSRSSGR
Trigger: CCGTCCACTGGACCGTGAGACACAAGACGAGTACAATGTGACCATTGTGGCCCGGGACGGGGGCTCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp GCGCGCACGGTGCTTACCAGGTACCCCAGGCCAGCATaGCGCGGGACCTGCAGCTCAGCTGTGTCATTCTGT +
Preference number: 6 (lower is better)
Translates to: ARTVLTRYPRPA*RGTCSSAVSFC
Trigger: ACAGAATGACACAGCTGAGCTGCAGGTCCCGCGCAATGCTGGCCTGGGGTACCTGGTAAGCACCGTGCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp CATCCGAGTGGCAGGGGTCTCGCTCGAATTAGTCCCTaGTCCGGTGAAGCTGGTGTGGCAGCCTGCGTGCCC +
Preference number: 6 (lower is better)
Translates to: HPSGRGLARISP*SGEAGVAACVP
Trigger: GGGCACGCAGGCTGCCACACCAGCTTCACCGGACAAGGGACTAATTCGAGCGAGACCCCTGCCACTCGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp CAGCACCAGAGTGTGGTGGTTCTGCAGCTCGCGGTCCAGTGCCTTTaGGATGACCAGCTCTGGGAACTTGGTGCCGTCGCCGCGGGACTT +
Preference number: 6 (lower is better)
Translates to: QHQSVVVLQLAVQCL*DDQLWELGAVAAGL
Trigger: AAGTCCCGCGGCGACGGCACCAAGTTCCCAGAGCTGGTCATCCAAAAGGCACTGGACCGCGAGCTGCAGAACCACCACACTCTGGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp AAGCTGGTGTGGCAGCCTGCGTGCCCCTGCGGGACAGTCAGGTTGTaGGAGGCTGGCTTAAGATACATCACCTCTGACCGGGGCGAGCTG +
Preference number: 6 (lower is better)
Translates to: KLVWQPACPCGTVRL*EAGLRYITSDRGEL
Trigger: CAGCTCGCCCCGGTCAGAGGTGATGTATCTTAAGCCAGCCTCCAACAACCTGACTGTCCCGCAGGGGCACGCAGGCTGCCACACCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp GTGAAGCTGGTGTGGCAGCCTGCGTGCCCCTGCGGGACAGTCAGGTaGTTGGAGGCTGGCTTAAGATACATCACCTCTGACCGGGGCGAG +
Preference number: 6 (lower is better)
Translates to: VKLVWQPACPCGTVR*LEAGLRYITSDRGE
Trigger: CTCGCCCCGGTCAGAGGTGATGTATCTTAAGCCAGCCTCCAACAACCTGACTGTCCCGCAGGGGCACGCAGGCTGCCACACCAGCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp GGGAGGTGGCCAGGGAGGGACTGCTCACCACGTTCATaGCGTTCATGGCGTTCCTCTCCTCCACCTCGCTCT +
Preference number: 6 (lower is better)
Translates to: GRWPGRDCSPRS*RSWRSSPPPRS
Trigger: AGAGCGAGGTGGAGGAGAGGAACGCCATGAACGTCATGAACGTGGTGAGCAGTCCCTCCCTGGCCACCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp CGCGCACGGTGCTTACCAGGTACCCCAGGCCAGCATTaGGCGGGACCTGCAGCTCAGCTGTGTCATTCTGTA +
Preference number: 6 (lower is better)
Translates to: RARCLPGTPGQH*AGPAAQLCHSV
Trigger: TACAGAATGACACAGCTGAGCTGCAGGTCCCGCGCAATGCTGGCCTGGGGTACCTGGTAAGCACCGTGCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp CCACTGGGGTCACATCCTCCCAGAAGGGGTGCAGCGTaGGGATCTCGCCGCTGGACGGATCGATCTCAAACA +
Preference number: 6 (lower is better)
Translates to: PLGSHPPRRGAA*GSRRWTDRSQT
Trigger: TGTTTGAGATCGATCCGTCCAGCGGCGAGATCCGCACGCTGCACCCCTTCTGGGAGGATGTGACCCCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp TGTCCGGTGAAGCTGGTGTGGCAGCCTGCGTGCCCCTaGGGGACAGTCAGGTTGTTGGAGGCTGGCTTAAGA +
Preference number: 6 (lower is better)
Translates to: CPVKLVWQPACP*GTVRLLEAGLR
Trigger: TCTTAAGCCAGCCTCCAACAACCTGACTGTCCCGCAGGGGCACGCAGGCTGCCACACCAGCTTCACCGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp ATTAGTCCCTTGTCCGGTGAAGCTGGTGTGGCAGCCTaGGTGCCCCTGCGGGACAGTCAGGTTGTTGGAGGC +
Preference number: 6 (lower is better)
Translates to: ISPLSGEAGVAA*VPLRDSQVVGG
Trigger: GCCTCCAACAACCTGACTGTCCCGCAGGGGCACGCAGGCTGCCACACCAGCTTCACCGGACAAGGGACTAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp GACTCTCGGCCCAGATCCCTGTTGGGCTGCTCCAGCTaGTCCAACACAGCTCCCATCTCGCTGGAAGCCCTA +
Preference number: 6 (lower is better)
Translates to: DSRPRSLLGCSS*SNTAPISLEAL
Trigger: TAGGGCTTCCAGCGAGATGGGAGCTGTGTTGGAGCAGCTGGAGCAGCCCAACAGGGATCTGGGCCGAGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 72 bp TGTGGCGGCATAAGGACTCACGGTCGATGCGCTGTTTaGTGTAGAGGAGCCCGCTGTCGGCGTCCACGTCCA +
Preference number: 6 (lower is better)
Translates to: CGGIRTHGRCAV*CRGARCRRPRP
Trigger: TGGACGTGGACGCCGACAGCGGGCTCCTCTACACCAAACAGCGCATCGACCGTGAGTCCTTATGCCGCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 72 bp TCCCCGCCATCTAGGGCGGTCAGCACCAGAGTGTGGTaGTTCTGCAGCTCGCGGTCCAGTGCCTTTTGGATG +
Preference number: 6 (lower is better)
Translates to: SPPSRAVSTRVW*FCSSRSSAFWM
Trigger: CATCCAAAAGGCACTGGACCGCGAGCTGCAGAACCACCACACTCTGGTGCTGACCGCCCTAGATGGCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 72 bp TCGCTCGAATTAGTCCCTTGTCCGGTGAAGCTGGTGTaGCAGCCTGCGTGCCCCTGCGGGACAGTCAGGTTG +
Preference number: 6 (lower is better)
Translates to: SLELVPCPVKLV*QPACPCGTVRL
Trigger: CAACCTGACTGTCCCGCAGGGGCACGCAGGCTGCCACACCAGCTTCACCGGACAAGGGACTAATTCGAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp AATTATGGACATCCGAGTGGCAGGGGTCTCGCTCGAATTAGTCCCTaGTCCGGTGAAGCTGGTGTGGCAGCCTGCGTGCCCCTGCGGGAC +
Preference number: 6 (lower is better)
Translates to: NYGHPSGRGLARISP*SGEAGVAACVPLRD
Trigger: GTCCCGCAGGGGCACGCAGGCTGCCACACCAGCTTCACCGGACAAGGGACTAATTCGAGCGAGACCCCTGCCACTCGGATGTCCATAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp AGGCTCAATGCATGCCTTGGTTGGGCTGCTAGATGCTaGGGGGACCTCTTGGAGGAGAGGGCTCAGGGCACG +
Preference number: 6 (lower is better)
Translates to: RLNACLGWAARC*GDLLEERAQGT
Trigger: CGTGCCCTGAGCCCTCTCCTCCAAGAGGTCCCCTCAGCATCTAGCAGCCCAACCAAGGCATGCATTGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp CCATCTAGGGCGGTCAGCACCAGAGTGTGGTGGTTCTaGAGCTCGCGGTCCAGTGCCTTTTGGATGACCAGC +
Preference number: 6 (lower is better)
Translates to: PSRAVSTRVWWF*SSRSSAFWMTS
Trigger: GCTGGTCATCCAAAAGGCACTGGACCGCGAGCTGCAGAACCACCACACTCTGGTGCTGACCGCCCTAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp CTTACCAGGTACCCCAGGCCAGCATTGCGCGGGACCTaGAGCTCAGCTGTGTCATTCTGTAGCGTGGGAAGC +
Preference number: 6 (lower is better)
Translates to: LTRYPRPALRGT*SSAVSFCSVGS
Trigger: GCTTCCCACGCTACAGAATGACACAGCTGAGCTGCAGGTCCCGCGCAATGCTGGCCTGGGGTACCTGGTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 72 bp CAGAATCTTGACGGCGAAGGACTTGGTGGAGTTAAGTaGAGGGGAGCCCCCGTCCCGGGCCACAATGGTCAC +
Preference number: 6 (lower is better)
Translates to: QNLDGEGLGGVK*RGAPVPGHNGH
Trigger: GTGACCATTGTGGCCCGGGACGGGGGCTCCCCTCCACTTAACTCCACCAAGTCCTTCGCCGTCAAGATTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp AGTGTGGTGGTTCTGCAGCTCGCGGTCCAGTGCCTTTaGGATGACCAGCTCTGGGAACTTGGTGCCGTCGCC +
Preference number: 6 (lower is better)
Translates to: SVVVLQLAVQCL*DDQLWELGAVA
Trigger: GGCGACGGCACCAAGTTCCCAGAGCTGGTCATCCAAAAGGCACTGGACCGCGAGCTGCAGAACCACCACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp TGGCAGCCTGCGTGCCCCTGCGGGACAGTCAGGTTGTaGGAGGCTGGCTTAAGATACATCACCTCTGACCGG +
Preference number: 6 (lower is better)
Translates to: WQPACPCGTVRL*EAGLRYITSDR
Trigger: CCGGTCAGAGGTGATGTATCTTAAGCCAGCCTCCAACAACCTGACTGTCCCGCAGGGGCACGCAGGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp GAGTTAAGTGGAGGGGAGCCCCCGTCCCGGGCCACAATGGTCACATaGTACTCGTCTTGTGTCTCACGGTCCAGTGGACGGTCAGTCACC +
Preference number: 6 (lower is better)
Translates to: ELSGGEPPSRATMVT*YSSCVSRSSGRSVT
Trigger: GGTGACTGACCGTCCACTGGACCGTGAGACACAAGACGAGTACAATGTGACCATTGTGGCCCGGGACGGGGGCTCCCCTCCACTTAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp GGAGCGTTGTCGTTCACGTCTAAAACCGTCACCCTCACCGTGGCGTaGCTCTCCAAGTGCGCTGGCGCCCCTGAGTCCTTAGCCAGTACT +
Preference number: 6 (lower is better)
Translates to: GALSFTSKTVTLTVA*LSKCAGAPESLAST
Trigger: AGTACTGGCTAAGGACTCAGGGGCGCCAGCGCACTTGGAGAGCAACGCCACGGTGAGGGTGACGGTTTTAGACGTGAACGACAACGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp CGTGAGGGGGAAGCGGGTGCCGGGTGCCGCGTTCTCTaGGATGTCCATTTCTATCTGATCCGAGGGGAAAGA +
Preference number: 6 (lower is better)
Translates to: REGEAGAGCRVL*DVHFYLIRGER
Trigger: TCTTTCCCCTCGGATCAGATAGAAATGGACATCTCAGAGAACGCGGCACCCGGCACCCGCTTCCCCCTCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp ACAGGTGGTCATCGTTGCCATCCACGATCTCATAGGTaGGGCGCCCGCTCTCTCCAAAGTCGCTGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: TGGHRCHPRSHR*GARSLQSRCPG
Trigger: CCCTGGACAGCGACTTTGGAGAGAGCGGGCGCCTCACCTATGAGATCGTGGATGGCAACGATGACCACCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp CAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCCGCCTaGTCGCTGTCCCCGTGCCCACTGTCTCTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: QEPLLVSWSLSA*SLSPCPLSLRL
Trigger: CAGCCTGAGAGACAGTGGGCACGGGGACAGCGATCAGGCGGACAGTGACCAAGACACTAACAAAGGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp ACTTGGCATTGTGGCGGCATAAGGACTCACGGTCGATaGGCTGTTTGGTGTAGAGGAGCCCGCTGTCGGCGT +
Preference number: 6 (lower is better)
Translates to: TWHCGGIRTHGR*AVWCRGARCRR
Trigger: ACGCCGACAGCGGGCTCCTCTACACCAAACAGCGCATCGACCGTGAGTCCTTATGCCGCCACAATGCCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp CACCAGAGTGTGGTGGTTCTGCAGCTCGCGGTCCAGTaGCTTTTGGATGACCAGCTCTGGGAACTTGGTGCC +
Preference number: 6 (lower is better)
Translates to: HQSVVVLQLAVQ*LLDDQLWELGA
Trigger: GGCACCAAGTTCCCAGAGCTGGTCATCCAAAAGGCACTGGACCGCGAGCTGCAGAACCACCACACTCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp AAAACCGTCACCCTCACCGTGGCGTTGCTCTCCAAGTaGGCTGGCGCCCCTGAGTCCTTAGCCAGTACTTTG +
Preference number: 6 (lower is better)
Translates to: KTVTLTVALLSK*AGAPESLASTL
Trigger: CAAAGTACTGGCTAAGGACTCAGGGGCGCCAGCGCACTTGGAGAGCAACGCCACGGTGAGGGTGACGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp CCCGTCCCGGGCCACAATGGTCACATTGTACTCGTCTaGTGTCTCACGGTCCAGTGGACGGTCAGTCACCAC +
Preference number: 6 (lower is better)
Translates to: PVPGHNGHIVLV*CLTVQWTVSHH
Trigger: GTGGTGACTGACCGTCCACTGGACCGTGAGACACAAGACGAGTACAATGTGACCATTGTGGCCCGGGACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp TCGTTCACGTCTAAAACCGTCACCCTCACCGTGGCGTaGCTCTCCAAGTGCGCTGGCGCCCCTGAGTCCTTA +
Preference number: 6 (lower is better)
Translates to: SFTSKTVTLTVA*LSKCAGAPESL
Trigger: TAAGGACTCAGGGGCGCCAGCGCACTTGGAGAGCAACGCCACGGTGAGGGTGACGGTTTTAGACGTGAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp GTGTGGCAGCCTGCGTGCCCCTGCGGGACAGTCAGGTaGTTGGAGGCTGGCTTAAGATACATCACCTCTGAC +
Preference number: 6 (lower is better)
Translates to: VWQPACPCGTVR*LEAGLRYITSD
Trigger: GTCAGAGGTGATGTATCTTAAGCCAGCCTCCAACAACCTGACTGTCCCGCAGGGGCACGCAGGCTGCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp AGGGGAGCCCCCGTCCCGGGCCACAATGGTCACATTGTACTCGTCTaGTGTCTCACGGTCCAGTGGACGGTCAGTCACCACGGTATAGAA +
Preference number: 6 (lower is better)
Translates to: RGAPVPGHNGHIVLV*CLTVQWTVSHHGIE
Trigger: TTCTATACCGTGGTGACTGACCGTCCACTGGACCGTGAGACACAAGACGAGTACAATGTGACCATTGTGGCCCGGGACGGGGGCTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp CGAGGCGGATTGTCATTCTCATCCAGAATCTTGACGGCGAAGGACTaGGTGGAGTTAAGTGGAGGGGAGCCCCCGTCCCGGGCCACAATG +
Preference number: 6 (lower is better)
Translates to: RGGLSFSSRILTAKD*VELSGGEPPSRATM
Trigger: CATTGTGGCCCGGGACGGGGGCTCCCCTCCACTTAACTCCACCAAGTCCTTCGCCGTCAAGATTCTGGATGAGAATGACAATCCGCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp CCATCCAGGGAGCCTTTTGTTGAGGCGCAAGGCTCAATGCATGCCTaGGTTGGGCTGCTAGATGCTGAGGGGACCTCTTGGAGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: PSREPFVEAQGSMHA*VGLLDAEGTSWRRG
Trigger: CCCTCTCCTCCAAGAGGTCCCCTCAGCATCTAGCAGCCCAACCAAGGCATGCATTGAGCCTTGCGCCTCAACAAAAGGCTCCCTGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp TGCCTCCCTAACCGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTaGGTCACTGTCCGCCTGATCGCTGTCCCCGTGCCCACTGTCTCT +
Preference number: 6 (lower is better)
Translates to: CLPNRHVTAGAFVSV*VTVRLIAVPVPTVS
Trigger: AGAGACAGTGGGCACGGGGACAGCGATCAGGCGGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCGGTTAGGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp CAGTGGGCAGGTAGGAGCTGCTTGCTTCTGCTAAGGGCCCAGGTTTaGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGCGCAAGGCT +
Preference number: 6 (lower is better)
Translates to: QWAGRSCLLLLRAQV*LHSHPGSLLLRRKA
Trigger: AGCCTTGCGCCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACCTGGGCCCTTAGCAGAAGCAAGCAGCTCCTACCTGCCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp AGAAGAGCTCCCGCACGCGGTCGGGCACATAGCTGCTaGAGGAGTAGAGGACTTCTCCGTTGGGACCTTCAT +
Preference number: 6 (lower is better)
Translates to: RRAPARGRAHSC*RSRGLLRWDLH
Trigger: ATGAAGGTCCCAACGGAGAAGTCCTCTACTCCTTCAGCAGCTATGTGCCCGACCGCGTGCGGGAGCTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 72 bp CTCAGTGTCACTATGAGAGGCAGGGACATGTCCCAGTaGTGCTGCTCGCCATTCACTCGCGGTACCCCTTCA +
Preference number: 6 (lower is better)
Translates to: LSVTMRGRDMSQ*CCSPFTRGTPS
Trigger: TGAAGGGGTACCGCGAGTGAATGGCGAGCAGCACCACTGGGACATGTCCCTGCCTCTCATAGTGACACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 72 bp ACACAGCTCCCATCTCGCTGGAAGCCCTACGGGCTCTaGAATGCACATCCGCGAAGACCCTTGCCATCTGAT +
Preference number: 6 (lower is better)
Translates to: TQLPSRWKPYGL*NAHPRRPLPSD
Trigger: ATCAGATGGCAAGGGTCTTCGCGGATGTGCATTCCAGAGCCCGTAGGGCTTCCAGCGAGATGGGAGCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp AACCGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTaGGTCACTGTCCGCCTGATCGCTGTCCCCGTGCCC +
Preference number: 6 (lower is better)
Translates to: NRHVTAGAFVSV*VTVRLIAVPVP
Trigger: GGGCACGGGGACAGCGATCAGGCGGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp GCCTCGAAGACTGGACTGTTGTCATTGGAATCGATCACCTTCACATaGATCTGTACGGTGGCGGAGCGTGGAGGCTCCCCGCCATCTAGG +
Preference number: 6 (lower is better)
Translates to: ASKTGLLSLESITFT*ICTVAERGGSPPSR
Trigger: CCTAGATGGCGGGGAGCCTCCACGCTCCGCCACCGTACAGATCAATGTGAAGGTGATCGATTCCAATGACAACAGTCCAGTCTTCGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp TACTGGGTGAAGGGTACTGACTGTCAGTGGGCAGGTAGGAGCTGCTaGCTTCTGCTAAGGGCCCAGGTTTTGCTTCACAGCCATCCAGGG +
Preference number: 6 (lower is better)
Translates to: YWVKGTDCQWAGRSC*LLLRAQVLLHSHPG
Trigger: CCCTGGATGGCTGTGAAGCAAAACCTGGGCCCTTAGCAGAAGCAAGCAGCTCCTACCTGCCCACTGACAGTCAGTACCCTTCACCCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp CTGGACTGTTGTCATTGGAATCGATCACCTTCACATTaGTCTGTACGGTGGCGGAGCGTGGAGGCTCCCCGC +
Preference number: 6 (lower is better)
Translates to: LDCCHWNRSPSH*SVRWRSVEAPR
Trigger: GCGGGGAGCCTCCACGCTCCGCCACCGTACAGATCAATGTGAAGGTGATCGATTCCAATGACAACAGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp ATAAGTTTGGCCACAGCGGAAAGGGTGGGCTTGCCATaGTCGGTCACCTTCACCACAAGCTCCACCACTGGG +
Preference number: 6 (lower is better)
Translates to: ISLATAERVGLP*SVTFTTSSTTG
Trigger: CCCAGTGGTGGAGCTTGTGGTGAAGGTGACCGATCATGGCAAGCCCACCCTTTCCGCTGTGGCCAAACTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 72 bp GCGAAAACCTCTAGGGAGAGCTGGCACTTGGCATTGTaGCGGCATAAGGACTCACGGTCGATGCGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: AKTSRESWHLAL*RHKDSRSMRCL
Trigger: CAAACAGCGCATCGACCGTGAGTCCTTATGCCGCCACAATGCCAAGTGCCAGCTCTCCCTAGAGGTTTTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 72 bp GCGGGACCTGCAGCTCAGCTGTGTCATTCTGTAGCGTaGGAAGCACAATCACTGGAGCGTTGTCGTTCACGT +
Preference number: 6 (lower is better)
Translates to: AGPAAQLCHSVA*EAQSLERCRSR
Trigger: ACGTGAACGACAACGCTCCAGTGATTGTGCTTCCCACGCTACAGAATGACACAGCTGAGCTGCAGGTCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp TTGTCATTCTCATCCAGAATCTTGACGGCGAAGGACTaGGTGGAGTTAAGTGGAGGGGAGCCCCCGTCCCGG +
Preference number: 6 (lower is better)
Translates to: LSFSSRILTAKD*VELSGGEPPSR
Trigger: CCGGGACGGGGGCTCCCCTCCACTTAACTCCACCAAGTCCTTCGCCGTCAAGATTCTGGATGAGAATGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp GAGCCTTTTGTTGAGGCGCAAGGCTCAATGCATGCCTaGGTTGGGCTGCTAGATGCTGAGGGGACCTCTTGG +
Preference number: 6 (lower is better)
Translates to: EPFVEAQGSMHA*VGLLDAEGTSW
Trigger: CCAAGAGGTCCCCTCAGCATCTAGCAGCCCAACCAAGGCATGCATTGAGCCTTGCGCCTCAACAAAAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp GAGACGAAACCAATGGACGGCGCGTTATCGTTCCGGTCGATAAGCTaGACTGTGACCTTGCAGTGGGCTGGGATTGGGTTAGGTCCTAGG +
Preference number: 6 (lower is better)
Translates to: ETKPMDGALSFRSIS*TVTLQWAGIGLGPR
Trigger: CCTAGGACCTAACCCAATCCCAGCCCACTGCAAGGTCACAGTCAAGCTTATCGACCGGAACGATAACGCGCCGTCCATTGGTTTCGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp AGTCCTTTGGTGAACCGAGGCGGATTGTCATTCTCATCCAGAATCTaGACGGCGAAGGACTTGGTGGAGTTAAGTGGAGGGGAGCCCCCG +
Preference number: 6 (lower is better)
Translates to: SPLVNRGGLSFSSRI*TAKDLVELSGGEPP
Trigger: CGGGGGCTCCCCTCCACTTAACTCCACCAAGTCCTTCGCCGTCAAGATTCTGGATGAGAATGACAATCCGCCTCGGTTCACCAAAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp CCGGGTGCCGCGTTCTCTGAGATGTCCATTTCTATCTaGTCCGAGGGGAAAGAGGGAGCGTTGTCGTTGATG +
Preference number: 6 (lower is better)
Translates to: PGAAFSEMSISI*SEGKEGALSLM
Trigger: CATCAACGACAACGCTCCCTCTTTCCCCTCGGATCAGATAGAAATGGACATCTCAGAGAACGCGGCACCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp ACCCAGTGGAGCGTTCTCGGGCAGTTCCACCAAGTATaGCGGAGCCTCGAAGACTGGACTGTTGTCATTGGA +
Preference number: 6 (lower is better)
Translates to: TQWSVLGQFHQV*RSLEDWTVVIG
Trigger: TCCAATGACAACAGTCCAGTCTTCGAGGCTCCGTCATACTTGGTGGAACTGCCCGAGAACGCTCCACTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp CACCGTGGCGTTGCTCTCCAAGTGCGCTGGCGCCCCTaGGTCCTTAGCCAGTACTTTGAATTCAAAAGCCTT +
Preference number: 6 (lower is better)
Translates to: HRGVALQVRWRP*VLSQYFEFKSL
Trigger: AAGGCTTTTGAATTCAAAGTACTGGCTAAGGACTCAGGGGCGCCAGCGCACTTGGAGAGCAACGCCACGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp GTGAAGGGTACTGACTGTCAGTGGGCAGGTAGGAGCTaGTTGCTTCTGCTAAGGGCCCAGGTTTTGCTTCAC +
Preference number: 6 (lower is better)
Translates to: VKGTDCQWAGRS*LLLLRAQVLLH
Trigger: GTGAAGCAAAACCTGGGCCCTTAGCAGAAGCAAGCAGCTCCTACCTGCCCACTGACAGTCAGTACCCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp CCTACGGGCTCTGGAATGCACATCCGCGAAGACCCTTaGCATCTGATCAGAAGCCATGAAGGAAGGGTCTCT +
Preference number: 6 (lower is better)
Translates to: PTGSGMHIREDP*HLIRSHEGRVS
Trigger: AGAGACCCTTCCTTCATGGCTTCTGATCAGATGGCAAGGGTCTTCGCGGATGTGCATTCCAGAGCCCGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 72 bp TATGACACTGTCCCATTTTGGCCCAGGTCGGGATCCTaGGCTAGCACTGACCCGAGGTATTCTCCTGGAATG +
Preference number: 6 (lower is better)
Translates to: YDTVPFWPRSGS*ASTDPRYSPGM
Trigger: CATTCCAGGAGAATACCTCGGGTCAGTGCTAGCCCAGGATCCCGACCTGGGCCAAAATGGGACAGTGTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp TTAGCGAAAACCTCTAGGGAGAGCTGGCACTTGGCATaGTGGCGGCATAAGGACTCACGGTCGATGCGCTGT +
Preference number: 6 (lower is better)
Translates to: LAKTSRESWHLA*WRHKDSRSMRC
Trigger: ACAGCGCATCGACCGTGAGTCCTTATGCCGCCACAATGCCAAGTGCCAGCTCTCCCTAGAGGTTTTCGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp CCAATGGACGGCGCGTTATCGTTCCGGTCGATAAGCTaGACTGTGACCTTGCAGTGGGCTGGGATTGGGTTA +
Preference number: 6 (lower is better)
Translates to: PMDGALSFRSIS*TVTLQWAGIGL
Trigger: TAACCCAATCCCAGCCCACTGCAAGGTCACAGTCAAGCTTATCGACCGGAACGATAACGCGCCGTCCATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp CAGGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTaGAGGCGCAAGGCTCAATGCATGCCTTGGTTGGGC +
Preference number: 6 (lower is better)
Translates to: QVLLHSHPGSLL*RRKAQCMPWLG
Trigger: GCCCAACCAAGGCATGCATTGAGCCTTGCGCCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp GCCCAGGTTTTGCTTCACAGCCATCCAGGGAGCCTTTaGTTGAGGCGCAAGGCTCAATGCATGCCTTGGTTG +
Preference number: 6 (lower is better)
Translates to: AQVLLHSHPGSL*LRRKAQCMPWL
Trigger: CAACCAAGGCATGCATTGAGCCTTGCGCCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp GGTAGGAGCTGCTTGCTTCTGCTAAGGGCCCAGGTTTaGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: GRSCLLLLRAQV*LHSHPGSLLLR
Trigger: CCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACCTGGGCCCTTAGCAGAAGCAAGCAGCTCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp AAGGGTACTGACTGTCAGTGGGCAGGTAGGAGCTGCTaGCTTCTGCTAAGGGCCCAGGTTTTGCTTCACAGC +
Preference number: 6 (lower is better)
Translates to: KGTDCQWAGRSC*LLLRAQVLLHS
Trigger: GCTGTGAAGCAAAACCTGGGCCCTTAGCAGAAGCAAGCAGCTCCTACCTGCCCACTGACAGTCAGTACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp TCAGCTGTGTCATTCTGTAGCGTGGGAAGCACAATCACTGGAGCGTaGTCGTTCACGTCTAAAACCGTCACCCTCACCGTGGCGTTGCTC +
Preference number: 6 (lower is better)
Translates to: SAVSFCSVGSTITGA*SFTSKTVTLTVALL
Trigger: GAGCAACGCCACGGTGAGGGTGACGGTTTTAGACGTGAACGACAACGCTCCAGTGATTGTGCTTCCCACGCTACAGAATGACACAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp AGGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTaGGGCGCAAGGCTCAATGCATGCCTTGGTTGGGCT +
Preference number: 6 (lower is better)
Translates to: RFCFTAIQGAFC*GARLNACLGWA
Trigger: AGCCCAACCAAGGCATGCATTGAGCCTTGCGCCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp AGCCATGAAGGAAGGGTCTCTTGGTTGCTTACTGGGTaGAGGGTACTGACTGTCAGTGGGCAGGTAGGAGCT +
Preference number: 6 (lower is better)
Translates to: SHEGRVSWLLTG*RVLTVSGQVGA
Trigger: AGCTCCTACCTGCCCACTGACAGTCAGTACCCTTCACCCAGTAAGCAACCAAGAGACCCTTCCTTCATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp GCTCTGGAATGCACATCCGCGAAGACCCTTGCCATCTaGTCAGAAGCCATGAAGGAAGGGTCTCTTGGTTGC +
Preference number: 6 (lower is better)
Translates to: ALECTSAKTLAI*SEAMKEGSLGC
Trigger: GCAACCAAGAGACCCTTCCTTCATGGCTTCTGATCAGATGGCAAGGGTCTTCGCGGATGTGCATTCCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 72 bp ATCTCCTTGTCGTTAGCGAAAACCTCTAGGGAGAGCTaGCACTTGGCATTGTGGCGGCATAAGGACTCACGG +
Preference number: 6 (lower is better)
Translates to: ISLSLAKTSRES*HLALWRHKDSR
Trigger: CCGTGAGTCCTTATGCCGCCACAATGCCAAGTGCCAGCTCTCCCTAGAGGTTTTCGCTAACGACAAGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp TTGTCGTTAGCGAAAACCTCTAGGGAGAGCTGGCACTaGGCATTGTGGCGGCATAAGGACTCACGGTCGATG +
Preference number: 6 (lower is better)
Translates to: LSLAKTSRESWH*ALWRHKDSRSM
Trigger: CATCGACCGTGAGTCCTTATGCCGCCACAATGCCAAGTGCCAGCTCTCCCTAGAGGTTTTCGCTAACGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp GCGTTATCGTTCCGGTCGATAAGCTTGACTGTGACCTaGCAGTGGGCTGGGATTGGGTTAGGTCCTAGGTCT +
Preference number: 6 (lower is better)
Translates to: ALSFRSISLTVT*QWAGIGLGPRS
Trigger: AGACCTAGGACCTAACCCAATCCCAGCCCACTGCAAGGTCACAGTCAAGCTTATCGACCGGAACGATAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp CAAATCTCCTTGTCGTTAGCGAAAACCTCTAGGGAGAGCTGGCACTaGGCATTGTGGCGGCATAAGGACTCACGGTCGATGCGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: QISLSLAKTSRESWH*ALWRHKDSRSMRCL
Trigger: CAAACAGCGCATCGACCGTGAGTCCTTATGCCGCCACAATGCCAAGTGCCAGCTCTCCCTAGAGGTTTTCGCTAACGACAAGGAGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp CCCGAGGTATTCTCCTGGAATGTTGTTCTCGTGTACTaGGAGCACGTAAAGTCCTTTGGTGAACCGAGGCGG +
Preference number: 6 (lower is better)
Translates to: PEVFSWNVVLVY*EHVKSFGEPRR
Trigger: CCGCCTCGGTTCACCAAAGGACTTTACGTGCTCCAAGTACACGAGAACAACATTCCAGGAGAATACCTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp TCATTCTGTAGCGTGGGAAGCACAATCACTGGAGCGTaGTCGTTCACGTCTAAAACCGTCACCCTCACCGTG +
Preference number: 6 (lower is better)
Translates to: SFCSVGSTITGA*SFTSKTVTLTV
Trigger: CACGGTGAGGGTGACGGTTTTAGACGTGAACGACAACGCTCCAGTGATTGTGCTTCCCACGCTACAGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp TCGGGCAGTTCCACCAAGTATGACGGAGCCTCGAAGACTGGACTGTaGTCATTGGAATCGATCACCTTCACATTGATCTGTACGGTGGCG +
Preference number: 6 (lower is better)
Translates to: SGSSTKYDGASKTGL*SLESITFTLICTVA
Trigger: CGCCACCGTACAGATCAATGTGAAGGTGATCGATTCCAATGACAACAGTCCAGTCTTCGAGGCTCCGTCATACTTGGTGGAACTGCCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp AGTTCCACCAAGTATGACGGAGCCTCGAAGACTGGACTGTTGTCATaGGAATCGATCACCTTCACATTGATCTGTACGGTGGCGGAGCGT +
Preference number: 6 (lower is better)
Translates to: SSTKYDGASKTGLLS*ESITFTLICTVAER
Trigger: ACGCTCCGCCACCGTACAGATCAATGTGAAGGTGATCGATTCCAATGACAACAGTCCAGTCTTCGAGGCTCCGTCATACTTGGTGGAACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 72 bp GGTCACATTGTACTCGTCTTGTGTCTCACGGTCCAGTaGACGGTCAGTCACCACGGTATAGAAGTTGTCATA +
Preference number: 6 (lower is better)
Translates to: GHIVLVLCLTVQ*TVSHHGIEVVI
Trigger: TATGACAACTTCTATACCGTGGTGACTGACCGTCCACTGGACCGTGAGACACAAGACGAGTACAATGTGACC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp GCTGCAGGGAACTGTGGCATCCAACACCTATCAGAATaGCCAAGCACTCGGCATTCATCTGTGCAATTAATG +
Preference number: 6 (lower is better)
Translates to: AAGNCGIQHLSE*PSTRHSSVQLM
Trigger: CATTAATTGCACAGATGAATGCCGAGTGCTTGGTCATTCTGATAGGTGTTGGATGCCACAGTTCCCTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 72 bp AGAGATTTGTGCGGTAATCTGCATTTTCAGCCTGATTaGCTGCAGGGAACTGTGGCATCCAACACCTATCAG +
Preference number: 6 (lower is better)
Translates to: RDLCGNLHFQPD*LQGTVASNTYQ
Trigger: CTGATAGGTGTTGGATGCCACAGTTCCCTGCAGCCAATCAGGCTGAAAATGCAGATTACCGCACAAATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp ATGTCCTGGATCTCTACCTTGATCATGCAAATCTCCTaGTCGTTAGCGAAAACCTCTAGGGAGAGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: MSWISTLIMQIS*SLAKTSRESWH
Trigger: GTGCCAGCTCTCCCTAGAGGTTTTCGCTAACGACAAGGAGATTTGCATGATCAAGGTAGAGATCCAGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 90 bp TTGTCGTTGATGTCCTGGATCTCTACCTTGATCATGCAAATCTCCTaGTCGTTAGCGAAAACCTCTAGGGAGAGCTGGCACTTGGCATTG +
Preference number: 6 (lower is better)
Translates to: LSLMSWISTLIMQIS*SLAKTSRESWHLAL
Trigger: CAATGCCAAGTGCCAGCTCTCCCTAGAGGTTTTCGCTAACGACAAGGAGATTTGCATGATCAAGGTAGAGATCCAGGACATCAACGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp TGTTCTCGTGTACTTGGAGCACGTAAAGTCCTTTGGTaGACCGAGGCGGATTGTCATTCTCATCCAGAATCT +
Preference number: 6 (lower is better)
Translates to: CSRVLGARKVLW*TEADCHSHPES
Trigger: AGATTCTGGATGAGAATGACAATCCGCCTCGGTTCACCAAAGGACTTTACGTGCTCCAAGTACACGAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp ATGACGTTCATGGCGTTCCTCTCCTCCACCTCGCTCTaGACCAGCATGATATCGTTTTTGTTGATTTTCTTC +
Preference number: 6 (lower is better)
Translates to: MTFMAFLSSTSL*TSMISFLLIFF
Trigger: GAAGAAAATCAACAAAAACGATATCATGCTGGTGCAGAGCGAGGTGGAGGAGAGGAACGCCATGAACGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS GCA 72 bp ATTTGTGCGGTAATCTGCATTTTCAGCCTGATTGGCTaGAGGGAACTGTGGCATCCAACACCTATCAGAATG +
Preference number: 6 (lower is better)
Translates to: ICAVICIFSLIG*RELWHPTPIRM
Trigger: CATTCTGATAGGTGTTGGATGCCACAGTTCCCTGCAGCCAATCAGGCTGAAAATGCAGATTACCGCACAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CAA 72 bp AAGTATGACGGAGCCTCGAAGACTGGACTGTTGTCATaGGAATCGATCACCTTCACATTGATCTGTACGGTG +
Preference number: 6 (lower is better)
Translates to: KYDGASKTGLLS*ESITFTLICTV
Trigger: CACCGTACAGATCAATGTGAAGGTGATCGATTCCAATGACAACAGTCCAGTCTTCGAGGCTCCGTCATACTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS CCA 72 bp TACTTTGAACAAACTGCTGCCTGCTGCCCATGTAATTaGGCTCTGCGGGAAAATTGTCTGTCTGAATTATGG +
Preference number: 6 (lower is better)
Translates to: YFEQTAACCPCN*ALRENCLSELW
Trigger: CCATAATTCAGACAGACAATTTTCCCGCAGAGCCCAATTACATGGGCAGCAGGCAGCAGTTTGTTCAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp CTCTTCTGGTTCTTGTTCGAGTGGCTGACTTTTAGTTaGAGTAGTTTTCATCTTGAGTGCCTCCCTAACCGA +
Preference number: 6 (lower is better)
Translates to: LFWFLFEWLTFS*SSFHLECLPNR
Trigger: TCGGTTAGGGAGGCACTCAAGATGAAAACTACTTCAACTAAAAGTCAGCCACTCGAACAAGAACCAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7
CDS TCA 72 bp CAATTAATGCACTCTTCTGGTTCTTGTTCGAGTGGCTaGCTTTTAGTTGAAGTAGTTTTCATCTTGAGTGCC +
Preference number: 6 (lower is better)
Translates to: QLMHSSGSCSSG*LLVEVVFILSA
Trigger: GGCACTCAAGATGAAAACTACTTCAACTAAAAGTCAGCCACTCGAACAAGAACCAGAAGAGTGCATTAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000071370.7