Pregenerated sensors for PCDH12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024440Ensembl transcript IDs: ENSMUST00000025311.8, ENSMUST00000194012.2
Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TCCTCATCTGTAAGATGGAATAACATCACTGCATTCCAAAGTGTGTaGCTGTCACCAGCCCGAGGTGGCACCAGCCCGGCTGGCCTGTCT | + |
Preference number: 1 (lower is better) Translates to: SSSVRWNNITAFQSV*LSPARGGTSPAGLS Trigger: AGACAGGCCAGCCGGGCTGGTGCCACCTCGGGCTGGTGACAGTCACACACTTTGGAATGCAGTGATGTTATTCCATCTTACAGATGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR GCA 90 bp | TCCCTGTTGTCCGTAAAGCTCAGCCACGCAGACCATTACAAGGTCTaGCCTAGTCAGTTGCTTGGTAGTCCTGGACTCCTGCTTCCTCTG | + |
Preference number: 1 (lower is better) Translates to: SLLSVKLSHADHYKV*PSQLLGSPGLLLPL Trigger: CAGAGGAAGCAGGAGTCCAGGACTACCAAGCAACTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTTTACGGACAACAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR CCA 90 bp | GTGAGCTGCAGTTTTCCCTTTATTAGTAGGTCAGAAGGCATTGCCTaGCTCTTCCAAGAGCCCACCCTCGGCCTTCAGTGTCCAGTGAGG | + |
Preference number: 1 (lower is better) Translates to: VSCSFPFISRSEGIA*LFQEPTLGLQCPVR Trigger: CCTCACTGGACACTGAAGGCCGAGGGTGGGCTCTTGGAAGAGCCAGGCAATGCCTTCTGACCTACTAATAAAGGGAAAACTGCAGCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR TCA 90 bp | TCCAGTGCCATGGTTGATGACATGGGCTTTGGCTTTGGGCCAGCCTaGGCACAAATCCTGAGTCTGCCTCTACTCCTTGCTCAATCTTGG | + |
Preference number: 1 (lower is better) Translates to: SSAMVDDMGFGFGPA*AQILSLPLLLAQSW Trigger: CCAAGATTGAGCAAGGAGTAGAGGCAGACTCAGGATTTGTGCTCAGGCTGGCCCAAAGCCAAAGCCCATGTCATCAACCATGGCACTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR CCA 90 bp | CTACTGTATGCACAAGAAGGGCTGCTCCCTGGAAAAGGAAGGGACTaGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGA | + |
Preference number: 1 (lower is better) Translates to: LLYAQEGLLPGKGRD*DWADASSFYPVLVR Trigger: TCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCTTCCTTTTCCAGGGAGCAGCCCTTCTTGTGCATACAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR TCA 90 bp | GAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGACTAATTCGGAACTaGGTGTCTTCTGTCTGCAAGTCTTCATCTCAGGGACTTTTCCTC | + |
Preference number: 1 (lower is better) Translates to: ELLLPCACKSGLIRN*VSSVCKSSSQGLFL Trigger: GAGGAAAAGTCCCTGAGATGAAGACTTGCAGACAGAAGACACTCAGTTCCGAATTAGTCCGCTCTTACAAGCACAGGGTAAAAGGAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR TCA 90 bp | CAGCATAGCATAAGTTGCCCTAAAGTTAGGGATATCTCTGTCCAATaGATTCCACAAATTTTAAAAACCAGCTTATTCCCTGAGATCCTC | + |
Preference number: 1 (lower is better) Translates to: QHSISCPKVRDISVQ*IPQILKTSLFPEIL Trigger: GAGGATCTCAGGGAATAAGCTGGTTTTTAAAATTTGTGGAATTCATTGGACAGAGATATCCCTAACTTTAGGGCAACTTATGCTATGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR TCA 90 bp | AGGGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGGTATCTGTTCCTCCTaGGGGCCACCTCTTTATGTG | + |
Preference number: 2 (lower is better) Translates to: RDWDWADASSFYPVLVRAGICSS*GPPLYV Trigger: CACATAAAGAGGTGGCCCTCAGGAGGAACAGATACC...CGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR TCA 90 bp | TTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCCTGCCGATAGAGGGTATCTGTTCCTCCTaGGGGCCACCTCTTTATGTG | + |
Preference number: 2 (lower is better) Translates to: FTHHPLGPQFTDPSLPIEGICSS*GPPLYV Trigger: CACATAAAGAGGTGGCCCTCAGGAGGAACAGATACC...CTCTATCGGCAGGCTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR GCA 90 bp | TTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCCTGCCGATAGAGGTAGTCCTGGACTCCTaGTTCCTCTGTGAGGAACAG | + |
Preference number: 2 (lower is better) Translates to: FTHHPLGPQFTDPSLPIEVVLDS*FLCEEQ Trigger: CTGTTCCTCACAGAGGAAGCAGGAGTCCAGGACTAC...CTCTATCGGCAGGCTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR TCA 90 bp | GGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGATCACTCCAAACAGAGTaGGCTGCAGTTTTCCCTTTA | + |
Preference number: 2 (lower is better) Translates to: GLGLGRCELLLPCACKSGSLQTE*AAVFPL Trigger: TAAAGGGAAAACTGCAGCTCACTCTGTTTGGAGTGA...TCCGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR CCA 90 bp | AGGGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGGATACTACACTTTGTaGTATCTGTTCCTCCTGAGG | + |
Preference number: 2 (lower is better) Translates to: RDWDWADASSFYPVLVRAGYYTL*YLFLLR Trigger: CCTCAGGAGGAACAGATACCACAAAGTGTAGTATCC...CGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR CCA 90 bp | TTTCTAGTTCTAGTTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGGGAAAAGGAAGGGACTaGGACTGGGCAGATGCGAGC | + |
Preference number: 2 (lower is better) Translates to: FLVLVHTPSSGASIHRPKGKGRD*DWADAS Trigger: GCTCGCATCTGCCCAGTCCCAGTCCCTTCCTTTTCC...CTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAACTAGAACTAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR TCA 90 bp | TTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCCTGCCGATAGAGTCACTCCAAACAGAGTaGGCTGCAGTTTTCCCTTTA | + |
Preference number: 2 (lower is better) Translates to: FTHHPLGPQFTDPSLPIESLQTE*AAVFPL Trigger: TAAAGGGAAAACTGCAGCTCACTCTGTTTGGAGTGA...CTCTATCGGCAGGCTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR TCA 90 bp | GGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGACCTGTAAAATGGGTATaGAAATACTACCGACCTAGC | + |
Preference number: 2 (lower is better) Translates to: GLGLGRCELLLPCACKSGPVKWV*KYYRPS Trigger: GCTAGGTCGGTAGTATTTTCATACCCATTTTACAGG...TCCGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR TCA 90 bp | TTTCTAGTTCTAGTTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCCTGAGCACAAATCCTaGGTCTGCCTCTACTCCTTG | + |
Preference number: 2 (lower is better) Translates to: FLVLVHTPSSGASIHRPKPEHKS*VCLYSL Trigger: CAAGGAGTAGAGGCAGACTCAGGATTTGTGCTCAGG...CTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAACTAGAACTAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR TCA 90 bp | GGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGACCTGATTTTTCTAGCTaGGATGCATATTGTTGGATA | + |
Preference number: 2 (lower is better) Translates to: GLGLGRCELLLPCACKSGPDFSS*DAYCWI Trigger: TATCCAACAATATGCATCTCAGCTAGAAAAATCAGG...TCCGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR GCA 90 bp | GGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGACCAACAAGAGTTTCATaGCAGGAATTTGATGACAAA | + |
Preference number: 2 (lower is better) Translates to: GLGLGRCELLLPCACKSGPTRVS*QEFDDK Trigger: TTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGG...TCCGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR TCA 90 bp | AAGTCTTCATCTCAGGGACTTTTCCTCTTCCGTTCCTTTGTTTGCAATCCAGTGCACTTCAAACCAGTGTaGCCCATGCCTGTCATGACC | + |
Preference number: 2 (lower is better) Translates to: KSSSQGLFLFRSFVCNPVHFKPV*PMPVMT Trigger: GGTCATGACAGGCATGGGTCACACTGGTTTGAAGTG...CACTGGATTGCAAACAAAGGAACGGAAGAGGAAAAGTCCCTGAGATGAAGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR GCA 90 bp | AGGGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGCTTTATGTGTTTTACTaGAAACTCCTAGGAGTGAAA | + |
Preference number: 2 (lower is better) Translates to: RDWDWADASSFYPVLVRALYVFY*KLLGVK Trigger: TTTCACTCCTAGGAGTTTGCAGTAAAACACATAAAG...CGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR CCA 90 bp | TTCGGAACTGAGTGTCTTCTGTCTGCAAGTCTTCATCTCAGGGACTTTTCCTCTTGCAATCCAGTGCCATaGTTGATGACATGGGCTTTG | + |
Preference number: 2 (lower is better) Translates to: FGTECLLSASLHLRDFSSCNPVP*LMTWAL Trigger: CAAAGCCCATGTCATCAACCATGGCACTGGATTGCA...AGAGGAAAAGTCCCTGAGATGAAGACTTGCAGACAGAAGACACTCAGTTCCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR TCA 90 bp | TTCGGAACTGAGTGTCTTCTGTCTGCAAGTCTTCATCTCAGGGACTTTTCCTCTCCTGTAAAATGGGTATaGAAATACTACCGACCTAGC | + |
Preference number: 2 (lower is better) Translates to: FGTECLLSASLHLRDFSSPVKWV*KYYRPS Trigger: GCTAGGTCGGTAGTATTTTCATACCCATTTTACAGG...AGAGGAAAAGTCCCTGAGATGAAGACTTGCAGACAGAAGACACTCAGTTCCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR CCA 72 bp | GCACAAGAAGGGCTGCTCCCTGGAAAAGGAAGGGACTaGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTG | + |
Preference number: 3 (lower is better) Translates to: AQEGLLPGKGRD*DWADASSFYPV Trigger: CACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCTTCCTTTTCCAGGGAGCAGCCCTTCTTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR CAA 90 bp | GGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGATTGATGACATGGGCTTaGGCTTTGGGCCAGCCTGAG | + |
Preference number: 3 (lower is better) Translates to: GLGLGRCELLLPCACKSGLMTWA*ALGQPE Trigger: CTCAGGCTGGCCCAAAGCCAAAGCCCATGTCATCAA...TCCGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR CCA 72 bp | GGTAAGACTACTGTATGCACAAGAAGGGCTGCTCCCTaGAAAAGGAAGGGACTGGGACTGGGCAGATGCGAG | + |
Preference number: 3 (lower is better) Translates to: GKTTVCTRRAAP*KRKGLGLGRCE Trigger: CTCGCATCTGCCCAGTCCCAGTCCCTTCCTTTTCCAGGGAGCAGCCCTTCTTGTGCATACAGTAGTCTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR TCA 72 bp | GTAAGATGGAATAACATCACTGCATTCCAAAGTGTGTaGCTGTCACCAGCCCGAGGTGGCACCAGCCCGGCT | + |
Preference number: 3 (lower is better) Translates to: VRWNNITAFQSV*LSPARGGTSPA Trigger: AGCCGGGCTGGTGCCACCTCGGGCTGGTGACAGTCACACACTTTGGAATGCAGTGATGTTATTCCATCTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR TCA 72 bp | CTACGTAAGATGGAGCTCCTGCTTGCTTGGTTCTCATaGCCTCTCTCAGTGGCCTGGAACCCAACAGCTCTG | + |
Preference number: 3 (lower is better) Translates to: LRKMELLLAWFS*PLSVAWNPTAL Trigger: CAGAGCTGTTGGGTTCCAGGCCACTGAGAGAGGTCATGAGAACCAAGCAAGCAGGAGCTCCATCTTACGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR GCA 72 bp | AAACCAGCTTATTCCCTGAGATCCTCAAGACCCGAGTaGCCTAACATTTCCCAGGGGACCCAGGTCCTGGAT | + |
Preference number: 3 (lower is better) Translates to: KPAYSLRSSRPE*PNISQGTQVLD Trigger: ATCCAGGACCTGGGTCCCCTGGGAAATGTTAGGGCACTCGGGTCTTGAGGATCTCAGGGAATAAGCTGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR GCA 72 bp | TCCGTAAAGCTCAGCCACGCAGACCATTACAAGGTCTaGCCTAGTCAGTTGCTTGGTAGTCCTGGACTCCTG | + |
Preference number: 3 (lower is better) Translates to: SVKLSHADHYKV*PSQLLGSPGLL Trigger: CAGGAGTCCAGGACTACCAAGCAACTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTTTACGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR CAA 90 bp | GGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGAACTCCTTGCTCAATCTaGGGGAAGAACCCTCAATGT | + |
Preference number: 3 (lower is better) Translates to: GLGLGRCELLLPCACKSGTPCSI*GKNPQC Trigger: ACATTGAGGGTTCTTCCCCAAGATTGAGCAAGGAGT...TCCGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR TCA 72 bp | ATGGTTGATGACATGGGCTTTGGCTTTGGGCCAGCCTaGGCACAAATCCTGAGTCTGCCTCTACTCCTTGCT | + |
Preference number: 3 (lower is better) Translates to: MVDDMGFGFGPA*AQILSLPLLLA Trigger: AGCAAGGAGTAGAGGCAGACTCAGGATTTGTGCTCAGGCTGGCCCAAAGCCAAAGCCCATGTCATCAACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR CCA 72 bp | CAACAAGTGTTTCAAGTGTCACCTGTGCCAGGCACCTaGCTACGTAAGATGGAGCTCCTGCTTGCTTGGTTC | + |
Preference number: 3 (lower is better) Translates to: QQVFQVSPVPGT*LRKMELLLAWF Trigger: GAACCAAGCAAGCAGGAGCTCCATCTTACGTAGCCAGGTGCCTGGCACAGGTGACACTTGAAACACTTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR CAA 90 bp | CTGTTCCTCCTGAGGGCCACCTCTTTATGTGTTTTACTGCAAACTCCTAGGAGTGCCCTAGTCAGTTGCTaGGTAGTCCTGGACTCCTGC | + |
Preference number: 3 (lower is better) Translates to: LFLLRATSLCVLLQTPRSALVSC*VVLDSC Trigger: GCAGGAGTCCAGGACTACCAAGCAACTGACTAGGGC...ACTCCTAGGAGTTTGCAGTAAAACACATAAAGAGGTGGCCCTCAGGAGGAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR CAA 90 bp | TTTCTAGTTCTAGTTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGTTGATGACATGGGCTTaGGCTTTGGGCCAGCCTGAG | + |
Preference number: 3 (lower is better) Translates to: FLVLVHTPSSGASIHRPKLMTWA*ALGQPE Trigger: CTCAGGCTGGCCCAAAGCCAAAGCCCATGTCATCAA...CTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAACTAGAACTAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR TCA 72 bp | CGCAGGTCTTACAAGATCACCCTGACCGGAGTGAGGTaGTCAGAGACTCAGACCTTGCCTCTGAAAATGCTT | + |
Preference number: 3 (lower is better) Translates to: RRSYKITLTGVR*SETQTLPLKML Trigger: AAGCATTTTCAGAGGCAAGGTCTGAGTCTCTGATCACCTCACTCCGGTCAGGGTGATCTTGTAAGACCTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR GCA 72 bp | TCTGCCCTAGTCAGTTGCTTGGTAGTCCTGGACTCCTaGTTCCTCTGTGAGGAACAGCATAGCATAAGTTGC | + |
Preference number: 3 (lower is better) Translates to: SALVSCLVVLDS*FLCEEQHSISC Trigger: GCAACTTATGCTATGCTGTTCCTCACAGAGGAAGCAGGAGTCCAGGACTACCAAGCAACTGACTAGGGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR CAA 90 bp | TTCGGAACTGAGTGTCTTCTGTCTGCAAGTCTTCATCTCAGGGACTTTTCCTCTGTAGGTCAGAAGGCATaGCCTGGCTCTTCCAAGAGC | + |
Preference number: 3 (lower is better) Translates to: FGTECLLSASLHLRDFSSVGQKA*PGSSKS Trigger: GCTCTTGGAAGAGCCAGGCAATGCCTTCTGACCTAC...AGAGGAAAAGTCCCTGAGATGAAGACTTGCAGACAGAAGACACTCAGTTCCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR TCA 72 bp | GTCCATCGTCTGCGTACCTGTCACTTCAAACCAGTGTaGCCCATGCCTGTCATGACCCAACAAGAGTTTCAT | + |
Preference number: 3 (lower is better) Translates to: VHRLRTCHFKPV*PMPVMTQQEFH Trigger: ATGAAACTCTTGTTGGGTCATGACAGGCATGGGTCACACTGGTTTGAAGTGACAGGTACGCAGACGATGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR GCA 72 bp | ATGTATCAACTCAACAAGTGTTTCAAGTGTCACCTGTaGCAGGCACCTGGCTACGTAAGATGGAGCTCCTGC | + |
Preference number: 3 (lower is better) Translates to: MYQLNKCFKCHL*QAPGYVRWSSC Trigger: GCAGGAGCTCCATCTTACGTAGCCAGGTGCCTGGCACAGGTGACACTTGAAACACTTGTTGAGTTGATACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR CCA 72 bp | GTGAGGCCATCCCTCTGCTTAGGATACTACACTTTGTaGTATCTGTTCCTCCTGAGGGCCACCTCTTTATGT | + |
Preference number: 3 (lower is better) Translates to: VRPSLCLGYYTL*YLFLLRATSLC Trigger: ACATAAAGAGGTGGCCCTCAGGAGGAACAGATACCACAAAGTGTAGTATCCTAAGCAGAGGGATGGCCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR CAA 90 bp | GTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGCTCTCACGTAGGTCAGAAGGCATaGCCTGGCTCTTCCAAGAGC | + |
Preference number: 3 (lower is better) Translates to: VMTQQEFHARNLMTNSSHVGQKA*PGSSKS Trigger: GCTCTTGGAAGAGCCAGGCAATGCCTTCTGACCTAC...GTGAGAGCTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR CAA 90 bp | TTTCTAGTTCTAGTTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGGTCTGCCTCTACTCCTaGCTCAATCTTGGGGAAGAA | + |
Preference number: 3 (lower is better) Translates to: FLVLVHTPSSGASIHRPKVCLYS*LNLGEE Trigger: TTCTTCCCCAAGATTGAGCAAGGAGTAGAGGCAGAC...CTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAACTAGAACTAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR CCA 72 bp | CAAATCCTGAGTCTGCCTCTACTCCTTGCTCAATCTTaGGGAAGAACCCTCAATGTTCCCAAGCTTCATTCC | + |
Preference number: 3 (lower is better) Translates to: QILSLPLLLAQS*GRTLNVPKLHS Trigger: GGAATGAAGCTTGGGAACATTGAGGGTTCTTCCCCAAGATTGAGCAAGGAGTAGAGGCAGACTCAGGATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR TCA 72 bp | TCAATGTTCCCAAGCTTCATTCCTGTAAAATGGGTATaGAAATACTACCGACCTAGCACTGGGCAGGGCTGG | + |
Preference number: 3 (lower is better) Translates to: SMFPSFIPVKWV*KYYRPSTGQGW Trigger: CCAGCCCTGCCCAGTGCTAGGTCGGTAGTATTTTCATACCCATTTTACAGGAATGAAGCTTGGGAACATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR TCA 72 bp | TTACCCTGTGCTTGTAAGAGCGGACTAATTCGGAACTaGGTGTCTTCTGTCTGCAAGTCTTCATCTCAGGGA | + |
Preference number: 3 (lower is better) Translates to: LPCACKSGLIRN*VSSVCKSSSQG Trigger: TCCCTGAGATGAAGACTTGCAGACAGAAGACACTCAGTTCCGAATTAGTCCGCTCTTACAAGCACAGGGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR GCA 72 bp | GTGACCCATGCCTGTCATGACCCAACAAGAGTTTCATaGCAGGAATTTGATGACAAACAGCTCTCACTCCAA | + |
Preference number: 3 (lower is better) Translates to: VTHACHDPTRVS*QEFDDKQLSLQ Trigger: TTGGAGTGAGAGCTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGACAGGCATGGGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR GCA 72 bp | TCATCTCAGGGACTTTTCCTCTTCCGTTCCTTTGTTTaGAATCCAGTGCCATGGTTGATGACATGGGCTTTG | + |
Preference number: 3 (lower is better) Translates to: SSQGLFLFRSFV*NPVPWLMTWAL Trigger: CAAAGCCCATGTCATCAACCATGGCACTGGATTGCAAACAAAGGAACGGAAGAGGAAAAGTCCCTGAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR CAA 90 bp | TTTCTAGTTCTAGTTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGTTTCATGCCAGGAATTaGATGACAAACAGCTCTCAC | + |
Preference number: 3 (lower is better) Translates to: FLVLVHTPSSGASIHRPKFHARN*MTNSSH Trigger: GTGAGAGCTGTTTGTCATCAAATTCCTGGCATGAAA...CTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAACTAGAACTAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR-3UTR CAA 90 bp | AAGTCTTCATCTCAGGGACTTTTCCTCTTCCGTTCCTTTGTTTGCAATCCAGTGTTTCATGCCAGGAATTaGATGACAAACAGCTCTCAC | + |
Preference number: 3 (lower is better) Translates to: KSSSQGLFLFRSFVCNPVFHARN*MTNSSH Trigger: GTGAGAGCTGTTTGTCATCAAATTCCTGGCATGAAA...CACTGGATTGCAAACAAAGGAACGGAAGAGGAAAAGTCCCTGAGATGAAGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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3UTR TCA 72 bp | ATGAATTCCACAAATTTTAAAAACCAGCTTATTCCCTaGGATCCTCAAGACCCGAGTGCCCTAACATTTCCC | + |
Preference number: 3 (lower is better) Translates to: MNSTNFKNQLIP*DPQDPSALTFP Trigger: GGGAAATGTTAGGGCACTCGGGTCTTGAGGATCTCAGGGAATAAGCTGGTTTTTAAAATTTGTGGAATTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS-3UTR CCA 90 bp | GGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGACCGAGACGAAAGTGCTaGCCAGGCGCGTGCCTGTTG | + |
Preference number: 4 (lower is better) Translates to: GLGLGRCELLLPCACKSGPRRKC*PGACLL Trigger: CAACAGGCACGCGCCTGGCCAGCACTTTCGTCTCGG...TCCGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS-3UTR TCA 90 bp | GGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGAGGTGGTGAGGGGCAATaGCAATCTCGCCATCCAGGC | + |
Preference number: 4 (lower is better) Translates to: GLGLGRCELLLPCACKSGGGEGQ*QSRHPG Trigger: GCCTGGATGGCGAGATTGTCATTGCCCCTCACCACC...TCCGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | AGGGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGAAGGAGGGGCTGCCCTaGTCCTCTACCACTATCCCC | + |
Preference number: 4 (lower is better) Translates to: RDWDWADASSFYPVLVRAKEGLP*SSTTIP Trigger: GGGGATAGTGGTAGAGGACCAGGGCAGCCCCTCCTT...CGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | AGGGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGATGCGAGCTGGGGTTaGCCTCTGTCCTCTGCTATC | + |
Preference number: 4 (lower is better) Translates to: RDWDWADASSFYPVLVRADASWG*PLSSAI Trigger: GATAGCAGAGGACAGAGGGCAACCCCAGCTCGCATC...CGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | AGGGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGATGCTGGATGCGAGCTaGGGTTGCCCTCTGTCCTCT | + |
Preference number: 4 (lower is better) Translates to: RDWDWADASSFYPVLVRAMLDAS*GCPLSS Trigger: AGAGGACAGAGGGCAACCCCAGCTCGCATCCAGCAT...CGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | TTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCCTGCCGATAGAGTGGGGCCTCTTGGGCTaGTGGCGGTATGACGACTCA | + |
Preference number: 4 (lower is better) Translates to: FTHHPLGPQFTDPSLPIEWGLLG*WRYDDS Trigger: TGAGTCGTCATACCGCCACCAGCCCAAGAGGCCCCA...CTCTATCGGCAGGCTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | GGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGATCCTGCAGTACCTCCTaGCTCTCTGCCAGTTCTCCC | + |
Preference number: 4 (lower is better) Translates to: GLGLGRCELLLPCACKSGSCSTS*LSASSP Trigger: GGGAGAACTGGCAGAGAGCCAGGAGGTACTGCAGGA...TCCGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | TTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCCTGCCGATAGAGGCCTCCTCCTTGTCTTaGTCTCCAGTCGCCCTCGCT | + |
Preference number: 4 (lower is better) Translates to: FTHHPLGPQFTDPSLPIEASSLS*SPVALA Trigger: AGCGAGGGCGACTGGAGACCAAGACAAGGAGGAGGC...CTCTATCGGCAGGCTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | TTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCCTGCCGATAGAGGGCTGGAATTGGCCCTaGTGCAGCAAGGACAGCAGC | + |
Preference number: 4 (lower is better) Translates to: FTHHPLGPQFTDPSLPIEGWNWP*CSKDSS Trigger: GCTGCTGTCCTTGCTGCACCAGGGCCAATTCCAGCC...CTCTATCGGCAGGCTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | AGGGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGAAGTGGCCCAGCTCTTaGTTCAGCCAACAGTGGACG | + |
Preference number: 4 (lower is better) Translates to: RDWDWADASSFYPVLVRAKWPSS*FSQQWT Trigger: CGTCCACTGTTGGCTGAATCAAGAGCTGGGCCACTT...CGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | AGGGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGCCAGTGTGGCATTGGTaGGCAGCATGTACGTGTTGC | + |
Preference number: 4 (lower is better) Translates to: RDWDWADASSFYPVLVRAPVWHW*AACTCC Trigger: GCAACACGTACATGCTGCTCACCAATGCCACACTGG...CGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | AGGGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGCAAGAGTCCCAGCCTaGCTCCATCAGTGTCTCCTT | + |
Preference number: 4 (lower is better) Translates to: RDWDWADASSFYPVLVRAARVPA*LHQCLL Trigger: AAGGAGACACTGATGGAGGCAGGCTGGGACTCTTGC...CGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | TATTCCCTGAGATCCTCAAGACCCGAGTGCCCTAACATTTCCCAGGGGACCCAGCCAGTTCTCCCTGGTTaGCTTGGTTACGCAGGGTCC | + |
Preference number: 4 (lower is better) Translates to: YSLRSSRPECPNISQGTQPVLPG*LGYAGS Trigger: GGACCCTGCGTAACCAAGGCAACCAGGGAGAACTGG...CTGGGTCCCCTGGGAAATGTTAGGGCACTCGGGTCTTGAGGATCTCAGGGAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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3UTR CAA 72 bp | TGCCAGGCACCTGGCTACGTAAGATGGAGCTCCTGCTaGCTTGGTTCTCATGACCTCTCTCAGTGGCCTGGA | + |
Preference number: 4 (lower is better) Translates to: CQAPGYVRWSSC*LGSHDLSQWPG Trigger: TCCAGGCCACTGAGAGAGGTCATGAGAACCAAGCAAGCAGGAGCTCCATCTTACGTAGCCAGGTGCCTGGCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS-3UTR TCA 90 bp | TCTGCCCTAGTCAGTTGCTTGGTAGTCCTGGACTCCTGCTTCCTCTGTGAGGAAGGGCTTGGCGCAGAATaGTCTGGCCTGTCTTGGCAT | + |
Preference number: 4 (lower is better) Translates to: SALVSCLVVLDSCFLCEEGLGAE*SGLSWH Trigger: ATGCCAAGACAGGCCAGATCATTCTGCGCCAAGCCC...TTCCTCACAGAGGAAGCAGGAGTCCAGGACTACCAAGCAACTGACTAGGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | GGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGAGGTGGTCCACACTGGTaGCAAACACGACCTTCAATG | + |
Preference number: 4 (lower is better) Translates to: GLGLGRCELLLPCACKSGGGPHW*QTRPSM Trigger: CATTGAAGGTCGTGTTTGTCACCAGTGTGGACCACC...TCCGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | TTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCCTGCCGATAGAGAGGTCAGGTTCTGCTTaGCCACTAGGCTTGAGGCCT | + |
Preference number: 4 (lower is better) Translates to: FTHHPLGPQFTDPSLPIERSGSA*PLGLRP Trigger: AGGCCTCAAGCCTAGTGGTCAAGCAGAACCTGACCT...CTCTATCGGCAGGCTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | TATTCCCTGAGATCCTCAAGACCCGAGTGCCCTAACATTTCCCAGGGGACCCAGGTTTCCCTATCACCGTaGCAGACGGCACTTCCTCTG | + |
Preference number: 4 (lower is better) Translates to: YSLRSSRPECPNISQGTQVSLSP*QTALPL Trigger: CAGAGGAAGTGCCGTCTGGCACGGTGATAGGGAAAC...CTGGGTCCCCTGGGAAATGTTAGGGCACTCGGGTCTTGAGGATCTCAGGGAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | AAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTTGCTTGGTAGTCTGGAAGGCATCTCCTaGCTTCCCACGCCTCTCCTC | + |
Preference number: 4 (lower is better) Translates to: KLSHADHYKVCPSQLLGSLEGIS*LPTPLL Trigger: GAGGAGAGGCGTGGGAAGGCAGGAGATGCCTTCCAG...ACTACCAAGCAACTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | AGGGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGAAGGGGATTCGTGTGTaGAGAGAGGCACTCTCTGAG | + |
Preference number: 4 (lower is better) Translates to: RDWDWADASSFYPVLVRAKGIRV*REALSE Trigger: CTCAGAGAGTGCCTCTCTGCACACACGAATCCCCTT...CGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | TCTGCCCTAGTCAGTTGCTTGGTAGTCCTGGACTCCTGCTTCCTCTGTGAGGAATCTGCAAGGAGGGGCTaGCCTGGTCCTCTACCACTA | + |
Preference number: 4 (lower is better) Translates to: SALVSCLVVLDSCFLCEESARRG*PGPLPL Trigger: TAGTGGTAGAGGACCAGGGCAGCCCCTCCTTGCAGA...TTCCTCACAGAGGAAGCAGGAGTCCAGGACTACCAAGCAACTGACTAGGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | TATTCCCTGAGATCCTCAAGACCCGAGTGCCCTAACATTTCCCAGGGGACCCAGCACTGGGATTCTCAATaGGCAACAGAAGGTGGCCCG | + |
Preference number: 4 (lower is better) Translates to: YSLRSSRPECPNISQGTQHWDSQ*ATEGGP Trigger: CGGGCCACCTTCTGTTGCCCATTGAGAATCCCAGTG...CTGGGTCCCCTGGGAAATGTTAGGGCACTCGGGTCTTGAGGATCTCAGGGAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | AAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTTGCTTGGTAGTGTTTCTGGGGCCTCTTaGGCTGGTGGCGGTATGACG | + |
Preference number: 4 (lower is better) Translates to: KLSHADHYKVCPSQLLGSVSGAS*AGGGMT Trigger: CGTCATACCGCCACCAGCCCAAGAGGCCCCAGAAAC...ACTACCAAGCAACTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | TTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCCTGCCGATAGAGTCTGCCAGTTCTCCCTaGTTGCCTTGGTTACGCAGG | + |
Preference number: 4 (lower is better) Translates to: FTHHPLGPQFTDPSLPIESASSP*LPWLRR Trigger: CCTGCGTAACCAAGGCAACCAGGGAGAACTGGCAGA...CTCTATCGGCAGGCTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | CTGTTCCTCCTGAGGGCCACCTCTTTATGTGTTTTACTGCAAACTCCTAGGAGTATCCCCAGGTCCCACTaGCTCCCGATGAGGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: LFLLRATSLCVLLQTPRSIPRSH*LPMRLL Trigger: CAGCAGCCTCATCGGGAGTCAGTGGGACCTGGGGAT...ACTCCTAGGAGTTTGCAGTAAAACACATAAAGAGGTGGCCCTCAGGAGGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | TTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCCTGCCGATAGAGCTCGGTAATTGGTGGTaGGGGGCAATGACAATCTCG | + |
Preference number: 4 (lower is better) Translates to: FTHHPLGPQFTDPSLPIELGNWW*GAMTIS Trigger: CGAGATTGTCATTGCCCCTCACCACCAATTACCGAG...CTCTATCGGCAGGCTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS-3UTR TCA 90 bp | TTTCTAGTTCTAGTTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGTGGCTAGGTCTAGACTaGGGGTCCTCCCGCACACCG | + |
Preference number: 4 (lower is better) Translates to: FLVLVHTPSSGASIHRPKWLGLD*GSSRTP Trigger: CGGTGTGCGGGAGGACCCTCAGTCTAGACCTAGCCA...CTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAACTAGAACTAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS-3UTR GCA 90 bp | CTGTTGTCCGTAAAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGCATCTGAACCGGCAGTaGCTGAGGCAGCTGCAGAAT | + |
Preference number: 4 (lower is better) Translates to: LLSVKLSHADHYKVCPSQHLNRQ*LRQLQN Trigger: ATTCTGCAGCTGCCTCAGGCACTGCCGGTTCAGATG...CTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTTTACGGACAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | CTGTTGTCCGTAAAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGATTGGCCCCCGAGTCTaGATCCCTAGCCACGATTGT | + |
Preference number: 4 (lower is better) Translates to: LLSVKLSHADHYKVCPSQIGPRV*IPSHDC Trigger: ACAATCGTGGCTAGGGATGCAGACTCGGGGGCCAAT...CTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTTTACGGACAACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | AAGTCTTCATCTCAGGGACTTTTCCTCTTCCGTTCCTTTGTTTGCAATCCAGTGTGCTGGCCAGGCGCGTaGCTGTTGGGCTCAGCTCGG | + |
Preference number: 4 (lower is better) Translates to: KSSSQGLFLFRSFVCNPVCWPGA*LLGSAR Trigger: CCGAGCTGAGCCCAACAGGCACGCGCCTGGCCAGCA...CACTGGATTGCAAACAAAGGAACGGAAGAGGAAAAGTCCCTGAGATGAAGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS-3UTR CCA 90 bp | AGGGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGGTTATTTTCCCAAGTaGAGACCTCGTACCGGCTCT | + |
Preference number: 4 (lower is better) Translates to: RDWDWADASSFYPVLVRAGYFPK*RPRTGS Trigger: AGAGCCGGTACGAGGTCTCCACTTGGGAAAATAACC...CGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | TTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCCTGCCGATAGAGTCTCCCTGGTTGCCTTaGTTACGCAGGGTCCTGTAT | + |
Preference number: 4 (lower is better) Translates to: FTHHPLGPQFTDPSLPIESPWLP*LRRVLY Trigger: ATACAGGACCCTGCGTAACCAAGGCAACCAGGGAGA...CTCTATCGGCAGGCTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | AAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTTGCTTGGTAGTAAGGCCCTCTGTGTCTaGGATGGTACCCCTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: KLSHADHYKVCPSQLLGSKALCV*DGTPAA Trigger: AGCAGCAGGGGTACCATCCCAGACACAGAGGGCCTT...ACTACCAAGCAACTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | TATTCCCTGAGATCCTCAAGACCCGAGTGCCCTAACATTTCCCAGGGGACCCAGGACAATCCCCTGAAATaGACAAGTAGCTTCCTGGCC | + |
Preference number: 4 (lower is better) Translates to: YSLRSSRPECPNISQGTQDNPLK*TSSFLA Trigger: GGCCAGGAAGCTACTTGTTCATTTCAGGGGATTGTC...CTGGGTCCCCTGGGAAATGTTAGGGCACTCGGGTCTTGAGGATCTCAGGGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | TTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCCTGCCGATAGAGCTGTTCATAGTCCAGTaGCCTCTGAGCAGTGACTTC | + |
Preference number: 4 (lower is better) Translates to: FTHHPLGPQFTDPSLPIELFIVQ*PLSSDF Trigger: GAAGTCACTGCTCAGAGGTCACTGGACTATGAACAG...CTCTATCGGCAGGCTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | CTGTTGTCCGTAAAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTGCCACAGCCAAGTCTaGTCTCAGCTGCCTTCTTTC | + |
Preference number: 4 (lower is better) Translates to: LLSVKLSHADHYKVCPSQCHSQV*SQLPSF Trigger: GAAAGAAGGCAGCTGAGAGCAGACTTGGCTGTGGCA...CTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTTTACGGACAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS-3UTR CCA 90 bp | AGGGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGTCTTTGGGAAACTGTaGCTGGTGGTCATTGATGTC | + |
Preference number: 4 (lower is better) Translates to: RDWDWADASSFYPVLVRAVFGKL*LVVIDV Trigger: GACATCAATGACCACCAGCCACAGTTTCCCAAAGAC...CGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | AAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTTGCTTGGTAGTTCAGCTGATAAGGGCTaGGGTCCTTGGTCTTGGGCA | + |
Preference number: 4 (lower is better) Translates to: KLSHADHYKVCPSQLLGSSADKG*GPWSWA Trigger: TGCCCAAGACCAAGGACCCCAGCCCTTATCAGCTGA...ACTACCAAGCAACTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | AAGTCTTCATCTCAGGGACTTTTCCTCTTCCGTTCCTTTGTTTGCAATCCAGTGGGTTGCAGAGGACGCTaGTGGGCTCTGTGGGGCCTC | + |
Preference number: 4 (lower is better) Translates to: KSSSQGLFLFRSFVCNPVGCRGR*WALWGL Trigger: GAGGCCCCACAGAGCCCACCAGCGTCCTCTGCAACC...CACTGGATTGCAAACAAAGGAACGGAAGAGGAAAAGTCCCTGAGATGAAGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | TATTCCCTGAGATCCTCAAGACCCGAGTGCCCTAACATTTCCCAGGGGACCCAGATTTCCTCGGTGGTTTaGTTTGGGCTGGAATTGGCC | + |
Preference number: 4 (lower is better) Translates to: YSLRSSRPECPNISQGTQISSVV*FGLELA Trigger: GGCCAATTCCAGCCCAAACCAAACCACCGAGGAAAT...CTGGGTCCCCTGGGAAATGTTAGGGCACTCGGGTCTTGAGGATCTCAGGGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | GTTTTCCCTTTATTAGTAGGTCAGAAGGCATTGCCTGGCTCTTCCAAGAGCCCACCTGGGAAGATCTTCTaGCACCAGCGACGTCTGGGA | + |
Preference number: 4 (lower is better) Translates to: VFPLLVGQKALPGSSKSPPGKIF*HQRRLG Trigger: TCCCAGACGTCGCTGGTGTCAGAAGATCTTCCCAGG...TGGGCTCTTGGAAGAGCCAGGCAATGCCTTCTGACCTACTAATAAAGGGAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | CTGTTGTCCGTAAAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTCACTGAGCACAGGCTaGATCACTTCTGGGGCATTA | + |
Preference number: 4 (lower is better) Translates to: LLSVKLSHADHYKVCPSQSLSTG*ITSGAL Trigger: TAATGCCCCAGAAGTGATTCAGCCTGTGCTCAGTGA...CTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTTTACGGACAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | AAGTCTTCATCTCAGGGACTTTTCCTCTTCCGTTCCTTTGTTTGCAATCCAGTGTGGCTAGGTCTAGACTaGGGGTCCTCCCGCACACCG | + |
Preference number: 4 (lower is better) Translates to: KSSSQGLFLFRSFVCNPVWLGLD*GSSRTP Trigger: CGGTGTGCGGGAGGACCCTCAGTCTAGACCTAGCCA...CACTGGATTGCAAACAAAGGAACGGAAGAGGAAAAGTCCCTGAGATGAAGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS-3UTR GCA 90 bp | GGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGAGAGATTTCCAGTTCCTaGTCGTCTTTGGGAAACTGT | + |
Preference number: 4 (lower is better) Translates to: GLGLGRCELLLPCACKSGEISSS*SSLGNC Trigger: ACAGTTTCCCAAAGACGAGCAGGAACTGGAAATCTC...TCCGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | AGGGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGCTGTCTTGGCATCTATaGCAAAGGTGTTCATCACCT | + |
Preference number: 4 (lower is better) Translates to: RDWDWADASSFYPVLVRALSWHL*QRCSSP Trigger: AGGTGATGAACACCTTTGGCATAGATGCCAAGACAG...CGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | TCTGCCCTAGTCAGTTGCTTGGTAGTCCTGGACTCCTGCTTCCTCTGTGAGGAAGGAAACTGTGGCTGGTaGTCATTGATGTCTAGCACC | + |
Preference number: 4 (lower is better) Translates to: SALVSCLVVLDSCFLCEEGNCGW*SLMSST Trigger: GGTGCTAGACATCAATGACCACCAGCCACAGTTTCC...TTCCTCACAGAGGAAGCAGGAGTCCAGGACTACCAAGCAACTGACTAGGGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | CTGTTGTCCGTAAAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTTAGGACCCGTGTCTTaGTCAAGAGCTCTGTCCAAG | + |
Preference number: 4 (lower is better) Translates to: LLSVKLSHADHYKVCPSQLGPVS*SRALSK Trigger: CTTGGACAGAGCTCTTGACCAAGACACGGGTCCTAA...CTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTTTACGGACAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | TCTGCCCTAGTCAGTTGCTTGGTAGTCCTGGACTCCTGCTTCCTCTGTGAGGAACAAGCTCTGCATGTTTaGTCTCATCAGGGCCCACAA | + |
Preference number: 4 (lower is better) Translates to: SALVSCLVVLDSCFLCEEQALHV*SHQGPQ Trigger: TTGTGGGCCCTGATGAGACCAAACATGCAGAGCTTG...TTCCTCACAGAGGAAGCAGGAGTCCAGGACTACCAAGCAACTGACTAGGGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | TCTGCCCTAGTCAGTTGCTTGGTAGTCCTGGACTCCTGCTTCCTCTGTGAGGAAACCTTCAATGAAACTTaGGTCTGCAAGGAGGGGCTG | + |
Preference number: 4 (lower is better) Translates to: SALVSCLVVLDSCFLCEETFNET*VCKEGL Trigger: CAGCCCCTCCTTGCAGACCCAAGTTTCATTGAAGGT...TTCCTCACAGAGGAAGCAGGAGTCCAGGACTACCAAGCAACTGACTAGGGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | GTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGCTCTCACCGCTGGTGGGCTCTGTaGGGCCTCCTCCTTGTCTTG | + |
Preference number: 4 (lower is better) Translates to: VMTQQEFHARNLMTNSSHRWWAL*GLLLVL Trigger: CAAGACAAGGAGGAGGCCCCACAGAGCCCACCAGCG...GTGAGAGCTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | AAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTTGCTTGGTAGTAGCAAGGACAGCAGCTaGGAGATTTGCTGGACAGGA | + |
Preference number: 4 (lower is better) Translates to: KLSHADHYKVCPSQLLGSSKDSS*EICWTG Trigger: TCCTGTCCAGCAAATCTCCCAGCTGCTGTCCTTGCT...ACTACCAAGCAACTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | AAGTCTTCATCTCAGGGACTTTTCCTCTTCCGTTCCTTTGTTTGCAATCCAGTGCCGAGACGAAAGTGCTaGCCAGGCGCGTGCCTGTTG | + |
Preference number: 4 (lower is better) Translates to: KSSSQGLFLFRSFVCNPVPRRKC*PGACLL Trigger: CAACAGGCACGCGCCTGGCCAGCACTTTCGTCTCGG...CACTGGATTGCAAACAAAGGAACGGAAGAGGAAAAGTCCCTGAGATGAAGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS-3UTR TCA 90 bp | AAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTTGCTTGGTAGTGTGGCTGGTGGTCATTaGTGTCTAGCACCTGAATCT | + |
Preference number: 4 (lower is better) Translates to: KLSHADHYKVCPSQLLGSVAGGH*CLAPES Trigger: AGATTCAGGTGCTAGACATCAATGACCACCAGCCAC...ACTACCAAGCAACTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | CTGTTGTCCGTAAAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTTGAGCGTGATGAGGTaGAGAGAGGGTGGGTTATTT | + |
Preference number: 4 (lower is better) Translates to: LLSVKLSHADHYKVCPSQLSVMR*REGGLF Trigger: AAATAACCCACCCTCTCTTCACCTCATCACGCTCAA...CTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTTTACGGACAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | GTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGCTCTCACGGGCTGGTGGCGGTATaGCGACTCAGCTTCTCGACA | + |
Preference number: 4 (lower is better) Translates to: VMTQQEFHARNLMTNSSHGLVAV*RLSFST Trigger: TGTCGAGAAGCTGAGTCGTCATACCGCCACCAGCCC...GTGAGAGCTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | TCTGCCCTAGTCAGTTGCTTGGTAGTCCTGGACTCCTGCTTCCTCTGTGAGGAACTGGAACTCAAAGCCTaGCATCTGTTCATAGTCCAG | + |
Preference number: 4 (lower is better) Translates to: SALVSCLVVLDSCFLCEELELKA*HLFIVQ Trigger: CTGGACTATGAACAGATGGCAGGCTTTGAGTTCCAG...TTCCTCACAGAGGAAGCAGGAGTCCAGGACTACCAAGCAACTGACTAGGGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | TCTGCCCTAGTCAGTTGCTTGGTAGTCCTGGACTCCTGCTTCCTCTGTGAGGAATTGCCCTCTGTCCTCTaGTATCACCTGGAACTCAAA | + |
Preference number: 4 (lower is better) Translates to: SALVSCLVVLDSCFLCEELPSVL*YHLELK Trigger: TTTGAGTTCCAGGTGATAGCAGAGGACAGAGGGCAA...TTCCTCACAGAGGAAGCAGGAGTCCAGGACTACCAAGCAACTGACTAGGGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | AAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTTGCTTGGTAGTAAGTCTGCTCTCAGCTaGCTTCTTTCTACCCTGTGC | + |
Preference number: 4 (lower is better) Translates to: KLSHADHYKVCPSQLLGSKSALS*LLSTLC Trigger: GCACAGGGTAGAAAGAAGGCAGCTGAGAGCAGACTT...ACTACCAAGCAACTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS-3UTR CCA 90 bp | GGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGAACTTCCTCTGTCACTTaGAATTTCACCATGACAGTG | + |
Preference number: 4 (lower is better) Translates to: GLGLGRCELLLPCACKSGTSSVT*NFTMTV Trigger: CACTGTCATGGTGAAATTCCAAGTGACAGAGGAAGT...TCCGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | GGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGAACTCTCAGCAAACACTaGACTATTGTCATTGGAGTC | + |
Preference number: 4 (lower is better) Translates to: GLGLGRCELLLPCACKSGTLSKH*TIVIGV Trigger: GACTCCAATGACAATAGTCCAGTGTTTGCTGAGAGT...TCCGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | TTCGGAACTGAGTGTCTTCTGTCTGCAAGTCTTCATCTCAGGGACTTTTCCTCTAGAAGAGTTCCCCATTaGCCCCCGAGTCTGCATCCC | + |
Preference number: 4 (lower is better) Translates to: FGTECLLSASLHLRDFSSRRVPH*PPSLHP Trigger: GGGATGCAGACTCGGGGGCCAATGGGGAACTCTTCT...AGAGGAAAAGTCCCTGAGATGAAGACTTGCAGACAGAAGACACTCAGTTCCGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | GTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGCTCTCACGGCCTCTTGGGCTGGTaGCGGTATGACGACTCAGCT | + |
Preference number: 4 (lower is better) Translates to: VMTQQEFHARNLMTNSSHGLLGW*RYDDSA Trigger: AGCTGAGTCGTCATACCGCCACCAGCCCAAGAGGCC...GTGAGAGCTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | GTTTTCCCTTTATTAGTAGGTCAGAAGGCATTGCCTGGCTCTTCCAAGAGCCCACTCGGTGGTTTGGTTTaGGCTGGAATTGGCCCTGGT | + |
Preference number: 4 (lower is better) Translates to: VFPLLVGQKALPGSSKSPLGGLV*AGIGPG Trigger: ACCAGGGCCAATTCCAGCCCAAACCAAACCACCGAG...TGGGCTCTTGGAAGAGCCAGGCAATGCCTTCTGACCTACTAATAAAGGGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | CTGTTCCTCCTGAGGGCCACCTCTTTATGTGTTTTACTGCAAACTCCTAGGAGTCAGAGAGGCACTCTCTaGGATTTCCAGTTCCTGCTC | + |
Preference number: 4 (lower is better) Translates to: LFLLRATSLCVLLQTPRSQRGTL*DFQFLL Trigger: GAGCAGGAACTGGAAATCTCAGAGAGTGCCTCTCTG...ACTCCTAGGAGTTTGCAGTAAAACACATAAAGAGGTGGCCCTCAGGAGGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | TTTCTAGTTCTAGTTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGGCCCCAAGGAAGGGCTaGGGAAAAAGAGATGAGCAT | + |
Preference number: 4 (lower is better) Translates to: FLVLVHTPSSGASIHRPKAPRKG*GKRDEH Trigger: ATGCTCATCTCTTTTTCCTCAGCCCTTCCTTGGGGC...CTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAACTAGAACTAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | GTTTTCCCTTTATTAGTAGGTCAGAAGGCATTGCCTGGCTCTTCCAAGAGCCCACTCGGTAATTGGTGGTaGGGGGCAATGACAATCTCG | + |
Preference number: 4 (lower is better) Translates to: VFPLLVGQKALPGSSKSPLGNWW*GAMTIS Trigger: CGAGATTGTCATTGCCCCTCACCACCAATTACCGAG...TGGGCTCTTGGAAGAGCCAGGCAATGCCTTCTGACCTACTAATAAAGGGAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS-3UTR GCA 90 bp | GTTTTCCCTTTATTAGTAGGTCAGAAGGCATTGCCTGGCTCTTCCAAGAGCCCACGGGAGGCATTCCTCTaGCTGGGATGGTTAAAGAGA | + |
Preference number: 4 (lower is better) Translates to: VFPLLVGQKALPGSSKSPREAFL*LGWLKR Trigger: TCTCTTTAACCATCCCAGGCAGAGGAATGCCTCCCG...TGGGCTCTTGGAAGAGCCAGGCAATGCCTTCTGACCTACTAATAAAGGGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | CTGTTCCTCCTGAGGGCCACCTCTTTATGTGTTTTACTGCAAACTCCTAGGAGTGTTCCTGCTCGTCTTTaGGAAACTGTGGCTGGTGGT | + |
Preference number: 4 (lower is better) Translates to: LFLLRATSLCVLLQTPRSVPARL*ETVAGG Trigger: ACCACCAGCCACAGTTTCCCAAAGACGAGCAGGAAC...ACTCCTAGGAGTTTGCAGTAAAACACATAAAGAGGTGGCCCTCAGGAGGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | GTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGCTCTCACGGTTTGGGCTGGAATTaGCCCTGGTGCAGCAAGGAC | + |
Preference number: 4 (lower is better) Translates to: VMTQQEFHARNLMTNSSHGLGWN*PWCSKD Trigger: GTCCTTGCTGCACCAGGGCCAATTCCAGCCCAAACC...GTGAGAGCTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | GGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGATATTTATTTCCTCGGTaGTTTGGTTTGGGCTGGAAT | + |
Preference number: 4 (lower is better) Translates to: GLGLGRCELLLPCACKSGYLFPR*FGLGWN Trigger: ATTCCAGCCCAAACCAAACCACCGAGGAAATAAATA...TCCGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | TTCGGAACTGAGTGTCTTCTGTCTGCAAGTCTTCATCTCAGGGACTTTTCCTCTCTTGGAATTTCACCATaGCAGTGGCCACCTCCTGAC | + |
Preference number: 4 (lower is better) Translates to: FGTECLLSASLHLRDFSSLGISP*QWPPPD Trigger: GTCAGGAGGTGGCCACTGTCATGGTGAAATTCCAAG...AGAGGAAAAGTCCCTGAGATGAAGACTTGCAGACAGAAGACACTCAGTTCCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | GTTTTCCCTTTATTAGTAGGTCAGAAGGCATTGCCTGGCTCTTCCAAGAGCCCAGAGACCGTTGTTTCCTaGGTCCAAGTCATTCGCACT | + |
Preference number: 4 (lower is better) Translates to: VFPLLVGQKALPGSSKSPETVVS*VQVIRT Trigger: AGTGCGAATGACTTGGACTCAGGAAACAACGGTCTC...TGGGCTCTTGGAAGAGCCAGGCAATGCCTTCTGACCTACTAATAAAGGGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | CTGTTCCTCCTGAGGGCCACCTCTTTATGTGTTTTACTGCAAACTCCTAGGAGTTGGCTTTGCCTTCACTaGGCACAGGCTGAATCACTT | + |
Preference number: 4 (lower is better) Translates to: LFLLRATSLCVLLQTPRSWLCLH*AQAESL Trigger: AAGTGATTCAGCCTGTGCTCAGTGAAGGCAAAGCCA...ACTCCTAGGAGTTTGCAGTAAAACACATAAAGAGGTGGCCCTCAGGAGGAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | TTTCTAGTTCTAGTTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCACCACCACAAGCTCTaGATGTTTGGTCTCATCAGG | + |
Preference number: 4 (lower is better) Translates to: FLVLVHTPSSGASIHRPKHHHKL*MFGLIR Trigger: CCTGATGAGACCAAACATGCAGAGCTTGTGGTGGTG...CTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAACTAGAACTAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | GTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGCTCTCACAATGAAACTTGGGTCTaGAAGGAGGGGCTGCCCTGG | + |
Preference number: 4 (lower is better) Translates to: VMTQQEFHARNLMTNSSHNETWV*KEGLPW Trigger: CCAGGGCAGCCCCTCCTTGCAGACCCAAGTTTCATT...GTGAGAGCTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | CATGCCTGTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGTCCCCATTGGGTCCTTaGTCGGGATCTGTAGCAGTC | + |
Preference number: 4 (lower is better) Translates to: HACHDPTRVSCQEFDDKQSPLGP*SGSVAV Trigger: GACTGCTACAGATCCCGACCAAGGACCCAATGGGGA...CTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGACAGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | CATGCCTGTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGACTCTACCTCCCCATTaGGTCCTTGGTCGGGATCTG | + |
Preference number: 4 (lower is better) Translates to: HACHDPTRVSCQEFDDKQTLPPH*VLGRDL Trigger: CAGATCCCGACCAAGGACCCAATGGGGAGGTAGAGT...CTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGACAGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | CTGTTCCTCCTGAGGGCCACCTCTTTATGTGTTTTACTGCAAACTCCTAGGAGTGGTGTTCATCACCTCTaGGGACACATGCTTGCCAAA | + |
Preference number: 4 (lower is better) Translates to: LFLLRATSLCVLLQTPRSGVHHL*GHMLAK Trigger: TTTGGCAAGCATGTGTCCCCAGAGGTGATGAACACC...ACTCCTAGGAGTTTGCAGTAAAACACATAAAGAGGTGGCCCTCAGGAGGAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | GTGTTTTACTGCAAACTCCTAGGAGTGAAACAAGCTGTCCCTGTTGTCCGTAAAGGCCTGGGATGGAATTaGGACCCAAATCCCTTGCCT | + |
Preference number: 4 (lower is better) Translates to: VFYCKLLGVKQAVPVVRKGLGWN*DPNPLP Trigger: AGGCAAGGGATTTGGGTCCCAATTCCATCCCAGGCC...TTTACGGACAACAGGGACAGCTTGTTTCACTCCTAGGAGTTTGCAGTAAAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | TTTCTAGTTCTAGTTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGTGGGGTCCTTGGTCTTaGGCAAACACAGTGAGAGTA | + |
Preference number: 4 (lower is better) Translates to: FLVLVHTPSSGASIHRPKWGPWS*ANTVRV Trigger: TACTCTCACTGTGTTTGCCCAAGACCAAGGACCCCA...CTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAACTAGAACTAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | CATGCCTGTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGAAGGGCTGGGGTCCTTaGTCTTGGGCAAACACAGTG | + |
Preference number: 4 (lower is better) Translates to: HACHDPTRVSCQEFDDKQKGWGP*SWANTV Trigger: CACTGTGTTTGCCCAAGACCAAGGACCCCAGCCCTT...CTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGACAGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | TTCGGAACTGAGTGTCTTCTGTCTGCAAGTCTTCATCTCAGGGACTTTTCCTCTAGAGCAATCCAAAGATaGCCAGCAGTACAGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: FGTECLLSASLHLRDFSSRAIQR*PAVQPG Trigger: GCCTGGCTGTACTGCTGGCCATCTTTGGATTGCTCT...AGAGGAAAAGTCCCTGAGATGAAGACTTGCAGACAGAAGACACTCAGTTCCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | GTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGCTCTCACTGGTTTGGTTTGGGCTaGAATTGGCCCTGGTGCAGC | + |
Preference number: 4 (lower is better) Translates to: VMTQQEFHARNLMTNSSHWFGLG*NWPWCS Trigger: GCTGCACCAGGGCCAATTCCAGCCCAAACCAAACCA...GTGAGAGCTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | GTTTTCCCTTTATTAGTAGGTCAGAAGGCATTGCCTGGCTCTTCCAAGAGCCCACTCCTGACAATCCCCTaGAATGAACAAGTAGCTTCC | + |
Preference number: 4 (lower is better) Translates to: VFPLLVGQKALPGSSKSPLLTIP*NEQVAS Trigger: GGAAGCTACTTGTTCATTTCAGGGGATTGTCAGGAG...TGGGCTCTTGGAAGAGCCAGGCAATGCCTTCTGACCTACTAATAAAGGGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | TTTCTAGTTCTAGTTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCTTGGGCAAACACAGTaGGAGTATATATGGGCCACT | + |
Preference number: 4 (lower is better) Translates to: FLVLVHTPSSGASIHRPKLGQTQ*EYIWAT Trigger: AGTGGCCCATATATACTCTCACTGTGTTTGCCCAAG...CTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAACTAGAACTAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | CATGCCTGTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGGGGACCCAAATCCCTTaGCTGGACATCCACCTCATA | + |
Preference number: 4 (lower is better) Translates to: HACHDPTRVSCQEFDDKQGTQIP*LDIHLI Trigger: TATGAGGTGGATGTCCAGGCAAGGGATTTGGGTCCC...CTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGACAGGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | TTCGGAACTGAGTGTCTTCTGTCTGCAAGTCTTCATCTCAGGGACTTTTCCTCTGTATATATGGGCCACTaGTCTCTGTCCAGTGTGGCA | + |
Preference number: 4 (lower is better) Translates to: FGTECLLSASLHLRDFSSVYMGH*SLSSVA Trigger: TGCCACACTGGACAGAGAGCAGTGGCCCATATATAC...AGAGGAAAAGTCCCTGAGATGAAGACTTGCAGACAGAAGACACTCAGTTCCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | GTTTTCCCTTTATTAGTAGGTCAGAAGGCATTGCCTGGCTCTTCCAAGAGCCCAACATTAATGAATAGCTaGCCCAAGGAAGGGCTGAGG | + |
Preference number: 4 (lower is better) Translates to: VFPLLVGQKALPGSSKSPTLMNS*PKEGLR Trigger: CCTCAGCCCTTCCTTGGGGCAGCTATTCATTAATGT...TGGGCTCTTGGAAGAGCCAGGCAATGCCTTCTGACCTACTAATAAAGGGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | GTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGCTCTCACCCTTTCTCTCTGTCCTaGAGATGGACACGAACAGGG | + |
Preference number: 4 (lower is better) Translates to: VMTQQEFHARNLMTNSSHPFSLS*RWTRTG Trigger: CCCTGTTCGTGTCCATCTGCAGGACAGAGAGAAAGG...GTGAGAGCTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | TTTCTAGTTCTAGTTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCCATCAGTGTCTCCTTaGTGGTATCCTTGTGAGATG | + |
Preference number: 4 (lower is better) Translates to: FLVLVHTPSSGASIHRPKPSVSP*WYPCEM Trigger: CATCTCACAAGGATACCAGCAAGGAGACACTGATGG...CTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAACTAGAACTAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | AAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTTGCTTGGTAGTATAAGAACTTTGCAATaGCCTGGGATGGAATTGGGA | + |
Preference number: 4 (lower is better) Translates to: KLSHADHYKVCPSQLLGSIRTLQ*PGMELG Trigger: TCCCAATTCCATCCCAGGCCATTGCAAAGTTCTTAT...ACTACCAAGCAACTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | TTTCTAGTTCTAGTTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGGAGGTGAAGAGAGGGTaGGTTATTTTCCCAAGTGGA | + |
Preference number: 4 (lower is better) Translates to: FLVLVHTPSSGASIHRPKEVKRG*VIFPSG Trigger: TCCACTTGGGAAAATAACCCACCCTCTCTTCACCTC...CTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAACTAGAACTAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | AAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTTGCTTGGTAGTTTCCTCTGCCTGGGATaGTTAAAGAGAAAGTTGAAG | + |
Preference number: 4 (lower is better) Translates to: KLSHADHYKVCPSQLLGSFLCLG*LKRKLK Trigger: CTTCAACTTTCTCTTTAACCATCCCAGGCAGAGGAA...ACTACCAAGCAACTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | AAGTCTTCATCTCAGGGACTTTTCCTCTTCCGTTCCTTTGTTTGCAATCCAGTGTGGATATCTGCCTTCTaGATGTGTTTCTGGGGCCTC | + |
Preference number: 4 (lower is better) Translates to: KSSSQGLFLFRSFVCNPVWISAF*MCFWGL Trigger: GAGGCCCCAGAAACACATTCAGAAGGCAGATATCCA...CACTGGATTGCAAACAAAGGAACGGAAGAGGAAAAGTCCCTGAGATGAAGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | GTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGCTCTCACAAGTCTGCTCTCAGCTaGCTTCTTTCTACCCTGTGC | + |
Preference number: 4 (lower is better) Translates to: VMTQQEFHARNLMTNSSHKSALS*LLSTLC Trigger: GCACAGGGTAGAAAGAAGGCAGCTGAGAGCAGACTT...GTGAGAGCTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS-3UTR CCA 90 bp | GTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGCTCTCACGGGCAAAGTGTTCACTaGGAGACAGGGAGTAGGAAT | + |
Preference number: 4 (lower is better) Translates to: VMTQQEFHARNLMTNSSHGQSVH*ETGSRN Trigger: ATTCCTACTCCCTGTCTCCCAGTGAACACTTTGCCC...GTGAGAGCTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | AAGTCTTCATCTCAGGGACTTTTCCTCTTCCGTTCCTTTGTTTGCAATCCAGTGTGGCGCAGAATGATCTaGCCTGTCTTGGCATCTATG | + |
Preference number: 4 (lower is better) Translates to: KSSSQGLFLFRSFVCNPVWRRMI*PVLASM Trigger: CATAGATGCCAAGACAGGCCAGATCATTCTGCGCCA...CACTGGATTGCAAACAAAGGAACGGAAGAGGAAAAGTCCCTGAGATGAAGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | GTGTTTTACTGCAAACTCCTAGGAGTGAAACAAGCTGTCCCTGTTGTCCGTAAATCCTCTGCTATCACCTaGAACTCAAAGCCTGCCATC | + |
Preference number: 4 (lower is better) Translates to: VFYCKLLGVKQAVPVVRKSSAIT*NSKPAI Trigger: GATGGCAGGCTTTGAGTTCCAGGTGATAGCAGAGGA...TTTACGGACAACAGGGACAGCTTGTTTCACTCCTAGGAGTTTGCAGTAAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | CATGCCTGTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGTCTCTGTCCTGCAGATaGACACGAACAGGGCTAAGA | + |
Preference number: 4 (lower is better) Translates to: HACHDPTRVSCQEFDDKQSLSCR*TRTGLR Trigger: TCTTAGCCCTGTTCGTGTCCATCTGCAGGACAGAGA...CTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGACAGGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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3UTR CAA 72 bp | ACAAATCCTGAGTCTGCCTCTACTCCTTGCTCAATCTaGGGGAAGAACCCTCAATGTTCCCAAGCTTCATTC | + |
Preference number: 4 (lower is better) Translates to: TNPESASTPCSI*GKNPQCSQASF Trigger: GAATGAAGCTTGGGAACATTGAGGGTTCTTCCCCAAGATTGAGCAAGGAGTAGAGGCAGACTCAGGATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS-3UTR TCA 90 bp | GTTTTCCCTTTATTAGTAGGTCAGAAGGCATTGCCTGGCTCTTCCAAGAGCCCATTGACATCACTAACCTaGATTTGGAGCTCCTTCTCA | + |
Preference number: 4 (lower is better) Translates to: VFPLLVGQKALPGSSKSPLTSLT*IWSSFS Trigger: TGAGAAGGAGCTCCAAATTCAGGTTAGTGATGTCAA...TGGGCTCTTGGAAGAGCCAGGCAATGCCTTCTGACCTACTAATAAAGGGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | CATGCCTGTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGGTGACCTCTGAGCAGTaGCTTCTCCTGTTTCAAAGT | + |
Preference number: 4 (lower is better) Translates to: HACHDPTRVSCQEFDDKQVTSEQ*LLLFQS Trigger: ACTTTGAAACAGGAGAAGTCACTGCTCAGAGGTCAC...CTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGACAGGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | AAGTCTTCATCTCAGGGACTTTTCCTCTTCCGTTCCTTTGTTTGCAATCCAGTGCTGGGGACACATGCTTaGCAAAGAAGAACTCTACCT | + |
Preference number: 4 (lower is better) Translates to: KSSSQGLFLFRSFVCNPVLGTHA*QRRTLP Trigger: AGGTAGAGTTCTTCTTTGGCAAGCATGTGTCCCCAG...CACTGGATTGCAAACAAAGGAACGGAAGAGGAAAAGTCCCTGAGATGAAGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | TTCGGAACTGAGTGTCTTCTGTCTGCAAGTCTTCATCTCAGGGACTTTTCCTCTACACTTTTCCATTACTaGCCAAGTCAGCATCATGCG | + |
Preference number: 4 (lower is better) Translates to: FGTECLLSASLHLRDFSSTLFHY*PSQHHA Trigger: CGCATGATGCTGACTTGGGCAGTAATGGAAAAGTGT...AGAGGAAAAGTCCCTGAGATGAAGACTTGCAGACAGAAGACACTCAGTTCCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | CTGTTCCTCCTGAGGGCCACCTCTTTATGTGTTTTACTGCAAACTCCTAGGAGTCATTCCCACTTTGAATaGTGTAGAAGAGTTCCCCAT | + |
Preference number: 4 (lower is better) Translates to: LFLLRATSLCVLLQTPRSHSHFE*CRRVPH Trigger: ATGGGGAACTCTTCTACAGCATTCAAAGTGGGAATG...ACTCCTAGGAGTTTGCAGTAAAACACATAAAGAGGTGGCCCTCAGGAGGAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | CTGTTCCTCCTGAGGGCCACCTCTTTATGTGTTTTACTGCAAACTCCTAGGAGTAGATCAAAATATGAGTaGAGTTCCCTGTCCAACTCC | + |
Preference number: 4 (lower is better) Translates to: LFLLRATSLCVLLQTPRSRSKYE*SSLSNS Trigger: GGAGTTGGACAGGGAACTCCACTCATATTTTGATCT...ACTCCTAGGAGTTTGCAGTAAAACACATAAAGAGGTGGCCCTCAGGAGGAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CCA 90 bp | GTGTTTTACTGCAAACTCCTAGGAGTGAAACAAGCTGTCCCTGTTGTCCGTAAAAACTTTGCAATGGCCTaGGATGGAATTGGGACCCAA | + |
Preference number: 4 (lower is better) Translates to: VFYCKLLGVKQAVPVVRKNFAMA*DGIGTQ Trigger: TTGGGTCCCAATTCCATCCCAGGCCATTGCAAAGTT...TTTACGGACAACAGGGACAGCTTGTTTCACTCCTAGGAGTTTGCAGTAAAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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3UTR CAA 72 bp | CCTGTCATGACCCAACAAGAGTTTCATGCCAGGAATTaGATGACAAACAGCTCTCACTCCAAACAGAGTGAG | + |
Preference number: 4 (lower is better) Translates to: PVMTQQEFHARN*MTNSSHSKQSE Trigger: CTCACTCTGTTTGGAGTGAGAGCTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS-3UTR TCA 90 bp | CATGCCTGTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGCACCAGATCAAAATATaGGTGGAGTTCCCTGTCCAA | + |
Preference number: 4 (lower is better) Translates to: HACHDPTRVSCQEFDDKQHQIKI*VEFPVQ Trigger: TTGGACAGGGAACTCCACTCATATTTTGATCTGGTG...CTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGACAGGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR TCA 90 bp | CATGCCTGTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGGTCCTTGATACGGTATaGCACTTTTCCATTACTGCC | + |
Preference number: 4 (lower is better) Translates to: HACHDPTRVSCQEFDDKQVLDTV*HFSITA Trigger: GGCAGTAATGGAAAAGTGTCATACCGTATCAAGGAC...CTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGACAGGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR GCA 90 bp | CATGCCTGTCATGACCCAACAAGAGTTTCATGCCAGGAATTTGATGACAAACAGCACCAGGTGGATATCTaGCTTCTGAATGTGTTTCTG | + |
Preference number: 4 (lower is better) Translates to: HACHDPTRVSCQEFDDKQHQVDI*LLNVFL Trigger: CAGAAACACATTCAGAAGGCAGATATCCACCTGGTG...CTGTTTGTCATCAAATTCCTGGCATGAAACTCTTGTTGGGTCATGACAGGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 90 bp | CCTGTGCTTCTGAAGCTGAGGCCCCACTGGTGGCTAGGTCTAGACTaGGGGTCCTCCCGCACACCGAGAGCCTCCGCAAAGCCGCGGACG | + |
Preference number: 5 (lower is better) Translates to: PVLLKLRPHWWLGLD*GSSRTPRASAKPRT Trigger: CGTCCGCGGCTTTGCGGAGGCTCTCGGTGTGCGGGAGGACCCTCAGTCTAGACCTAGCCACCAGTGGGGCCTCAGCTTCAGAAGCACAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS GCA 90 bp | CCAGCAGAGAGCTCATCTCCGAGACGAAAGTGCTGGCCAGGCGCGTaGCTGTTGGGCTCAGCTCGGGTCCCGGTCCAACTGTCTTGCCGA | + |
Preference number: 5 (lower is better) Translates to: PAESSSPRRKCWPGA*LLGSARVPVQLSCR Trigger: TCGGCAAGACAGTTGGACCGGGACCCGAGCTGAGCCCAACAGGCACGCGCCTGGCCAGCACTTTCGTCTCGGAGATGAGCTCTCTGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS-3UTR CAA 90 bp | AGGGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGCCAGGCGCGTGCCTGTaGGGCTCAGCTCGGGTCCCG | + |
Preference number: 5 (lower is better) Translates to: RDWDWADASSFYPVLVRAPGACL*GSARVP Trigger: CGGGACCCGAGCTGAGCCCAACAGGCACGCGCCTGG...CGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS GCA 90 bp | GCCCCAACAACATTTCCAGCAGAGAGCTCATCTCCGAGACGAAAGTaGTGGCCAGGCGCGTGCCTGTTGGGCTCAGCTCGGGTCCCGGTC | + |
Preference number: 5 (lower is better) Translates to: APTTFPAESSSPRRK*WPGACLLGSARVPV Trigger: GACCGGGACCCGAGCTGAGCCCAACAGGCACGCGCCTGGCCAGCACTTTCGTCTCGGAGATGAGCTCTCTGCTGGAAATGTTGTTGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS TCA 90 bp | TCCTCCTCCGGGCTCGGGGGCCCTTCTTCCAGGTCAGGTTCTGCTTaGCCACTAGGCTTGAGGCCTACAAGGCCCTCTGTGTCTGGGATG | + |
Preference number: 5 (lower is better) Translates to: SSSGLGGPSSRSGSA*PLGLRPTRPSVSGM Trigger: CATCCCAGACACAGAGGGCCTTGTAGGCCTCAAGCCTAGTGGTCAAGCAGAACCTGACCTGGAAGAAGGGCCCCCGAGCCCGGAGGAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | AGAGCTCATCTCCGAGACGAAAGTGCTGGCCAGGCGCGTGCCTGTTaGGCTCAGCTCGGGTCCCGGTCCAACTGTCTTGCCGAATGTCTG | + |
Preference number: 5 (lower is better) Translates to: RAHLRDESAGQARAC*AQLGSRSNCLAECL Trigger: CAGACATTCGGCAAGACAGTTGGACCGGGACCCGAGCTGAGCCCAACAGGCACGCGCCTGGCCAGCACTTTCGTCTCGGAGATGAGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS TCA 90 bp | CTTCCTGCCGACATAGCTTCTCCCGATCCAGCCGGCTGGAAGTGCTaGGCAGGCCGTCCTCAGAGTTCATCTGAACCGGCAGTGCCTGAG | + |
Preference number: 5 (lower is better) Translates to: LPADIASPDPAGWKC*AGRPQSSSEPAVPE Trigger: CTCAGGCACTGCCGGTTCAGATGAACTCTGAGGACGGCCTGCTCAGCACTTCCAGCCGGCTGGATCGGGAGAAGCTATGTCGGCAGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 90 bp | GAGAGCCTCCGCAAAGCCGCGGACGCAGCTTCCACTGGTACCGTGTaGTGCCCCAACAACATTTCCAGCAGAGAGCTCATCTCCGAGACG | + |
Preference number: 5 (lower is better) Translates to: ESLRKAADAASTGTV*CPNNISSRELISET Trigger: CGTCTCGGAGATGAGCTCTCTGCTGGAAATGTTGTTGGGGCAGCACACGGTACCAGTGGAAGCTGCGTCCGCGGCTTTGCGGAGGCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS CCA 90 bp | CCAACAACATTTCCAGCAGAGAGCTCATCTCCGAGACGAAAGTGCTaGCCAGGCGCGTGCCTGTTGGGCTCAGCTCGGGTCCCGGTCCAA | + |
Preference number: 5 (lower is better) Translates to: PTTFPAESSSPRRKC*PGACLLGSARVPVQ Trigger: TTGGACCGGGACCCGAGCTGAGCCCAACAGGCACGCGCCTGGCCAGCACTTTCGTCTCGGAGATGAGCTCTCTGCTGGAAATGTTGTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS GCA 90 bp | GGAAGTGCTGAGCAGGCCGTCCTCAGAGTTCATCTGAACCGGCAGTaGCTGAGGCAGCTGCAGAATCTGGAAGGCATCTCCTGCCTTCCC | + |
Preference number: 5 (lower is better) Translates to: GSAEQAVLRVHLNRQ*LRQLQNLEGISCLP Trigger: GGGAAGGCAGGAGATGCCTTCCAGATTCTGCAGCTGCCTCAGGCACTGCCGGTTCAGATGAACTCTGAGGACGGCCTGCTCAGCACTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 90 bp | GCCCCTGTGGCAAGCACGTCAAATGACACCAGACAGGGATCTTCCTaGCGACATAGCTTCTCCCGATCCAGCCGGCTGGAAGTGCTGAGC | + |
Preference number: 5 (lower is better) Translates to: APVASTSNDTRQGSS*RHSFSRSSRLEVLS Trigger: GCTCAGCACTTCCAGCCGGCTGGATCGGGAGAAGCTATGTCGGCAGGAAGATCCCTGTCTGGTGTCATTTGACGTGCTTGCCACAGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | TCTGTGGGGCCTCCTCCTTGTCTTGGTCTCCAGTCGCCCTCGCTATaGGGCTACCAGGCACCTTCAGAGGCCTTAAGAGTGGTTGGCGTA | + |
Preference number: 5 (lower is better) Translates to: SVGPPPCLGLQSPSL*GYQAPSEALRVVGV Trigger: TACGCCAACCACTCTTAAGGCCTCTGAAGGTGCCTGGTAGCCCCATAGCGAGGGCGACTGGAGACCAAGACAAGGAGGAGGCCCCACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | CCCCTGCTGCTGCCGCCGGGCTTGGCCAAGTATTTATTTCCTCGGTaGTTTGGTTTGGGCTGGAATTGGCCCTGGTGCAGCAAGGACAGC | + |
Preference number: 5 (lower is better) Translates to: PLLLPPGLAKYLFPR*FGLGWNWPWCSKDS Trigger: GCTGTCCTTGCTGCACCAGGGCCAATTCCAGCCCAAACCAAACCACCGAGGAAATAAATACTTGGCCAAGCCCGGCGGCAGCAGCAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 90 bp | AGCCTCCGCAAAGCCGCGGACGCAGCTTCCACTGGTACCGTGTGCTaGCCCAACAACATTTCCAGCAGAGAGCTCATCTCCGAGACGAAA | + |
Preference number: 5 (lower is better) Translates to: SLRKAADAASTGTVC*PNNISSRELISETK Trigger: TTTCGTCTCGGAGATGAGCTCTCTGCTGGAAATGTTGTTGGGGCAGCACACGGTACCAGTGGAAGCTGCGTCCGCGGCTTTGCGGAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS CCA 90 bp | TCCTGCAGTACCTCCTGGCTCTCTGCCAGTTCTCCCTGGTTGCCTTaGTTACGCAGGGTCCTGTATAGGGTTGGTGTGAGGTGGAAGGGG | + |
Preference number: 5 (lower is better) Translates to: SCSTSWLSASSPWLP*LRRVLYRVGVRWKG Trigger: CCCCTTCCACCTCACACCAACCCTATACAGGACCCTGCGTAACCAAGGCAACCAGGGAGAACTGGCAGAGAGCCAGGAGGTACTGCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | CTCGCTATGGGGCTACCAGGCACCTTCAGAGGCCTTAAGAGTGGTTaGCGTACAGCAGGTGGGGACTCAGGAAGGTTTAGGTTCTCCCGG | + |
Preference number: 5 (lower is better) Translates to: LAMGLPGTFRGLKSG*RTAGGDSGRFRFSR Trigger: CCGGGAGAACCTAAACCTTCCTGAGTCCCCACCTGCTGTACGCCAACCACTCTTAAGGCCTCTGAAGGTGCCTGGTAGCCCCATAGCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | GCTGCTGCCGCCGGGCTTGGCCAAGTATTTATTTCCTCGGTGGTTTaGTTTGGGCTGGAATTGGCCCTGGTGCAGCAAGGACAGCAGCTG | + |
Preference number: 5 (lower is better) Translates to: AAAAGLGQVFISSVV*FGLELALVQQGQQL Trigger: CAGCTGCTGTCCTTGCTGCACCAGGGCCAATTCCAGCCCAAACCAAACCACCGAGGAAATAAATACTTGGCCAAGCCCGGCGGCAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | TTCTGCTTGACCACTAGGCTTGAGGCCTACAAGGCCCTCTGTGTCTaGGATGGTACCCCTGCTGCTGCCGCCGGGCTTGGCCAAGTATTT | + |
Preference number: 5 (lower is better) Translates to: FCLTTRLEAYKALCV*DGTPAAAAGLGQVF Trigger: AAATACTTGGCCAAGCCCGGCGGCAGCAGCAGGGGTACCATCCCAGACACAGAGGGCCTTGTAGGCCTCAAGCCTAGTGGTCAAGCAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | GTTGGGCTCAGCTCGGGTCCCGGTCCAACTGTCTTGCCGAATGTCTaGAAGGTTCTCGGTTCCTCTGACGTTGTAGCATCGGGGGAAGAC | + |
Preference number: 5 (lower is better) Translates to: VGLSSGPGPTVLPNV*KVLGSSDVVASGED Trigger: GTCTTCCCCCGATGCTACAACGTCAGAGGAACCGAGAACCTTCCAGACATTCGGCAAGACAGTTGGACCGGGACCCGAGCTGAGCCCAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS-3UTR CAA 90 bp | TCTGCCCTAGTCAGTTGCTTGGTAGTCCTGGACTCCTGCTTCCTCTGTGAGGAAGGCCTCCTCCTTGTCTaGGTCTCCAGTCGCCCTCGC | + |
Preference number: 5 (lower is better) Translates to: SALVSCLVVLDSCFLCEEGLLLV*VSSRPR Trigger: GCGAGGGCGACTGGAGACCAAGACAAGGAGGAGGCC...TTCCTCACAGAGGAAGCAGGAGTCCAGGACTACCAAGCAACTGACTAGGGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | GTTTTCCCTTTATTAGTAGGTCAGAAGGCATTGCCTGGCTCTTCCAAGAGCCCACCAGGCGCGTGCCTGTaGGGCTCAGCTCGGGTCCCG | + |
Preference number: 5 (lower is better) Translates to: VFPLLVGQKALPGSSKSPPGACL*GSARVP Trigger: CGGGACCCGAGCTGAGCCCAACAGGCACGCGCCTGG...TGGGCTCTTGGAAGAGCCAGGCAATGCCTTCTGACCTACTAATAAAGGGAAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS CCA 90 bp | GGCCCTCTGTGTCTGGGATGGTACCCCTGCTGCTGCCGCCGGGCTTaGCCAAGTATTTATTTCCTCGGTGGTTTGGTTTGGGCTGGAATT | + |
Preference number: 5 (lower is better) Translates to: GPLCLGWYPCCCRRA*PSIYFLGGLVWAGI Trigger: AATTCCAGCCCAAACCAAACCACCGAGGAAATAAATACTTGGCCAAGCCCGGCGGCAGCAGCAGGGGTACCATCCCAGACACAGAGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | TATTCCCTGAGATCCTCAAGACCCGAGTGCCCTAACATTTCCCAGGGGACCCAGCCTCGGTGGTTTGGTTaGGGCTGGAATTGGCCCTGG | + |
Preference number: 5 (lower is better) Translates to: YSLRSSRPECPNISQGTQPRWFG*GWNWPW Trigger: CCAGGGCCAATTCCAGCCCAAACCAAACCACCGAGG...CTGGGTCCCCTGGGAAATGTTAGGGCACTCGGGTCTTGAGGATCTCAGGGAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 90 bp | AAGGAGGGGCTGCCCTGGTCCTCTACCACTATCCCCAGGTCCCACTaGCTCCCGATGAGGCTGCTGGCATTGGTGACATTAATGAATAGC | + |
Preference number: 5 (lower is better) Translates to: KEGLPWSSTTIPRSH*LPMRLLALVTLMNS Trigger: GCTATTCATTAATGTCACCAATGCCAGCAGCCTCATCGGGAGTCAGTGGGACCTGGGGATAGTGGTAGAGGACCAGGGCAGCCCCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 90 bp | ATCGGGGGAAGACAAGTTGTCTCGGTAATTGGTGGTGAGGGGCAATaGCAATCTCGCCATCCAGGCTGGGTCAGGCGGACTCAGCTTGTC | + |
Preference number: 5 (lower is better) Translates to: IGGRQVVSVIGGEGQ*QSRHPGWVRRTQLV Trigger: GACAAGCTGAGTCCGCCTGACCCAGCCTGGATGGCGAGATTGTCATTGCCCCTCACCACCAATTACCGAGACAACTTGTCTTCCCCCGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 90 bp | CCACACCGAGATGCTGGATGCGAGCTGGGGTTGCCCTCTGTCCTCTaGTATCACCTGGAACTCAAAGCCTGCCATCTGTTCATAGTCCAG | + |
Preference number: 5 (lower is better) Translates to: PHRDAGCELGLPSVL*YHLELKACHLFIVQ Trigger: CTGGACTATGAACAGATGGCAGGCTTTGAGTTCCAGGTGATAGCAGAGGACAGAGGGCAACCCCAGCTCGCATCCAGCATCTCGGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 90 bp | TGGTCCACACTGGTGACAAACACGACCTTCAATGAAACTTGGGTCTaGAAGGAGGGGCTGCCCTGGTCCTCTACCACTATCCCCAGGTCC | + |
Preference number: 5 (lower is better) Translates to: WSTLVTNTTFNETWV*KEGLPWSSTTIPRS Trigger: GGACCTGGGGATAGTGGTAGAGGACCAGGGCAGCCCCTCCTTGCAGACCCAAGTTTCATTGAAGGTCGTGTTTGTCACCAGTGTGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | AAGGCATCTCCTGCCTTCCCACGCCTCTCCTCCACTCTTAGTTCTTaGGACAGTTTCCCTATCACCGTGCCAGACGGCACTTCCTCTGTC | + |
Preference number: 5 (lower is better) Translates to: KASPAFPRLSSTLSS*DSFPITVPDGTSSV Trigger: GACAGAGGAAGTGCCGTCTGGCACGGTGATAGGGAAACTGTCCCAAGAACTAAGAGTGGAGGAGAGGCGTGGGAAGGCAGGAGATGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | CCTGCTGGATCCATGCCACTGGGATTCTCAATGGGCAACAGAAGGTaGCCCGTGGAGGCATTTACAAGCACCGAAAGGGTGGCTTTGCCT | + |
Preference number: 5 (lower is better) Translates to: PAGSMPLGFSMGNRR*PVEAFTSTERVALP Trigger: AGGCAAAGCCACCCTTTCGGTGCTTGTAAATGCCTCCACGGGCCACCTTCTGTTGCCCATTGAGAATCCCAGTGGCATGGATCCAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | TTGAAGGTGTCCTGCAGTACCTCCTGGCTCTCTGCCAGTTCTCCCTaGTTGCCTTGGTTACGCAGGGTCCTGTATAGGGTTGGTGTGAGG | + |
Preference number: 5 (lower is better) Translates to: LKVSCSTSWLSASSP*LPWLRRVLYRVGVR Trigger: CCTCACACCAACCCTATACAGGACCCTGCGTAACCAAGGCAACCAGGGAGAACTGGCAGAGAGCCAGGAGGTACTGCAGGACACCTTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | GGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGACTGGGGTCCTTGGTCTaGGGCAAACACAGTGAGAGT | + |
Preference number: 5 (lower is better) Translates to: GLGLGRCELLLPCACKSGLGSLV*GKHSES Trigger: ACTCTCACTGTGTTTGCCCAAGACCAAGGACCCCAG...TCCGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 90 bp | GAGTCCCAGCCTGCCTCCATCAGTGTCTCCTTGCTGGTATCCTTGTaGGATGGCCTGACTTCATCAGTCTCATTCTCGTGGGCCCTAAGC | + |
Preference number: 5 (lower is better) Translates to: ESQPASISVSLLVSL*DGLTSSVSFSWALS Trigger: GCTTAGGGCCCACGAGAATGAGACTGATGAAGTCAGGCCATCTCACAAGGATACCAGCAAGGAGACACTGATGGAGGCAGGCTGGGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | CTTAGGTGGTCCACACTGGTGACAAACACGACCTTCAATGAAACTTaGGTCTGCAAGGAGGGGCTGCCCTGGTCCTCTACCACTATCCCC | + |
Preference number: 5 (lower is better) Translates to: LRWSTLVTNTTFNET*VCKEGLPWSSTTIP Trigger: GGGGATAGTGGTAGAGGACCAGGGCAGCCCCTCCTTGCAGACCCAAGTTTCATTGAAGGTCGTGTTTGTCACCAGTGTGGACCACCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | CTGTCCTGCAGATGGACACGAACAGGGCTAAGAGCAATCCAAAGATaGCCAGCAGTACAGCCAGGCAGATCAAAGCCAGTGCTGGTGTGC | + |
Preference number: 5 (lower is better) Translates to: LSCRWTRTGLRAIQR*PAVQPGRSKPVLVC Trigger: GCACACCAGCACTGGCTTTGATCTGCCTGGCTGTACTGCTGGCCATCTTTGGATTGCTCTTAGCCCTGTTCGTGTCCATCTGCAGGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | CCGGGCTTGGCCAAGTATTTATTTCCTCGGTGGTTTGGTTTGGGCTaGAATTGGCCCTGGTGCAGCAAGGACAGCAGCTGGGAGATTTGC | + |
Preference number: 5 (lower is better) Translates to: PGLAKYLFPRWFGLG*NWPWCSKDSSWEIC Trigger: GCAAATCTCCCAGCTGCTGTCCTTGCTGCACCAGGGCCAATTCCAGCCCAAACCAAACCACCGAGGAAATAAATACTTGGCCAAGCCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | TATTCCCTGAGATCCTCAAGACCCGAGTGCCCTAACATTTCCCAGGGGACCCAGAGTTCCTGCTCGTCTTaGGGAAACTGTGGCTGGTGG | + |
Preference number: 5 (lower is better) Translates to: YSLRSSRPECPNISQGTQSSCSS*GNCGWW Trigger: CCACCAGCCACAGTTTCCCAAAGACGAGCAGGAACT...CTGGGTCCCCTGGGAAATGTTAGGGCACTCGGGTCTTGAGGATCTCAGGGAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | AGGGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGGTTAGGACCCGTGTCTaGGTCAAGAGCTCTGTCCAA | + |
Preference number: 5 (lower is better) Translates to: RDWDWADASSFYPVLVRAVRTRV*VKSSVQ Trigger: TTGGACAGAGCTCTTGACCAAGACACGGGTCCTAAC...CGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | TATTCCCTGAGATCCTCAAGACCCGAGTGCCCTAACATTTCCCAGGGGACCCAGGAAGTGGCCCAGCTCTaGATTCAGCCAACAGTGGAC | + |
Preference number: 5 (lower is better) Translates to: YSLRSSRPECPNISQGTQEVAQL*IQPTVD Trigger: GTCCACTGTTGGCTGAATCAAGAGCTGGGCCACTTC...CTGGGTCCCCTGGGAAATGTTAGGGCACTCGGGTCTTGAGGATCTCAGGGAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 90 bp | GAACTCCGGGCTCATGAGCAGAATCCCTTAGGTGGTCCACACTGGTaGCAAACACGACCTTCAATGAAACTTGGGTCTGCAAGGAGGGGC | + |
Preference number: 5 (lower is better) Translates to: ELRAHEQNPLGGPHW*QTRPSMKLGSARRG Trigger: GCCCCTCCTTGCAGACCCAAGTTTCATTGAAGGTCGTGTTTGTCACCAGTGTGGACCACCTAAGGGATTCTGCTCATGAGCCCGGAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 90 bp | GCATTCCTCTGCCTGGGATGGTTAAAGAGAAAGTTGAAGGTGTCCTaGAGTACCTCCTGGCTCTCTGCCAGTTCTCCCTGGTTGCCTTGG | + |
Preference number: 5 (lower is better) Translates to: AFLCLGWLKRKLKVS*STSWLSASSPWLPW Trigger: CCAAGGCAACCAGGGAGAACTGGCAGAGAGCCAGGAGGTACTGCAGGACACCTTCAACTTTCTCTTTAACCATCCCAGGCAGAGGAATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 90 bp | GGTGGGGACTCAGGAAGGTTTAGGTTCTCCCGGGAGGCATTCCTCTaGCTGGGATGGTTAAAGAGAAAGTTGAAGGTGTCCTGCAGTACC | + |
Preference number: 5 (lower is better) Translates to: GGDSGRFRFSREAFL*LGWLKRKLKVSCST Trigger: GGTACTGCAGGACACCTTCAACTTTCTCTTTAACCATCCCAGGCAGAGGAATGCCTCCCGGGAGAACCTAAACCTTCCTGAGTCCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | CTGGGATGGTTAAAGAGAAAGTTGAAGGTGTCCTGCAGTACCTCCTaGCTCTCTGCCAGTTCTCCCTGGTTGCCTTGGTTACGCAGGGTC | + |
Preference number: 5 (lower is better) Translates to: LGWLKRKLKVSCSTS*LSASSPWLPWLRRV Trigger: GACCCTGCGTAACCAAGGCAACCAGGGAGAACTGGCAGAGAGCCAGGAGGTACTGCAGGACACCTTCAACTTTCTCTTTAACCATCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | AAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTTGCTTGGTAGTCTCCCCATTGGGTCCTaGGTCGGGATCTGTAGCAGT | + |
Preference number: 5 (lower is better) Translates to: KLSHADHYKVCPSQLLGSLPIGS*VGICSS Trigger: ACTGCTACAGATCCCGACCAAGGACCCAATGGGGAG...ACTACCAAGCAACTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | CTGTTCCTCCTGAGGGCCACCTCTTTATGTGTTTTACTGCAAACTCCTAGGAGTTGTGGGGCCTCCTCCTaGTCTTGGTCTCCAGTCGCC | + |
Preference number: 5 (lower is better) Translates to: LFLLRATSLCVLLQTPRSCGASS*SWSPVA Trigger: GGCGACTGGAGACCAAGACAAGGAGGAGGCCCCACA...ACTCCTAGGAGTTTGCAGTAAAACACATAAAGAGGTGGCCCTCAGGAGGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 90 bp | AAGAGCTCTGTCCAAGGGGATTCGTGTGTGCAGAGAGGCACTCTCTaGGATTTCCAGTTCCTGCTCGTCTTTGGGAAACTGTGGCTGGTG | + |
Preference number: 5 (lower is better) Translates to: KSSVQGDSCVQRGTL*DFQFLLVFGKLWLV Trigger: CACCAGCCACAGTTTCCCAAAGACGAGCAGGAACTGGAAATCTCAGAGAGTGCCTCTCTGCACACACGAATCCCCTTGGACAGAGCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 90 bp | CCATTACTGCCCAAGTCAGCATCATGCGCTTTGAGCGTGATGAGGTaGAGAGAGGGTGGGTTATTTTCCCAAGTGGAGACCTCGTACCGG | + |
Preference number: 5 (lower is better) Translates to: PLLPKSASCALSVMR*REGGLFSQVETSYR Trigger: CCGGTACGAGGTCTCCACTTGGGAAAATAACCCACCCTCTCTTCACCTCATCACGCTCAAAGCGCATGATGCTGACTTGGGCAGTAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 90 bp | TATTTATTTCCTCGGTGGTTTGGTTTGGGCTGGAATTGGCCCTGGTaGAGCAAGGACAGCAGCTGGGAGATTTGCTGGACAGGAGGAGAG | + |
Preference number: 5 (lower is better) Translates to: YLFPRWFGLGWNWPW*SKDSSWEICWTGGE Trigger: CTCTCCTCCTGTCCAGCAAATCTCCCAGCTGCTGTCCTTGCTGCACCAGGGCCAATTCCAGCCCAAACCAAACCACCGAGGAAATAAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | TGTCTAGCACCTGAATCTCCACATGAATTAGAGCAGACGCCCCTGTaGCAAGCACGTCAAATGACACCAGACAGGGATCTTCCTGCCGAC | + |
Preference number: 5 (lower is better) Translates to: CLAPESPHELEQTPL*QARQMTPDRDLPAD Trigger: GTCGGCAGGAAGATCCCTGTCTGGTGTCATTTGACGTGCTTGCCACAGGGGCGTCTGCTCTAATTCATGTGGAGATTCAGGTGCTAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | GTGGTATACCAGTACCTGCTGGATCCATGCCACTGGGATTCTCAATaGGCAACAGAAGGTGGCCCGTGGAGGCATTTACAAGCACCGAAA | + |
Preference number: 5 (lower is better) Translates to: VVYQYLLDPCHWDSQ*ATEGGPWRHLQAPK Trigger: TTTCGGTGCTTGTAAATGCCTCCACGGGCCACCTTCTGTTGCCCATTGAGAATCCCAGTGGCATGGATCCAGCAGGTACTGGTATACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | CTGTTGTCCGTAAAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGACAAGCTCTGCATGTTaGGTCTCATCAGGGCCCACA | + |
Preference number: 5 (lower is better) Translates to: LLSVKLSHADHYKVCPSQTSSAC*VSSGPT Trigger: TGTGGGCCCTGATGAGACCAAACATGCAGAGCTTGT...CTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTTTACGGACAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | AAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTTGCTTGGTAGTCTGTCCAGTGTGGCATaGGTGAGCAGCATGTACGTG | + |
Preference number: 5 (lower is better) Translates to: KLSHADHYKVCPSQLLGSLSSVA*VSSMYV Trigger: CACGTACATGCTGCTCACCAATGCCACACTGGACAG...ACTACCAAGCAACTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | CTGTTCCTCCTGAGGGCCACCTCTTTATGTGTTTTACTGCAAACTCCTAGGAGTGGATGCGAGCTGGGGTaGCCCTCTGTCCTCTGCTAT | + |
Preference number: 5 (lower is better) Translates to: LFLLRATSLCVLLQTPRSGCELG*PSVLCY Trigger: ATAGCAGAGGACAGAGGGCAACCCCAGCTCGCATCC...ACTCCTAGGAGTTTGCAGTAAAACACATAAAGAGGTGGCCCTCAGGAGGAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 90 bp | GCCCAGCTCTTGATTCAGCCAACAGTGGACGAGACCGTTGTTTCCTaGGTCCAAGTCATTCGCACTGACAAGGGCAATGAAGCTATCCCT | + |
Preference number: 5 (lower is better) Translates to: AQLLIQPTVDETVVS*VQVIRTDKGNEAIP Trigger: AGGGATAGCTTCATTGCCCTTGTCAGTGCGAATGACTTGGACTCAGGAAACAACGGTCTCGTCCACTGTTGGCTGAATCAAGAGCTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 90 bp | CGGTCCAACTGTCTTGCCGAATGTCTGGAAGGTTCTCGGTTCCTCTaGCGTTGTAGCATCGGGGGAAGACAAGTTGTCTCGGTAATTGGT | + |
Preference number: 5 (lower is better) Translates to: RSNCLAECLEGSRFL*RCSIGGRQVVSVIG Trigger: ACCAATTACCGAGACAACTTGTCTTCCCCCGATGCTACAACGTCAGAGGAACCGAGAACCTTCCAGACATTCGGCAAGACAGTTGGACCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS GCA 90 bp | TGGCATCTATGCCAAAGGTGTTCATCACCTCTGGGGACACATGCTTaGCAAAGAAGAACTCTACCTCCCCATTGGGTCCTTGGTCGGGAT | + |
Preference number: 5 (lower is better) Translates to: WHLCQRCSSPLGTHA*QRRTLPPHWVLGRD Trigger: ATCCCGACCAAGGACCCAATGGGGAGGTAGAGTTCTTCTTTGGCAAGCATGTGTCCCCAGAGGTGATGAACACCTTTGGCATAGATGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 90 bp | GTCTTGGCATCTATGCCAAAGGTGTTCATCACCTCTGGGGACACATaGTTGCCAAAGAAGAACTCTACCTCCCCATTGGGTCCTTGGTCG | + |
Preference number: 5 (lower is better) Translates to: VLASMPKVFITSGDT*LPKKNSTSPLGPWS Trigger: CGACCAAGGACCCAATGGGGAGGTAGAGTTCTTCTTTGGCAAGCATGTGTCCCCAGAGGTGATGAACACCTTTGGCATAGATGCCAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | AAGTATTTATTTCCTCGGTGGTTTGGTTTGGGCTGGAATTGGCCCTaGTGCAGCAAGGACAGCAGCTGGGAGATTTGCTGGACAGGAGGA | + |
Preference number: 5 (lower is better) Translates to: KYLFPRWFGLGWNWP*CSKDSSWEICWTGG Trigger: TCCTCCTGTCCAGCAAATCTCCCAGCTGCTGTCCTTGCTGCACCAGGGCCAATTCCAGCCCAAACCAAACCACCGAGGAAATAAATACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | TTGGCCAAGTATTTATTTCCTCGGTGGTTTGGTTTGGGCTGGAATTaGCCCTGGTGCAGCAAGGACAGCAGCTGGGAGATTTGCTGGACA | + |
Preference number: 5 (lower is better) Translates to: LAKYLFPRWFGLGWN*PWCSKDSSWEICWT Trigger: TGTCCAGCAAATCTCCCAGCTGCTGTCCTTGCTGCACCAGGGCCAATTCCAGCCCAAACCAAACCACCGAGGAAATAAATACTTGGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | TTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCCTGCCGATAGAGGGAGACACTTTGCCATaGAAATTCCGCTGTCGTCTT | + |
Preference number: 5 (lower is better) Translates to: FTHHPLGPQFTDPSLPIEGDTLP*KFRCRL Trigger: AAGACGACAGCGGAATTTCAATGGCAAAGTGTCTCC...CTCTATCGGCAGGCTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | TTTCTAGTTCTAGTTCACACACCATCCTCTGGGGCCTCAATTCACAGACCCAAGCAGGTCAGGTTCTGCTaGACCACTAGGCTTGAGGCC | + |
Preference number: 5 (lower is better) Translates to: FLVLVHTPSSGASIHRPKQVRFC*TTRLEA Trigger: GGCCTCAAGCCTAGTGGTCAAGCAGAACCTGACCTG...CTTGGGTCTGTGAATTGAGGCCCCAGAGGATGGTGTGTGAACTAGAACTAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 90 bp | TACGTGTTGCCGTTAGTCCTTTTCAGTCTGAAGTGGCCCAGCTCTTaGTTCAGCCAACAGTGGACGAGACCGTTGTTTCCTGAGTCCAAG | + |
Preference number: 5 (lower is better) Translates to: YVLPLVLFSLKWPSS*FSQQWTRPLFPESK Trigger: CTTGGACTCAGGAAACAACGGTCTCGTCCACTGTTGGCTGAATCAAGAGCTGGGCCACTTCAGACTGAAAAGGACTAACGGCAACACGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | CAAGTCAGCATCATGCGCTTTGAGCGTGATGAGGTGAAGAGAGGGTaGGTTATTTTCCCAAGTGGAGACCTCGTACCGGCTCTTCTCAAA | + |
Preference number: 5 (lower is better) Translates to: QVSIMRFERDEVKRG*VIFPSGDLVPALLK Trigger: TTTGAGAAGAGCCGGTACGAGGTCTCCACTTGGGAAAATAACCCACCCTCTCTTCACCTCATCACGCTCAAAGCGCATGATGCTGACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | TTCGGAACTGAGTGTCTTCTGTCTGCAAGTCTTCATCTCAGGGACTTTTCCTCTTGGCCTGGGATGGAATaGGGACCCAAATCCCTTGCC | + |
Preference number: 5 (lower is better) Translates to: FGTECLLSASLHLRDFSSWPGME*GPKSLA Trigger: GGCAAGGGATTTGGGTCCCAATTCCATCCCAGGCCA...AGAGGAAAAGTCCCTGAGATGAAGACTTGCAGACAGAAGACACTCAGTTCCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | AGGGACTGGGACTGGGCAGATGCGAGCTCCTTTTACCCTGTGCTTGTAAGAGCGAGCATCATTCCCACTTaGAATGCTGTAGAAGAGTTC | + |
Preference number: 5 (lower is better) Translates to: RDWDWADASSFYPVLVRASIIPT*NAVEEF Trigger: GAACTCTTCTACAGCATTCAAAGTGGGAATGATGCT...CGCTCTTACAAGCACAGGGTAAAAGGAGCTCGCATCTGCCCAGTCCCAGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 90 bp | TTTCCAGTTCCTGCTCGTCTTTGGGAAACTGTGGCTGGTGGTCATTaGTGTCTAGCACCTGAATCTCCACATGAATTAGAGCAGACGCCC | + |
Preference number: 5 (lower is better) Translates to: FPVPARLWETVAGGH*CLAPESPHELEQTP Trigger: GGGCGTCTGCTCTAATTCATGTGGAGATTCAGGTGCTAGACATCAATGACCACCAGCCACAGTTTCCCAAAGACGAGCAGGAACTGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 90 bp | CAGCTTCTCGACAGTTGTAGGCCCTATTATCCTTTCTCTCTGTCCTaGAGATGGACACGAACAGGGCTAAGAGCAATCCAAAGATGGCCA | + |
Preference number: 5 (lower is better) Translates to: QLLDSCRPYYPFSLS*RWTRTGLRAIQRWP Trigger: TGGCCATCTTTGGATTGCTCTTAGCCCTGTTCGTGTCCATCTGCAGGACAGAGAGAAAGGATAATAGGGCCTACAACTGTCGAGAAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 90 bp | GACACATGCTTGCCAAAGAAGAACTCTACCTCCCCATTGGGTCCTTaGTCGGGATCTGTAGCAGTCAGGTTTATGAGAAGAGTACCAGGA | + |
Preference number: 5 (lower is better) Translates to: DTCLPKKNSTSPLGP*SGSVAVRFMRRVPG Trigger: TCCTGGTACTCTTCTCATAAACCTGACTGCTACAGATCCCGACCAAGGACCCAATGGGGAGGTAGAGTTCTTCTTTGGCAAGCATGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | TCTGCCCTAGTCAGTTGCTTGGTAGTCCTGGACTCCTGCTTCCTCTGTGAGGAAATGAGGCTGCTGGCATaGGTGACATTAATGAATAGC | + |
Preference number: 5 (lower is better) Translates to: SALVSCLVVLDSCFLCEEMRLLA*VTLMNS Trigger: GCTATTCATTAATGTCACCAATGCCAGCAGCCTCAT...TTCCTCACAGAGGAAGCAGGAGTCCAGGACTACCAAGCAACTGACTAGGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | CTGTTGTCCGTAAAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTGGTTAAAGAGAAAGTaGAAGGTGTCCTGCAGTACC | + |
Preference number: 5 (lower is better) Translates to: LLSVKLSHADHYKVCPSQWLKRK*KVSCST Trigger: GGTACTGCAGGACACCTTCAACTTTCTCTTTAACCA...CTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTTTACGGACAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | GTGTTTTACTGCAAACTCCTAGGAGTGAAACAAGCTGTCCCTGTTGTCCGTAAATGGTTTGGGCTGGAATaGGCCCTGGTGCAGCAAGGA | + |
Preference number: 5 (lower is better) Translates to: VFYCKLLGVKQAVPVVRKWFGLE*ALVQQG Trigger: TCCTTGCTGCACCAGGGCCAATTCCAGCCCAAACCA...TTTACGGACAACAGGGACAGCTTGTTTCACTCCTAGGAGTTTGCAGTAAAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | GTTTTCCCTTTATTAGTAGGTCAGAAGGCATTGCCTGGCTCTTCCAAGAGCCCAATGATCTGGCCTGTCTaGGCATCTATGCCAAAGGTG | + |
Preference number: 5 (lower is better) Translates to: VFPLLVGQKALPGSSKSPMIWPV*ASMPKV Trigger: CACCTTTGGCATAGATGCCAAGACAGGCCAGATCAT...TGGGCTCTTGGAAGAGCCAGGCAATGCCTTCTGACCTACTAATAAAGGGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | GTGTTTTACTGCAAACTCCTAGGAGTGAAACAAGCTGTCCCTGTTGTCCGTAAATTCTCCCTGGTTGCCTaGGTTACGCAGGGTCCTGTA | + |
Preference number: 5 (lower is better) Translates to: VFYCKLLGVKQAVPVVRKFSLVA*VTQGPV Trigger: TACAGGACCCTGCGTAACCAAGGCAACCAGGGAGAA...TTTACGGACAACAGGGACAGCTTGTTTCACTCCTAGGAGTTTGCAGTAAAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | TTCGGAACTGAGTGTCTTCTGTCTGCAAGTCTTCATCTCAGGGACTTTTCCTCTTCTGGGGCATTATCATaGGCATCCAAGAGGCTAACC | + |
Preference number: 5 (lower is better) Translates to: FGTECLLSASLHLRDFSSSGALS*ASKRLT Trigger: GGTTAGCCTCTTGGATGCCAATGATAATGCCCCAGA...AGAGGAAAAGTCCCTGAGATGAAGACTTGCAGACAGAAGACACTCAGTTCCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | CTGTTCCTCCTGAGGGCCACCTCTTTATGTGTTTTACTGCAAACTCCTAGGAGTCCTCTAGGAGACACTTaGCCATTGAAATTCCGCTGT | + |
Preference number: 5 (lower is better) Translates to: LFLLRATSLCVLLQTPRSPLGDT*PLKFRC Trigger: ACAGCGGAATTTCAATGGCAAAGTGTCTCCTAGAGG...ACTCCTAGGAGTTTGCAGTAAAACACATAAAGAGGTGGCCCTCAGGAGGAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | TTCGGAACTGAGTGTCTTCTGTCTGCAAGTCTTCATCTCAGGGACTTTTCCTCTTATTTCCTCGGTGGTTaGGTTTGGGCTGGAATTGGC | + |
Preference number: 5 (lower is better) Translates to: FGTECLLSASLHLRDFSSYFLGG*VWAGIG Trigger: GCCAATTCCAGCCCAAACCAAACCACCGAGGAAATA...AGAGGAAAAGTCCCTGAGATGAAGACTTGCAGACAGAAGACACTCAGTTCCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | AAGTCTTCATCTCAGGGACTTTTCCTCTTCCGTTCCTTTGTTTGCAATCCAGTGTTGGAGTCCAGGACATaGACCTTGACCACGCTGATT | + |
Preference number: 5 (lower is better) Translates to: KSSSQGLFLFRSFVCNPVLESRT*TLTTLI Trigger: AATCAGCGTGGTCAAGGTCAATGTCCTGGACTCCAA...CACTGGATTGCAAACAAAGGAACGGAAGAGGAAAAGTCCCTGAGATGAAGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | CTGTTGTCCGTAAAGCTCAGCCACGCAGACCATTACAAGGTCTGCCCTAGTCAGTTGACATCCAGAACTTaGATAAGAACTTTGCAATGG | + |
Preference number: 5 (lower is better) Translates to: LLSVKLSHADHYKVCPSQLTSRT*IRTLQW Trigger: CCATTGCAAAGTTCTTATCAAAGTTCTGGATGTCAA...CTGACTAGGGCAGACCTTGTAATGGTCTGCGTGGCTGAGCTTTACGGACAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 90 bp | TGCTATCACCTGGAACTCAAAGCCTGCCATCTGTTCATAGTCCAGTaGCCTCTGAGCAGTGACTTCTCCTGTTTCAAAGTCAATAATGAC | + |
Preference number: 5 (lower is better) Translates to: CYHLELKACHLFIVQ*PLSSDFSCFKVNND Trigger: GTCATTATTGACTTTGAAACAGGAGAAGTCACTGCTCAGAGGTCACTGGACTATGAACAGATGGCAGGCTTTGAGTTCCAGGTGATAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | TTCGGAACTGAGTGTCTTCTGTCTGCAAGTCTTCATCTCAGGGACTTTTCCTCTCACTTCCTCTGTCACTaGGAATTTCACCATGACAGT | + |
Preference number: 5 (lower is better) Translates to: FGTECLLSASLHLRDFSSHFLCH*EFHHDS Trigger: ACTGTCATGGTGAAATTCCAAGTGACAGAGGAAGTG...AGAGGAAAAGTCCCTGAGATGAAGACTTGCAGACAGAAGACACTCAGTTCCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS-3UTR CAA 90 bp | GTGTTTTACTGCAAACTCCTAGGAGTGAAACAAGCTGTCCCTGTTGTCCGTAAAGCAAACACTGGACTATaGTCATTGGAGTCCAGGACA | + |
Preference number: 5 (lower is better) Translates to: VFYCKLLGVKQAVPVVRKANTGL*SLESRT Trigger: TGTCCTGGACTCCAATGACAATAGTCCAGTGTTTGC...TTTACGGACAACAGGGACAGCTTGTTTCACTCCTAGGAGTTTGCAGTAAAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | GACGCTGGTGGGCTCTGTGGGGCCTCCTCCTTGTCTTaGTCTCCAGTCGCCCTCGCTATGGGGCTACCAGGC | + |
Preference number: 6 (lower is better) Translates to: DAGGLCGASSLS*SPVALAMGLPG Trigger: GCCTGGTAGCCCCATAGCGAGGGCGACTGGAGACCAAGACAAGGAGGAGGCCCCACAGAGCCCACCAGCGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | CTCCGAGACGAAAGTGCTGGCCAGGCGCGTGCCTGTTaGGCTCAGCTCGGGTCCCGGTCCAACTGTCTTGCC | + |
Preference number: 6 (lower is better) Translates to: LRDESAGQARAC*AQLGSRSNCLA Trigger: GGCAAGACAGTTGGACCGGGACCCGAGCTGAGCCCAACAGGCACGCGCCTGGCCAGCACTTTCGTCTCGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS CAA 72 bp | GGACGCTGGTGGGCTCTGTGGGGCCTCCTCCTTGTCTaGGTCTCCAGTCGCCCTCGCTATGGGGCTACCAGG | + |
Preference number: 6 (lower is better) Translates to: GRWWALWGLLLV*VSSRPRYGATR Trigger: CCTGGTAGCCCCATAGCGAGGGCGACTGGAGACCAAGACAAGGAGGAGGCCCCACAGAGCCCACCAGCGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 72 bp | AGCTCATCTCCGAGACGAAAGTGCTGGCCAGGCGCGTaGCTGTTGGGCTCAGCTCGGGTCCCGGTCCAACTG | + |
Preference number: 6 (lower is better) Translates to: SSSPRRKCWPGA*LLGSARVPVQL Trigger: CAGTTGGACCGGGACCCGAGCTGAGCCCAACAGGCACGCGCCTGGCCAGCACTTTCGTCTCGGAGATGAGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS CCA 72 bp | ACCACTAGGCTTGAGGCCTACAAGGCCCTCTGTGTCTaGGATGGTACCCCTGCTGCTGCCGCCGGGCTTGGC | + |
Preference number: 6 (lower is better) Translates to: TTRLEAYKALCV*DGTPAAAAGLG Trigger: GCCAAGCCCGGCGGCAGCAGCAGGGGTACCATCCCAGACACAGAGGGCCTTGTAGGCCTCAAGCCTAGTGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 72 bp | TCTCCGAGACGAAAGTGCTGGCCAGGCGCGTGCCTGTaGGGCTCAGCTCGGGTCCCGGTCCAACTGTCTTGC | + |
Preference number: 6 (lower is better) Translates to: SPRRKCWPGACL*GSARVPVQLSC Trigger: GCAAGACAGTTGGACCGGGACCCGAGCTGAGCCCAACAGGCACGCGCCTGGCCAGCACTTTCGTCTCGGAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS CAA 90 bp | GAGAGCTCATCTCCGAGACGAAAGTGCTGGCCAGGCGCGTGCCTGTaGGGCTCAGCTCGGGTCCCGGTCCAACTGTCTTGCCGAATGTCT | + |
Preference number: 6 (lower is better) Translates to: ESSSPRRKCWPGACL*GSARVPVQLSCRMS Trigger: AGACATTCGGCAAGACAGTTGGACCGGGACCCGAGCTGAGCCCAACAGGCACGCGCCTGGCCAGCACTTTCGTCTCGGAGATGAGCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS TCA 72 bp | GGGCTCGGGGGCCCTTCTTCCAGGTCAGGTTCTGCTTaGCCACTAGGCTTGAGGCCTACAAGGCCCTCTGTG | + |
Preference number: 6 (lower is better) Translates to: GLGGPSSRSGSA*PLGLRPTRPSV Trigger: CACAGAGGGCCTTGTAGGCCTCAAGCCTAGTGGTCAAGCAGAACCTGACCTGGAAGAAGGGCCCCCGAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | TTTCCAGCAGAGAGCTCATCTCCGAGACGAAAGTGCTaGCCAGGCGCGTGCCTGTTGGGCTCAGCTCGGGTC | + |
Preference number: 6 (lower is better) Translates to: FPAESSSPRRKC*PGACLLGSARV Trigger: GACCCGAGCTGAGCCCAACAGGCACGCGCCTGGCCAGCACTTTCGTCTCGGAGATGAGCTCTCTGCTGGAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS CCA 72 bp | CGAGAGCCTCCGCAAAGCCGCGGACGCAGCTTCCACTaGTACCGTGTGCTGCCCCAACAACATTTCCAGCAG | + |
Preference number: 6 (lower is better) Translates to: REPPQSRGRSFH*YRVLPQQHFQQ Trigger: CTGCTGGAAATGTTGTTGGGGCAGCACACGGTACCAGTGGAAGCTGCGTCCGCGGCTTTGCGGAGGCTCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS GCA 72 bp | ACATTTCCAGCAGAGAGCTCATCTCCGAGACGAAAGTaGTGGCCAGGCGCGTGCCTGTTGGGCTCAGCTCGG | + |
Preference number: 6 (lower is better) Translates to: TFPAESSSPRRK*WPGACLLGSAR Trigger: CCGAGCTGAGCCCAACAGGCACGCGCCTGGCCAGCACTTTCGTCTCGGAGATGAGCTCTCTGCTGGAAATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS CCA 72 bp | GGCTGGAATTGGCCCTGGTGCAGCAAGGACAGCAGCTaGGAGATTTGCTGGACAGGAGGAGAGTCCCCAGCA | + |
Preference number: 6 (lower is better) Translates to: GWNWPWCSKDSS*EICWTGGESPA Trigger: TGCTGGGGACTCTCCTCCTGTCCAGCAAATCTCCCAGCTGCTGTCCTTGCTGCACCAGGGCCAATTCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 90 bp | AGGCGCGTGCCTGTTGGGCTCAGCTCGGGTCCCGGTCCAACTGTCTaGCCGAATGTCTGGAAGGTTCTCGGTTCCTCTGACGTTGTAGCA | + |
Preference number: 6 (lower is better) Translates to: RRVPVGLSSGPGPTV*PNVWKVLGSSDVVA Trigger: TGCTACAACGTCAGAGGAACCGAGAACCTTCCAGACATTCGGCAAGACAGTTGGACCGGGACCCGAGCTGAGCCCAACAGGCACGCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS TCA 72 bp | GACATAGCTTCTCCCGATCCAGCCGGCTGGAAGTGCTaGGCAGGCCGTCCTCAGAGTTCATCTGAACCGGCA | + |
Preference number: 6 (lower is better) Translates to: DIASPDPAGWKC*AGRPQSSSEPA Trigger: TGCCGGTTCAGATGAACTCTGAGGACGGCCTGCTCAGCACTTCCAGCCGGCTGGATCGGGAGAAGCTATGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 72 bp | GAGCAGGCCGTCCTCAGAGTTCATCTGAACCGGCAGTaGCTGAGGCAGCTGCAGAATCTGGAAGGCATCTCC | + |
Preference number: 6 (lower is better) Translates to: EQAVLRVHLNRQ*LRQLQNLEGIS Trigger: GGAGATGCCTTCCAGATTCTGCAGCTGCCTCAGGCACTGCCGGTTCAGATGAACTCTGAGGACGGCCTGCTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 72 bp | GGCATCCAAGAGGCTAACCCACACCGAGATGCTGGATaGGAGCTGGGGTTGCCCTCTGTCCTCTGCTATCAC | + |
Preference number: 6 (lower is better) Translates to: GIQEANPHRDAG*ELGLPSVLCYH Trigger: GTGATAGCAGAGGACAGAGGGCAACCCCAGCTCGCATCCAGCATCTCGGTGTGGGTTAGCCTCTTGGATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 72 bp | GGCCTACAAGGCCCTCTGTGTCTGGGATGGTACCCCTaGTGCTGCCGCCGGGCTTGGCCAAGTATTTATTTC | + |
Preference number: 6 (lower is better) Translates to: GLQGPLCLGWYP*CCRRAWPSIYF Trigger: GAAATAAATACTTGGCCAAGCCCGGCGGCAGCAGCAGGGGTACCATCCCAGACACAGAGGGCCTTGTAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 72 bp | CTGTTGGGCTCAGCTCGGGTCCCGGTCCAACTGTCTTaGCGAATGTCTGGAAGGTTCTCGGTTCCTCTGACG | + |
Preference number: 6 (lower is better) Translates to: LLGSARVPVQLS*RMSGRFSVPLT Trigger: CGTCAGAGGAACCGAGAACCTTCCAGACATTCGGCAAGACAGTTGGACCGGGACCCGAGCTGAGCCCAACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS GCA 72 bp | CGCAAAGCCGCGGACGCAGCTTCCACTGGTACCGTGTaGTGCCCCAACAACATTTCCAGCAGAGAGCTCATC | + |
Preference number: 6 (lower is better) Translates to: RKAADAASTGTV*CPNNISSRELI Trigger: GATGAGCTCTCTGCTGGAAATGTTGTTGGGGCAGCACACGGTACCAGTGGAAGCTGCGTCCGCGGCTTTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS CCA 72 bp | CCTCCTCCTTGTCTTGGTCTCCAGTCGCCCTCGCTATaGGGCTACCAGGCACCTTCAGAGGCCTTAAGAGTG | + |
Preference number: 6 (lower is better) Translates to: PPPCLGLQSPSL*GYQAPSEALRV Trigger: CACTCTTAAGGCCTCTGAAGGTGCCTGGTAGCCCCATAGCGAGGGCGACTGGAGACCAAGACAAGGAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 72 bp | CCTGTTGGGCTCAGCTCGGGTCCCGGTCCAACTGTCTaGCCGAATGTCTGGAAGGTTCTCGGTTCCTCTGAC | + |
Preference number: 6 (lower is better) Translates to: PVGLSSGPGPTV*PNVWKVLGSSD Trigger: GTCAGAGGAACCGAGAACCTTCCAGACATTCGGCAAGACAGTTGGACCGGGACCCGAGCTGAGCCCAACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS CAA 90 bp | GGCAATGACAATCTCGCCATCCAGGCTGGGTCAGGCGGACTCAGCTaGTCCAGGGCTAGACCTGTATTAGGGTCCAACAGGCTCGACAGC | + |
Preference number: 6 (lower is better) Translates to: GNDNLAIQAGSGGLS*SRARPVLGSNRLDS Trigger: GCTGTCGAGCCTGTTGGACCCTAATACAGGTCTAGCCCTGGACAAGCTGAGTCCGCCTGACCCAGCCTGGATGGCGAGATTGTCATTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 90 bp | AAGGTGTCCTGCAGTACCTCCTGGCTCTCTGCCAGTTCTCCCTGGTaGCCTTGGTTACGCAGGGTCCTGTATAGGGTTGGTGTGAGGTGG | + |
Preference number: 6 (lower is better) Translates to: KVSCSTSWLSASSPW*PWLRRVLYRVGVRW Trigger: CCACCTCACACCAACCCTATACAGGACCCTGCGTAACCAAGGCAACCAGGGAGAACTGGCAGAGAGCCAGGAGGTACTGCAGGACACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 90 bp | TGCTGCTGCCGCCGGGCTTGGCCAAGTATTTATTTCCTCGGTGGTTaGGTTTGGGCTGGAATTGGCCCTGGTGCAGCAAGGACAGCAGCT | + |
Preference number: 6 (lower is better) Translates to: CCCRRAWPSIYFLGG*VWAGIGPGAARTAA Trigger: AGCTGCTGTCCTTGCTGCACCAGGGCCAATTCCAGCCCAAACCAAACCACCGAGGAAATAAATACTTGGCCAAGCCCGGCGGCAGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 90 bp | AGGCCCTCTGTGTCTGGGATGGTACCCCTGCTGCTGCCGCCGGGCTaGGCCAAGTATTTATTTCCTCGGTGGTTTGGTTTGGGCTGGAAT | + |
Preference number: 6 (lower is better) Translates to: RPSVSGMVPLLLPPG*AKYLFPRWFGLGWN Trigger: ATTCCAGCCCAAACCAAACCACCGAGGAAATAAATACTTGGCCAAGCCCGGCGGCAGCAGCAGGGGTACCATCCCAGACACAGAGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 72 bp | CTGCCCTGGTCCTCTACCACTATCCCCAGGTCCCACTaGCTCCCGATGAGGCTGCTGGCATTGGTGACATTA | + |
Preference number: 6 (lower is better) Translates to: LPWSSTTIPRSH*LPMRLLALVTL Trigger: TAATGTCACCAATGCCAGCAGCCTCATCGGGAGTCAGTGGGACCTGGGGATAGTGGTAGAGGACCAGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 72 bp | CGACCTTCAATGAAACTTGGGTCTGCAAGGAGGGGCTaGCCTGGTCCTCTACCACTATCCCCAGGTCCCACT | + |
Preference number: 6 (lower is better) Translates to: RPSMKLGSARRG*PGPLPLSPGPT Trigger: AGTGGGACCTGGGGATAGTGGTAGAGGACCAGGGCAGCCCCTCCTTGCAGACCCAAGTTTCATTGAAGGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 72 bp | GCAGTACCTCCTGGCTCTCTGCCAGTTCTCCCTGGTTaGCTTGGTTACGCAGGGTCCTGTATAGGGTTGGTG | + |
Preference number: 6 (lower is better) Translates to: AVPPGSLPVLPG*LGYAGSCIGLV Trigger: CACCAACCCTATACAGGACCCTGCGTAACCAAGGCAACCAGGGAGAACTGGCAGAGAGCCAGGAGGTACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 72 bp | AAAGCCGCGGACGCAGCTTCCACTGGTACCGTGTGCTaGCCCAACAACATTTCCAGCAGAGAGCTCATCTCC | + |
Preference number: 6 (lower is better) Translates to: KAADAASTGTVC*PNNISSRELIS Trigger: GGAGATGAGCTCTCTGCTGGAAATGTTGTTGGGGCAGCACACGGTACCAGTGGAAGCTGCGTCCGCGGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS CCA 72 bp | CCTGCCTTCCCACGCCTCTCCTCCACTCTTAGTTCTTaGGACAGTTTCCCTATCACCGTGCCAGACGGCACT | + |
Preference number: 6 (lower is better) Translates to: PAFPRLSSTLSS*DSFPITVPDGT Trigger: AGTGCCGTCTGGCACGGTGATAGGGAAACTGTCCCAAGAACTAAGAGTGGAGGAGAGGCGTGGGAAGGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | CTATCCCTGGGAAGATCTTCTGACACCAGCGACGTCTaGGAGGCCCACGTGATGAGGATGCTTGGGGCATTG | + |
Preference number: 6 (lower is better) Translates to: LSLGRSSDTSDV*EAHVMRMLGAL Trigger: CAATGCCCCAAGCATCCTCATCACGTGGGCCTCCCAGACGTCGCTGGTGTCAGAAGATCTTCCCAGGGATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | ACCTCCTGGCTCTCTGCCAGTTCTCCCTGGTTGCCTTaGTTACGCAGGGTCCTGTATAGGGTTGGTGTGAGG | + |
Preference number: 6 (lower is better) Translates to: TSWLSASSPWLP*LRRVLYRVGVR Trigger: CCTCACACCAACCCTATACAGGACCCTGCGTAACCAAGGCAACCAGGGAGAACTGGCAGAGAGCCAGGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | GGGCTACCAGGCACCTTCAGAGGCCTTAAGAGTGGTTaGCGTACAGCAGGTGGGGACTCAGGAAGGTTTAGG | + |
Preference number: 6 (lower is better) Translates to: GLPGTFRGLKSG*RTAGGDSGRFR Trigger: CCTAAACCTTCCTGAGTCCCCACCTGCTGTACGCCAACCACTCTTAAGGCCTCTGAAGGTGCCTGGTAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | CTGCCGCCGGGCTTGGCCAAGTATTTATTTCCTCGGTaGTTTGGTTTGGGCTGGAATTGGCCCTGGTGCAGC | + |
Preference number: 6 (lower is better) Translates to: LPPGLAKYLFPR*FGLGWNWPWCS Trigger: GCTGCACCAGGGCCAATTCCAGCCCAAACCAAACCACCGAGGAAATAAATACTTGGCCAAGCCCGGCGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 72 bp | AATCTCGCCATCCAGGCTGGGTCAGGCGGACTCAGCTaGTCCAGGGCTAGACCTGTATTAGGGTCCAACAGG | + |
Preference number: 6 (lower is better) Translates to: NLAIQAGSGGLS*SRARPVLGSNR Trigger: CCTGTTGGACCCTAATACAGGTCTAGCCCTGGACAAGCTGAGTCCGCCTGACCCAGCCTGGATGGCGAGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 90 bp | ATCCAAGAGGCTAACCCACACCGAGATGCTGGATGCGAGCTGGGGTaGCCCTCTGTCCTCTGCTATCACCTGGAACTCAAAGCCTGCCAT | + |
Preference number: 6 (lower is better) Translates to: IQEANPHRDAGCELG*PSVLCYHLELKACH Trigger: ATGGCAGGCTTTGAGTTCCAGGTGATAGCAGAGGACAGAGGGCAACCCCAGCTCGCATCCAGCATCTCGGTGTGGGTTAGCCTCTTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 72 bp | GCAAGCACGTCAAATGACACCAGACAGGGATCTTCCTaGCGACATAGCTTCTCCCGATCCAGCCGGCTGGAA | + |
Preference number: 6 (lower is better) Translates to: ASTSNDTRQGSS*RHSFSRSSRLE Trigger: TTCCAGCCGGCTGGATCGGGAGAAGCTATGTCGGCAGGAAGATCCCTGTCTGGTGTCATTTGACGTGCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 72 bp | GATGCTGGATGCGAGCTGGGGTTGCCCTCTGTCCTCTaGTATCACCTGGAACTCAAAGCCTGCCATCTGTTC | + |
Preference number: 6 (lower is better) Translates to: DAGCELGLPSVL*YHLELKACHLF Trigger: GAACAGATGGCAGGCTTTGAGTTCCAGGTGATAGCAGAGGACAGAGGGCAACCCCAGCTCGCATCCAGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | TCCTGCAGTACCTCCTGGCTCTCTGCCAGTTCTCCCTaGTTGCCTTGGTTACGCAGGGTCCTGTATAGGGTT | + |
Preference number: 6 (lower is better) Translates to: SCSTSWLSASSP*LPWLRRVLYRV Trigger: AACCCTATACAGGACCCTGCGTAACCAAGGCAACCAGGGAGAACTGGCAGAGAGCCAGGAGGTACTGCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | TTTCCTCGGTGGTTTGGTTTGGGCTGGAATTGGCCCTaGTGCAGCAAGGACAGCAGCTGGGAGATTTGCTGG | + |
Preference number: 6 (lower is better) Translates to: FPRWFGLGWNWP*CSKDSSWEICW Trigger: CCAGCAAATCTCCCAGCTGCTGTCCTTGCTGCACCAGGGCCAATTCCAGCCCAAACCAAACCACCGAGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | TGTCTGGGATGGTACCCCTGCTGCTGCCGCCGGGCTTaGCCAAGTATTTATTTCCTCGGTGGTTTGGTTTGG | + |
Preference number: 6 (lower is better) Translates to: CLGWYPCCCRRA*PSIYFLGGLVW Trigger: CCAAACCAAACCACCGAGGAAATAAATACTTGGCCAAGCCCGGCGGCAGCAGCAGGGGTACCATCCCAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 72 bp | TGCAGTACCTCCTGGCTCTCTGCCAGTTCTCCCTGGTaGCCTTGGTTACGCAGGGTCCTGTATAGGGTTGGT | + |
Preference number: 6 (lower is better) Translates to: CSTSWLSASSPW*PWLRRVLYRVG Trigger: ACCAACCCTATACAGGACCCTGCGTAACCAAGGCAACCAGGGAGAACTGGCAGAGAGCCAGGAGGTACTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 72 bp | CGCCGGGCTTGGCCAAGTATTTATTTCCTCGGTGGTTaGGTTTGGGCTGGAATTGGCCCTGGTGCAGCAAGG | + |
Preference number: 6 (lower is better) Translates to: RRAWPSIYFLGG*VWAGIGPGAAR Trigger: CCTTGCTGCACCAGGGCCAATTCCAGCCCAAACCAAACCACCGAGGAAATAAATACTTGGCCAAGCCCGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 72 bp | GTGTCTGGGATGGTACCCCTGCTGCTGCCGCCGGGCTaGGCCAAGTATTTATTTCCTCGGTGGTTTGGTTTG | + |
Preference number: 6 (lower is better) Translates to: VSGMVPLLLPPG*AKYLFPRWFGL Trigger: CAAACCAAACCACCGAGGAAATAAATACTTGGCCAAGCCCGGCGGCAGCAGCAGGGGTACCATCCCAGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 90 bp | TTCTCCCGGGAGGCATTCCTCTGCCTGGGATGGTTAAAGAGAAAGTaGAAGGTGTCCTGCAGTACCTCCTGGCTCTCTGCCAGTTCTCCC | + |
Preference number: 6 (lower is better) Translates to: FSREAFLCLGWLKRK*KVSCSTSWLSASSP Trigger: GGGAGAACTGGCAGAGAGCCAGGAGGTACTGCAGGACACCTTCAACTTTCTCTTTAACCATCCCAGGCAGAGGAATGCCTCCCGGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 72 bp | AAAGCCAGTGCTGGTGTGCTCAGAACTCCGGGCTCATaGGCAGAATCCCTTAGGTGGTCCACACTGGTGACA | + |
Preference number: 6 (lower is better) Translates to: KASAGVLRTPGS*AESLRWSTLVT Trigger: TGTCACCAGTGTGGACCACCTAAGGGATTCTGCTCATGAGCCCGGAGTTCTGAGCACACCAGCACTGGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 72 bp | AGACAAGTTGTCTCGGTAATTGGTGGTGAGGGGCAATaGCAATCTCGCCATCCAGGCTGGGTCAGGCGGACT | + |
Preference number: 6 (lower is better) Translates to: RQVVSVIGGEGQ*QSRHPGWVRRT Trigger: AGTCCGCCTGACCCAGCCTGGATGGCGAGATTGTCATTGCCCCTCACCACCAATTACCGAGACAACTTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 72 bp | CATCGGGGGAAGACAAGTTGTCTCGGTAATTGGTGGTaGGGGGCAATGACAATCTCGCCATCCAGGCTGGGT | + |
Preference number: 6 (lower is better) Translates to: HRGKTSCLGNWW*GAMTISPSRLG Trigger: ACCCAGCCTGGATGGCGAGATTGTCATTGCCCCTCACCACCAATTACCGAGACAACTTGTCTTCCCCCGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | TCCATGCCACTGGGATTCTCAATGGGCAACAGAAGGTaGCCCGTGGAGGCATTTACAAGCACCGAAAGGGTG | + |
Preference number: 6 (lower is better) Translates to: SMPLGFSMGNRR*PVEAFTSTERV Trigger: CACCCTTTCGGTGCTTGTAAATGCCTCCACGGGCCACCTTCTGTTGCCCATTGAGAATCCCAGTGGCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | TTGGTGGTATACCAGTACCTGCTGGATCCATGCCACTaGGATTCTCAATGGGCAACAGAAGGTGGCCCGTGG | + |
Preference number: 6 (lower is better) Translates to: LVVYQYLLDPCH*DSQWATEGGPW Trigger: CCACGGGCCACCTTCTGTTGCCCATTGAGAATCCCAGTGGCATGGATCCAGCAGGTACTGGTATACCACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | TCCACACTGGTGACAAACACGACCTTCAATGAAACTTaGGTCTGCAAGGAGGGGCTGCCCTGGTCCTCTACC | + |
Preference number: 6 (lower is better) Translates to: STLVTNTTFNET*VCKEGLPWSST Trigger: GGTAGAGGACCAGGGCAGCCCCTCCTTGCAGACCCAAGTTTCATTGAAGGTCGTGTTTGTCACCAGTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | GCCGGGCTTGGCCAAGTATTTATTTCCTCGGTGGTTTaGTTTGGGCTGGAATTGGCCCTGGTGCAGCAAGGA | + |
Preference number: 6 (lower is better) Translates to: AGLGQVFISSVV*FGLELALVQQG Trigger: TCCTTGCTGCACCAGGGCCAATTCCAGCCCAAACCAAACCACCGAGGAAATAAATACTTGGCCAAGCCCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 72 bp | CCCTATCACCGTGCCAGACGGCACTTCCTCTGTCACTaGGAATTTCACCATGACAGTGGCCACCTCCTGACA | + |
Preference number: 6 (lower is better) Translates to: PYHRARRHFLCH*EFHHDSGHLLT Trigger: TGTCAGGAGGTGGCCACTGTCATGGTGAAATTCCAAGTGACAGAGGAAGTGCCGTCTGGCACGGTGATAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 72 bp | AATGTGTTTCTGGGGCCTCTTGGGCTGGTGGCGGTATaGCGACTCAGCTTCTCGACAGTTGTAGGCCCTATT | + |
Preference number: 6 (lower is better) Translates to: NVFLGPLGLVAV*RLSFSTVVGPI Trigger: AATAGGGCCTACAACTGTCGAGAAGCTGAGTCGTCATACCGCCACCAGCCCAAGAGGCCCCAGAAACACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 72 bp | TGCCTGGGATGGTTAAAGAGAAAGTTGAAGGTGTCCTaGAGTACCTCCTGGCTCTCTGCCAGTTCTCCCTGG | + |
Preference number: 6 (lower is better) Translates to: CLGWLKRKLKVS*STSWLSASSPW Trigger: CCAGGGAGAACTGGCAGAGAGCCAGGAGGTACTGCAGGACACCTTCAACTTTCTCTTTAACCATCCCAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | CAGTACCTGCTGGATCCATGCCACTGGGATTCTCAATaGGCAACAGAAGGTGGCCCGTGGAGGCATTTACAA | + |
Preference number: 6 (lower is better) Translates to: QYLLDPCHWDSQ*ATEGGPWRHLQ Trigger: TTGTAAATGCCTCCACGGGCCACCTTCTGTTGCCCATTGAGAATCCCAGTGGCATGGATCCAGCAGGTACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | GCCAAGTATTTATTTCCTCGGTGGTTTGGTTTGGGCTaGAATTGGCCCTGGTGCAGCAAGGACAGCAGCTGG | + |
Preference number: 6 (lower is better) Translates to: AKYLFPRWFGLG*NWPWCSKDSSW Trigger: CCAGCTGCTGTCCTTGCTGCACCAGGGCCAATTCCAGCCCAAACCAAACCACCGAGGAAATAAATACTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 72 bp | CTGTCCAGTGTGGCATTGGTGAGCAGCATGTACGTGTaGCCGTTAGTCCTTTTCAGTCTGAAGTGGCCCAGC | + |
Preference number: 6 (lower is better) Translates to: LSSVALVSSMYV*PLVLFSLKWPS Trigger: GCTGGGCCACTTCAGACTGAAAAGGACTAACGGCAACACGTACATGCTGCTCACCAATGCCACACTGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 72 bp | GAGGCATTCCTCTGCCTGGGATGGTTAAAGAGAAAGTaGAAGGTGTCCTGCAGTACCTCCTGGCTCTCTGCC | + |
Preference number: 6 (lower is better) Translates to: EAFLCLGWLKRK*KVSCSTSWLSA Trigger: GGCAGAGAGCCAGGAGGTACTGCAGGACACCTTCAACTTTCTCTTTAACCATCCCAGGCAGAGGAATGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 90 bp | CTTGGCCAAGTATTTATTTCCTCGGTGGTTTGGTTTGGGCTGGAATaGGCCCTGGTGCAGCAAGGACAGCAGCTGGGAGATTTGCTGGAC | + |
Preference number: 6 (lower is better) Translates to: LGQVFISSVVWFGLE*ALVQQGQQLGDLLD Trigger: GTCCAGCAAATCTCCCAGCTGCTGTCCTTGCTGCACCAGGGCCAATTCCAGCCCAAACCAAACCACCGAGGAAATAAATACTTGGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 72 bp | GTCCAAGGGGATTCGTGTGTGCAGAGAGGCACTCTCTaGGATTTCCAGTTCCTGCTCGTCTTTGGGAAACTG | + |
Preference number: 6 (lower is better) Translates to: VQGDSCVQRGTL*DFQFLLVFGKL Trigger: CAGTTTCCCAAAGACGAGCAGGAACTGGAAATCTCAGAGAGTGCCTCTCTGCACACACGAATCCCCTTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 72 bp | CCCAAGTCAGCATCATGCGCTTTGAGCGTGATGAGGTaGAGAGAGGGTGGGTTATTTTCCCAAGTGGAGACC | + |
Preference number: 6 (lower is better) Translates to: PKSASCALSVMR*REGGLFSQVET Trigger: GGTCTCCACTTGGGAAAATAACCCACCCTCTCTTCACCTCATCACGCTCAAAGCGCATGATGCTGACTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 72 bp | CCTGCCTCCATCAGTGTCTCCTTGCTGGTATCCTTGTaGGATGGCCTGACTTCATCAGTCTCATTCTCGTGG | + |
Preference number: 6 (lower is better) Translates to: PASISVSLLVSL*DGLTSSVSFSW Trigger: CCACGAGAATGAGACTGATGAAGTCAGGCCATCTCACAAGGATACCAGCAAGGAGACACTGATGGAGGCAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 72 bp | TGTCTTGCCGAATGTCTGGAAGGTTCTCGGTTCCTCTaGCGTTGTAGCATCGGGGGAAGACAAGTTGTCTCG | + |
Preference number: 6 (lower is better) Translates to: CLAECLEGSRFL*RCSIGGRQVVS Trigger: CGAGACAACTTGTCTTCCCCCGATGCTACAACGTCAGAGGAACCGAGAACCTTCCAGACATTCGGCAAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025311.8 ENSMUST00000194012.2 |
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CDS CCA 72 bp | ATCATGCGCTTTGAGCGTGATGAGGTGAAGAGAGGGTaGGTTATTTTCCCAAGTGGAGACCTCGTACCGGCT | + |
Preference number: 6 (lower is better) Translates to: IMRFERDEVKRG*VIFPSGDLVPA Trigger: AGCCGGTACGAGGTCTCCACTTGGGAAAATAACCCACCCTCTCTTCACCTCATCACGCTCAAAGCGCATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | CTCCATCAGTGTCTCCTTGCTGGTATCCTTGTGAGATaGCCTGACTTCATCAGTCTCATTCTCGTGGGCCCT | + |
Preference number: 6 (lower is better) Translates to: LHQCLLAGILVR*PDFISLILVGP Trigger: AGGGCCCACGAGAATGAGACTGATGAAGTCAGGCCATCTCACAAGGATACCAGCAAGGAGACACTGATGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 72 bp | CTGTCCAACTCCTTCACCACCACAAGCTCTGCATGTTaGGTCTCATCAGGGCCCACAATAACATCCAGGGCA | + |
Preference number: 6 (lower is better) Translates to: LSNSFTTTSSAC*VSSGPTITSRA Trigger: TGCCCTGGATGTTATTGTGGGCCCTGATGAGACCAAACATGCAGAGCTTGTGGTGGTGAAGGAGTTGGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 90 bp | TTGGCATCTATGCCAAAGGTGTTCATCACCTCTGGGGACACATGCTaGCCAAAGAAGAACTCTACCTCCCCATTGGGTCCTTGGTCGGGA | + |
Preference number: 6 (lower is better) Translates to: LASMPKVFITSGDTC*PKKNSTSPLGPWSG Trigger: TCCCGACCAAGGACCCAATGGGGAGGTAGAGTTCTTCTTTGGCAAGCATGTGTCCCCAGAGGTGATGAACACCTTTGGCATAGATGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 90 bp | GGACACATGCTTGCCAAAGAAGAACTCTACCTCCCCATTGGGTCCTaGGTCGGGATCTGTAGCAGTCAGGTTTATGAGAAGAGTACCAGG | + |
Preference number: 6 (lower is better) Translates to: GHMLAKEELYLPIGS*VGICSSQVYEKSTR Trigger: CCTGGTACTCTTCTCATAAACCTGACTGCTACAGATCCCGACCAAGGACCCAATGGGGAGGTAGAGTTCTTCTTTGGCAAGCATGTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 90 bp | ACCTCTGGGGACACATGCTTGCCAAAGAAGAACTCTACCTCCCCATaGGGTCCTTGGTCGGGATCTGTAGCAGTCAGGTTTATGAGAAGA | + |
Preference number: 6 (lower is better) Translates to: TSGDTCLPKKNSTSP*GPWSGSVAVRFMRR Trigger: TCTTCTCATAAACCTGACTGCTACAGATCCCGACCAAGGACCCAATGGGGAGGTAGAGTTCTTCTTTGGCAAGCATGTGTCCCCAGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 72 bp | CCCATTGTCATAGGCGGTCAGCACCAGATCAAAATATaGGTGGAGTTCCCTGTCCAACTCCTTCACCACCAC | + |
Preference number: 6 (lower is better) Translates to: PIVIGGQHQIKI*VEFPVQLLHHH Trigger: GTGGTGGTGAAGGAGTTGGACAGGGAACTCCACTCATATTTTGATCTGGTGCTGACCGCCTATGACAATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 72 bp | CCGTTAGTCCTTTTCAGTCTGAAGTGGCCCAGCTCTTaGTTCAGCCAACAGTGGACGAGACCGTTGTTTCCT | + |
Preference number: 6 (lower is better) Translates to: PLVLFSLKWPSS*FSQQWTRPLFP Trigger: AGGAAACAACGGTCTCGTCCACTGTTGGCTGAATCAAGAGCTGGGCCACTTCAGACTGAAAAGGACTAACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 72 bp | TCTTGGGCAAACACAGTGAGAGTATATATGGGCCACTaGTCTCTGTCCAGTGTGGCATTGGTGAGCAGCATG | + |
Preference number: 6 (lower is better) Translates to: SWANTVRVYMGH*SLSSVALVSSM Trigger: CATGCTGCTCACCAATGCCACACTGGACAGAGAGCAGTGGCCCATATATACTCTCACTGTGTTTGCCCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 72 bp | TCAGGAAGGTTTAGGTTCTCCCGGGAGGCATTCCTCTaGCTGGGATGGTTAAAGAGAAAGTTGAAGGTGTCC | + |
Preference number: 6 (lower is better) Translates to: SGRFRFSREAFL*LGWLKRKLKVS Trigger: GGACACCTTCAACTTTCTCTTTAACCATCCCAGGCAGAGGAATGCCTCCCGGGAGAACCTAAACCTTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | CCTGAATCTCCACATGAATTAGAGCAGACGCCCCTGTaGCAAGCACGTCAAATGACACCAGACAGGGATCTT | + |
Preference number: 6 (lower is better) Translates to: PESPHELEQTPL*QARQMTPDRDL Trigger: AAGATCCCTGTCTGGTGTCATTTGACGTGCTTGCCACAGGGGCGTCTGCTCTAATTCATGTGGAGATTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | GCCACGATTGTTAACAAAAGGAAAGACCAGGGGCTGTaGGTAGCCTTTGGTGGTATACCAGTACCTGCTGGA | + |
Preference number: 6 (lower is better) Translates to: ATIVNKRKDQGL*VAFGGIPVPAG Trigger: TCCAGCAGGTACTGGTATACCACCAAAGGCTACCCACAGCCCCTGGTCTTTCCTTTTGTTAACAATCGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | TATTTATTTCCTCGGTGGTTTGGTTTGGGCTGGAATTaGCCCTGGTGCAGCAAGGACAGCAGCTGGGAGATT | + |
Preference number: 6 (lower is better) Translates to: YLFPRWFGLGWN*PWCSKDSSWEI Trigger: AATCTCCCAGCTGCTGTCCTTGCTGCACCAGGGCCAATTCCAGCCCAAACCAAACCACCGAGGAAATAAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 72 bp | GACACATGCTTGCCAAAGAAGAACTCTACCTCCCCATaGGGTCCTTGGTCGGGATCTGTAGCAGTCAGGTTT | + |
Preference number: 6 (lower is better) Translates to: DTCLPKKNSTSP*GPWSGSVAVRF Trigger: AAACCTGACTGCTACAGATCCCGACCAAGGACCCAATGGGGAGGTAGAGTTCTTCTTTGGCAAGCATGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 72 bp | GCTCATGAGCAGAATCCCTTAGGTGGTCCACACTGGTaGCAAACACGACCTTCAATGAAACTTGGGTCTGCA | + |
Preference number: 6 (lower is better) Translates to: AHEQNPLGGPHW*QTRPSMKLGSA Trigger: TGCAGACCCAAGTTTCATTGAAGGTCGTGTTTGTCACCAGTGTGGACCACCTAAGGGATTCTGCTCATGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 72 bp | CCACTCTTAGTTCTTGGGACAGTTTCCCTATCACCGTaGCAGACGGCACTTCCTCTGTCACTTGGAATTTCA | + |
Preference number: 6 (lower is better) Translates to: PLLVLGTVSLSP*QTALPLSLGIS Trigger: TGAAATTCCAAGTGACAGAGGAAGTGCCGTCTGGCACGGTGATAGGGAAACTGTCCCAAGAACTAAGAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS GCA 72 bp | TCTATGCCAAAGGTGTTCATCACCTCTGGGGACACATaGTTGCCAAAGAAGAACTCTACCTCCCCATTGGGT | + |
Preference number: 6 (lower is better) Translates to: SMPKVFITSGDT*LPKKNSTSPLG Trigger: ACCCAATGGGGAGGTAGAGTTCTTCTTTGGCAAGCATGTGTCCCCAGAGGTGATGAACACCTTTGGCATAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | TTAAAGAGAAAGTTGAAGGTGTCCTGCAGTACCTCCTaGCTCTCTGCCAGTTCTCCCTGGTTGCCTTGGTTA | + |
Preference number: 6 (lower is better) Translates to: LKRKLKVSCSTS*LSASSPWLPWL Trigger: TAACCAAGGCAACCAGGGAGAACTGGCAGAGAGCCAGGAGGTACTGCAGGACACCTTCAACTTTCTCTTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 72 bp | CTTGCCAAAGAAGAACTCTACCTCCCCATTGGGTCCTaGGTCGGGATCTGTAGCAGTCAGGTTTATGAGAAG | + |
Preference number: 6 (lower is better) Translates to: LAKEELYLPIGS*VGICSSQVYEK Trigger: CTTCTCATAAACCTGACTGCTACAGATCCCGACCAAGGACCCAATGGGGAGGTAGAGTTCTTCTTTGGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CAA 90 bp | GAACTCTCAGCAAACACTGGACTATTGTCATTGGAGTCCAGGACATaGACCTTGACCACGCTGATTCCTGACTTAGGGGGATTCCCATTG | + |
Preference number: 6 (lower is better) Translates to: ELSANTGLLSLESRT*TLTTLIPDLGGFPL Trigger: CAATGGGAATCCCCCTAAGTCAGGAATCAGCGTGGTCAAGGTCAATGTCCTGGACTCCAATGACAATAGTCCAGTGTTTGCTGAGAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 72 bp | CCTGCTCGTCTTTGGGAAACTGTGGCTGGTGGTCATTaGTGTCTAGCACCTGAATCTCCACATGAATTAGAG | + |
Preference number: 6 (lower is better) Translates to: PARLWETVAGGH*CLAPESPHELE Trigger: CTCTAATTCATGTGGAGATTCAGGTGCTAGACATCAATGACCACCAGCCACAGTTTCCCAAAGACGAGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | TTGCCAAAGAAGAACTCTACCTCCCCATTGGGTCCTTaGTCGGGATCTGTAGCAGTCAGGTTTATGAGAAGA | + |
Preference number: 6 (lower is better) Translates to: LPKKNSTSPLGP*SGSVAVRFMRR Trigger: TCTTCTCATAAACCTGACTGCTACAGATCCCGACCAAGGACCCAATGGGGAGGTAGAGTTCTTCTTTGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS CCA 72 bp | TGTAGGCCCTATTATCCTTTCTCTCTGTCCTGCAGATaGACACGAACAGGGCTAAGAGCAATCCAAAGATGG | + |
Preference number: 6 (lower is better) Translates to: CRPYYPFSLSCR*TRTGLRAIQRW Trigger: CCATCTTTGGATTGCTCTTAGCCCTGTTCGTGTCCATCTGCAGGACAGAGAGAAAGGATAATAGGGCCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |
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CDS TCA 72 bp | GTGACTTCTCCTGTTTCAAAGTCAATAATGACTAAGTaGGAAACGGGGGAGTCCTTGATACGGTATGACACT | + |
Preference number: 6 (lower is better) Translates to: VTSPVSKSIMTK*ETGESLIRYDT Trigger: AGTGTCATACCGTATCAAGGACTCCCCCGTTTCTCACTTAGTCATTATTGACTTTGAAACAGGAGAAGTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025311.8 |