RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCDH10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049100

Ensembl transcript IDs: ENSMUST00000166126.7, ENSMUST00000170695.4, ENSMUST00000171554.8, ENSMUST00000193252.2

Found 609 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCACTCCCATCCTCCTGCCCTGGTATTCCCCTACACTGGGGTGTTaGACATCCTCAGACCCAATGCCTCCTATCAGATTAAGGCTGGTC +
Preference number: 1 (lower is better)
Translates to: PTPILLPWYSPTLGC*TSSDPMPPIRLRLV
Trigger: GACCAGCCTTAATCTGATAGGAGGCATTGGGTCTGAGGATGTTCAACACCCCAGTGTAGGGGAATACCAGGGCAGGAGGATGGGAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CCA 90 bp GAGTGTATAGGGGGTTGCTGGAGCAGTGGGGCAGAAGAAGATGGGTaGGAACACCATCATAGAGACAAAGAGGAGGGAGTAGAGGGCAGA +
Preference number: 1 (lower is better)
Translates to: ECIGGCWSSGAEEDG*EHHHRDKEEGVEGR
Trigger: TCTGCCCTCTACTCCCTCCTCTTTGTCTCTATGATGGTGTTCCCACCCATCTTCTTCTGCCCCACTGCTCCAGCAACCCCCTATACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR TCA 90 bp TTCTCAGGCCTGCTGAGAGCAATTAGGTCCTACACGTGGCCACGATaGCTCCGCTGGAAATCTAACACTCAGCTACACACAACTAACTGG +
Preference number: 1 (lower is better)
Translates to: FSGLLRAIRSYTWPR*LRWKSNTQLHTTNW
Trigger: CCAGTTAGTTGTGTGTAGCTGAGTGTTAGATTTCCAGCGGAGTCATCGTGGCCACGTGTAGGACCTAATTGCTCTCAGCAGGCCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR TCA 90 bp GGAGTTTCTACAGTCTGCACATTTCAACTCATTTCTCAGGCCTGCTaGGAGCAATTAGGTCCTACACGTGGCCACGATGACTCCGCTGGA +
Preference number: 1 (lower is better)
Translates to: GVSTVCTFQLISQAC*EQLGPTRGHDDSAG
Trigger: TCCAGCGGAGTCATCGTGGCCACGTGTAGGACCTAATTGCTCTCAGCAGGCCTGAGAAATGAGTTGAAATGTGCAGACTGTAGAAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CCA 90 bp TGTAAACAGGCACACACTGATCGGAGAGGCAACACCGGTTGCCTATaGAGTTTCTACAGTCTGCACATTTCAACTCATTTCTCAGGCCTG +
Preference number: 1 (lower is better)
Translates to: CKQAHTDRRGNTGCL*SFYSLHISTHFSGL
Trigger: CAGGCCTGAGAAATGAGTTGAAATGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGTGTGCCTGTTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR TCA 90 bp GGACTGCTGTGGTGCCCAAGAGTTTCTGTGCTTTGGAAACACACATaGTCAACTGGTTTCTTTTTCAAATGGTCCCTCGGAGACACAATG +
Preference number: 1 (lower is better)
Translates to: GLLWCPRVSVLWKHT*STGFFFKWSLGDTM
Trigger: CATTGTGTCTCCGAGGGACCATTTGAAAAAGAAACCAGTTGATCATGTGTGTTTCCAAAGCACAGAAACTCTTGGGCACCACAGCAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CCA 90 bp GAACATCTCCCAGTGGAAGAGAACCCTTTGTTTGTGGTTGAGATCTaGAAAGGTTCACTGTTGCCATGTGACTTTTCTATTCCCCTCTGG +
Preference number: 1 (lower is better)
Translates to: EHLPVEENPLFVVEI*KGSLLPCDFSIPLW
Trigger: CCAGAGGGGAATAGAAAAGTCACATGGCAACAGTGAACCTTTCCAGATCTCAACCACAAACAAAGGGTTCTCTTCCACTGGGAGATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR GCA 90 bp CTCACAGATAATTGTATCAGACATGTCCACAGAACTGAAGCTCGCTaGTCACATTCAGCTCAAGGACATACAGATGTTTGGGAAGTGAGA +
Preference number: 1 (lower is better)
Translates to: LTDNCIRHVHRTEAR*SHSAQGHTDVWEVR
Trigger: TCTCACTTCCCAAACATCTGTATGTCCTTGAGCTGAATGTGAGCAGCGAGCTTCAGTTCTGTGGACATGTCTGATACAATTATCTGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR GCA 90 bp GCCATACACGTGAAAAAGGACTGCTGTGGTGCCCAAGAGTTTCTGTaGTTTGGAAACACACATGATCAACTGGTTTCTTTTTCAAATGGT +
Preference number: 1 (lower is better)
Translates to: AIHVKKDCCGAQEFL*FGNTHDQLVSFSNG
Trigger: ACCATTTGAAAAAGAAACCAGTTGATCATGTGTGTTTCCAAAGCACAGAAACTCTTGGGCACCACAGCAGTCCTTTTTCACGTGTATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR GCA 90 bp GACAGTTGTTCAAGCTTTCAGTTAGTTTACTCTTACAGGATTCTGTaGCAGAGGAACTTCATTCAAATTCACACTGTGTGGGCATTCGGC +
Preference number: 1 (lower is better)
Translates to: DSCSSFQLVYSYRIL*QRNFIQIHTVWAFG
Trigger: GCCGAATGCCCACACAGTGTGAATTTGAATGAAGTTCCTCTGGCACAGAATCCTGTAAGAGTAAACTAACTGAAAGCTTGAACAACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
3UTR TCA 90 bp CTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAAAGTTaGTGCTTTTGTTGGTCGACTCTGTGCAAATCATACTGCTTCGGG +
Preference number: 1 (lower is better)
Translates to: LHTTNWMAKIMKLKS*CFCWSTLCKSYCFG
Trigger: CCCGAAGCAGTATGATTTGCACAGAGTCGACCAACAAAAGCATCAACTTTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR TCA 90 bp AACTTTGAACTAGGAATAGTTGTACCTTCCGTGTCCCCTGGGAACTaGATTCCAGTCTTCTGCAGTAGCATTAAGTGTTCTAAATTGCTA +
Preference number: 1 (lower is better)
Translates to: NFELGIVVPSVSPGN*IPVFCSSIKCSKLL
Trigger: TAGCAATTTAGAACACTTAATGCTACTGCAGAAGACTGGAATTCAGTTCCCAGGGGACACGGAAGGTACAACTATTCCTAGTTCAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR TCA 90 bp TTGAACACAAATAGAATAATCTGTCATTTGAGACTGAAACAGTTCTaGACATGTAGTGGTAGGGACTTGGAGAGGTCGTGGGATGATTCC +
Preference number: 1 (lower is better)
Translates to: LNTNRIICHLRLKQF*TCSGRDLERSWDDS
Trigger: GGAATCATCCCACGACCTCTCCAAGTCCCTACCACTACATGTTCAGAACTGTTTCAGTCTCAAATGACAGATTATTCTATTTGTGTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR CCA 90 bp GAACGGGCAGTGCTGTGTAGAGAGGTTCGTTTCTATATCTCATTTTaGATTGATGTACACGCACCTTTATATCCTTCAGTTCAATATAAC +
Preference number: 1 (lower is better)
Translates to: ERAVLCREVRFYISF*IDVHAPLYPSVQYN
Trigger: GTTATATTGAACTGAAGGATATAAAGGTGCGTGTACATCAATCCAAAATGAGATATAGAAACGAACCTCTCTACACAGCACTGCCCGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR TCA 90 bp ATACACAACTCTGCAAGATTCTACAGTAATATCAATGCCTACTTCTaGGAGCCTATATGTCAAGTACTGCTAGGAATATTTTTCTTCCAT +
Preference number: 1 (lower is better)
Translates to: IHNSARFYSNINAYF*EPICQVLLGIFFFH
Trigger: ATGGAAGAAAAATATTCCTAGCAGTACTTGACATATAGGCTCTCAGAAGTAGGCATTGATATTACTGTAGAATCTTGCAGAGTTGTGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CAA 90 bp ACCCACTCCCATCCTCCTGCCCTGGTATTCCCCTACACTGGGGTGTaGAACATCCTCAGACCCAATGCCTCCTATCAGATTAAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: THSHPPALVFPYTGV*NILRPNASYQIKAG
Trigger: ACCAGCCTTAATCTGATAGGAGGCATTGGGTCTGAGGATGTTCAACACCCCAGTGTAGGGGAATACCAGGGCAGGAGGATGGGAGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR TCA 90 bp CCATTTTCCCTCCAGAGGCCCTCTGCAAGCTCCCCAAGGCCCACACACCTTCCCTGTCCAGAGCAGAATTaGCTTGGTGGTTGTGTTTTT +
Preference number: 2 (lower is better)
Translates to: PFSLQRPSASSPRPTHLPCPEQN*LGGCVF
Trigger: AAAAACACAACCACCAAGTCAATTCTGCTCTGGACA...GGGAAGGTGTGTGGGCCTTGGGGAGCTTGCAGAGGGCCTCTGGAGGGAAAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
3UTR-3UTR GCA 90 bp CCATTTTCCCTCCAGAGGCCCTCTGCAAGCTCCCCAAGGCCCACACACCTTCCCTCTTACAGGATTCTGTaGCAGAGGAACTTCATTCAA +
Preference number: 2 (lower is better)
Translates to: PFSLQRPSASSPRPTHLPSYRIL*QRNFIQ
Trigger: TTGAATGAAGTTCCTCTGGCACAGAATCCTGTAAGA...GGGAAGGTGTGTGGGCCTTGGGGAGCTTGCAGAGGGCCTCTGGAGGGAAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
3UTR-3UTR CCA 90 bp ATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCCCTCTCTTGGTGTCCCATCCTCCTGCCCTaGTATTCCCCTACACTGGGG +
Preference number: 2 (lower is better)
Translates to: IHMVLTTCIIGSSALSWCPILLP*YSPTLG
Trigger: CCCCAGTGTAGGGGAATACCAGGGCAGGAGGATGGG...ACACCAAGAGAGGGCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CCA 90 bp AAGCTCCCCAAGGCCCACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCCAAATTCACACTGTGTaGGCATTCGGCTTCAAGAGC +
Preference number: 2 (lower is better)
Translates to: KLPKAHTPSQSKLCFTRLQIHTV*AFGFKS
Trigger: GCTCTTGAAGCCGAATGCCCACACAGTGTGAATTTG...GAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTGGGCCTTGGGGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
3UTR-3UTR TCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACAATTTCTCAGGCCTGCTaGGAGCAATTAGGTCCTACA +
Preference number: 2 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTISQAC*EQLGPT
Trigger: TGTAGGACCTAATTGCTCTCAGCAGGCCTGAGAAAT...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR TCA 90 bp GGCCCACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCTCCCCACTCCCTTTCAGAGAAGGAACTaGTCACTAAACATGCAATCC +
Preference number: 2 (lower is better)
Translates to: GPHTFPVQTLLYKALPTPFQRRN*SLNMQS
Trigger: GGATTGCATGTTTAGTGATCAGTTCCTTCTCTGAAA...GGGAGTGGGGAGAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
3UTR-3UTR TCA 90 bp ATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCCCTCTCTTGGTGTGTGTCCCCTGGGAACTaGATTCCAGTCTTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: IHMVLTTCIIGSSALSWCVSPGN*IPVFCS
Trigger: ACTGCAGAAGACTGGAATTCAGTTCCCAGGGGACAC...ACACCAAGAGAGGGCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CCA 90 bp AGTGGGGCAGAAGAAGATGGGTGGGAACACCATCATAGAGACAAAGAGGAGGGACTGAACATCTCCCAGTaGAAGAGAACCCTTTGTTTG +
Preference number: 2 (lower is better)
Translates to: SGAEEDGWEHHHRDKEEGLNISQ*KRTLCL
Trigger: CAAACAAAGGGTTCTCTTCCACTGGGAGATGTTCAG...TCCCTCCTCTTTGTCTCTATGATGGTGTTCCCACCCATCTTCTTCTGCCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR TCA 90 bp GAGATCTGGAAAGGTTCACTGTTGCCATGTGACTTTTCTATTCCCCTCTGGCATCAGTTAGTGCCTGGCTaGAGTCTCTCAGATTTGCAG +
Preference number: 2 (lower is better)
Translates to: EIWKGSLLPCDFSIPLWHQLVPG*SLSDLQ
Trigger: CTGCAAATCTGAGAGACTTCAGCCAGGCACTAACTG...ATGCCAGAGGGGAATAGAAAAGTCACATGGCAACAGTGAACCTTTCCAGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CCA 90 bp CATTCAAATTCACACTGTGTGGGCATTCGGCTTCAAGAGCTTGTGTTAAAGCTGACCTTTGTCAGTGATTaGCCCCTCCCCCACACTTCT +
Preference number: 2 (lower is better)
Translates to: HSNSHCVGIRLQELVLKLTFVSD*PLPHTS
Trigger: AGAAGTGTGGGGGAGGGGCCAATCACTGACAAAGGT...CAGCTTTAACACAAGCTCTTGAAGCCGAATGCCCACACAGTGTGAATTTGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
3UTR CAA 90 bp GAAGAGAACCCTTTGTTTGTGGTTGAGATCTGGAAAGGTTCACTGTaGCCATGTGACTTTTCTATTCCCCTCTGGCATGACAGTTTGGGG +
Preference number: 2 (lower is better)
Translates to: EENPLFVVEIWKGSL*PCDFSIPLWHDSLG
Trigger: CCCCAAACTGTCATGCCAGAGGGGAATAGAAAAGTCACATGGCAACAGTGAACCTTTCCAGATCTCAACCACAAACAAAGGGTTCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR TCA 90 bp ATGAGATGTGGATGCTTTGAGCCAATCATCAGACTGAGCTCAGGGACCCTGATGGGAGTAAAATTGAAGTaGCAGTTGAAGAGCAAAGCA +
Preference number: 2 (lower is better)
Translates to: MRCGCFEPIIRLSSGTLMGVKLK*QLKSKA
Trigger: TGCTTTGCTCTTCAACTGTCACTTCAATTTTACTCC...CATCAGGGTCCCTGAGCTCAGTCTGATGATTGGCTCAAAGCATCCACATCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR TCA 90 bp AACACTGGCTACTCTTCCAGAGGTCGTGAATTCAATTCCCAGAATCCACATGGTTTCACTGTTGCCATGTaGCTTTTCTATTCCCCTCTG +
Preference number: 2 (lower is better)
Translates to: NTGYSSRGREFNSQNPHGFTVAM*LFYSPL
Trigger: CAGAGGGGAATAGAAAAGTCACATGGCAACAGTGAA...ACCATGTGGATTCTGGGAATTGAATTCACGACCTCTGGAAGAGTAGCCAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CCA 90 bp ATGAGATGTGGATGCTTTGAGCCAATCATCAGACTGAGCTCAGGGACCCTGATGATCTCACAGTTTGTGTaGTTTGGAATTAGTGCAGCT +
Preference number: 2 (lower is better)
Translates to: MRCGCFEPIIRLSSGTLMISQFV*FGISAA
Trigger: AGCTGCACTAATTCCAAACCACACAAACTGTGAGAT...CATCAGGGTCCCTGAGCTCAGTCTGATGATTGGCTCAAAGCATCCACATCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CCA 90 bp ATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCCCTCTCTTGGTGTGACCATTACATTCCATaGCCTCCACAGTTCTCTATG +
Preference number: 2 (lower is better)
Translates to: IHMVLTTCIIGSSALSWCDHYIP*PPQFSM
Trigger: CATAGAGAACTGTGGAGGCCATGGAATGTAATGGTC...ACACCAAGAGAGGGCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CCA 90 bp GTGTGTAGTGTAGGTGGACGATGCTTCTATGTGAGTGGATGTGTCACAAAATTTCTTTACAGACTAGCTTaGCCCAGACCTTGCCTCAGA +
Preference number: 2 (lower is better)
Translates to: VCSVGGRCFYVSGCVTKFLYRLA*PRPCLR
Trigger: TCTGAGGCAAGGTCTGGGCCAAGCTAGTCTGTAAAG...AAATTTTGTGACACATCCACTCACATAGAAGCATCGTCCACCTACACTACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR-3UTR TCA 90 bp AGAACCCTTTGTTTGTGGTTGAGATCTGGAAAGGTTCACTGTTGCCATGTGACTTATTCCCCTCTGGCATaGCAGTTTGGGGAGATAATT +
Preference number: 2 (lower is better)
Translates to: RTLCLWLRSGKVHCCHVTYSPLA*QFGEII
Trigger: AATTATCTCCCCAAACTGTCATGCCAGAGGGGAATA...AGTCACATGGCAACAGTGAACCTTTCCAGATCTCAACCACAAACAAAGGGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR TCA 90 bp ATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCCCTCTCTTGGTGTGTTGATGGCAAGTTTTaGCTTCACACAGACACACTA +
Preference number: 2 (lower is better)
Translates to: IHMVLTTCIIGSSALSWCVDGKF*LHTDTL
Trigger: TAGTGTGTCTGTGTGAAGTCAAAACTTGCCATCAAC...ACACCAAGAGAGGGCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR TCA 90 bp AGAACCCTTTGTTTGTGGTTGAGATCTGGAAAGGTTCACTGTTGCCATGTGACTAATAGCCACATCACATaGGAGAAGTCAACGCTCATA +
Preference number: 2 (lower is better)
Translates to: RTLCLWLRSGKVHCCHVTNSHIT*EKSTLI
Trigger: TATGAGCGTTGACTTCTCTCATGTGATGTGGCTATT...AGTCACATGGCAACAGTGAACCTTTCCAGATCTCAACCACAAACAAAGGGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR TCA 90 bp ATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCCCTCTCTTGGTGTAGTAATTCCCACAACTaGAAGTCACCAGAGTTAATG +
Preference number: 2 (lower is better)
Translates to: IHMVLTTCIIGSSALSWCSNSHN*KSPELM
Trigger: CATTAACTCTGGTGACTTTCAGTTGTGGGAATTACT...ACACCAAGAGAGGGCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR TCA 90 bp TTCAATTCCCAGAATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCTCTGGATTGCAAACATaGCCATTACATTCCATGGCC +
Preference number: 2 (lower is better)
Translates to: FNSQNPHGAHNMYNWIQCSGLQT*PLHSMA
Trigger: GGCCATGGAATGTAATGGTCATGTTTGCAATCCAGA...GCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGATTCTGGGAATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR GCA 90 bp ATCTATTGTATTAGCTATCTAGGGTTGCTAAAGGAGACTCCCAAGAAGAGAGCAGAAGTCTCTCAGATTTaGAGTCTAGCTGTTGGCTGG +
Preference number: 2 (lower is better)
Translates to: IYCISYLGLLKETPKKRAEVSQI*SLAVGW
Trigger: CCAGCCAACAGCTAGACTGCAAATCTGAGAGACTTC...TGCTCTCTTCTTGGGAGTCTCCTTTAGCAACCCTAGATAGCTAATACAATAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR GCA 90 bp TTTAGAATGTTGTATTTTGGGGGTAGAGAGATGGCTCAGCGATTCAGAACACTGTATAATTGGATCCAGTaGCCTCTCTTGGTGTGTCAG +
Preference number: 2 (lower is better)
Translates to: FRMLYFGGREMAQRFRTLYNWIQ*PLLVCQ
Trigger: CTGACACACCAAGAGAGGGCACTGGATCCAATTATA...CAGTGTTCTGAATCGCTGAGCCATCTCTCTACCCCCAAAATACAACATTCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR GCA 90 bp GTTTACTCTTACAGGATTCTGTGCCAGAGGAACTTCATTCAAATTCACACTGTGATCAAAGGGGTGGAGTaGAGTCAGAACACAGAACAC +
Preference number: 2 (lower is better)
Translates to: VYSYRILCQRNFIQIHTVIKGVE*SQNTEH
Trigger: GTGTTCTGTGTTCTGACTGCACTCCACCCCTTTGAT...CACAGTGTGAATTTGAATGAAGTTCCTCTGGCACAGAATCCTGTAAGAGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
3UTR-3UTR CCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTAACACCGGTTGCCTATaGAGTTTCTACAGTCTGCAC +
Preference number: 2 (lower is better)
Translates to: SIRIKVILLPAILWRHTANTGCL*SFYSLH
Trigger: GTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTT...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR CCA 90 bp TTTAGAATGTTGTATTTTGGGGGTAGAGAGATGGCTCAGCGATTCAGAACACTGGGAAGCTCCCTAGTCTaGATTGCAAACATGACCATT +
Preference number: 2 (lower is better)
Translates to: FRMLYFGGREMAQRFRTLGSSLV*IANMTI
Trigger: AATGGTCATGTTTGCAATCCAGACTAGGGAGCTTCC...CAGTGTTCTGAATCGCTGAGCCATCTCTCTACCCCCAAAATACAACATTCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CAA 90 bp ACAGTCAGATTGAATGTGAAAATTACACTGCCTCTCCGTGATGTGTaGCTGAAGCTACCTGTAGTATTTCATCGCTCTCATTTCACTGCT +
Preference number: 2 (lower is better)
Translates to: TVRLNVKITLPLRDV*LKLPVVFHRSHFTA
Trigger: AGCAGTGAAATGAGAGCGATGAAATACTACAGGTAGCTTCAGCAACACATCACGGAGAGGCAGTGTAATTTTCACATTCAATCTGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR TCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTCTCTCATACATCCTCTaGTTCTTATCCATCCCCTGT +
Preference number: 2 (lower is better)
Translates to: SIRIKVILLPAILWRHTALSYIL*FLSIPC
Trigger: ACAGGGGATGGATAAGAATCAGAGGATGTATGAGAG...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR GCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTTGTTGGTCGACTCTGTaGAAATCATACTGCTTCGGG +
Preference number: 2 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFCWSTL*KSYCFG
Trigger: CCCGAAGCAGTATGATTTGCACAGAGTCGACCAACA...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR CCA 90 bp CTTCCGTGTCCCCTGGGAACTGAATTCCAGTCTTCTGCAGTAGCATTAAGTGTTTTCTATATCTCATTTTaGATTGATGTACACGCACCT +
Preference number: 2 (lower is better)
Translates to: LPCPLGTEFQSSAVALSVFYISF*IDVHAP
Trigger: AGGTGCGTGTACATCAATCCAAAATGAGATATAGAA...AACACTTAATGCTACTGCAGAAGACTGGAATTCAGTTCCCAGGGGACACGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CCA 90 bp TTCAATTCCCAGAATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCTCTGGCATGACAGTTTaGGGAGATAATTCCTTCCTT +
Preference number: 2 (lower is better)
Translates to: FNSQNPHGAHNMYNWIQCSGMTV*GDNSFL
Trigger: AAGGAAGGAATTATCTCCCCAAACTGTCATGCCAGA...GCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGATTCTGGGAATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CCA 90 bp CATTCAAATTCACACTGTGTGGGCATTCGGCTTCAAGAGCTTGTGTTAAAGCTGCAATCTATTGCTTACTaGTACACGCGACTGAAAACA +
Preference number: 2 (lower is better)
Translates to: HSNSHCVGIRLQELVLKLQSIAY*YTRLKT
Trigger: TGTTTTCAGTCGCGTGTACCAGTAAGCAATAGATTG...CAGCTTTAACACAAGCTCTTGAAGCCGAATGCCCACACAGTGTGAATTTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
3UTR CAA 90 bp AACACATGCATGCACACTAAAAGTATTAGAATCAAAGTCATATTATaGCCTGCTATACTCTGGCGGCACACAGCTACCAGCATTCTGACA +
Preference number: 2 (lower is better)
Translates to: NTCMHTKSIRIKVIL*PAILWRHTATSILT
Trigger: TGTCAGAATGCTGGTAGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACTTTTAGTGTGCATGCATGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CAA 90 bp ATTCTACCACTGAGCTCTATGCCACAACTCCTTTTAATTTCTGTTTaGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTTTACAGACTA +
Preference number: 2 (lower is better)
Translates to: ILPLSSMPQLLLISV*RQSSRLGLYTLYRL
Trigger: TAGTCTGTAAAGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGTTGTGGCATAGAGCTCAGTGGTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR-3UTR TCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTGACTGCTCGATGTTTTaGAACTACATCTTCTGTGCT +
Preference number: 2 (lower is better)
Translates to: SIRIKVILLPAILWRHTADCSMF*NYIFCA
Trigger: AGCACAGAAGATGTAGTTTCAAAACATCGAGCAGTC...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR GCA 90 bp GAGATCTGGAAAGGTTCACTGTTGCCATGTGACTTTTCTATTCCCCTCTGGCATAAGAAACACGGCAAGTaGACATCATATATGTTGTTT +
Preference number: 2 (lower is better)
Translates to: EIWKGSLLPCDFSIPLWHKKHGK*TSYMLF
Trigger: AAACAACATATATGATGTGCACTTGCCGTGTTTCTT...ATGCCAGAGGGGAATAGAAAAGTCACATGGCAACAGTGAACCTTTCCAGATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CCA 90 bp TTTAGAATGTTGTATTTTGGGGGTAGAGAGATGGCTCAGCGATTCAGAACACTGTATGATGGATTGTTCTaGAAAGTGGTAACGCTCTTG +
Preference number: 2 (lower is better)
Translates to: FRMLYFGGREMAQRFRTLYDGLF*KVVTLL
Trigger: CAAGAGCGTTACCACTTTCCAGAACAATCCATCATA...CAGTGTTCTGAATCGCTGAGCCATCTCTCTACCCCCAAAATACAACATTCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CAA 90 bp GAGCATGTACACAATATTAGCAGACTGAATATGGAAACAGTCAGATaGAATGTGAAAATTACACTGCCTCTCCGTGATGTGTTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: EHVHNISRLNMETVR*NVKITLPLRDVLLK
Trigger: CTTCAGCAACACATCACGGAGAGGCAGTGTAATTTTCACATTCAATCTGACTGTTTCCATATTCAGTCTGCTAATATTGTGTACATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CAA 90 bp TTGAAGAGCAAAGCAAAGAAACACGGCAAGTGCACATCATATATGTaGTTTGGAAAAATAGCCACATCACATGAGAGAAGTCAACGCTCA +
Preference number: 2 (lower is better)
Translates to: LKSKAKKHGKCTSYM*FGKIATSHERSQRS
Trigger: TGAGCGTTGACTTCTCTCATGTGATGTGGCTATTTTTCCAAACAACATATATGATGTGCACTTGCCGTGTTTCTTTGCTTTGCTCTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CAA 90 bp AACACTCCGTTTTATGATGGATTGTTCTGGAAAGTGGTAACGCTCTaGTTACACTGGATCTCTTGTTTCATATCACAGCCATTCACACTT +
Preference number: 2 (lower is better)
Translates to: NTPFYDGLFWKVVTL*LHWISCFISQPFTL
Trigger: AAGTGTGAATGGCTGTGATATGAAACAAGAGATCCAGTGTAACAAGAGCGTTACCACTTTCCAGAACAATCCATCATAAAACGGAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CAA 90 bp CCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCCCTCTCTaGGTGTGTCAGAAACAGCGTGCTCATTATACAAAAATAAATAAA +
Preference number: 2 (lower is better)
Translates to: PHGAHNMYNWIQCPL*VCQKQRAHYTKINK
Trigger: TTTATTTATTTTTGTATAATGAGCACGCTGTTTCTGACACACCAAGAGAGGGCACTGGATCCAATTATACATGTTGTGAGCACCATGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR TCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTCTGTTTATTGTATGGTaGGGGCTGTATGAATCCATT +
Preference number: 2 (lower is better)
Translates to: SIRIKVILLPAILWRHTALFIVW*GLYESI
Trigger: AATGGATTCATACAGCCCTCACCATACAATAAACAG...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR TCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTGAACAGTTTCACAGATaGCTGCATAAGGGTTTTGTC +
Preference number: 2 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFEQFHR*LHKGFV
Trigger: GACAAAACCCTTATGCAGTCATCTGTGAAACTGTTC...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR TCA 90 bp ATAAATCTCAAAGTTGCACCGTTAGAGTTCTGCATTCATTTCAGATCACCTTACTTCCTCTGTCAAATATaGCATCAGCCAGTTCTACCC +
Preference number: 2 (lower is better)
Translates to: INLKVAPLEFCIHFRSPYFLCQI*HQPVLP
Trigger: GGGTAGAACTGGCTGATGTCATATTTGACAGAGGAA...GTAAGGTGATCTGAAATGAATGCAGAACTCTAACGGTGCAACTTTGAGATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR-3UTR TCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTAACTCTAAACTAATATaGGAAGGGCTAATGACTGCA +
Preference number: 2 (lower is better)
Translates to: SIRIKVILLPAILWRHTANSKLI*EGLMTA
Trigger: TGCAGTCATTAGCCCTTCTCATATTAGTTTAGAGTT...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR CCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTCTACACACAACTAACTaGATGGCCAAGATAATGAAG +
Preference number: 2 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFLHTTN*MAKIMK
Trigger: CTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAG...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR CCA 90 bp ACACTTTGCAACACGGTGTATAAACTACAGAATGTCTTTGATATTTTGTGGGTCAAAGTTGGGATAGTTTaGGGAACACTTGGTCACACA +
Preference number: 2 (lower is better)
Translates to: TLCNTVYKLQNVFDILWVKVGIV*GTLGHT
Trigger: TGTGTGACCAAGTGTTCCCCAAACTATCCCAACTTT...GACCCACAAAATATCAAAGACATTCTGTAGTTTATACACCGTGTTGCAAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR TCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTATGAAGTTGAAAAGTTaGTGCTTTTGTTGGTCGACT +
Preference number: 2 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFMKLKS*CFCWST
Trigger: AGTCGACCAACAAAAGCATCAACTTTTCAACTTCAT...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR TCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTACAAAATTGCCAGTATaGGAAAATATGATTCCCGCA +
Preference number: 2 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFTKLPV*ENMIPA
Trigger: TGCGGGAATCATATTTTCTCATACTGGCAATTTTGT...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR GCA 90 bp CAAACACAACTTTGTAGATTCTATCTGGTGAAACAGGCCTGTCATTTCAGTATGCATTCTGAGACTCAGTaGTTTCAAACTTGTATGTTC +
Preference number: 2 (lower is better)
Translates to: QTQLCRFYLVKQACHFSMHSETQ*FQTCMF
Trigger: GAACATACAAGTTTGAAAGCACTGAGTCTCAGAATG...CATACTGAAATGACAGGCCTGTTTCACCAGATAGAATCTACAAAGTTGTGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR-3UTR TCA 90 bp ATAAATCTCAAAGTTGCACCGTTAGAGTTCTGCATTCATTTCAGATCACCTTACTCAACACAAGACTTATaGCAACCTAATGTACGTCTT +
Preference number: 2 (lower is better)
Translates to: INLKVAPLEFCIHFRSPYSTQDL*QPNVRL
Trigger: AAGACGTACATTAGGTTGTCATAAGTCTTGTGTTGA...GTAAGGTGATCTGAAATGAATGCAGAACTCTAACGGTGCAACTTTGAGATTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR-3UTR GCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTTCTAAGCCAAGTGTTTaGAGAAAATATTCTCTACTG +
Preference number: 2 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFSKPSV*RKYSLL
Trigger: CAGTAGAGAATATTTTCTGCAAACACTTGGCTTAGA...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR CCA 90 bp AAAGTTAAACAATCTATTGCTTACTGGTACACGCGACTGAAAACAGTGATAAACAACTTTATTAATGCCTaGGACAGATGCAAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: KVKQSIAYWYTRLKTVINNFINA*DRCKEK
Trigger: TTTCTCTTTGCATCTGTCCCAGGCATTAATAAAGTT...GTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGATTGTTTAACTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
3UTR TCA 72 bp AAACCCCCTATCTCATTCCCCTTTCGCCTGCCTCTATaGGAGTGCTCAACCACCCACCCACTCCCATCCTCC +
Preference number: 3 (lower is better)
Translates to: KPPISFPFRLPL*ECSTTHPLPSS
Trigger: GGAGGATGGGAGTGGGTGGGTGGTTGAGCACTCTCATAGAGGCAGGCGAAAGGGGAATGAGATAGGGGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR GCA 72 bp CCCTTTGGAAACCCCCTATCTCATTCCCCTTTCGCCTaGCTCTATGAGAGTGCTCAACCACCCACCCACTCC +
Preference number: 3 (lower is better)
Translates to: PFGNPLSHSPFA*LYESAQPPTHS
Trigger: GGAGTGGGTGGGTGGTTGAGCACTCTCATAGAGGCAGGCGAAAGGGGAATGAGATAGGGGGTTTCCAAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CCA 72 bp CCACTCCCATCCTCCTGCCCTGGTATTCCCCTACACTaGGGTGTTGAACATCCTCAGACCCAATGCCTCCTA +
Preference number: 3 (lower is better)
Translates to: PLPSSCPGIPLH*GVEHPQTQCLL
Trigger: TAGGAGGCATTGGGTCTGAGGATGTTCAACACCCCAGTGTAGGGGAATACCAGGGCAGGAGGATGGGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR TCA 72 bp CTGCTGAGAGCAATTAGGTCCTACACGTGGCCACGATaGCTCCGCTGGAAATCTAACACTCAGCTACACACA +
Preference number: 3 (lower is better)
Translates to: LLRAIRSYTWPR*LRWKSNTQLHT
Trigger: TGTGTGTAGCTGAGTGTTAGATTTCCAGCGGAGTCATCGTGGCCACGTGTAGGACCTAATTGCTCTCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR TCA 72 bp ATCCTCCTGCCCTGGTATTCCCCTACACTGGGGTGTTaGACATCCTCAGACCCAATGCCTCCTATCAGATTA +
Preference number: 3 (lower is better)
Translates to: ILLPWYSPTLGC*TSSDPMPPIRL
Trigger: TAATCTGATAGGAGGCATTGGGTCTGAGGATGTTCAACACCCCAGTGTAGGGGAATACCAGGGCAGGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CAA 90 bp GAGATGCCAAGAGTGACTGTCATAACACTGCTCCATTTTCCCTCCAGAGGCCCTAAGAGAAAAAGACCTTaGTCAGTGATTGGCCCCTCC +
Preference number: 3 (lower is better)
Translates to: EMPRVTVITLLHFPSRGPKRKRP*SVIGPS
Trigger: GGAGGGGCCAATCACTGACAAAGGTCTTTTTCTCTT...AGGGCCTCTGGAGGGAAAATGGAGCAGTGTTATGACAGTCACTCTTGGCATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
3UTR TCA 72 bp ACAGTCTGCACATTTCAACTCATTTCTCAGGCCTGCTaGGAGCAATTAGGTCCTACACGTGGCCACGATGAC +
Preference number: 3 (lower is better)
Translates to: TVCTFQLISQAC*EQLGPTRGHDD
Trigger: GTCATCGTGGCCACGTGTAGGACCTAATTGCTCTCAGCAGGCCTGAGAAATGAGTTGAAATGTGCAGACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CCA 72 bp CTGGCTGTATCTGTACTGGGCCTGAACATCTCCCAGTaGAAGAGAACCCTTTGTTTGTGGTTGAGATCTGGA +
Preference number: 3 (lower is better)
Translates to: LAVSVLGLNISQ*KRTLCLWLRSG
Trigger: TCCAGATCTCAACCACAAACAAAGGGTTCTCTTCCACTGGGAGATGTTCAGGCCCAGTACAGATACAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR TCA 72 bp TGGTTTGGAATTAGTGCAGCTCAGTTAGTGCCTGGCTaGAGTCTCTCAGATTTGCAGTCTAGCTGTTGGCTG +
Preference number: 3 (lower is better)
Translates to: WFGISAAQLVPG*SLSDLQSSCWL
Trigger: CAGCCAACAGCTAGACTGCAAATCTGAGAGACTTCAGCCAGGCACTAACTGAGCTGCACTAATTCCAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR TCA 72 bp GCCATCTACATACTCTGGCTGTATCTGTACTGGGCCTaGACATCTCCCAGTGGAAGAGAACCCTTTGTTTGT +
Preference number: 3 (lower is better)
Translates to: AIYILWLYLYWA*TSPSGREPFVC
Trigger: ACAAACAAAGGGTTCTCTTCCACTGGGAGATGTTCAGGCCCAGTACAGATACAGCCAGAGTATGTAGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR GCA 72 bp AAACAGGCACACACTGATCGGAGAGGCAACACCGGTTaGCTATGGAGTTTCTACAGTCTGCACATTTCAACT +
Preference number: 3 (lower is better)
Translates to: KQAHTDRRGNTG*LWSFYSLHIST
Trigger: AGTTGAAATGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGTGTGCCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CCA 72 bp GCACACACTGATCGGAGAGGCAACACCGGTTGCCTATaGAGTTTCTACAGTCTGCACATTTCAACTCATTTC +
Preference number: 3 (lower is better)
Translates to: AHTDRRGNTGCL*SFYSLHISTHF
Trigger: GAAATGAGTTGAAATGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR CAA 90 bp ATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCCCTCTCTTGGTGTGTGGAAGAGAACCCTTaGTTTGTGGTTGAGATCTGG +
Preference number: 3 (lower is better)
Translates to: IHMVLTTCIIGSSALSWCVEENP*FVVEIW
Trigger: CCAGATCTCAACCACAAACAAAGGGTTCTCTTCCAC...ACACCAAGAGAGGGCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR TCA 72 bp AGCGATTCAGAACACTGGCTACTCTTCCAGAGGTCGTaGATTCAATTCCCAGAATCCACATGGTGCTCACAA +
Preference number: 3 (lower is better)
Translates to: SDSEHWLLFQRS*IQFPESTWCSQ
Trigger: TTGTGAGCACCATGTGGATTCTGGGAATTGAATTCACGACCTCTGGAAGAGTAGCCAGTGTTCTGAATCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CCA 72 bp CTGAACATCTCCCAGTGGAAGAGAACCCTTTGTTTGTaGTTGAGATCTGGAAAGGTTCACTGTTGCCATGTG +
Preference number: 3 (lower is better)
Translates to: LNISQWKRTLCL*LRSGKVHCCHV
Trigger: CACATGGCAACAGTGAACCTTTCCAGATCTCAACCACAAACAAAGGGTTCTCTTCCACTGGGAGATGTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CAA 90 bp ATGAGATGTGGATGCTTTGAGCCAATCATCAGACTGAGCTCAGGGACCCTGATGTCTTACTTCCCGTTGTaGGCAATAAAGAATGAAGGT +
Preference number: 3 (lower is better)
Translates to: MRCGCFEPIIRLSSGTLMSYFPL*AIKNEG
Trigger: ACCTTCATTCTTTATTGCCAACAACGGGAAGTAAGA...CATCAGGGTCCCTGAGCTCAGTCTGATGATTGGCTCAAAGCATCCACATCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR TCA 72 bp CTAGGAATAGTTGTACCTTCCGTGTCCCCTGGGAACTaGATTCCAGTCTTCTGCAGTAGCATTAAGTGTTCT +
Preference number: 3 (lower is better)
Translates to: LGIVVPSVSPGN*IPVFCSSIKCS
Trigger: AGAACACTTAATGCTACTGCAGAAGACTGGAATTCAGTTCCCAGGGGACACGGAAGGTACAACTATTCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR GCA 72 bp ATGATGTCAAAAATGGGGAAGCTCCCTAGTCTGGATTaGAAACATGACCATTACATTCCATGGCCTCCACAG +
Preference number: 3 (lower is better)
Translates to: MMSKMGKLPSLD*KHDHYIPWPPQ
Trigger: CTGTGGAGGCCATGGAATGTAATGGTCATGTTTGCAATCCAGACTAGGGAGCTTCCCCATTTTTGACATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CAA 90 bp AGAACCCTTTGTTTGTGGTTGAGATCTGGAAAGGTTCACTGTTGCCATGTGACTATTAGCTATCTAGGGTaGCTAAAGGAGACTCCCAAG +
Preference number: 3 (lower is better)
Translates to: RTLCLWLRSGKVHCCHVTISYLG*LKETPK
Trigger: CTTGGGAGTCTCCTTTAGCAACCCTAGATAGCTAAT...AGTCACATGGCAACAGTGAACCTTTCCAGATCTCAACCACAAACAAAGGGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR GCA 72 bp AATTGTATCAGACATGTCCACAGAACTGAAGCTCGCTaGTCACATTCAGCTCAAGGACATACAGATGTTTGG +
Preference number: 3 (lower is better)
Translates to: NCIRHVHRTEAR*SHSAQGHTDVW
Trigger: CCAAACATCTGTATGTCCTTGAGCTGAATGTGAGCAGCGAGCTTCAGTTCTGTGGACATGTCTGATACAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR GCA 72 bp CTTTGTTTGTGGTTGAGATCTGGAAAGGTTCACTGTTaGCATGTGACTTTTCTATTCCCCTCTGGCATGACA +
Preference number: 3 (lower is better)
Translates to: LCLWLRSGKVHC*HVTFLFPSGMT
Trigger: TGTCATGCCAGAGGGGAATAGAAAAGTCACATGGCAACAGTGAACCTTTCCAGATCTCAACCACAAACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CCA 72 bp CACATAATATGCCATACACGTGAAAAAGGACTGCTGTaGTGCCCAAGAGTTTCTGTGCTTTGGAAACACACA +
Preference number: 3 (lower is better)
Translates to: HIICHTREKGLL*CPRVSVLWKHT
Trigger: TGTGTGTTTCCAAAGCACAGAAACTCTTGGGCACCACAGCAGTCCTTTTTCACGTGTATGGCATATTATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CCA 72 bp CCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTaGTTTGTACACTCTTTACAGACTAGCTTGGCCCAG +
Preference number: 3 (lower is better)
Translates to: PFNFCFEAVIEA*FVHSLQTSLAQ
Trigger: CTGGGCCAAGCTAGTCTGTAAAGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR-3UTR CAA 90 bp ATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCCCTCTCTTGGTGTTGGAAAGGTTCACTGTaGCCATGTGACTTTTCTATT +
Preference number: 3 (lower is better)
Translates to: IHMVLTTCIIGSSALSWCWKGSL*PCDFSI
Trigger: AATAGAAAAGTCACATGGCAACAGTGAACCTTTCCA...ACACCAAGAGAGGGCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR GCA 72 bp GTGAAAAAGGACTGCTGTGGTGCCCAAGAGTTTCTGTaGTTTGGAAACACACATGATCAACTGGTTTCTTTT +
Preference number: 3 (lower is better)
Translates to: VKKDCCGAQEFL*FGNTHDQLVSF
Trigger: AAAAGAAACCAGTTGATCATGTGTGTTTCCAAAGCACAGAAACTCTTGGGCACCACAGCAGTCCTTTTTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR GCA 72 bp TTGTACACTCTTTACAGACTAGCTTGGCCCAGACCTTaGCTCAGAATATTGAGTAGTAGAATACATGTCAGG +
Preference number: 3 (lower is better)
Translates to: LYTLYRLAWPRP*LRILSSRIHVR
Trigger: CCTGACATGTATTCTACTACTCAATATTCTGAGGCAAGGTCTGGGCCAAGCTAGTCTGTAAAGAGTGTACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR CCA 72 bp ATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTaGCGGCACACAGCTACCAGCATTCTGACAGAATGC +
Preference number: 3 (lower is better)
Translates to: IRIKVILLPAIL*RHTATSILTEC
Trigger: GCATTCTGTCAGAATGCTGGTAGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CCA 72 bp CATGTGACTTTTCTATTCCCCTCTGGCATGACAGTTTaGGGAGATAATTCCTTCCTTACAACACTCCGTTTT +
Preference number: 3 (lower is better)
Translates to: HVTFLFPSGMTV*GDNSFLTTLRF
Trigger: AAAACGGAGTGTTGTAAGGAAGGAATTATCTCCCCAAACTGTCATGCCAGAGGGGAATAGAAAAGTCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CCA 72 bp CCTAGTCTGGATTGCAAACATGACCATTACATTCCATaGCCTCCACAGTTCTCTATGAATTGGCATTGGTTT +
Preference number: 3 (lower is better)
Translates to: PSLDCKHDHYIP*PPQFSMNWHWF
Trigger: AAACCAATGCCAATTCATAGAGAACTGTGGAGGCCATGGAATGTAATGGTCATGTTTGCAATCCAGACTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CAA 90 bp TTTAGAATGTTGTATTTTGGGGGTAGAGAGATGGCTCAGCGATTCAGAACACTGAAAGTGGTAACGCTCTaGTTACACTGGATCTCTTGT +
Preference number: 3 (lower is better)
Translates to: FRMLYFGGREMAQRFRTLKVVTL*LHWISC
Trigger: ACAAGAGATCCAGTGTAACAAGAGCGTTACCACTTT...CAGTGTTCTGAATCGCTGAGCCATCTCTCTACCCCCAAAATACAACATTCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CAA 90 bp ATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCCCTCTCTTGGTGTACAGTTCTCTATGAATaGGCATTGGTTTCTGAGTAT +
Preference number: 3 (lower is better)
Translates to: IHMVLTTCIIGSSALSWCTVLYE*ALVSEY
Trigger: ATACTCAGAAACCAATGCCAATTCATAGAGAACTGT...ACACCAAGAGAGGGCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR TCA 72 bp AGTCAGATTGAATGTGAAAATTACACTGCCTCTCCGTaGTGTGTTGCTGAAGCTACCTGTAGTATTTCATCG +
Preference number: 3 (lower is better)
Translates to: SQIECENYTASP*CVAEATCSISS
Trigger: CGATGAAATACTACAGGTAGCTTCAGCAACACATCACGGAGAGGCAGTGTAATTTTCACATTCAATCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR TCA 72 bp GGGGAGATAATTCCTTCCTTACAACACTCCGTTTTATaGTGGATTGTTCTGGAAAGTGGTAACGCTCTTGTT +
Preference number: 3 (lower is better)
Translates to: GEIIPSLQHSVL*WIVLESGNALV
Trigger: AACAAGAGCGTTACCACTTTCCAGAACAATCCATCATAAAACGGAGTGTTGTAAGGAAGGAATTATCTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CCA 72 bp CTTCCTTACAACACTCCGTTTTATGATGGATTGTTCTaGAAAGTGGTAACGCTCTTGTTACACTGGATCTCT +
Preference number: 3 (lower is better)
Translates to: LPYNTPFYDGLF*KVVTLLLHWIS
Trigger: AGAGATCCAGTGTAACAAGAGCGTTACCACTTTCCAGAACAATCCATCATAAAACGGAGTGTTGTAAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CCA 72 bp CTCACAACATGTATAATTGGATCCAGTGCCCTCTCTTaGTGTGTCAGAAACAGCGTGCTCATTATACAAAAA +
Preference number: 3 (lower is better)
Translates to: LTTCIIGSSALS*CVRNSVLIIQK
Trigger: TTTTTGTATAATGAGCACGCTGTTTCTGACACACCAAGAGAGGGCACTGGATCCAATTATACATGTTGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CAA 90 bp TTCAATTCCCAGAATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCGTTACACTGGATCTCTaGTTTCATATCACAGCCATT +
Preference number: 3 (lower is better)
Translates to: FNSQNPHGAHNMYNWIQCVTLDL*FHITAI
Trigger: AATGGCTGTGATATGAAACAAGAGATCCAGTGTAAC...GCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGATTCTGGGAATTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CAA 90 bp TTTAAGTCTCACATTTGTGGACTGTCTCCCACAAGCCTTCCTGTGAAACACTTTCCTTGCCTCAGAATATaGAGTAGTAGAATACATGTC +
Preference number: 3 (lower is better)
Translates to: FKSHICGLSPTSLPVKHFPCLRI*SSRIHV
Trigger: GACATGTATTCTACTACTCAATATTCTGAGGCAAGG...AAAGTGTTTCACAGGAAGGCTTGTGGGAGACAGTCCACAAATGTGAGACTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR-3UTR CAA 90 bp CTGTTAGTGGCTGCAAATGAGAGAGGAGCTGATCAAATGTATTCCTCTGTCAAACTTTTAATTTCTGTTTaGAGGCAGTCATCGAGGCTT +
Preference number: 3 (lower is better)
Translates to: LLVAANERGADQMYSSVKLLISV*RQSSRL
Trigger: AAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAG...TTTGACAGAGGAATACATTTGATCAGCTCCTCTCTCATTTGCAGCCACTAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR-3UTR CAA 90 bp ACATGGATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATACCGTTTTATGATGGATaGTTCTGGAAAGTGGTAACG +
Preference number: 3 (lower is better)
Translates to: TWMLNNALLNDNLVKENIPFYDG*FWKVVT
Trigger: CGTTACCACTTTCCAGAACAATCCATCATAAAACGG...TATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCATCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CAA 90 bp TTTAGAATGTTGTATTTTGGGGGTAGAGAGATGGCTCAGCGATTCAGAACACTGATTAAGTGTTCTAAATaGCTAACCCATCTCTACAGC +
Preference number: 3 (lower is better)
Translates to: FRMLYFGGREMAQRFRTLIKCSK*LTHLYS
Trigger: GCTGTAGAGATGGGTTAGCAATTTAGAACACTTAAT...CAGTGTTCTGAATCGCTGAGCCATCTCTCTACCCCCAAAATACAACATTCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CAA 90 bp CTGTTAGTGGCTGCAAATGAGAGAGGAGCTGATCAAATGTATTCCTCTGTCAAAATCAAAATGCTGCATTaGACACAGAAACTGTCAAGA +
Preference number: 3 (lower is better)
Translates to: LLVAANERGADQMYSSVKIKMLH*TQKLSR
Trigger: TCTTGACAGTTTCTGTGTCAAATGCAGCATTTTGAT...TTTGACAGAGGAATACATTTGATCAGCTCCTCTCTCATTTGCAGCCACTAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR GCA 72 bp TCAAGCTTTCAGTTAGTTTACTCTTACAGGATTCTGTaGCAGAGGAACTTCATTCAAATTCACACTGTGTGG +
Preference number: 3 (lower is better)
Translates to: SSFQLVYSYRIL*QRNFIQIHTVW
Trigger: CCACACAGTGTGAATTTGAATGAAGTTCCTCTGGCACAGAATCCTGTAAGAGTAAACTAACTGAAAGCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
3UTR-3UTR CAA 90 bp ACACTTTGCAACACGGTGTATAAACTACAGAATGTCTTTGATATTTTGTGGGTCAAGTTGATGCTTTTGTaGGTCGACTCTGTGCAAATC +
Preference number: 3 (lower is better)
Translates to: TLCNTVYKLQNVFDILWVKLMLL*VDSVQI
Trigger: GATTTGCACAGAGTCGACCAACAAAAGCATCAACTT...GACCCACAAAATATCAAAGACATTCTGTAGTTTATACACCGTGTTGCAAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR CAA 90 bp ACACTTTGCAACACGGTGTATAAACTACAGAATGTCTTTGATATTTTGTGGGTCGAAAAGTTGATGCTTTaGTTGGTCGACTCTGTGCAA +
Preference number: 3 (lower is better)
Translates to: TLCNTVYKLQNVFDILWVEKLML*LVDSVQ
Trigger: TTGCACAGAGTCGACCAACAAAAGCATCAACTTTTC...GACCCACAAAATATCAAAGACATTCTGTAGTTTATACACCGTGTTGCAAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR-3UTR CAA 90 bp ATAAATCTCAAAGTTGCACCGTTAGAGTTCTGCATTCATTTCAGATCACCTTACGAGTTAGAGGTCAACTaGAAATATACTCCATGGCCA +
Preference number: 3 (lower is better)
Translates to: INLKVAPLEFCIHFRSPYELEVN*KYTPWP
Trigger: TGGCCATGGAGTATATTTCAAGTTGACCTCTAACTC...GTAAGGTGATCTGAAATGAATGCAGAACTCTAACGGTGCAACTTTGAGATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR TCA 72 bp ACTAACTGGATGGCCAAGATAATGAAGTTGAAAAGTTaGTGCTTTTGTTGGTCGACTCTGTGCAAATCATAC +
Preference number: 3 (lower is better)
Translates to: TNWMAKIMKLKS*CFCWSTLCKSY
Trigger: GTATGATTTGCACAGAGTCGACCAACAAAAGCATCAACTTTTCAACTTCATTATCTTGGCCATCCAGTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CCA 72 bp GTGCTGTGTAGAGAGGTTCGTTTCTATATCTCATTTTaGATTGATGTACACGCACCTTTATATCCTTCAGTT +
Preference number: 3 (lower is better)
Translates to: VLCREVRFYISF*IDVHAPLYPSV
Trigger: AACTGAAGGATATAAAGGTGCGTGTACATCAATCCAAAATGAGATATAGAAACGAACCTCTCTACACAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR-3UTR CAA 90 bp ATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATAAAGAAATGTGTCTGTGATTCCTaGAACTTTGAACTAGGAATA +
Preference number: 3 (lower is better)
Translates to: MLNNALLNDNLVKENIKKCVCDS*NFELGI
Trigger: TATTCCTAGTTCAAAGTTCAAGGAATCACAGACACA...TTTCTTTATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR TCA 72 bp TCTGCAAGATTCTACAGTAATATCAATGCCTACTTCTaGGAGCCTATATGTCAAGTACTGCTAGGAATATTT +
Preference number: 3 (lower is better)
Translates to: SARFYSNINAYF*EPICQVLLGIF
Trigger: AAATATTCCTAGCAGTACTTGACATATAGGCTCTCAGAAGTAGGCATTGATATTACTGTAGAATCTTGCAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CCA 72 bp AGGCAACCATATAAAGTTAAACAATCTATTGCTTACTaGTACACGCGACTGAAAACAGTGATAAACAAACCA +
Preference number: 3 (lower is better)
Translates to: RQPYKVKQSIAY*YTRLKTVINKP
Trigger: TGGTTTGTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGATTGTTTAACTTTATATGGTTGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR GCA 90 bp CCATTTTCCCTCCAGAGGCCCTCTGCAAGCTCCCCAAGGCCCACACACCTTCCCCTTACTGGTGGAGAGTaGAGGCTCGCCCCGGTCGCG +
Preference number: 4 (lower is better)
Translates to: PFSLQRPSASSPRPTHLPLTGGE*RLAPVA
Trigger: CGCGACCGGGGCGAGCCTGCACTCTCCACCAGTAAG...GGGAAGGTGTGTGGGCCTTGGGGAGCTTGCAGAGGGCCTCTGGAGGGAAAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR TCA 90 bp CCATTTTCCCTCCAGAGGCCCTCTGCAAGCTCCCCAAGGCCCACACACCTTCCCTGGCGGACTCCGGGGTaGGGCAGACCTGATAGCAAT +
Preference number: 4 (lower is better)
Translates to: PFSLQRPSASSPRPTHLPWRTPG*GRPDSN
Trigger: ATTGCTATCAGGTCTGCCTCACCCCGGAGTCCGCCA...GGGAAGGTGTGTGGGCCTTGGGGAGCTTGCAGAGGGCCTCTGGAGGGAAAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp AAGCTCCCCAAGGCCCACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCCCCGCCCCCGCCCTGTaGCTCCACCGCTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: KLPKAHTPSQSKLCFTRLPAPAL*LHRSIH
Trigger: GTGGATGGAGCGGTGGAGCCACAGGGCGGGGGCGGG...GAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTGGGCCTTGGGGAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp AAGCTCCCCAAGGCCCACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCTTGCGCGCCCGGGCTTaGCGGCCGCAGCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: KLPKAHTPSQSKLCFTRLLRARA*RPQQVE
Trigger: CTCCACCTGCTGCGGCCGCCAAGCCCGGGCGCGCAA...GAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTGGGCCTTGGGGAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR GCA 90 bp GGCCCACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCTCCCCACTCCCCCAAGGGAAAGCGGGTaGCTGGCGTGGCGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GPHTFPVQTLLYKALPTPPRESG*LAWRSL
Trigger: CAGAGAGCGCCACGCCAGGCACCCGCTTTCCCTTGG...GGGAGTGGGGAGAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR GCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACAGGGCTGGAGTCCCGTTaGGCCCCGGAAGGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTGLESR*APEGAP
Trigger: TGGCGCCCCTTCCGGGGCGCAACGGGACTCCAGCCC...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACAGAGGACAGGGGCGGCTaGCCGTGGTCGCGCACCTCG +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTEDRGG*PWSRTS
Trigger: CGAGGTGCGCGACCACGGGCAGCCGCCCCTGTCCTC...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp AAGCTCCCCAAGGCCCACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCCCACCAGGGTGGCTGTaGAGGACAGGGGCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: KLPKAHTPSQSKLCFTRLPPGWL*RTGAAA
Trigger: GGCAGCCGCCCCTGTCCTCCACAGCCACCCTGGTGG...GAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTGGGCCTTGGGGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR GCA 90 bp CCATTTTCCCTCCAGAGGCCCTCTGCAAGCTCCCCAAGGCCCACACACCTTCCCGTTCGGCGAATCGGTTaGCATCTCCCTGGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: PFSLQRPSASSPRPTHLPVRRIG*HLPGSV
Trigger: TACAGACCCAGGGAGATGGCAACCGATTCGCCGAAC...GGGAAGGTGTGTGGGCCTTGGGGAGCTTGCAGAGGGCCTCTGGAGGGAAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR GCA 90 bp CCATTTTCCCTCCAGAGGCCCTCTGCAAGCTCCCCAAGGCCCACACACCTTCCCCTCTCACCAGAACCTTaGAGTGCGCAGGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: PFSLQRPSASSPRPTHLPLSPEP*SAQAQH
Trigger: ATGCTGTGCCTGCGCACTGCAAGGTTCTGGTGAGAG...GGGAAGGTGTGTGGGCCTTGGGGAGCTTGCAGAGGGCCTCTGGAGGGAAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR GCA 90 bp CACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCTCCCCACTCCCCACCGTCGTCCGCGTCCACTaGGGCCACACGAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: HTPSQSKLCFTRLSPLPTVVRVH*GHTSEQ
Trigger: CTGCTCACTCGTGTGGCCGCAGTGGACGCGGACGAC...GGTGGGGAGTGGGGAGAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp CCATTTTCCCTCCAGAGGCCCTCTGCAAGCTCCCCAAGGCCCACACACCTTCCCCTGTTCTCGGTCCAGTaGCTTCTCCAGGACCAGTTC +
Preference number: 4 (lower is better)
Translates to: PFSLQRPSASSPRPTHLPLFSVQ*LLQDQF
Trigger: GAACTGGTCCTGGAGAAGCCACTGGACCGAGAACAG...GGGAAGGTGTGTGGGCCTTGGGGAGCTTGCAGAGGGCCTCTGGAGGGAAAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp ATGAGATGTGGATGCTTTGAGCCAATCATCAGACTGAGCTCAGGGACCCTGATGCAGCACCTCGCGGGCTaGAGTCCCGTTGCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: MRCGCFEPIIRLSSGTLMQHLAG*SPVAPR
Trigger: CCGGGGCGCAACGGGACTCCAGCCCGCGAGGTGCTG...CATCAGGGTCCCTGAGCTCAGTCTGATGATTGGCTCAAAGCATCCACATCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp CACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCTCCCCACTCCCCACCGCTCCATCCACCAGCTaGACCACCAGGGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HTPSQSKLCFTRLSPLPTAPSTS*TTRVAV
Trigger: CACAGCCACCCTGGTGGTTCAGCTGGTGGATGGAGC...GGTGGGGAGTGGGGAGAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR TCA 90 bp CCATTTTCCCTCCAGAGGCCCTCTGCAAGCTCCCCAAGGCCCACACACCTTCCCGCTTGGACATACACCTaGTACACTGGGCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PFSLQRPSASSPRPTHLPAWTYT*YTGLSS
Trigger: TGAAGAGAGCCCAGTGTATCAGGTGTATGTCCAAGC...GGGAAGGTGTGTGGGCCTTGGGGAGCTTGCAGAGGGCCTCTGGAGGGAAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR TCA 90 bp AAGCTCCCCAAGGCCCACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCCGTAGACCGGCTGGCTaGAGCGCGGCGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: KLPKAHTPSQSKLCFTRLRRPAG*SAAHCH
Trigger: ATGACAATGCGCCGCGCTTCAGCCAGCCGGTCTACG...GAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTGGGCCTTGGGGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR TCA 90 bp CCATTTTCCCTCCAGAGGCCCTCTGCAAGCTCCCCAAGGCCCACACACCTTCCCGGGGCGTTGTCGTTCTaGTCCACTATCAAGATGTTG +
Preference number: 4 (lower is better)
Translates to: PFSLQRPSASSPRPTHLPGALSF*STIKML
Trigger: CAACATCTTGATAGTGGATCAGAACGACAACGCCCC...GGGAAGGTGTGTGGGCCTTGGGGAGCTTGCAGAGGGCCTCTGGAGGGAAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR GCA 90 bp AACACTGGCTACTCTTCCAGAGGTCGTGAATTCAATTCCCAGAATCCACATGGTGAGGACAGGGGCGGCTaGCCGTGGTCGCGCACCTCG +
Preference number: 4 (lower is better)
Translates to: NTGYSSRGREFNSQNPHGEDRGG*PWSRTS
Trigger: CGAGGTGCGCGACCACGGGCAGCCGCCCCTGTCCTC...ACCATGTGGATTCTGGGAATTGAATTCACGACCTCTGGAAGAGTAGCCAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp CTCCCATCCTCCTGCCCTGGTATTCCCCTACACTGGGGTGTTGAACATCCTCAGGTTGCTGCGGTAATCTaGAGCCTGGCGTCCATCCGA +
Preference number: 4 (lower is better)
Translates to: LPSSCPGIPLHWGVEHPQVAAVI*SLASIR
Trigger: TCGGATGGACGCCAGGCTGCAGATTACCGCAGCAAC...CTGAGGATGTTCAACACCCCAGTGTAGGGGAATACCAGGGCAGGAGGATGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACAGCTGAACCACCAGGGTaGCTGTGGAGGACAGGGGCG +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTAEPPG*LWRTGA
Trigger: CGCCCCTGTCCTCCACAGCCACCCTGGTGGTTCAGC...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp CTTCCGTGTCCCCTGGGAACTGAATTCCAGTCTTCTGCAGTAGCATTAAGTGTTCGCCGCCAGAGCGGCTaGGACGCAGGTGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPCPLGTEFQSSAVALSVRRQSG*DAGVPQ
Trigger: CTGGGGAACACCTGCGTCCCAGCCGCTCTGGCGGCG...AACACTTAATGCTACTGCAGAAGACTGGAATTCAGTTCCCAGGGGACACGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp AACACTGGCTACTCTTCCAGAGGTCGTGAATTCAATTCCCAGAATCCACATGGTTTGCGCGCCCGGGCTTaGCGGCCGCAGCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: NTGYSSRGREFNSQNPHGLRARA*RPQQVE
Trigger: CTCCACCTGCTGCGGCCGCCAAGCCCGGGCGCGCAA...ACCATGTGGATTCTGGGAATTGAATTCACGACCTCTGGAAGAGTAGCCAGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACACGAGCACTCGGATGGTaGGCAAGGCCGTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTRALGW*ARPCQY
Trigger: GTACTGGCACGGCCTTGCTCACCATCCGAGTGCTCG...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp ATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCCCTCTCTTGGTGTCCAGCGCCTGGGGACTaGCGGCGTCCCGGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: IHMVLTTCIIGSSALSWCPAPGD*RRPGLL
Trigger: TAGAAGCCCGGGACGCCGGCAGTCCCCAGGCGCTGG...ACACCAAGAGAGGGCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp TCAAATTCACACTGTGTGGGCATTCGGCTTCAAGAGCTTGTGTTAAAGCTGTCCCCAGCGCCTGGGGACTaGCGGCGTCCCGGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: SNSHCVGIRLQELVLKLSPAPGD*RRPGLL
Trigger: TAGAAGCCCGGGACGCCGGCAGTCCCCAGGCGCTGG...GGACAGCTTTAACACAAGCTCTTGAAGCCGAATGCCCACACAGTGTGAATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR GCA 90 bp ATTAATGCCTGGGACAGATGCAAAGAGAAAAAGACCTTTGTCAGTGATTGGCCCGAGGACAGGGGCGGCTaGCCGTGGTCGCGCACCTCG +
Preference number: 4 (lower is better)
Translates to: INAWDRCKEKKTFVSDWPEDRGG*PWSRTS
Trigger: CGAGGTGCGCGACCACGGGCAGCCGCCCCTGTCCTC...GGGCCAATCACTGACAAAGGTCTTTTTCTCTTTGCATCTGTCCCAGGCATTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACAAGCGGGTGCCTGGCGTaGCGCTCTCTGAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTSGCLA*RSLRSP
Trigger: TGGAGATCTCAGAGAGCGCCACGCCAGGCACCCGCT...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp AAGCTCCCCAAGGCCCACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCGTTGGTCCCCACGTCTaGGTCGAAGGCGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KLPKAHTPSQSKLCFTRLVGPHV*VEGALQ
Trigger: TTGGAGAGCGCCTTCGACCCAGACGTGGGGACCAAC...GAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTGGGCCTTGGGGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp ATTAATGCCTGGGACAGATGCAAAGAGAAAAAGACCTTTGTCAGTGATTGGCCCCAGCACCTCGCGGGCTaGAGTCCCGTTGCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: INAWDRCKEKKTFVSDWPQHLAG*SPVAPR
Trigger: CCGGGGCGCAACGGGACTCCAGCCCGCGAGGTGCTG...GGGCCAATCACTGACAAAGGTCTTTTTCTCTTTGCATCTGTCCCAGGCATTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp AACACTGGCTACTCTTCCAGAGGTCGTGAATTCAATTCCCAGAATCCACATGGTCCACCAGGGTGGCTGTaGAGGACAGGGGCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NTGYSSRGREFNSQNPHGPPGWL*RTGAAA
Trigger: GGCAGCCGCCCCTGTCCTCCACAGCCACCCTGGTGG...ACCATGTGGATTCTGGGAATTGAATTCACGACCTCTGGAAGAGTAGCCAGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp TCAAATTCACACTGTGTGGGCATTCGGCTTCAAGAGCTTGTGTTAAAGCTGTCCCGCCGCCAGAGCGGCTaGGACGCAGGTGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SNSHCVGIRLQELVLKLSRRQSG*DAGVPQ
Trigger: CTGGGGAACACCTGCGTCCCAGCCGCTCTGGCGGCG...GGACAGCTTTAACACAAGCTCTTGAAGCCGAATGCCCACACAGTGTGAATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR TCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACACCCCGGTCTCCAGATTaGGGTCCAAGTAAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTPRSPD*GPSKGS
Trigger: GGACCCCTTACTTGGACCTCAATCTGGAGACCGGGG...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACATGGCGGACTCCGGGGTaGGGCAGACCTGATAGCAAT +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTWRTPG*GRPDSN
Trigger: ATTGCTATCAGGTCTGCCTCACCCCGGAGTCCGCCA...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp TTCAATTCCCAGAATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCGGGCTGGAGTCCCGTTaGGCCCCGGAAGGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: FNSQNPHGAHNMYNWIQCGLESR*APEGAP
Trigger: TGGCGCCCCTTCCGGGGCGCAACGGGACTCCAGCCC...GCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGATTCTGGGAATTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp CTGTTAGTGGCTGCAAATGAGAGAGGAGCTGATCAAATGTATTCCTCTGTCAAAGGGCTGGAGTCCCGTTaGGCCCCGGAAGGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: LLVAANERGADQMYSSVKGLESR*APEGAP
Trigger: TGGCGCCCCTTCCGGGGCGCAACGGGACTCCAGCCC...TTTGACAGAGGAATACATTTGATCAGCTCCTCTCTCATTTGCAGCCACTAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp TTACAGGATTCTGTGCCAGAGGAACTTCATTCAAATTCACACTGTGTGGGCATTGGGCTGGAGTCCCGTTaGGCCCCGGAAGGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: LQDSVPEELHSNSHCVGIGLESR*APEGAP
Trigger: TGGCGCCCCTTCCGGGGCGCAACGGGACTCCAGCCC...AATGCCCACACAGTGTGAATTTGAATGAAGTTCCTCTGGCACAGAATCCTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR GCA 90 bp TTTAAGTCTCACATTTGTGGACTGTCTCCCACAAGCCTTCCTGTGAAACACTTTGAGGACAGGGGCGGCTaGCCGTGGTCGCGCACCTCG +
Preference number: 4 (lower is better)
Translates to: FKSHICGLSPTSLPVKHFEDRGG*PWSRTS
Trigger: CGAGGTGCGCGACCACGGGCAGCCGCCCCTGTCCTC...AAAGTGTTTCACAGGAAGGCTTGTGGGAGACAGTCCACAAATGTGAGACTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp AAGCTCCCCAAGGCCCACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCAAGGGGTCCGTGAGTTaGCCACCGTCTGAAACCTGC +
Preference number: 4 (lower is better)
Translates to: KLPKAHTPSQSKLCFTRLKGSVS*PPSETC
Trigger: GCAGGTTTCAGACGGTGGCCAACTCACGGACCCCTT...GAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTGGGCCTTGGGGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACACTTCGTCGCGGTCCGTaGCGCTCACCGCGTAAATGT +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTLRRGP*RSPRKC
Trigger: ACATTTACGCGGTGAGCGCCACGGACCGCGACGAAG...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp TTCAATTCCCAGAATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCCCCGCCCCCGCCCTGTaGCTCCACCGCTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: FNSQNPHGAHNMYNWIQCPAPAL*LHRSIH
Trigger: GTGGATGGAGCGGTGGAGCCACAGGGCGGGGGCGGG...GCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGATTCTGGGAATTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp ATGCCACAACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGCCCGCCCCCGCCCTGTaGCTCCACCGCTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: MPQLLLISVLRQSSRLGLPAPAL*LHRSIH
Trigger: GTGGATGGAGCGGTGGAGCCACAGGGCGGGGGCGGG...CAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGTTGTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp ATGCCACAACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGCCACCAGGGTGGCTGTaGAGGACAGGGGCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: MPQLLLISVLRQSSRLGLPPGWL*RTGAAA
Trigger: GGCAGCCGCCCCTGTCCTCCACAGCCACCCTGGTGG...CAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGTTGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp CTGTTAGTGGCTGCAAATGAGAGAGGAGCTGATCAAATGTATTCCTCTGTCAAACGCCGCCAGAGCGGCTaGGACGCAGGTGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLVAANERGADQMYSSVKRRQSG*DAGVPQ
Trigger: CTGGGGAACACCTGCGTCCCAGCCGCTCTGGCGGCG...TTTGACAGAGGAATACATTTGATCAGCTCCTCTCTCATTTGCAGCCACTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTTTGCGCGCCCGGGCTTaGCGGCCGCAGCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSLRARA*RPQQVE
Trigger: CTCCACCTGCTGCGGCCGCCAAGCCCGGGCGCGCAA...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACACGCTCTGCCCCAGGCTaGACTTCTGGAGGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTRSAPG*TSGGSK
Trigger: CTTTGAACCTCCAGAAGTCCAGCCTGGGGCAGAGCG...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp AACACTGGCTACTCTTCCAGAGGTCGTGAATTCAATTCCCAGAATCCACATGGTCGTAGACCGGCTGGCTaGAGCGCGGCGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: NTGYSSRGREFNSQNPHGRRPAG*SAAHCH
Trigger: ATGACAATGCGCCGCGCTTCAGCCAGCCGGTCTACG...ACCATGTGGATTCTGGGAATTGAATTCACGACCTCTGGAAGAGTAGCCAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp CTTCCGTGTCCCCTGGGAACTGAATTCCAGTCTTCTGCAGTAGCATTAAGTGTTGCACTATGCTGTAGGTaGGCCTGGCGTTCTCGCCGT +
Preference number: 4 (lower is better)
Translates to: LPCPLGTEFQSSAVALSVALCCR*AWRSRR
Trigger: ACGGCGAGAACGCCAGGCTCACCTACAGCATAGTGC...AACACTTAATGCTACTGCAGAAGACTGGAATTCAGTTCCCAGGGGACACGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp CTTCCGTGTCCCCTGGGAACTGAATTCCAGTCTTCTGCAGTAGCATTAAGTGTTTGGCGGACTCCGGGGTaGGGCAGACCTGATAGCAAT +
Preference number: 4 (lower is better)
Translates to: LPCPLGTEFQSSAVALSVWRTPG*GRPDSN
Trigger: ATTGCTATCAGGTCTGCCTCACCCCGGAGTCCGCCA...AACACTTAATGCTACTGCAGAAGACTGGAATTCAGTTCCCAGGGGACACGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACAGTTCGGCGAATCGGTTaGCATCTCCCTGGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTVRRIG*HLPGSV
Trigger: TACAGACCCAGGGAGATGGCAACCGATTCGCCGAAC...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACACTCTCACCAGAACCTTaGAGTGCGCAGGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTLSPEP*SAQAQH
Trigger: ATGCTGTGCCTGCGCACTGCAAGGTTCTGGTGAGAG...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTCCAGCGCCTGGGGACTaGCGGCGTCCCGGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: SIRIKVILLPAILWRHTAPAPGD*RRPGLL
Trigger: TAGAAGCCCGGGACGCCGGCAGTCCCCAGGCGCTGG...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTCCAGCGCCTGGGGACTaGCGGCGTCCCGGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSPAPGD*RRPGLL
Trigger: TAGAAGCCCGGGACGCCGGCAGTCCCCAGGCGCTGG...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp ATTAATGCCTGGGACAGATGCAAAGAGAAAAAGACCTTTGTCAGTGATTGGCCCGAAGGGGCGCCACGATaGCGGGGGCGTTGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: INAWDRCKEKKTFVSDWPEGAPR*RGRCRS
Trigger: AGAACGACAACGCCCCCGCCATCGTGGCGCCCCTTC...GGGCCAATCACTGACAAAGGTCTTTTTCTCTTTGCATCTGTCCCAGGCATTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAACAGCACCTCGCGGGCTaGAGTCCCGTTGCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKQHLAG*SPVAPR
Trigger: CCGGGGCGCAACGGGACTCCAGCCCGCGAGGTGCTG...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp AATGCTGCATTTGACACAGAAACTGTCAAGATTACAGTCAGCATAATCCCTTCACAGCACCTCGCGGGCTaGAGTCCCGTTGCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: NAAFDTETVKITVSIIPSQHLAG*SPVAPR
Trigger: CCGGGGCGCAACGGGACTCCAGCCCGCGAGGTGCTG...TGAAGGGATTATGCTGACTGTAATCTTGACAGTTTCTGTGTCAAATGCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTCCCGCCCCCGCCCTGTaGCTCCACCGCTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFPAPAL*LHRSIH
Trigger: GTGGATGGAGCGGTGGAGCCACAGGGCGGGGGCGGG...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAATTGCGCGCCCGGGCTTaGCGGCCGCAGCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKLRARA*RPQQVE
Trigger: CTCCACCTGCTGCGGCCGCCAAGCCCGGGCGCGCAA...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACAAAAGACCTCGGTGTCTaGAACAGAGTCCATGCCGGG +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTKDLGV*NRVHAG
Trigger: CCCGGCATGGACTCTGTTCCAGACACCGAGGTCTTT...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACACCCAGGCTGGACTTCTaGAGGTTCAAAGACCTCGGT +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTPRLDF*RFKDLG
Trigger: ACCGAGGTCTTTGAACCTCCAGAAGTCCAGCCTGGG...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACATCTCTTTGCCGAAAGTaGAGAAGGAGCGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTSLCRK*RRSALP
Trigger: GGGCAGAGCGCTCCTTCTCCACTTTCGGCAAAGAGA...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp CACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCTCCCCACTCCCCACCGGAGGAGATGAGAGATaGTGCTTCTTTCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: HTPSQSKLCFTRLSPLPTGGDER*CFFPFS
Trigger: GCTGAAGGGAAAGAAGCACCATCTCTCATCTCCTCC...GGTGGGGAGTGGGGAGAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
3UTR CAA 72 bp CATCCTCCTGCCCTGGTATTCCCCTACACTGGGGTGTaGAACATCCTCAGACCCAATGCCTCCTATCAGATT +
Preference number: 4 (lower is better)
Translates to: HPPALVFPYTGV*NILRPNASYQI
Trigger: AATCTGATAGGAGGCATTGGGTCTGAGGATGTTCAACACCCCAGTGTAGGGGAATACCAGGGCAGGAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp AGTGGGGCAGAAGAAGATGGGTGGGAACACCATCATAGAGACAAAGAGGAGGGACCATCTTTCGTTAAATaGGCCTCTCCACGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SGAEEDGWEHHHRDKEEGPSFVK*ASPRSC
Trigger: GCAGCTGCGTGGAGAGGCTCATTTAACGAAAGATGG...TCCCTCCTCTTTGTCTCTATGATGGTGTTCCCACCCATCTTCTTCTGCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp AAGCTCCCCAAGGCCCACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCACACAAGAGGGGCTCTaGTTACAGATTTGCTCGCGA +
Preference number: 4 (lower is better)
Translates to: KLPKAHTPSQSKLCFTRLTQEGL*LQICSR
Trigger: TCGCGAGCAAATCTGTAAGCAGAGCCCCTCTTGTGT...GAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTGGGCCTTGGGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR GCA 90 bp TTCAATTCCCAGAATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCCCAAGGGAAAGCGGGTaGCTGGCGTGGCGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: FNSQNPHGAHNMYNWIQCPRESG*LAWRSL
Trigger: CAGAGAGCGCCACGCCAGGCACCCGCTTTCCCTTGG...GCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGATTCTGGGAATTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp TTTAAGTCTCACATTTGTGGACTGTCTCCCACAAGCCTTCCTGTGAAACACTTTCTTACTGGTGGAGAGTaGAGGCTCGCCCCGGTCGCG +
Preference number: 4 (lower is better)
Translates to: FKSHICGLSPTSLPVKHFLTGGE*RLAPVA
Trigger: CGCGACCGGGGCGAGCCTGCACTCTCCACCAGTAAG...AAAGTGTTTCACAGGAAGGCTTGTGGGAGACAGTCCACAAATGTGAGACTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp TTCAATTCCCAGAATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCGTCGTCCGCGTCCACTaGGGCCACACGAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: FNSQNPHGAHNMYNWIQCVVRVH*GHTSEQ
Trigger: CTGCTCACTCGTGTGGCCGCAGTGGACGCGGACGAC...GCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGATTCTGGGAATTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp AAGCTCCCCAAGGCCCACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCAGAGGTTCATTTCGTTaGCCCGCACTATGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: KLPKAHTPSQSKLCFTRLRGSFR*PALCCR
Trigger: CCTACAGCATAGTGCGGGGCAACGAAATGAACCTCT...GAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTGGGCCTTGGGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR GCA 90 bp CACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCTCCCCACTCCCCACCGGAGATGAGAGATGGTaGTTCTTTCCCTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: HTPSQSKLCFTRLSPLPTGDERW*FFPFSL
Trigger: AAGGCTGAAGGGAAAGAAGCACCATCTCTCATCTCC...GGTGGGGAGTGGGGAGAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp ATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCCCTCTCTTGGTGTTGTCAGGTCGGGCTCTaGGAAGGAGGGAGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: IHMVLTTCIIGSSALSWCCQVGL*EGGRVV
Trigger: GACAACCCTCCCTCCTTCCCAGAGCCCGACCTGACA...ACACCAAGAGAGGGCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp AGAACCCTTTGTTTGTGGTTGAGATCTGGAAAGGTTCACTGTTGCCATGTGACTAGCGGGTGCCTGGCGTaGCGCTCTCTGAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: RTLCLWLRSGKVHCCHVTSGCLA*RSLRSP
Trigger: TGGAGATCTCAGAGAGCGCCACGCCAGGCACCCGCT...AGTCACATGGCAACAGTGAACCTTTCCAGATCTCAACCACAAACAAAGGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp CTGAACATCTCCCAGTGGAAGAGAACCCTTTGTTTGTGGTTGAGATCTGGAAAGCTTCGTCGCGGTCCGTaGCGCTCACCGCGTAAATGT +
Preference number: 4 (lower is better)
Translates to: LNISQWKRTLCLWLRSGKLRRGP*RSPRKC
Trigger: ACATTTACGCGGTGAGCGCCACGGACCGCGACGAAG...CTTTCCAGATCTCAACCACAAACAAAGGGTTCTCTTCCACTGGGAGATGTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp GTGTGTAGTGTAGGTGGACGATGCTTCTATGTGAGTGGATGTGTCACAAAATTTGCTGAACCACCAGGGTaGCTGTGGAGGACAGGGGCG +
Preference number: 4 (lower is better)
Translates to: VCSVGGRCFYVSGCVTKFAEPPG*LWRTGA
Trigger: CGCCCCTGTCCTCCACAGCCACCCTGGTGGTTCAGC...AAATTTTGTGACACATCCACTCACATAGAAGCATCGTCCACCTACACTACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp TTACAGGATTCTGTGCCAGAGGAACTTCATTCAAATTCACACTGTGTGGGCATTGCTGAACCACCAGGGTaGCTGTGGAGGACAGGGGCG +
Preference number: 4 (lower is better)
Translates to: LQDSVPEELHSNSHCVGIAEPPG*LWRTGA
Trigger: CGCCCCTGTCCTCCACAGCCACCCTGGTGGTTCAGC...AATGCCCACACAGTGTGAATTTGAATGAAGTTCCTCTGGCACAGAATCCTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTCGCCGCCAGAGCGGCTaGGACGCAGGTGTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFRRQSG*DAGVPQ
Trigger: CTGGGGAACACCTGCGTCCCAGCCGCTCTGGCGGCG...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp AGTGGGGCAGAAGAAGATGGGTGGGAACACCATCATAGAGACAAAGAGGAGGGATCCATACCAGCTGACTaGCCACGGTTGGTGACATCA +
Preference number: 4 (lower is better)
Translates to: SGAEEDGWEHHHRDKEEGSIPAD*PRLVTS
Trigger: TGATGTCACCAACCGTGGCCAGTCAGCTGGTATGGA...TCCCTCCTCTTTGTCTCTATGATGGTGTTCCCACCCATCTTCTTCTGCCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp CTTCCGTGTCCCCTGGGAACTGAATTCCAGTCTTCTGCAGTAGCATTAAGTGTTCGCTCTGCCCCAGGCTaGACTTCTGGAGGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LPCPLGTEFQSSAVALSVRSAPG*TSGGSK
Trigger: CTTTGAACCTCCAGAAGTCCAGCCTGGGGCAGAGCG...AACACTTAATGCTACTGCAGAAGACTGGAATTCAGTTCCCAGGGGACACGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp CATTCAAATTCACACTGTGTGGGCATTCGGCTTCAAGAGCTTGTGTTAAAGCTGTGGCGTGGCGCTCTCTaGGATCTCCACTGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: HSNSHCVGIRLQELVLKLWRGAL*DLHCQV
Trigger: GACCTGACAGTGGAGATCTCAGAGAGCGCCACGCCA...CAGCTTTAACACAAGCTCTTGAAGCCGAATGCCCACACAGTGTGAATTTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR TCA 90 bp AGGAGACTCCCAAGAAGAGAGCAGCATAATCCTGCCATATTTATCTCACAGTTTCGAGCACTCGGATGGTaGGCAAGGCCGTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: RRLPRREQHNPAIFISQFRALGW*ARPCQY
Trigger: GTACTGGCACGGCCTTGCTCACCATCCGAGTGCTCG...AAACTGTGAGATAAATATGGCAGGATTATGCTGCTCTCTTCTTGGGAGTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACAGTGAAATGTGACTACTaGACGAGTACACGACCTCGC +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTVKCDY*TSTRPR
Trigger: GCGAGGTCGTGTACTCGTTCAGTAGTCACATTTCAC...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp TTTAAGTCTCACATTTGTGGACTGTCTCCCACAAGCCTTCCTGTGAAACACTTTCGTAGACCGGCTGGCTaGAGCGCGGCGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: FKSHICGLSPTSLPVKHFRRPAG*SAAHCH
Trigger: ATGACAATGCGCCGCGCTTCAGCCAGCCGGTCTACG...AAAGTGTTTCACAGGAAGGCTTGTGGGAGACAGTCCACAAATGTGAGACTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp GAGATGCCAAGAGTGACTGTCATAACACTGCTCCATTTTCCCTCCAGAGGCCCTTCCCGGGCTTCTACTTaGAAGCTGAAGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: EMPRVTVITLLHFPSRGPSRAST*KLKSLI
Trigger: GATCAAGGACTTCAGCTTTCAAGTAGAAGCCCGGGA...AGGGCCTCTGGAGGGAAAATGGAGCAGTGTTATGACAGTCACTCTTGGCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR TCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACAGGGGCGTTGTCGTTCTaGTCCACTATCAAGATGTTG +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTGALSF*STIKML
Trigger: CAACATCTTGATAGTGGATCAGAACGACAACGCCCC...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp AACACTGGCTACTCTTCCAGAGGTCGTGAATTCAATTCCCAGAATCCACATGGTAAGTGTGAGGTCCAGTaGAGTTTCCCCGCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: NTGYSSRGREFNSQNPHGKCEVQ*SFPAAR
Trigger: TCTGGCGGCGGGGAAACTTCACTGGACCTCACACTT...ACCATGTGGATTCTGGGAATTGAATTCACGACCTCTGGAAGAGTAGCCAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp AGTGGGGCAGAAGAAGATGGGTGGGAACACCATCATAGAGACAAAGAGGAGGGATGTCAACTAGATAGCTaGGCTCTGCTCGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SGAEEDGWEHHHRDKEEGCQLDS*ALLAGV
Trigger: AACACCAGCGAGCAGAGCTCAGCTATCTAGTTGACA...TCCCTCCTCTTTGTCTCTATGATGGTGTTCCCACCCATCTTCTTCTGCCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp ATGAGATGTGGATGCTTTGAGCCAATCATCAGACTGAGCTCAGGGACCCTGATGACTGGCCACGGTTGGTaGCATCATGATCACTGTCTC +
Preference number: 4 (lower is better)
Translates to: MRCGCFEPIIRLSSGTLMTGHGW*HHDHCL
Trigger: GAGACAGTGATCATGATGTCACCAACCGTGGCCAGT...CATCAGGGTCCCTGAGCTCAGTCTGATGATTGGCTCAAAGCATCCACATCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTCCAAGGGAAAGCGGGTaGCTGGCGTGGCGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSPRESG*LAWRSL
Trigger: CAGAGAGCGCCACGCCAGGCACCCGCTTTCCCTTGG...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp CTTCCGTGTCCCCTGGGAACTGAATTCCAGTCTTCTGCAGTAGCATTAAGTGTTCTCTCACCAGAACCTTaGAGTGCGCAGGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: LPCPLGTEFQSSAVALSVLSPEP*SAQAQH
Trigger: ATGCTGTGCCTGCGCACTGCAAGGTTCTGGTGAGAG...AACACTTAATGCTACTGCAGAAGACTGGAATTCAGTTCCCAGGGGACACGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp GAGATCTGGAAAGGTTCACTGTTGCCATGTGACTTTTCTATTCCCCTCTGGCATAGCTCACACTGCACCTaGCCGTTCTCCTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: EIWKGSLLPCDFSIPLWHSSHCT*PFSSES
Trigger: GGACTCAGAGGAGAACGGGCAGGTGCAGTGTGAGCT...ATGCCAGAGGGGAATAGAAAAGTCACATGGCAACAGTGAACCTTTCCAGATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp ATCTATTGTATTAGCTATCTAGGGTTGCTAAAGGAGACTCCCAAGAAGAGAGCACTTACTGGTGGAGAGTaGAGGCTCGCCCCGGTCGCG +
Preference number: 4 (lower is better)
Translates to: IYCISYLGLLKETPKKRALTGGE*RLAPVA
Trigger: CGCGACCGGGGCGAGCCTGCACTCTCCACCAGTAAG...TGCTCTCTTCTTGGGAGTCTCCTTTAGCAACCCTAGATAGCTAATACAATAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp CATTCAAATTCACACTGTGTGGGCATTCGGCTTCAAGAGCTTGTGTTAAAGCTGAGGTGGAGCTCCCATTaGCGCAGCAGCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: HSNSHCVGIRLQELVLKLRWSSH*RSSSSR
Trigger: TCTGCTGCTGCTGCTGCGGCAATGGGAGCTCCACCT...CAGCTTTAACACAAGCTCTTGAAGCCGAATGCCCACACAGTGTGAATTTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp TCAAATTCACACTGTGTGGGCATTCGGCTTCAAGAGCTTGTGTTAAAGCTGTCCCGGGCACATTGTCGTTaGAGTCGAGCACTCGGATGG +
Preference number: 4 (lower is better)
Translates to: SNSHCVGIRLQELVLKLSRAHCR*SRALGW
Trigger: CCATCCGAGTGCTCGACTCCAACGACAATGTGCCCG...GGACAGCTTTAACACAAGCTCTTGAAGCCGAATGCCCACACAGTGTGAATTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp GGCCCACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCTCCCCACTCCCAAGACACTCATTCCTTaGATCTGGCACTCTAGGATA +
Preference number: 4 (lower is better)
Translates to: GPHTFPVQTLLYKALPTPKTLIP*IWHSRI
Trigger: TATCCTAGAGTGCCAGATCCAAGGAATGAGTGTCTT...GGGAGTGGGGAGAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp ACACTTTGCAACACGGTGTATAAACTACAGAATGTCTTTGATATTTTGTGGGTCCCACCAGGGTGGCTGTaGAGGACAGGGGCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TLCNTVYKLQNVFDILWVPPGWL*RTGAAA
Trigger: GGCAGCCGCCCCTGTCCTCCACAGCCACCCTGGTGG...GACCCACAAAATATCAAAGACATTCTGTAGTTTATACACCGTGTTGCAAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp ATCTATTGTATTAGCTATCTAGGGTTGCTAAAGGAGACTCCCAAGAAGAGAGCAGCTGAACCACCAGGGTaGCTGTGGAGGACAGGGGCG +
Preference number: 4 (lower is better)
Translates to: IYCISYLGLLKETPKKRAAEPPG*LWRTGA
Trigger: CGCCCCTGTCCTCCACAGCCACCCTGGTGGTTCAGC...TGCTCTCTTCTTGGGAGTCTCCTTTAGCAACCCTAGATAGCTAATACAATAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp AACACTGGCTACTCTTCCAGAGGTCGTGAATTCAATTCCCAGAATCCACATGGTCAAGTAAGGGGTCCGTaGGTTGGCCACCGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: NTGYSSRGREFNSQNPHGQVRGP*VGHRLK
Trigger: TTTCAGACGGTGGCCAACTCACGGACCCCTTACTTG...ACCATGTGGATTCTGGGAATTGAATTCACGACCTCTGGAAGAGTAGCCAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp GTGTGTAGTGTAGGTGGACGATGCTTCTATGTGAGTGGATGTGTCACAAAATTTTGGCGTGGCGCTCTCTaGGATCTCCACTGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: VCSVGGRCFYVSGCVTKFWRGAL*DLHCQV
Trigger: GACCTGACAGTGGAGATCTCAGAGAGCGCCACGCCA...AAATTTTGTGACACATCCACTCACATAGAAGCATCGTCCACCTACACTACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTCGTAGACCGGCTGGCTaGAGCGCGGCGCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: SIRIKVILLPAILWRHTARRPAG*SAAHCH
Trigger: ATGACAATGCGCCGCGCTTCAGCCAGCCGGTCTACG...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTGCTCCATCCACCAGCTaGACCACCAGGGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SIRIKVILLPAILWRHTAAPSTS*TTRVAV
Trigger: CACAGCCACCCTGGTGGTTCAGCTGGTGGATGGAGC...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTTGGCCAGCAGGAAGATaGAGGACACCGAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSWPAGR*RTPSPG
Trigger: CCCTGGGCTCGGTGTCCTTCATCTTCCTGCTGGCCA...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAACCAAGGGAAAGCGGGTaGCTGGCGTGGCGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKPRESG*LAWRSL
Trigger: CAGAGAGCGCCACGCCAGGCACCCGCTTTCCCTTGG...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp CTGAACATCTCCCAGTGGAAGAGAACCCTTTGTTTGTGGTTGAGATCTGGAAAGACCAGAACCTTGCAGTaGGCAGGCACAGCATTGGGA +
Preference number: 4 (lower is better)
Translates to: LNISQWKRTLCLWLRSGKTRTLQ*AGTALG
Trigger: TCCCAATGCTGTGCCTGCGCACTGCAAGGTTCTGGT...CTTTCCAGATCTCAACCACAAACAAAGGGTTCTCTTCCACTGGGAGATGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAACTTACTGGTGGAGAGTaGAGGCTCGCCCCGGTCGCG +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKLTGGE*RLAPVA
Trigger: CGCGACCGGGGCGAGCCTGCACTCTCCACCAGTAAG...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAAGTCGTCCGCGTCCACTaGGGCCACACGAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKVVRVH*GHTSEQ
Trigger: CTGCTCACTCGTGTGGCCGCAGTGGACGCGGACGAC...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp CAAACACAACTTTGTAGATTCTATCTGGTGAAACAGGCCTGTCATTTCAGTATGGTCGTCCGCGTCCACTaGGGCCACACGAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QTQLCRFYLVKQACHFSMVVRVH*GHTSEQ
Trigger: CTGCTCACTCGTGTGGCCGCAGTGGACGCGGACGAC...CATACTGAAATGACAGGCCTGTTTCACCAGATAGAATCTACAAAGTTGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp TTTAAGTCTCACATTTGTGGACTGTCTCCCACAAGCCTTCCTGTGAAACACTTTAGGTGGAGCTCCCATTaGCGCAGCAGCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: FKSHICGLSPTSLPVKHFRWSSH*RSSSSR
Trigger: TCTGCTGCTGCTGCTGCGGCAATGGGAGCTCCACCT...AAAGTGTTTCACAGGAAGGCTTGTGGGAGACAGTCCACAAATGTGAGACTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTGGAGAAGGAGCGCTCTaGCCCAGGCTGGACTTCTGG +
Preference number: 4 (lower is better)
Translates to: SIRIKVILLPAILWRHTAGEGAL*PRLDFW
Trigger: CCAGAAGTCCAGCCTGGGGCAGAGCGCTCCTTCTCC...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp AACACTGGCTACTCTTCCAGAGGTCGTGAATTCAATTCCCAGAATCCACATGGTGCAGGGCCTTCTCTTTaGCGAAAGTGGAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: NTGYSSRGREFNSQNPHGAGPSL*RKWRRS
Trigger: GCTCCTTCTCCACTTTCGGCAAAGAGAAGGCCCTGC...ACCATGTGGATTCTGGGAATTGAATTCACGACCTCTGGAAGAGTAGCCAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp TTCAATTCCCAGAATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCCTCTCCAGGGTGCCATaGAGGGCCTTCTCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: FNSQNPHGAHNMYNWIQCLSRVP*RAFSLP
Trigger: CGGCAAAGAGAAGGCCCTGCATGGCACCCTGGAGAG...GCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGATTCTGGGAATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp TTTAAGTCTCACATTTGTGGACTGTCTCCCACAAGCCTTCCTGTGAAACACTTTCTCTCCAGGGTGCCATaGAGGGCCTTCTCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: FKSHICGLSPTSLPVKHFLSRVP*RAFSLP
Trigger: CGGCAAAGAGAAGGCCCTGCATGGCACCCTGGAGAG...AAAGTGTTTCACAGGAAGGCTTGTGGGAGACAGTCCACAAATGTGAGACTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp ATGAGATGTGGATGCTTTGAGCCAATCATCAGACTGAGCTCAGGGACCCTGATGGCCTCTCCACGCAGCTaGATCCACAGCATTTTCAAA +
Preference number: 4 (lower is better)
Translates to: MRCGCFEPIIRLSSGTLMASPRS*IHSIFK
Trigger: TTTGAAAATGCTGTGGATGCAGCTGCGTGGAGAGGC...CATCAGGGTCCCTGAGCTCAGTCTGATGATTGGCTCAAAGCATCCACATCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp AGAACCCTTTGTTTGTGGTTGAGATCTGGAAAGGTTCACTGTTGCCATGTGACTAAGGGGTCCGTGAGTTaGCCACCGTCTGAAACCTGC +
Preference number: 4 (lower is better)
Translates to: RTLCLWLRSGKVHCCHVTKGSVS*PPSETC
Trigger: GCAGGTTTCAGACGGTGGCCAACTCACGGACCCCTT...AGTCACATGGCAACAGTGAACCTTTCCAGATCTCAACCACAAACAAAGGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTAGCGGGTGCCTGGCGTaGCGCTCTCTGAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSSGCLA*RSLRSP
Trigger: TGGAGATCTCAGAGAGCGCCACGCCAGGCACCCGCT...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp GTGTGTAGTGTAGGTGGACGATGCTTCTATGTGAGTGGATGTGTCACAAAATTTGTTGGTCCCCACGTCTaGGTCGAAGGCGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: VCSVGGRCFYVSGCVTKFVGPHV*VEGALQ
Trigger: TTGGAGAGCGCCTTCGACCCAGACGTGGGGACCAAC...AAATTTTGTGACACATCCACTCACATAGAAGCATCGTCCACCTACACTACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp TTTAGAATGTTGTATTTTGGGGGTAGAGAGATGGCTCAGCGATTCAGAACACTGGGATCGACTTACTGGTaGAGAGTGCAGGCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: FRMLYFGGREMAQRFRTLGSTYW*RVQARP
Trigger: GGGGCGAGCCTGCACTCTCCACCAGTAAGTCGATCC...CAGTGTTCTGAATCGCTGAGCCATCTCTCTACCCCCAAAATACAACATTCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp CTGTTAGTGGCTGCAAATGAGAGAGGAGCTGATCAAATGTATTCCTCTGTCAAAGGATCGACTTACTGGTaGAGAGTGCAGGCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: LLVAANERGADQMYSSVKGSTYW*RVQARP
Trigger: GGGGCGAGCCTGCACTCTCCACCAGTAAGTCGATCC...TTTGACAGAGGAATACATTTGATCAGCTCCTCTCTCATTTGCAGCCACTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp AGAACCCTTTGTTTGTGGTTGAGATCTGGAAAGGTTCACTGTTGCCATGTGACTCCTGGATCGACTTACTaGTGGAGAGTGCAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: RTLCLWLRSGKVHCCHVTPGSTY*WRVQAR
Trigger: GCGAGCCTGCACTCTCCACCAGTAAGTCGATCCAGG...AGTCACATGGCAACAGTGAACCTTTCCAGATCTCAACCACAAACAAAGGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp ATGCCACAACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGCTTCGTCGCGGTCCGTaGCGCTCACCGCGTAAATGT +
Preference number: 4 (lower is better)
Translates to: MPQLLLISVLRQSSRLGLLRRGP*RSPRKC
Trigger: ACATTTACGCGGTGAGCGCCACGGACCGCGACGAAG...CAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGTTGTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp AGACTGTTAGGAACGACAGTCTCTGCAGTTAAAGATTCTTCAACATCTGTTAGAGAAGGGGCGCCACGATaGCGGGGGCGTTGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: RLLGTTVSAVKDSSTSVREGAPR*RGRCRS
Trigger: AGAACGACAACGCCCCCGCCATCGTGGCGCCCCTTC...TCTAACAGATGTTGAAGAATCTTTAACTGCAGAGACTGTCGTTCCTAACAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAAGAAGGGGCGCCACGATaGCGGGGGCGTTGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKEGAPR*RGRCRS
Trigger: AGAACGACAACGCCCCCGCCATCGTGGCGCCCCTTC...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp CAAACACAACTTTGTAGATTCTATCTGGTGAAACAGGCCTGTCATTTCAGTATGGAAGGGGCGCCACGATaGCGGGGGCGTTGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: QTQLCRFYLVKQACHFSMEGAPR*RGRCRS
Trigger: AGAACGACAACGCCCCCGCCATCGTGGCGCCCCTTC...CATACTGAAATGACAGGCCTGTTTCACCAGATAGAATCTACAAAGTTGTGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp CTGAACATCTCCCAGTGGAAGAGAACCCTTTGTTTGTGGTTGAGATCTGGAAAGAAAGACCTCGGTGTCTaGAACAGAGTCCATGCCGGG +
Preference number: 4 (lower is better)
Translates to: LNISQWKRTLCLWLRSGKKDLGV*NRVHAG
Trigger: CCCGGCATGGACTCTGTTCCAGACACCGAGGTCTTT...CTTTCCAGATCTCAACCACAAACAAAGGGTTCTCTTCCACTGGGAGATGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACATTTCCGCGTCAAATATaGTGGTTTGTAAGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTFPRQI*WFVRRS
Trigger: CGAGCGCCTTACAAACCACCATATTTGACGCGGAAA...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTCCCCGGTCTCCAGATTaGGGTCCAAGTAAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSPRSPD*GPSKGS
Trigger: GGACCCCTTACTTGGACCTCAATCTGGAGACCGGGG...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp AATGCTGCATTTGACACAGAAACTGTCAAGATTACAGTCAGCATAATCCCTTCACGAGCACTCGGATGGTaGGCAAGGCCGTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: NAAFDTETVKITVSIIPSRALGW*ARPCQY
Trigger: GTACTGGCACGGCCTTGCTCACCATCCGAGTGCTCG...TGAAGGGATTATGCTGACTGTAATCTTGACAGTTTCTGTGTCAAATGCAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACATTCACATCTGACACTTaGACCTGGATCGACTTACTG +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTFTSDT*TWIDLL
Trigger: CAGTAAGTCGATCCAGGTTCAAGTGTCAGATGTGAA...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTGCACTATGCTGTAGGTaGGCCTGGCGTTCTCGCCGT +
Preference number: 4 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSALCCR*AWRSRR
Trigger: ACGGCGAGAACGCCAGGCTCACCTACAGCATAGTGC...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp ACATGGATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATAGCTCCATCCACCAGCTaGACCACCAGGGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TWMLNNALLNDNLVKENIAPSTS*TTRVAV
Trigger: CACAGCCACCCTGGTGGTTCAGCTGGTGGATGGAGC...TATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCATCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp AATGCTGCATTTGACACAGAAACTGTCAAGATTACAGTCAGCATAATCCCTTCAGCTCCATCCACCAGCTaGACCACCAGGGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: NAAFDTETVKITVSIIPSAPSTS*TTRVAV
Trigger: CACAGCCACCCTGGTGGTTCAGCTGGTGGATGGAGC...TGAAGGGATTATGCTGACTGTAATCTTGACAGTTTCTGTGTCAAATGCAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp AGACTGTTAGGAACGACAGTCTCTGCAGTTAAAGATTCTTCAACATCTGTTAGATGGCCAGCAGGAAGATaGAGGACACCGAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RLLGTTVSAVKDSSTSVRWPAGR*RTPSPG
Trigger: CCCTGGGCTCGGTGTCCTTCATCTTCCTGCTGGCCA...TCTAACAGATGTTGAAGAATCTTTAACTGCAGAGACTGTCGTTCCTAACAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAATGGCCAGCAGGAAGATaGAGGACACCGAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKWPAGR*RTPSPG
Trigger: CCCTGGGCTCGGTGTCCTTCATCTTCCTGCTGGCCA...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTTGGCGGACTCCGGGGTaGGGCAGACCTGATAGCAAT +
Preference number: 4 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSWRTPG*GRPDSN
Trigger: ATTGCTATCAGGTCTGCCTCACCCCGGAGTCCGCCA...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp TCAAATTCACACTGTGTGGGCATTCGGCTTCAAGAGCTTGTGTTAAAGCTGTCCTGCTTCCGTTGGAAATaGTGTCTGGTTGCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: SNSHCVGIRLQELVLKLSCFRWK*CLVAGR
Trigger: GCGACCAGCAACCAGACATCATTTCCAACGGAAGCA...GGACAGCTTTAACACAAGCTCTTGAAGCCGAATGCCCACACAGTGTGAATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR GCA 90 bp ATCTATTGTATTAGCTATCTAGGGTTGCTAAAGGAGACTCCCAAGAAGAGAGCAAGGTGGAGCTCCCATTaGCGCAGCAGCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: IYCISYLGLLKETPKKRARWSSH*RSSSSR
Trigger: TCTGCTGCTGCTGCTGCGGCAATGGGAGCTCCACCT...TGCTCTCTTCTTGGGAGTCTCCTTTAGCAACCCTAGATAGCTAATACAATAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp AGACTGTTAGGAACGACAGTCTCTGCAGTTAAAGATTCTTCAACATCTGTTAGAGGAGAAGGAGCGCTCTaGCCCAGGCTGGACTTCTGG +
Preference number: 4 (lower is better)
Translates to: RLLGTTVSAVKDSSTSVRGEGAL*PRLDFW
Trigger: CCAGAAGTCCAGCCTGGGGCAGAGCGCTCCTTCTCC...TCTAACAGATGTTGAAGAATCTTTAACTGCAGAGACTGTCGTTCCTAACAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp TTCAATTCCCAGAATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCCCTTCCTCTCCAGGGTaGCATGCAGGGCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: FNSQNPHGAHNMYNWIQCPSSPG*HAGPSL
Trigger: AAGAGAAGGCCCTGCATGGCACCCTGGAGAGGAAGG...GCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGATTCTGGGAATTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp ATGCCACAACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGAGTCTCGCAAGGAGTTaGTCCCCACGTCTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: MPQLLLISVLRQSSRLGLSLARS*SPRLGR
Trigger: TCGACCCAGACGTGGGGACCAACTCCTTGCGAGACT...CAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGTTGTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTGGATCGACTTACTGGTaGAGAGTGCAGGCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: SIRIKVILLPAILWRHTAGSTYW*RVQARP
Trigger: GGGGCGAGCCTGCACTCTCCACCAGTAAGTCGATCC...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp GTGTGTAGTGTAGGTGGACGATGCTTCTATGTGAGTGGATGTGTCACAAAATTTCCTGGATCGACTTACTaGTGGAGAGTGCAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: VCSVGGRCFYVSGCVTKFPGSTY*WRVQAR
Trigger: GCGAGCCTGCACTCTCCACCAGTAAGTCGATCCAGG...AAATTTTGTGACACATCCACTCACATAGAAGCATCGTCCACCTACACTACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp GTGTGTAGTGTAGGTGGACGATGCTTCTATGTGAGTGGATGTGTCACAAAATTTCGCTCTGCCCCAGGCTaGACTTCTGGAGGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: VCSVGGRCFYVSGCVTKFRSAPG*TSGGSK
Trigger: CTTTGAACCTCCAGAAGTCCAGCCTGGGGCAGAGCG...AAATTTTGTGACACATCCACTCACATAGAAGCATCGTCCACCTACACTACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR CAA 72 bp GGCCTGAACATCTCCCAGTGGAAGAGAACCCTTTGTTaGTGGTTGAGATCTGGAAAGGTTCACTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: GLNISQWKRTLC*WLRSGKVHCCH
Trigger: ATGGCAACAGTGAACCTTTCCAGATCTCAACCACAAACAAAGGGTTCTCTTCCACTGGGAGATGTTCAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CAA 72 bp ACTGGGCCTGAACATCTCCCAGTGGAAGAGAACCCTTaGTTTGTGGTTGAGATCTGGAAAGGTTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: TGPEHLPVEENP*FVVEIWKGSLL
Trigger: CAACAGTGAACCTTTCCAGATCTCAACCACAAACAAAGGGTTCTCTTCCACTGGGAGATGTTCAGGCCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp AGACTGTTAGGAACGACAGTCTCTGCAGTTAAAGATTCTTCAACATCTGTTAGACCCCGGTCTCCAGATTaGGGTCCAAGTAAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RLLGTTVSAVKDSSTSVRPRSPD*GPSKGS
Trigger: GGACCCCTTACTTGGACCTCAATCTGGAGACCGGGG...TCTAACAGATGTTGAAGAATCTTTAACTGCAGAGACTGTCGTTCCTAACAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp TCTATTGCTTACTGGTACACGCGACTGAAAACAGTGATAAACAAACCAAAATGGCCCCGGTCTCCAGATTaGGGTCCAAGTAAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SIAYWYTRLKTVINKPKWPRSPD*GPSKGS
Trigger: GGACCCCTTACTTGGACCTCAATCTGGAGACCGGGG...CCATTTTGGTTTGTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR TCA 90 bp ACATGGATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATATGGCGTGGCGCTCTCTaGGATCTCCACTGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: TWMLNNALLNDNLVKENIWRGAL*DLHCQV
Trigger: GACCTGACAGTGGAGATCTCAGAGAGCGCCACGCCA...TATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCATCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTTGGCGTGGCGCTCTCTaGGATCTCCACTGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFWRGAL*DLHCQV
Trigger: GACCTGACAGTGGAGATCTCAGAGAGCGCCACGCCA...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTAAGTGTGAGGTCCAGTaGAGTTTCCCCGCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSKCEVQ*SFPAAR
Trigger: TCTGGCGGCGGGGAAACTTCACTGGACCTCACACTT...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp AAACAATCTATTGCTTACTGGTACACGCGACTGAAAACAGTGATAAACAAACCATGGCCAGCAGGAAGATaGAGGACACCGAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: KQSIAYWYTRLKTVINKPWPAGR*RTPSPG
Trigger: CCCTGGGCTCGGTGTCCTTCATCTTCCTGCTGGCCA...TGGTTTGTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGATTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR TCA 90 bp AAGCTCCCCAAGGCCCACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCCACCAACATGATATCTaGCTTGCTGAGTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KLPKAHTPSQSKLCFTRLHQHDI*LAEFLL
Trigger: AAGAAGAAACTCAGCAAGTCAGATATCATGTTGGTG...GAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTGGGCCTTGGGGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR GCA 90 bp GAGATCTGGAAAGGTTCACTGTTGCCATGTGACTTTTCTATTCCCCTCTGGCATACACAAGAGGGGCTCTaGTTACAGATTTGCTCGCGA +
Preference number: 4 (lower is better)
Translates to: EIWKGSLLPCDFSIPLWHTQEGL*LQICSR
Trigger: TCGCGAGCAAATCTGTAAGCAGAGCCCCTCTTGTGT...ATGCCAGAGGGGAATAGAAAAGTCACATGGCAACAGTGAACCTTTCCAGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp ATGCCACAACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGGTTCGGCGAATCGGTTaGCATCTCCCTGGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: MPQLLLISVLRQSSRLGLVRRIG*HLPGSV
Trigger: TACAGACCCAGGGAGATGGCAACCGATTCGCCGAAC...CAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGTTGTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp TTACAGGATTCTGTGCCAGAGGAACTTCATTCAAATTCACACTGTGTGGGCATTACCAGAACCTTGCAGTaGGCAGGCACAGCATTGGGA +
Preference number: 4 (lower is better)
Translates to: LQDSVPEELHSNSHCVGITRTLQ*AGTALG
Trigger: TCCCAATGCTGTGCCTGCGCACTGCAAGGTTCTGGT...AATGCCCACACAGTGTGAATTTGAATGAAGTTCCTCTGGCACAGAATCCTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR GCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTAGGTGGAGCTCCCATTaGCGCAGCAGCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFRWSSH*RSSSSR
Trigger: TCTGCTGCTGCTGCTGCGGCAATGGGAGCTCCACCT...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTCTGGAACAGAGTCCATaGCGGGGACATGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: SIRIKVILLPAILWRHTALEQSP*RGHAGC
Trigger: GCAACCTGCATGTCCCCGGCATGGACTCTGTTCCAG...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp ATAAATCTCAAAGTTGCACCGTTAGAGTTCTGCATTCATTTCAGATCACCTTACGGAGAAGGAGCGCTCTaGCCCAGGCTGGACTTCTGG +
Preference number: 4 (lower is better)
Translates to: INLKVAPLEFCIHFRSPYGEGAL*PRLDFW
Trigger: CCAGAAGTCCAGCCTGGGGCAGAGCGCTCCTTCTCC...GTAAGGTGATCTGAAATGAATGCAGAACTCTAACGGTGCAACTTTGAGATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp GTGTGTAGTGTAGGTGGACGATGCTTCTATGTGAGTGGATGTGTCACAAAATTTGCAGGGCCTTCTCTTTaGCGAAAGTGGAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: VCSVGGRCFYVSGCVTKFAGPSL*RKWRRS
Trigger: GCTCCTTCTCCACTTTCGGCAAAGAGAAGGCCCTGC...AAATTTTGTGACACATCCACTCACATAGAAGCATCGTCCACCTACACTACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp TTTAGGCAACCATATAAAGTTAAACAATCTATTGCTTACTGGTACACGCGACTGAGCGGGTGCCTGGCGTaGCGCTCTCTGAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: FRQPYKVKQSIAYWYTRLSGCLA*RSLRSP
Trigger: TGGAGATCTCAGAGAGCGCCACGCCAGGCACCCGCT...CAGTCGCGTGTACCAGTAAGCAATAGATTGTTTAACTTTATATGGTTGCCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTGTTGGTCCCCACGTCTaGGTCGAAGGCGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFVGPHV*VEGALQ
Trigger: TTGGAGAGCGCCTTCGACCCAGACGTGGGGACCAAC...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp AGGAGACTCCCAAGAAGAGAGCAGCATAATCCTGCCATATTTATCTCACAGTTTCTGTTCTCGGTCCAGTaGCTTCTCCAGGACCAGTTC +
Preference number: 4 (lower is better)
Translates to: RRLPRREQHNPAIFISQFLFSVQ*LLQDQF
Trigger: GAACTGGTCCTGGAGAAGCCACTGGACCGAGAACAG...AAACTGTGAGATAAATATGGCAGGATTATGCTGCTCTCTTCTTGGGAGTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp TCTATTGCTTACTGGTACACGCGACTGAAAACAGTGATAAACAAACCAAAATGGGGATCGACTTACTGGTaGAGAGTGCAGGCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: SIAYWYTRLKTVINKPKWGSTYW*RVQARP
Trigger: GGGGCGAGCCTGCACTCTCCACCAGTAAGTCGATCC...CCATTTTGGTTTGTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACAAAGACACTCATTCCTTaGATCTGGCACTCTAGGATA +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTKTLIP*IWHSRI
Trigger: TATCCTAGAGTGCCAGATCCAAGGAATGAGTGTCTT...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp CTGAACATCTCCCAGTGGAAGAGAACCCTTTGTTTGTGGTTGAGATCTGGAAAGCTGAGCTCTGCTCGCTaGTGTTTATTCTCGTTGGAC +
Preference number: 4 (lower is better)
Translates to: LNISQWKRTLCLWLRSGKLSSAR*CLFSLD
Trigger: GTCCAACGAGAATAAACACCAGCGAGCAGAGCTCAG...CTTTCCAGATCTCAACCACAAACAAAGGGTTCTCTTCCACTGGGAGATGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp ATGCCACAACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGAAAGACCTCGGTGTCTaGAACAGAGTCCATGCCGGG +
Preference number: 4 (lower is better)
Translates to: MPQLLLISVLRQSSRLGLKDLGV*NRVHAG
Trigger: CCCGGCATGGACTCTGTTCCAGACACCGAGGTCTTT...CAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGTTGTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp TTTAGAATGTTGTATTTTGGGGGTAGAGAGATGGCTCAGCGATTCAGAACACTGTCTCTTTGCCGAAAGTaGAGAAGGAGCGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: FRMLYFGGREMAQRFRTLSLCRK*RRSALP
Trigger: GGGCAGAGCGCTCCTTCTCCACTTTCGGCAAAGAGA...CAGTGTTCTGAATCGCTGAGCCATCTCTCTACCCCCAAAATACAACATTCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp AAAGTTAAACAATCTATTGCTTACTGGTACACGCGACTGAAAACAGTGATAAACCGAGCACTCGGATGGTaGGCAAGGCCGTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: KVKQSIAYWYTRLKTVINRALGW*ARPCQY
Trigger: GTACTGGCACGGCCTTGCTCACCATCCGAGTGCTCG...GTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGATTGTTTAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR TCA 90 bp AGAACCCTTTGTTTGTGGTTGAGATCTGGAAAGGTTCACTGTTGCCATGTGACTGCTTGGACATACACCTaGTACACTGGGCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RTLCLWLRSGKVHCCHVTAWTYT*YTGLSS
Trigger: TGAAGAGAGCCCAGTGTATCAGGTGTATGTCCAAGC...AGTCACATGGCAACAGTGAACCTTTCCAGATCTCAACCACAAACAAAGGGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp ACACTTTGCAACACGGTGTATAAACTACAGAATGTCTTTGATATTTTGTGGGTCGCACTATGCTGTAGGTaGGCCTGGCGTTCTCGCCGT +
Preference number: 4 (lower is better)
Translates to: TLCNTVYKLQNVFDILWVALCCR*AWRSRR
Trigger: ACGGCGAGAACGCCAGGCTCACCTACAGCATAGTGC...GACCCACAAAATATCAAAGACATTCTGTAGTTTATACACCGTGTTGCAAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp AAACAATCTATTGCTTACTGGTACACGCGACTGAAAACAGTGATAAACAAACCAGCACTATGCTGTAGGTaGGCCTGGCGTTCTCGCCGT +
Preference number: 4 (lower is better)
Translates to: KQSIAYWYTRLKTVINKPALCCR*AWRSRR
Trigger: ACGGCGAGAACGCCAGGCTCACCTACAGCATAGTGC...TGGTTTGTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR TCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTAAGTGTGAGGTCCAGTaGAGTTTCCCCGCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFKCEVQ*SFPAAR
Trigger: TCTGGCGGCGGGGAAACTTCACTGGACCTCACACTT...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp TCTATTGCTTACTGGTACACGCGACTGAAAACAGTGATAAACAAACCAAAATGGAAGTGTGAGGTCCAGTaGAGTTTCCCCGCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: SIAYWYTRLKTVINKPKWKCEVQ*SFPAAR
Trigger: TCTGGCGGCGGGGAAACTTCACTGGACCTCACACTT...CCATTTTGGTTTGTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR TCA 90 bp ATGCCACAACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTGCTTCCGTTGGAAATaGTGTCTGGTTGCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: MPQLLLISVLRQSSRLGLCFRWK*CLVAGR
Trigger: GCGACCAGCAACCAGACATCATTTCCAACGGAAGCA...CAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGTTGTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp CTGTTAGTGGCTGCAAATGAGAGAGGAGCTGATCAAATGTATTCCTCTGTCAAAACTGGCCACGGTTGGTaGCATCATGATCACTGTCTC +
Preference number: 4 (lower is better)
Translates to: LLVAANERGADQMYSSVKTGHGW*HHDHCL
Trigger: GAGACAGTGATCATGATGTCACCAACCGTGGCCAGT...TTTGACAGAGGAATACATTTGATCAGCTCCTCTCTCATTTGCAGCCACTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAAAGCTCACACTGCACCTaGCCGTTCTCCTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKSSHCT*PFSSES
Trigger: GGACTCAGAGGAGAACGGGCAGGTGCAGTGTGAGCT...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp CAAACACAACTTTGTAGATTCTATCTGGTGAAACAGGCCTGTCATTTCAGTATGAGCTCACACTGCACCTaGCCGTTCTCCTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: QTQLCRFYLVKQACHFSMSSHCT*PFSSES
Trigger: GGACTCAGAGGAGAACGGGCAGGTGCAGTGTGAGCT...CATACTGAAATGACAGGCCTGTTTCACCAGATAGAATCTACAAAGTTGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTGTTGCTGCGGTAATCTaGAGCCTGGCGTCCATCCGA +
Preference number: 4 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFVAAVI*SLASIR
Trigger: TCGGATGGACGCCAGGCTGCAGATTACCGCAGCAAC...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp AATGCTGCATTTGACACAGAAACTGTCAAGATTACAGTCAGCATAATCCCTTCACTGGAACAGAGTCCATaGCGGGGACATGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: NAAFDTETVKITVSIIPSLEQSP*RGHAGC
Trigger: GCAACCTGCATGTCCCCGGCATGGACTCTGTTCCAG...TGAAGGGATTATGCTGACTGTAATCTTGACAGTTTCTGTGTCAAATGCAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp ACACTTTGCAACACGGTGTATAAACTACAGAATGTCTTTGATATTTTGTGGGTCCTCTCCAGGGTGCCATaGAGGGCCTTCTCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: TLCNTVYKLQNVFDILWVLSRVP*RAFSLP
Trigger: CGGCAAAGAGAAGGCCCTGCATGGCACCCTGGAGAG...GACCCACAAAATATCAAAGACATTCTGTAGTTTATACACCGTGTTGCAAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp CAAACACAACTTTGTAGATTCTATCTGGTGAAACAGGCCTGTCATTTCAGTATGCCTTCCTCTCCAGGGTaGCATGCAGGGCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: QTQLCRFYLVKQACHFSMPSSPG*HAGPSL
Trigger: AAGAGAAGGCCCTGCATGGCACCCTGGAGAGGAAGG...CATACTGAAATGACAGGCCTGTTTCACCAGATAGAATCTACAAAGTTGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp CAAACACAACTTTGTAGATTCTATCTGGTGAAACAGGCCTGTCATTTCAGTATGAAGGGGTCCGTGAGTTaGCCACCGTCTGAAACCTGC +
Preference number: 4 (lower is better)
Translates to: QTQLCRFYLVKQACHFSMKGSVS*PPSETC
Trigger: GCAGGTTTCAGACGGTGGCCAACTCACGGACCCCTT...CATACTGAAATGACAGGCCTGTTTCACCAGATAGAATCTACAAAGTTGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp AGACTGTTAGGAACGACAGTCTCTGCAGTTAAAGATTCTTCAACATCTGTTAGAAGTCTCGCAAGGAGTTaGTCCCCACGTCTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: RLLGTTVSAVKDSSTSVRSLARS*SPRLGR
Trigger: TCGACCCAGACGTGGGGACCAACTCCTTGCGAGACT...TCTAACAGATGTTGAAGAATCTTTAACTGCAGAGACTGTCGTTCCTAACAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAAAGTCTCGCAAGGAGTTaGTCCCCACGTCTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKSLARS*SPRLGR
Trigger: TCGACCCAGACGTGGGGACCAACTCCTTGCGAGACT...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTCTGTTCTCGGTCCAGTaGCTTCTCCAGGACCAGTTC +
Preference number: 4 (lower is better)
Translates to: SIRIKVILLPAILWRHTALFSVQ*LLQDQF
Trigger: GAACTGGTCCTGGAGAAGCCACTGGACCGAGAACAG...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp ACATGGATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATACGGGCACATTGTCGTTaGAGTCGAGCACTCGGATGG +
Preference number: 4 (lower is better)
Translates to: TWMLNNALLNDNLVKENIRAHCR*SRALGW
Trigger: CCATCCGAGTGCTCGACTCCAACGACAATGTGCCCG...TATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCATCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp CAAACACAACTTTGTAGATTCTATCTGGTGAAACAGGCCTGTCATTTCAGTATGCGGGCACATTGTCGTTaGAGTCGAGCACTCGGATGG +
Preference number: 4 (lower is better)
Translates to: QTQLCRFYLVKQACHFSMRAHCR*SRALGW
Trigger: CCATCCGAGTGCTCGACTCCAACGACAATGTGCCCG...CATACTGAAATGACAGGCCTGTTTCACCAGATAGAATCTACAAAGTTGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp CTGTTAGTGGCTGCAAATGAGAGAGGAGCTGATCAAATGTATTCCTCTGTCAAAGCTGAAGCTGATCTCTaGTGCGTTGTCGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: LLVAANERGADQMYSSVKAEADL*CVVVGI
Trigger: GATGCCAACGACAACGCACCAGAGATCAGCTTCAGC...TTTGACAGAGGAATACATTTGATCAGCTCCTCTCTCATTTGCAGCCACTAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAACCTGGATCGACTTACTaGTGGAGAGTGCAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKPGSTY*WRVQAR
Trigger: GCGAGCCTGCACTCTCCACCAGTAAGTCGATCCAGG...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp AGTGGGGCAGAAGAAGATGGGTGGGAACACCATCATAGAGACAAAGAGGAGGGAACTATGTCAGCTTCCTaGAATGCAGAACTGTTAACT +
Preference number: 4 (lower is better)
Translates to: SGAEEDGWEHHHRDKEEGTMSAS*NAELLT
Trigger: AGTTAACAGTTCTGCATTCCAGGAAGCTGACATAGT...TCCCTCCTCTTTGTCTCTATGATGGTGTTCCCACCCATCTTCTTCTGCCCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACAACTATGTCAGCTTCCTaGAATGCAGAACTGTTAACT +
Preference number: 4 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTTMSAS*NAELLT
Trigger: AGTTAACAGTTCTGCATTCCAGGAAGCTGACATAGT...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp ATGCCACAACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGCAGCATCGGTCAGAGTaGCCCAGTGCTTTACATTCC +
Preference number: 4 (lower is better)
Translates to: MPQLLLISVLRQSSRLGLQHRSE*PSALHS
Trigger: GGAATGTAAAGCACTGGGCCACTCTGACCGATGCTG...CAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGTTGTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTCCCAGGCTGGACTTCTaGAGGTTCAAAGACCTCGGT +
Preference number: 4 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSPRLDF*RFKDLG
Trigger: ACCGAGGTCTTTGAACCTCCAGAAGTCCAGCCTGGG...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp AGGAGACTCCCAAGAAGAGAGCAGCATAATCCTGCCATATTTATCTCACAGTTTGTGAAATGTGACTACTaGACGAGTACACGACCTCGC +
Preference number: 4 (lower is better)
Translates to: RRLPRREQHNPAIFISQFVKCDY*TSTRPR
Trigger: GCGAGGTCGTGTACTCGTTCAGTAGTCACATTTCAC...AAACTGTGAGATAAATATGGCAGGATTATGCTGCTCTCTTCTTGGGAGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp CTGTTAGTGGCTGCAAATGAGAGAGGAGCTGATCAAATGTATTCCTCTGTCAAAGTGAAATGTGACTACTaGACGAGTACACGACCTCGC +
Preference number: 4 (lower is better)
Translates to: LLVAANERGADQMYSSVKVKCDY*TSTRPR
Trigger: GCGAGGTCGTGTACTCGTTCAGTAGTCACATTTCAC...TTTGACAGAGGAATACATTTGATCAGCTCCTCTCTCATTTGCAGCCACTAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp TTTAAGTCTCACATTTGTGGACTGTCTCCCACAAGCCTTCCTGTGAAACACTTTGCTTGGACATACACCTaGTACACTGGGCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: FKSHICGLSPTSLPVKHFAWTYT*YTGLSS
Trigger: TGAAGAGAGCCCAGTGTATCAGGTGTATGTCCAAGC...AAAGTGTTTCACAGGAAGGCTTGTGGGAGACAGTCCACAAATGTGAGACTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp TTCAATTCCCAGAATCCACATGGTGCTCACAACATGTATAATTGGATCCAGTGCTCCCGGGCTTCTACTTaGAAGCTGAAGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: FNSQNPHGAHNMYNWIQCSRAST*KLKSLI
Trigger: GATCAAGGACTTCAGCTTTCAAGTAGAAGCCCGGGA...GCACTGGATCCAATTATACATGTTGTGAGCACCATGTGGATTCTGGGAATTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp GTGTGTAGTGTAGGTGGACGATGCTTCTATGTGAGTGGATGTGTCACAAAATTTTCCCGGGCTTCTACTTaGAAGCTGAAGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: VCSVGGRCFYVSGCVTKFSRAST*KLKSLI
Trigger: GATCAAGGACTTCAGCTTTCAAGTAGAAGCCCGGGA...AAATTTTGTGACACATCCACTCACATAGAAGCATCGTCCACCTACACTACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp TTTAAGTCTCACATTTGTGGACTGTCTCCCACAAGCCTTCCTGTGAAACACTTTTGTCAACTAGATAGCTaGGCTCTGCTCGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: FKSHICGLSPTSLPVKHFCQLDS*ALLAGV
Trigger: AACACCAGCGAGCAGAGCTCAGCTATCTAGTTGACA...AAAGTGTTTCACAGGAAGGCTTGTGGGAGACAGTCCACAAATGTGAGACTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp GTGTGTAGTGTAGGTGGACGATGCTTCTATGTGAGTGGATGTGTCACAAAATTTCGGTTGGTGACATCATaGTCACTGTCTCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: VCSVGGRCFYVSGCVTKFRLVTS*SLSPCS
Trigger: TGAACAGGGAGACAGTGATCATGATGTCACCAACCG...AAATTTTGTGACACATCCACTCACATAGAAGCATCGTCCACCTACACTACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp CTGTTAGTGGCTGCAAATGAGAGAGGAGCTGATCAAATGTATTCCTCTGTCAAAACACAAGAGGGGCTCTaGTTACAGATTTGCTCGCGA +
Preference number: 4 (lower is better)
Translates to: LLVAANERGADQMYSSVKTQEGL*LQICSR
Trigger: TCGCGAGCAAATCTGTAAGCAGAGCCCCTCTTGTGT...TTTGACAGAGGAATACATTTGATCAGCTCCTCTCTCATTTGCAGCCACTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp AGACTGTTAGGAACGACAGTCTCTGCAGTTAAAGATTCTTCAACATCTGTTAGAAGAAAGACCTCCAGGTaGAGGACACAAGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RLLGTTVSAVKDSSTSVRRKTSR*RTQEGL
Trigger: GAGCCCCTCTTGTGTCCTGCACCTGGAGGTCTTTCT...TCTAACAGATGTTGAAGAATCTTTAACTGCAGAGACTGTCGTTCCTAACAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp AGACTGTTAGGAACGACAGTCTCTGCAGTTAAAGATTCTTCAACATCTGTTAGAGTTCGGCGAATCGGTTaGCATCTCCCTGGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: RLLGTTVSAVKDSSTSVRVRRIG*HLPGSV
Trigger: TACAGACCCAGGGAGATGGCAACCGATTCGCCGAAC...TCTAACAGATGTTGAAGAATCTTTAACTGCAGAGACTGTCGTTCCTAACAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTACCAGAACCTTGCAGTaGGCAGGCACAGCATTGGGA +
Preference number: 4 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFTRTLQ*AGTALG
Trigger: TCCCAATGCTGTGCCTGCGCACTGCAAGGTTCTGGT...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp AATGCTGCATTTGACACAGAAACTGTCAAGATTACAGTCAGCATAATCCCTTCACTCTCACCAGAACCTTaGAGTGCGCAGGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: NAAFDTETVKITVSIIPSLSPEP*SAQAQH
Trigger: ATGCTGTGCCTGCGCACTGCAAGGTTCTGGTGAGAG...TGAAGGGATTATGCTGACTGTAATCTTGACAGTTTCTGTGTCAAATGCAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp ATCTATTGTATTAGCTATCTAGGGTTGCTAAAGGAGACTCCCAAGAAGAGAGCAGAAGCTGATCTCTGGTaGGTTGTCGTTGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: IYCISYLGLLKETPKKRAEADLW*VVVGIQ
Trigger: CTGGATGCCAACGACAACGCACCAGAGATCAGCTTC...TGCTCTCTTCTTGGGAGTCTCCTTTAGCAACCCTAGATAGCTAATACAATAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp AAACAATCTATTGCTTACTGGTACACGCGACTGAAAACAGTGATAAACAAACCAAGCTCACACTGCACCTaGCCGTTCTCCTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: KQSIAYWYTRLKTVINKPSSHCT*PFSSES
Trigger: GGACTCAGAGGAGAACGGGCAGGTGCAGTGTGAGCT...TGGTTTGTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR GCA 90 bp TTTAGAATGTTGTATTTTGGGGGTAGAGAGATGGCTCAGCGATTCAGAACACTGAGAGGTTCATTTCGTTaGCCCGCACTATGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: FRMLYFGGREMAQRFRTLRGSFR*PALCCR
Trigger: CCTACAGCATAGTGCGGGGCAACGAAATGAACCTCT...CAGTGTTCTGAATCGCTGAGCCATCTCTCTACCCCCAAAATACAACATTCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp TTTAAGTCTCACATTTGTGGACTGTCTCCCACAAGCCTTCCTGTGAAACACTTTAGAGGTTCATTTCGTTaGCCCGCACTATGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: FKSHICGLSPTSLPVKHFRGSFR*PALCCR
Trigger: CCTACAGCATAGTGCGGGGCAACGAAATGAACCTCT...AAAGTGTTTCACAGGAAGGCTTGTGGGAGACAGTCCACAAATGTGAGACTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp ATAAATCTCAAAGTTGCACCGTTAGAGTTCTGCATTCATTTCAGATCACCTTACGTTGCTGCGGTAATCTaGAGCCTGGCGTCCATCCGA +
Preference number: 4 (lower is better)
Translates to: INLKVAPLEFCIHFRSPYVAAVI*SLASIR
Trigger: TCGGATGGACGCCAGGCTGCAGATTACCGCAGCAAC...GTAAGGTGATCTGAAATGAATGCAGAACTCTAACGGTGCAACTTTGAGATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAAGCAGGGCCTTCTCTTTaGCGAAAGTGGAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKAGPSL*RKWRRS
Trigger: GCTCCTTCTCCACTTTCGGCAAAGAGAAGGCCCTGC...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp ACACTTTGCAACACGGTGTATAAACTACAGAATGTCTTTGATATTTTGTGGGTCCCTTCCTCTCCAGGGTaGCATGCAGGGCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TLCNTVYKLQNVFDILWVPSSPG*HAGPSL
Trigger: AAGAGAAGGCCCTGCATGGCACCCTGGAGAGGAAGG...GACCCACAAAATATCAAAGACATTCTGTAGTTTATACACCGTGTTGCAAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp ACACTTTGCAACACGGTGTATAAACTACAGAATGTCTTTGATATTTTGTGGGTCAAGGGGTCCGTGAGTTaGCCACCGTCTGAAACCTGC +
Preference number: 4 (lower is better)
Translates to: TLCNTVYKLQNVFDILWVKGSVS*PPSETC
Trigger: GCAGGTTTCAGACGGTGGCCAACTCACGGACCCCTT...GACCCACAAAATATCAAAGACATTCTGTAGTTTATACACCGTGTTGCAAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp ATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATAAAGAAAGTTGGTCCCCACGTCTaGGTCGAAGGCGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: MLNNALLNDNLVKENIKKVGPHV*VEGALQ
Trigger: TTGGAGAGCGCCTTCGACCCAGACGTGGGGACCAAC...TTTCTTTATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp TTTCTCATATATTCCCCAGATTTCAAAGAAGGCAGGACCATAAATGTAGAAGAGAGTCTCGCAAGGAGTTaGTCCCCACGTCTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: FLIYSPDFKEGRTINVEESLARS*SPRLGR
Trigger: TCGACCCAGACGTGGGGACCAACTCCTTGCGAGACT...CTCTTCTACATTTATGGTCCTGCCTTCTTTGAAATCTGGGGAATATATGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp GAGATCTGGAAAGGTTCACTGTTGCCATGTGACTTTTCTATTCCCCTCTGGCATCGAGAAGTAGCTATTTaGGGTTATCTCGTAGTCTCG +
Preference number: 4 (lower is better)
Translates to: EIWKGSLLPCDFSIPLWHREVAI*GYLVVS
Trigger: CGAGACTACGAGATAACCCCAAATAGCTACTTCTCG...ATGCCAGAGGGGAATAGAAAAGTCACATGGCAACAGTGAACCTTTCCAGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp CAAACACAACTTTGTAGATTCTATCTGGTGAAACAGGCCTGTCATTTCAGTATGCTGTTCTCGGTCCAGTaGCTTCTCCAGGACCAGTTC +
Preference number: 4 (lower is better)
Translates to: QTQLCRFYLVKQACHFSMLFSVQ*LLQDQF
Trigger: GAACTGGTCCTGGAGAAGCCACTGGACCGAGAACAG...CATACTGAAATGACAGGCCTGTTTCACCAGATAGAATCTACAAAGTTGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp ACACTTTGCAACACGGTGTATAAACTACAGAATGTCTTTGATATTTTGTGGGTCCGGGCACATTGTCGTTaGAGTCGAGCACTCGGATGG +
Preference number: 4 (lower is better)
Translates to: TLCNTVYKLQNVFDILWVRAHCR*SRALGW
Trigger: CCATCCGAGTGCTCGACTCCAACGACAATGTGCCCG...GACCCACAAAATATCAAAGACATTCTGTAGTTTATACACCGTGTTGCAAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp ATCTATTGTATTAGCTATCTAGGGTTGCTAAAGGAGACTCCCAAGAAGAGAGCAGCTGAAGCTGATCTCTaGTGCGTTGTCGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: IYCISYLGLLKETPKKRAAEADL*CVVVGI
Trigger: GATGCCAACGACAACGCACCAGAGATCAGCTTCAGC...TGCTCTCTTCTTGGGAGTCTCCTTTAGCAACCCTAGATAGCTAATACAATAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTGCTGAAGCTGATCTCTaGTGCGTTGTCGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: SIRIKVILLPAILWRHTAAEADL*CVVVGI
Trigger: GATGCCAACGACAACGCACCAGAGATCAGCTTCAGC...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp GTTTACTCTTACAGGATTCTGTGCCAGAGGAACTTCATTCAAATTCACACTGTGGCTGAAGCTGATCTCTaGTGCGTTGTCGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: VYSYRILCQRNFIQIHTVAEADL*CVVVGI
Trigger: GATGCCAACGACAACGCACCAGAGATCAGCTTCAGC...CACAGTGTGAATTTGAATGAAGTTCCTCTGGCACAGAATCCTGTAAGAGTAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp TTTAGGCAACCATATAAAGTTAAACAATCTATTGCTTACTGGTACACGCGACTGCCTGGATCGACTTACTaGTGGAGAGTGCAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: FRQPYKVKQSIAYWYTRLPGSTY*WRVQAR
Trigger: GCGAGCCTGCACTCTCCACCAGTAAGTCGATCCAGG...CAGTCGCGTGTACCAGTAAGCAATAGATTGTTTAACTTTATATGGTTGCCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp AAAGTTAAACAATCTATTGCTTACTGGTACACGCGACTGAAAACAGTGATAAACCTTCGTCGCGGTCCGTaGCGCTCACCGCGTAAATGT +
Preference number: 4 (lower is better)
Translates to: KVKQSIAYWYTRLKTVINLRRGP*RSPRKC
Trigger: ACATTTACGCGGTGAGCGCCACGGACCGCGACGAAG...GTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGATTGTTTAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp GAGATCTGGAAAGGTTCACTGTTGCCATGTGACTTTTCTATTCCCCTCTGGCATATTCCTCGGTGCAGTTaGAGAAAAGATCCATACCAG +
Preference number: 4 (lower is better)
Translates to: EIWKGSLLPCDFSIPLWHIPRCS*RKDPYQ
Trigger: CTGGTATGGATCTTTTCTCCAACTGCACCGAGGAAT...ATGCCAGAGGGGAATAGAAAAGTCACATGGCAACAGTGAACCTTTCCAGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTCAGCATCGGTCAGAGTaGCCCAGTGCTTTACATTCC +
Preference number: 4 (lower is better)
Translates to: SIRIKVILLPAILWRHTAQHRSE*PSALHS
Trigger: GGAATGTAAAGCACTGGGCCACTCTGACCGATGCTG...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp ACATGGATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATACCCAGGCTGGACTTCTaGAGGTTCAAAGACCTCGGT +
Preference number: 4 (lower is better)
Translates to: TWMLNNALLNDNLVKENIPRLDF*RFKDLG
Trigger: ACCGAGGTCTTTGAACCTCCAGAAGTCCAGCCTGGG...TATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCATCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CAA 72 bp AACATCTCCCAGTGGAAGAGAACCCTTTGTTTGTGGTaGAGATCTGGAAAGGTTCACTGTTGCCATGTGACT +
Preference number: 4 (lower is better)
Translates to: NISQWKRTLCLW*RSGKVHCCHVT
Trigger: AGTCACATGGCAACAGTGAACCTTTCCAGATCTCAACCACAAACAAAGGGTTCTCTTCCACTGGGAGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTCAAGTAGCCGTTGTCTaGGTTGATGGACACGTAGGT +
Preference number: 4 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSQVAVV*VDGHVG
Trigger: ACCTACGTGTCCATCAACTCAGACAACGGCTACTTG...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp GTTTACTCTTACAGGATTCTGTGCCAGAGGAACTTCATTCAAATTCACACTGTGCAAGTAGCCGTTGTCTaGGTTGATGGACACGTAGGT +
Preference number: 4 (lower is better)
Translates to: VYSYRILCQRNFIQIHTVQVAVV*VDGHVG
Trigger: ACCTACGTGTCCATCAACTCAGACAACGGCTACTTG...CACAGTGTGAATTTGAATGAAGTTCCTCTGGCACAGAATCCTGTAAGAGTAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR TCA 90 bp AGACTGTTAGGAACGACAGTCTCTGCAGTTAAAGATTCTTCAACATCTGTTAGATGCTTCCGTTGGAAATaGTGTCTGGTTGCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: RLLGTTVSAVKDSSTSVRCFRWK*CLVAGR
Trigger: GCGACCAGCAACCAGACATCATTTCCAACGGAAGCA...TCTAACAGATGTTGAAGAATCTTTAACTGCAGAGACTGTCGTTCCTAACAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTTGCTTCCGTTGGAAATaGTGTCTGGTTGCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFCFRWK*CLVAGR
Trigger: GCGACCAGCAACCAGACATCATTTCCAACGGAAGCA...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTTGTCAACTAGATAGCTaGGCTCTGCTCGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SIRIKVILLPAILWRHTACQLDS*ALLAGV
Trigger: AACACCAGCGAGCAGAGCTCAGCTATCTAGTTGACA...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAAACTGGCCACGGTTGGTaGCATCATGATCACTGTCTC +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKTGHGW*HHDHCL
Trigger: GAGACAGTGATCATGATGTCACCAACCGTGGCCAGT...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTACACAAGAGGGGCTCTaGTTACAGATTTGCTCGCGA +
Preference number: 4 (lower is better)
Translates to: SIRIKVILLPAILWRHTATQEGL*LQICSR
Trigger: TCGCGAGCAAATCTGTAAGCAGAGCCCCTCTTGTGT...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp ATAAATCTCAAAGTTGCACCGTTAGAGTTCTGCATTCATTTCAGATCACCTTACACCAGAACCTTGCAGTaGGCAGGCACAGCATTGGGA +
Preference number: 4 (lower is better)
Translates to: INLKVAPLEFCIHFRSPYTRTLQ*AGTALG
Trigger: TCCCAATGCTGTGCCTGCGCACTGCAAGGTTCTGGT...GTAAGGTGATCTGAAATGAATGCAGAACTCTAACGGTGCAACTTTGAGATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAAGAAGCTGATCTCTGGTaGGTTGTCGTTGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKEADLW*VVVGIQ
Trigger: CTGGATGCCAACGACAACGCACCAGAGATCAGCTTC...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp AATGCTGCATTTGACACAGAAACTGTCAAGATTACAGTCAGCATAATCCCTTCAGAAGCTGATCTCTGGTaGGTTGTCGTTGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: NAAFDTETVKITVSIIPSEADLW*VVVGIQ
Trigger: CTGGATGCCAACGACAACGCACCAGAGATCAGCTTC...TGAAGGGATTATGCTGACTGTAATCTTGACAGTTTCTGTGTCAAATGCAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR GCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTAGAGGTTCATTTCGTTaGCCCGCACTATGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SIRIKVILLPAILWRHTARGSFR*PALCCR
Trigger: CCTACAGCATAGTGCGGGGCAACGAAATGAACCTCT...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp ATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATAAAGAAACTGGAACAGAGTCCATaGCGGGGACATGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: MLNNALLNDNLVKENIKKLEQSP*RGHAGC
Trigger: GCAACCTGCATGTCCCCGGCATGGACTCTGTTCCAG...TTTCTTTATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp ATTAATGCCTGGGACAGATGCAAAGAGAAAAAGACCTTTGTCAGTGATTGGCCCCGAGAAGTAGCTATTTaGGGTTATCTCGTAGTCTCG +
Preference number: 4 (lower is better)
Translates to: INAWDRCKEKKTFVSDWPREVAI*GYLVVS
Trigger: CGAGACTACGAGATAACCCCAAATAGCTACTTCTCG...GGGCCAATCACTGACAAAGGTCTTTTTCTCTTTGCATCTGTCCCAGGCATTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp CATTCAAATTCACACTGTGTGGGCATTCGGCTTCAAGAGCTTGTGTTAAAGCTGATACACCTGATACACTaGGCTCTCTTCATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: HSNSHCVGIRLQELVLKLIHLIH*ALFIVQ
Trigger: CTGGACTATGAAGAGAGCCCAGTGTATCAGGTGTAT...CAGCTTTAACACAAGCTCTTGAAGCCGAATGCCCACACAGTGTGAATTTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp AACACTGGCTACTCTTCCAGAGGTCGTGAATTCAATTCCCAGAATCCACATGGTGGTGTTTATTCTCGTTaGACAAAATGCTTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: NTGYSSRGREFNSQNPHGGVYSR*TKCFRW
Trigger: CCAACGGAAGCATTTTGTCCAACGAGAATAAACACC...ACCATGTGGATTCTGGGAATTGAATTCACGACCTCTGGAAGAGTAGCCAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAATCCATACCAGCTGACTaGCCACGGTTGGTGACATCA +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKSIPAD*PRLVTS
Trigger: TGATGTCACCAACCGTGGCCAGTCAGCTGGTATGGA...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp AATGCTGCATTTGACACAGAAACTGTCAAGATTACAGTCAGCATAATCCCTTCATCCATACCAGCTGACTaGCCACGGTTGGTGACATCA +
Preference number: 4 (lower is better)
Translates to: NAAFDTETVKITVSIIPSSIPAD*PRLVTS
Trigger: TGATGTCACCAACCGTGGCCAGTCAGCTGGTATGGA...TGAAGGGATTATGCTGACTGTAATCTTGACAGTTTCTGTGTCAAATGCAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp ACATGGATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATACAGCATCGGTCAGAGTaGCCCAGTGCTTTACATTCC +
Preference number: 4 (lower is better)
Translates to: TWMLNNALLNDNLVKENIQHRSE*PSALHS
Trigger: GGAATGTAAAGCACTGGGCCACTCTGACCGATGCTG...TATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCATCCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp ATAAATCTCAAAGTTGCACCGTTAGAGTTCTGCATTCATTTCAGATCACCTTACTCTCTTTGCCGAAAGTaGAGAAGGAGCGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: INLKVAPLEFCIHFRSPYSLCRK*RRSALP
Trigger: GGGCAGAGCGCTCCTTCTCCACTTTCGGCAAAGAGA...GTAAGGTGATCTGAAATGAATGCAGAACTCTAACGGTGCAACTTTGAGATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR CAA 72 bp TTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTaGTACACTCTTTACAGACTAGCTTGGCCCAGACCT +
Preference number: 4 (lower is better)
Translates to: LISVLRQSSRLG*YTLYRLAWPRP
Trigger: AGGTCTGGGCCAAGCTAGTCTGTAAAGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAAGCTTGGACATACACCTaGTACACTGGGCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKAWTYT*YTGLSS
Trigger: TGAAGAGAGCCCAGTGTATCAGGTGTATGTCCAAGC...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp TTTAGAATGTTGTATTTTGGGGGTAGAGAGATGGCTCAGCGATTCAGAACACTGTTCACATCTGACACTTaGACCTGGATCGACTTACTG +
Preference number: 4 (lower is better)
Translates to: FRMLYFGGREMAQRFRTLFTSDT*TWIDLL
Trigger: CAGTAAGTCGATCCAGGTTCAAGTGTCAGATGTGAA...CAGTGTTCTGAATCGCTGAGCCATCTCTCTACCCCCAAAATACAACATTCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp TTACAGGATTCTGTGCCAGAGGAACTTCATTCAAATTCACACTGTGTGGGCATTTTCACATCTGACACTTaGACCTGGATCGACTTACTG +
Preference number: 4 (lower is better)
Translates to: LQDSVPEELHSNSHCVGIFTSDT*TWIDLL
Trigger: CAGTAAGTCGATCCAGGTTCAAGTGTCAGATGTGAA...AATGCCCACACAGTGTGAATTTGAATGAAGTTCCTCTGGCACAGAATCCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR TCA 90 bp ACATGGATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATACAAGTAGCCGTTGTCTaGGTTGATGGACACGTAGGT +
Preference number: 4 (lower is better)
Translates to: TWMLNNALLNDNLVKENIQVAVV*VDGHVG
Trigger: ACCTACGTGTCCATCAACTCAGACAACGGCTACTTG...TATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCATCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAACAAGTAGCCGTTGTCTaGGTTGATGGACACGTAGGT +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKQVAVV*VDGHVG
Trigger: ACCTACGTGTCCATCAACTCAGACAACGGCTACTTG...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTTCCCGGGCTTCTACTTaGAAGCTGAAGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFSRAST*KLKSLI
Trigger: GATCAAGGACTTCAGCTTTCAAGTAGAAGCCCGGGA...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp CAAACACAACTTTGTAGATTCTATCTGGTGAAACAGGCCTGTCATTTCAGTATGGGGGCGTTGTCGTTCTaGTCCACTATCAAGATGTTG +
Preference number: 4 (lower is better)
Translates to: QTQLCRFYLVKQACHFSMGALSF*STIKML
Trigger: CAACATCTTGATAGTGGATCAGAACGACAACGCCCC...CATACTGAAATGACAGGCCTGTTTCACCAGATAGAATCTACAAAGTTGTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp CTGAACATCTCCCAGTGGAAGAGAACCCTTTGTTTGTGGTTGAGATCTGGAAAGCACCAACATGATATCTaGCTTGCTGAGTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LNISQWKRTLCLWLRSGKHQHDI*LAEFLL
Trigger: AAGAAGAAACTCAGCAAGTCAGATATCATGTTGGTG...CTTTCCAGATCTCAACCACAAACAAAGGGTTCTCTTCCACTGGGAGATGTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp ACATGGATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATACGGTTGGTGACATCATaGTCACTGTCTCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: TWMLNNALLNDNLVKENIRLVTS*SLSPCS
Trigger: TGAACAGGGAGACAGTGATCATGATGTCACCAACCG...TATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCATCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTCGGTTGGTGACATCATaGTCACTGTCTCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFRLVTS*SLSPCS
Trigger: TGAACAGGGAGACAGTGATCATGATGTCACCAACCG...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp TTTCTCATATATTCCCCAGATTTCAAAGAAGGCAGGACCATAAATGTAGAAGAGGAAGCTGATCTCTGGTaGGTTGTCGTTGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: FLIYSPDFKEGRTINVEEEADLW*VVVGIQ
Trigger: CTGGATGCCAACGACAACGCACCAGAGATCAGCTTC...CTCTTCTACATTTATGGTCCTGCCTTCTTTGAAATCTGGGGAATATATGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CCA 90 bp ATGCCACAACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGCGAGAAGTAGCTATTTaGGGTTATCTCGTAGTCTCG +
Preference number: 4 (lower is better)
Translates to: MPQLLLISVLRQSSRLGLREVAI*GYLVVS
Trigger: CGAGACTACGAGATAACCCCAAATAGCTACTTCTCG...CAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGTTGTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTCTGAGCTCTGCTCGCTaGTGTTTATTCTCGTTGGAC +
Preference number: 4 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFLSSAR*CLFSLD
Trigger: GTCCAACGAGAATAAACACCAGCGAGCAGAGCTCAG...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp CAAACACAACTTTGTAGATTCTATCTGGTGAAACAGGCCTGTCATTTCAGTATGCTGAGCTCTGCTCGCTaGTGTTTATTCTCGTTGGAC +
Preference number: 4 (lower is better)
Translates to: QTQLCRFYLVKQACHFSMLSSAR*CLFSLD
Trigger: GTCCAACGAGAATAAACACCAGCGAGCAGAGCTCAG...CATACTGAAATGACAGGCCTGTTTCACCAGATAGAATCTACAAAGTTGTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp TTTAAGTCTCACATTTGTGGACTGTCTCCCACAAGCCTTCCTGTGAAACACTTTATTCCTCGGTGCAGTTaGAGAAAAGATCCATACCAG +
Preference number: 4 (lower is better)
Translates to: FKSHICGLSPTSLPVKHFIPRCS*RKDPYQ
Trigger: CTGGTATGGATCTTTTCTCCAACTGCACCGAGGAAT...AAAGTGTTTCACAGGAAGGCTTGTGGGAGACAGTCCACAAATGTGAGACTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR CAA 72 bp GCTCACAACATGTATAATTGGATCCAGTGCCCTCTCTaGGTGTGTCAGAAACAGCGTGCTCATTATACAAAA +
Preference number: 4 (lower is better)
Translates to: AHNMYNWIQCPL*VCQKQRAHYTK
Trigger: TTTTGTATAATGAGCACGCTGTTTCTGACACACCAAGAGAGGGCACTGGATCCAATTATACATGTTGTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CAA 72 bp CTGAGCTCTATGCCACAACTCCTTTTAATTTCTGTTTaGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTT +
Preference number: 4 (lower is better)
Translates to: LSSMPQLLLISV*RQSSRLGLYTL
Trigger: AAGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGTTGTGGCATAGAGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp CTGTTAGTGGCTGCAAATGAGAGAGGAGCTGATCAAATGTATTCCTCTGTCAAACTGAAACCTGCGAGCTaGAAGTTTTGTAATGTCCAA +
Preference number: 4 (lower is better)
Translates to: LLVAANERGADQMYSSVKLKPAS*KFCNVQ
Trigger: TTGGACATTACAAAACTTTCAGCTCGCAGGTTTCAG...TTTGACAGAGGAATACATTTGATCAGCTCCTCTCTCATTTGCAGCCACTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp TTTCTCATATATTCCCCAGATTTCAAAGAAGGCAGGACCATAAATGTAGAAGAGGTGAAATGTGACTACTaGACGAGTACACGACCTCGC +
Preference number: 4 (lower is better)
Translates to: FLIYSPDFKEGRTINVEEVKCDY*TSTRPR
Trigger: GCGAGGTCGTGTACTCGTTCAGTAGTCACATTTCAC...CTCTTCTACATTTATGGTCCTGCCTTCTTTGAAATCTGGGGAATATATGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR GCA 90 bp TTTAGAATGTTGTATTTTGGGGGTAGAGAGATGGCTCAGCGATTCAGAACACTGCTTTACATTCCTCGGTaGAGTTGGAGAAAAGATCCA +
Preference number: 4 (lower is better)
Translates to: FRMLYFGGREMAQRFRTLLYIPR*SWRKDP
Trigger: TGGATCTTTTCTCCAACTGCACCGAGGAATGTAAAG...CAGTGTTCTGAATCGCTGAGCCATCTCTCTACCCCCAAAATACAACATTCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTCGAGAAGTAGCTATTTaGGGTTATCTCGTAGTCTCG +
Preference number: 4 (lower is better)
Translates to: SIRIKVILLPAILWRHTAREVAI*GYLVVS
Trigger: CGAGACTACGAGATAACCCCAAATAGCTACTTCTCG...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp ATCTATTGTATTAGCTATCTAGGGTTGCTAAAGGAGACTCCCAAGAAGAGAGCAATACACCTGATACACTaGGCTCTCTTCATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: IYCISYLGLLKETPKKRAIHLIH*ALFIVQ
Trigger: CTGGACTATGAAGAGAGCCCAGTGTATCAGGTGTAT...TGCTCTCTTCTTGGGAGTCTCCTTTAGCAACCCTAGATAGCTAATACAATAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTATACACCTGATACACTaGGCTCTCTTCATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SIRIKVILLPAILWRHTAIHLIH*ALFIVQ
Trigger: CTGGACTATGAAGAGAGCCCAGTGTATCAGGTGTAT...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTATACACCTGATACACTaGGCTCTCTTCATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSIHLIH*ALFIVQ
Trigger: CTGGACTATGAAGAGAGCCCAGTGTATCAGGTGTAT...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp ATGCCACAACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGGGTGTTTATTCTCGTTaGACAAAATGCTTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: MPQLLLISVLRQSSRLGLGVYSR*TKCFRW
Trigger: CCAACGGAAGCATTTTGTCCAACGAGAATAAACACC...CAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGTTGTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp ACACTTTGCAACACGGTGTATAAACTACAGAATGTCTTTGATATTTTGTGGGTCCCGCGTCAAATATGGTaGTTTGTAAGGCGCTCGTGT +
Preference number: 4 (lower is better)
Translates to: TLCNTVYKLQNVFDILWVPRQIW*FVRRSC
Trigger: ACACGAGCGCCTTACAAACCACCATATTTGACGCGG...GACCCACAAAATATCAAAGACATTCTGTAGTTTATACACCGTGTTGCAAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CAA 72 bp GATGGCCAAGATAATGAAGTTGAAAAGTTGATGCTTTaGTTGGTCGACTCTGTGCAAATCATACTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: DGQDNEVEKLML*LVDSVQIILLR
Trigger: CCGAAGCAGTATGATTTGCACAGAGTCGACCAACAAAAGCATCAACTTTTCAACTTCATTATCTTGGCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CAA 72 bp AAAAGGACTGCTGTGGTGCCCAAGAGTTTCTGTGCTTaGGAAACACACATGATCAACTGGTTTCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: KRTAVVPKSFCA*ETHMINWFLFQ
Trigger: TTGAAAAAGAAACCAGTTGATCATGTGTGTTTCCAAAGCACAGAAACTCTTGGGCACCACAGCAGTCCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CAA 72 bp TTGAATGTGAAAATTACACTGCCTCTCCGTGATGTGTaGCTGAAGCTACCTGTAGTATTTCATCGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LNVKITLPLRDV*LKLPVVFHRSH
Trigger: ATGAGAGCGATGAAATACTACAGGTAGCTTCAGCAACACATCACGGAGAGGCAGTGTAATTTTCACATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CAA 72 bp CTACTGAACAGTTTCACAGATGACTGCATAAGGGTTTaGTCCAACTTCTCAGGGGGATATTTCTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: LLNSFTDDCIRV*SNFSGGYFLKY
Trigger: GTACTTCAAGAAATATCCCCCTGAGAAGTTGGACAAAACCCTTATGCAGTCATCTGTGAAACTGTTCAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CAA 72 bp ATGCACACTAAAAGTATTAGAATCAAAGTCATATTATaGCCTGCTATACTCTGGCGGCACACAGCTACCAGC +
Preference number: 4 (lower is better)
Translates to: MHTKSIRIKVIL*PAILWRHTATS
Trigger: GCTGGTAGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACTTTTAGTGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR TCA 90 bp AATGCTGCATTTGACACAGAAACTGTCAAGATTACAGTCAGCATAATCCCTTCATTCACATCTGACACTTaGACCTGGATCGACTTACTG +
Preference number: 4 (lower is better)
Translates to: NAAFDTETVKITVSIIPSFTSDT*TWIDLL
Trigger: CAGTAAGTCGATCCAGGTTCAAGTGTCAGATGTGAA...TGAAGGGATTATGCTGACTGTAATCTTGACAGTTTCTGTGTCAAATGCAGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp ATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATAAAGAAAGGGGCGTTGTCGTTCTaGTCCACTATCAAGATGTTG +
Preference number: 4 (lower is better)
Translates to: MLNNALLNDNLVKENIKKGALSF*STIKML
Trigger: CAACATCTTGATAGTGGATCAGAACGACAACGCCCC...TTTCTTTATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp GTGTGTAGTGTAGGTGGACGATGCTTCTATGTGAGTGGATGTGTCACAAAATTTCACCAACATGATATCTaGCTTGCTGAGTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VCSVGGRCFYVSGCVTKFHQHDI*LAEFLL
Trigger: AAGAAGAAACTCAGCAAGTCAGATATCATGTTGGTG...AAATTTTGTGACACATCCACTCACATAGAAGCATCGTCCACCTACACTACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR TCA 90 bp GTGTGTAGTGTAGGTGGACGATGCTTCTATGTGAGTGGATGTGTCACAAAATTTGAAAGAGGGTGGAAATaGTTCAAATATGGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: VCSVGGRCFYVSGCVTKFERGWK*FKYGGL
Trigger: CAAACCACCATATTTGAATCATTTCCACCCTCTTTC...AAATTTTGTGACACATCCACTCACATAGAAGCATCGTCCACCTACACTACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp ATCTATTGTATTAGCTATCTAGGGTTGCTAAAGGAGACTCCCAAGAAGAGAGCAAAGACACTCATTCCTTaGATCTGGCACTCTAGGATA +
Preference number: 4 (lower is better)
Translates to: IYCISYLGLLKETPKKRAKTLIP*IWHSRI
Trigger: TATCCTAGAGTGCCAGATCCAAGGAATGAGTGTCTT...TGCTCTCTTCTTGGGAGTCTCCTTTAGCAACCCTAGATAGCTAATACAATAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CCA 90 bp TTTAAGTCTCACATTTGTGGACTGTCTCCCACAAGCCTTCCTGTGAAACACTTTACTATGTCAGCTTCCTaGAATGCAGAACTGTTAACT +
Preference number: 4 (lower is better)
Translates to: FKSHICGLSPTSLPVKHFTMSAS*NAELLT
Trigger: AGTTAACAGTTCTGCATTCCAGGAAGCTGACATAGT...AAAGTGTTTCACAGGAAGGCTTGTGGGAGACAGTCCACAAATGTGAGACTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp ATGCCACAACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGATGATTCAAATATGGTaGTTTGTAAGGCGCTCGTGT +
Preference number: 4 (lower is better)
Translates to: MPQLLLISVLRQSSRLGLMIQIW*FVRRSC
Trigger: ACACGAGCGCCTTACAAACCACCATATTTGAATCAT...CAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGTTGTGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp TTTAGGCAACCATATAAAGTTAAACAATCTATTGCTTACTGGTACACGCGACTGTCAGCCTTACCTCGTTaGACAAAATGCTTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: FRQPYKVKQSIAYWYTRLSALPR*TKCFRW
Trigger: CCAACGGAAGCATTTTGTCCAACGAGGTAAGGCTGA...CAGTCGCGTGTACCAGTAAGCAATAGATTGTTTAACTTTATATGGTTGCCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR TCA 90 bp AGACTGTTAGGAACGACAGTCTCTGCAGTTAAAGATTCTTCAACATCTGTTAGACTGAAACCTGCGAGCTaGAAGTTTTGTAATGTCCAA +
Preference number: 4 (lower is better)
Translates to: RLLGTTVSAVKDSSTSVRLKPAS*KFCNVQ
Trigger: TTGGACATTACAAAACTTTCAGCTCGCAGGTTTCAG...TCTAACAGATGTTGAAGAATCTTTAACTGCAGAGACTGTCGTTCCTAACAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAACTGAAACCTGCGAGCTaGAAGTTTTGTAATGTCCAA +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKLKPAS*KFCNVQ
Trigger: TTGGACATTACAAAACTTTCAGCTCGCAGGTTTCAG...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp CAAACACAACTTTGTAGATTCTATCTGGTGAAACAGGCCTGTCATTTCAGTATGAAGACACTCATTCCTTaGATCTGGCACTCTAGGATA +
Preference number: 4 (lower is better)
Translates to: QTQLCRFYLVKQACHFSMKTLIP*IWHSRI
Trigger: TATCCTAGAGTGCCAGATCCAAGGAATGAGTGTCTT...CATACTGAAATGACAGGCCTGTTTCACCAGATAGAATCTACAAAGTTGTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTGGTGTTTATTCTCGTTaGACAAAATGCTTCCGTTGG +
Preference number: 4 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFGVYSR*TKCFRW
Trigger: CCAACGGAAGCATTTTGTCCAACGAGAATAAACACC...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CCA 90 bp ACACTTTGCAACACGGTGTATAAACTACAGAATGTCTTTGATATTTTGTGGGTCATTCCTCGGTGCAGTTaGAGAAAAGATCCATACCAG +
Preference number: 4 (lower is better)
Translates to: TLCNTVYKLQNVFDILWVIPRCS*RKDPYQ
Trigger: CTGGTATGGATCTTTTCTCCAACTGCACCGAGGAAT...GACCCACAAAATATCAAAGACATTCTGTAGTTTATACACCGTGTTGCAAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CAA 72 bp CTGGAAAGTGGTAACGCTCTTGTTACACTGGATCTCTaGTTTCATATCACAGCCATTCACACTTTAGTACTA +
Preference number: 4 (lower is better)
Translates to: LESGNALVTLDL*FHITAIHTLVL
Trigger: TAGTACTAAAGTGTGAATGGCTGTGATATGAAACAAGAGATCCAGTGTAACAAGAGCGTTACCACTTTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR TCA 90 bp TTTCTCATATATTCCCCAGATTTCAAAGAAGGCAGGACCATAAATGTAGAAGAGCTGAAACCTGCGAGCTaGAAGTTTTGTAATGTCCAA +
Preference number: 4 (lower is better)
Translates to: FLIYSPDFKEGRTINVEELKPAS*KFCNVQ
Trigger: TTGGACATTACAAAACTTTCAGCTCGCAGGTTTCAG...CTCTTCTACATTTATGGTCCTGCCTTCTTTGAAATCTGGGGAATATATGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR TCA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAACACCAACATGATATCTaGCTTGCTGAGTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKHQHDI*LAEFLL
Trigger: AAGAAGAAACTCAGCAAGTCAGATATCATGTTGGTG...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp ACACTTTGCAACACGGTGTATAAACTACAGAATGTCTTTGATATTTTGTGGGTCCTTTACATTCCTCGGTaGAGTTGGAGAAAAGATCCA +
Preference number: 4 (lower is better)
Translates to: TLCNTVYKLQNVFDILWVLYIPR*SWRKDP
Trigger: TGGATCTTTTCTCCAACTGCACCGAGGAATGTAAAG...GACCCACAAAATATCAAAGACATTCTGTAGTTTATACACCGTGTTGCAAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR GCA 90 bp ATAAATCTCAAAGTTGCACCGTTAGAGTTCTGCATTCATTTCAGATCACCTTACCTTTACATTCCTCGGTaGAGTTGGAGAAAAGATCCA +
Preference number: 4 (lower is better)
Translates to: INLKVAPLEFCIHFRSPYLYIPR*SWRKDP
Trigger: TGGATCTTTTCTCCAACTGCACCGAGGAATGTAAAG...GTAAGGTGATCTGAAATGAATGCAGAACTCTAACGGTGCAACTTTGAGATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CCA 90 bp ACATGGATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATACATTTTCAAATATGGTaGTTTGTAAGGCGCTCGTGT +
Preference number: 4 (lower is better)
Translates to: TWMLNNALLNDNLVKENIHFQIW*FVRRSC
Trigger: ACACGAGCGCCTTACAAACCACCATATTTGAAAATG...TATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCATCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CAA 72 bp CACAATATTAGCAGACTGAATATGGAAACAGTCAGATaGAATGTGAAAATTACACTGCCTCTCCGTGATGTG +
Preference number: 4 (lower is better)
Translates to: HNISRLNMETVR*NVKITLPLRDV
Trigger: CACATCACGGAGAGGCAGTGTAATTTTCACATTCAATCTGACTGTTTCCATATTCAGTCTGCTAATATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CAA 72 bp TTTTATGATGGATTGTTCTGGAAAGTGGTAACGCTCTaGTTACACTGGATCTCTTGTTTCATATCACAGCCA +
Preference number: 4 (lower is better)
Translates to: FYDGLFWKVVTL*LHWISCFISQP
Trigger: TGGCTGTGATATGAAACAAGAGATCCAGTGTAACAAGAGCGTTACCACTTTCCAGAACAATCCATCATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR GCA 90 bp ACATGGATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATAATGTGGTTGTTTGCTTaGCTCCATCTTTCGTTAAAT +
Preference number: 4 (lower is better)
Translates to: TWMLNNALLNDNLVKENIMWLFA*LHLSLN
Trigger: ATTTAACGAAAGATGGAGGCAAGCAAACAACCACAT...TATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCATCCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CAA 72 bp TCTGTGCTCCGCCTGACAATATTAACAGCTACATCTTaGGCATTGAAAATTCACAATGAGTTCTTGACAAAA +
Preference number: 4 (lower is better)
Translates to: SVLRLTILTATS*ALKIHNEFLTK
Trigger: TTTTGTCAAGAACTCATTGTGAATTTTCAATGCCAAAGATGTAGCTGTTAATATTGTCAGGCGGAGCACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CAA 72 bp CCTTATTTAACTTGGCAAACATTCATCACATTCAGTTaGATCAACCGAACTCCATACACAACTCTGCAAGAT +
Preference number: 4 (lower is better)
Translates to: PYLTWQTFITFS*INRTPYTTLQD
Trigger: ATCTTGCAGAGTTGTGTATGGAGTTCGGTTGATCAAACTGAATGTGATGAATGTTTGCCAAGTTAAATAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CAA 72 bp AAAGCAAAGAAACACGGCAAGTGCACATCATATATGTaGTTTGGAAAAATAGCCACATCACATGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: KAKKHGKCTSYM*FGKIATSHERS
Trigger: ACTTCTCTCATGTGATGTGGCTATTTTTCCAAACAACATATATGATGTGCACTTGCCGTGTTTCTTTGCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CAA 72 bp ATGAATGGTACTTCAAAAAGCAACACAGTTGCATCTTaGCTTAGAGATCAGAAAAGAATCAGGGTGCAAACA +
Preference number: 4 (lower is better)
Translates to: MNGTSKSNTVAS*LRDQKRIRVQT
Trigger: TGTTTGCACCCTGATTCTTTTCTGATCTCTAAGCAAAGATGCAACTGTGTTGCTTTTTGAAGTACCATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR CAA 72 bp TTCTTTTTCAAATGGTCCCTCGGAGACACAATGATGTaGACATTATGTTGCTATAAGCTAATTGGCGTTATA +
Preference number: 4 (lower is better)
Translates to: FFFKWSLGDTMM*TLCCYKLIGVI
Trigger: TATAACGCCAATTAGCTTATAGCAACATAATGTCAACATCATTGTGTCTCCGAGGGACCATTTGAAAAAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
3UTR CAA 72 bp TGTGTAGAGAGGTTCGTTTCTATATCTCATTTTGGATaGATGTACACGCACCTTTATATCCTTCAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: CVERFVSISHFG*MYTHLYILQFN
Trigger: ATTGAACTGAAGGATATAAAGGTGCGTGTACATCAATCCAAAATGAGATATAGAAACGAACCTCTCTACACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
3UTR CAA 72 bp ATAGAAATGCAGTTTGCCTACATTGTCATAGTTAGTTaGCTGTTATTCTTGGGCATTCTGAACTGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: IEMQFAYIVIVS*LLFLGILNCCL
Trigger: TAAGCAACAGTTCAGAATGCCCAAGAATAACAGCAAACTAACTATGACAATGTAGGCAAACTGCATTTCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
3UTR CAA 72 bp GCATCTTTATACATTGTCTATTTCCTACTTGTTCAGTaGGTTATCAATGGTGGTTCTAATGCTTTACATGCA +
Preference number: 4 (lower is better)
Translates to: ASLYIVYFLLVQ*VINGGSNALHA
Trigger: TGCATGTAAAGCATTAGAACCACCATTGATAACCAACTGAACAAGTAGGAAATAGACAATGTATAAAGATGC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS CCA 90 bp CGCGCACCTCGATCACCAGCTCATAAGGCCGCTGGGGGTCGCGCTTaGCTGGGACCCGGCGCGCGGTGCGGAGCTCTCCGGTGCGCCAGT +
Preference number: 5 (lower is better)
Translates to: RAPRSPAHKAAGGRA*LGPGARCGALRCAS
Trigger: ACTGGCGCACCGGAGAGCTCCGCACCGCGCGCCGGGTCCCAGCCAAGCGCGACCCCCAGCGGCCTTATGAGCTGGTGATCGAGGTGCGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 90 bp CACCTCGATCACCAGCTCATAAGGCCGCTGGGGGTCGCGCTTGGCTaGGACCCGGCGCGCGGTGCGGAGCTCTCCGGTGCGCCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: HLDHQLIRPLGVALG*DPARGAELSGAPVQ
Trigger: CTGGACTGGCGCACCGGAGAGCTCCGCACCGCGCGCCGGGTCCCAGCCAAGCGCGACCCCCAGCGGCCTTATGAGCTGGTGATCGAGGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 90 bp GGTCGCGCTTGGCTGGGACCCGGCGCGCGGTGCGGAGCTCTCCGGTaGGCCAGTCCAGTCGAAAGAGGTTCATTTCGTTGCCCCGCACTA +
Preference number: 5 (lower is better)
Translates to: GRAWLGPGARCGALR*ASPVERGSFRCPAL
Trigger: TAGTGCGGGGCAACGAAATGAACCTCTTTCGACTGGACTGGCGCACCGGAGAGCTCCGCACCGCGCGCCGGGTCCCAGCCAAGCGCGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 90 bp CATAAGGCCGCTGGGGGTCGCGCTTGGCTGGGACCCGGCGCGCGGTaGGGAGCTCTCCGGTGCGCCAGTCCAGTCGAAAGAGGTTCATTT +
Preference number: 5 (lower is better)
Translates to: HKAAGGRAWLGPGAR*GALRCASPVERGSF
Trigger: AAATGAACCTCTTTCGACTGGACTGGCGCACCGGAGAGCTCCGCACCGCGCGCCGGGTCCCAGCCAAGCGCGACCCCCAGCGGCCTTATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 90 bp GGCTCTCTTCATAGTCCAGCTCGCCGCTCACCTCCAGCCGGCCGGTaGGCGGCGACAGTCCGAAGAGCTCCCGAGCCCTGGGTGAAATGT +
Preference number: 5 (lower is better)
Translates to: GSLHSPARRSPPAGR*AATVRRAPEPWVKC
Trigger: ACATTTCACCCAGGGCTCGGGAGCTCTTCGGACTGTCGCCGCGCACCGGCCGGCTGGAGGTGAGCGGCGAGCTGGACTATGAAGAGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS TCA 90 bp CCACGATGGCGGGGGCGTTGTCGTTCTGATCCACTATCAAGATGTTaGCCGTGGCATTGCCGGCCAGCGCCTGGGGACTGCCGGCGTCCC +
Preference number: 5 (lower is better)
Translates to: PRWRGRCRSDPLSRC*PWHCRPAPGDCRRP
Trigger: GGGACGCCGGCAGTCCCCAGGCGCTGGCCGGCAATGCCACGGTCAACATCTTGATAGTGGATCAGAACGACAACGCCCCCGCCATCGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 90 bp TGGTCCCCACGTCTGGGTCGAAGGCGCTCTCCAAGGGAAAGCGGGTaGCTGGCGTGGCGCTCTCTGAGATCTCCACTGTCAGGTCGGGCT +
Preference number: 5 (lower is better)
Translates to: WSPRLGRRRSPRESG*LAWRSLRSPLSGRA
Trigger: AGCCCGACCTGACAGTGGAGATCTCAGAGAGCGCCACGCCAGGCACCCGCTTTCCCTTGGAGAGCGCCTTCGACCCAGACGTGGGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS TCA 90 bp GAAGGCGCTCTCCAAGGGAAAGCGGGTGCCTGGCGTGGCGCTCTCTaGGATCTCCACTGTCAGGTCGGGCTCTGGGAAGGAGGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: EGALQGKAGAWRGAL*DLHCQVGLWEGGRV
Trigger: AACCCTCCCTCCTTCCCAGAGCCCGACCTGACAGTGGAGATCTCAGAGAGCGCCACGCCAGGCACCCGCTTTCCCTTGGAGAGCGCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS TCA 90 bp CCGGCCGGTGCGCGGCGACAGTCCGAAGAGCTCCCGAGCCCTGGGTaGAATGTGACTACTGAACGAGTACACGACCTCGCCATTCTGGCC +
Preference number: 5 (lower is better)
Translates to: PAGARRQSEELPSPG*NVTTERVHDLAILA
Trigger: GGCCAGAATGGCGAGGTCGTGTACTCGTTCAGTAGTCACATTTCACCCAGGGCTCGGGAGCTCTTCGGACTGTCGCCGCGCACCGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 90 bp TGGCTCCGCAGGGATTGTGCTCAGCATCTGTACTCCGGGAAGGGCTaGAGGGCTTCAGGAACATCAGGTCGGTCTTGGCGGACTCCGGGG +
Preference number: 5 (lower is better)
Translates to: WLRRDCAQHLYSGKG*RASGTSGRSWRTPG
Trigger: CCCCGGAGTCCGCCAAGACCGACCTGATGTTCCTGAAGCCCTGCAGCCCTTCCCGGAGTACAGATGCTGAGCACAATCCCTGCGGAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS TCA 90 bp CCAGTCGAAAGAGGTTCATTTCGTTGCCCCGCACTATGCTGTAGGTaGGCCTGGCGTTCTCGCCGTCGTCCGCGTCCACTGCGGCCACAC +
Preference number: 5 (lower is better)
Translates to: PVERGSFRCPALCCR*AWRSRRRPRPLRPH
Trigger: GTGTGGCCGCAGTGGACGCGGACGACGGCGAGAACGCCAGGCTCACCTACAGCATAGTGCGGGGCAACGAAATGAACCTCTTTCGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 90 bp GACTTGAGGCGGAACGGCACGTCTCCCAGAAGCTCACACTGCACCTaGCCGTTCTCCTCTGAGTCCCGATCGGTCACGCTGAACAGAGCC +
Preference number: 5 (lower is better)
Translates to: DLRRNGTSPRSSHCT*PFSSESRSVTLNRA
Trigger: GGCTCTGTTCAGCGTGACCGATCGGGACTCAGAGGAGAACGGGCAGGTGCAGTGTGAGCTTCTGGGAGACGTGCCGTTCCGCCTCAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 90 bp GGTTGCTGGTCGCTGTACCCGGTGACGATGGCTCCGCAGGGATTGTaGTCAGCATCTGTACTCCGGGAAGGGCTGCAGGGCTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: GCWSLYPVTMAPQGL*SASVLREGLQGFRN
Trigger: GTTCCTGAAGCCCTGCAGCCCTTCCCGGAGTACAGATGCTGAGCACAATCCCTGCGGAGCCATCGTCACCGGGTACAGCGACCAGCAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS-3UTR CAA 90 bp AGTGGGGCAGAAGAAGATGGGTGGGAACACCATCATAGAGACAAAGAGGAGGGACTTGCGCGCCCGGGCTaGGCGGCCGCAGCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: SGAEEDGWEHHHRDKEEGLARPG*AAAAGG
Trigger: TCCACCTGCTGCGGCCGCCAAGCCCGGGCGCGCAAG...TCCCTCCTCTTTGTCTCTATGATGGTGTTCCCACCCATCTTCTTCTGCCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACACTTGCGCGCCCGGGCTaGGCGGCCGCAGCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTLARPG*AAAAGG
Trigger: TCCACCTGCTGCGGCCGCCAAGCCCGGGCGCGCAAG...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS GCA 90 bp CGTCCAACTCCTTCCTCTCCAGGGTGCCATGCAGGGCCTTCTCTTTaGCGAAAGTGGAGAAGGAGCGCTCTGCCCCAGGCTGGACTTCTG +
Preference number: 5 (lower is better)
Translates to: RPTPSSPGCHAGPSL*RKWRRSALPQAGLL
Trigger: CAGAAGTCCAGCCTGGGGCAGAGCGCTCCTTCTCCACTTTCGGCAAAGAGAAGGCCCTGCATGGCACCCTGGAGAGGAAGGAGTTGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS CCA 90 bp ATTTGGGGTTATCTCGTAGTCTCGCAAGGAGTTGGTCCCCACGTCTaGGTCGAAGGCGCTCTCCAAGGGAAAGCGGGTGCCTGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: IWGYLVVSQGVGPHV*VEGALQGKAGAWRG
Trigger: GCCACGCCAGGCACCCGCTTTCCCTTGGAGAGCGCCTTCGACCCAGACGTGGGGACCAACTCCTTGCGAGACTACGAGATAACCCCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 90 bp AAGGAAGACTTGAGGCGGAACGGCACGTCTCCCAGAAGCTCACACTaGACCTGCCCGTTCTCCTCTGAGTCCCGATCGGTCACGCTGAAC +
Preference number: 5 (lower is better)
Translates to: KEDLRRNGTSPRSSH*TCPFSSESRSVTLN
Trigger: GTTCAGCGTGACCGATCGGGACTCAGAGGAGAACGGGCAGGTGCAGTGTGAGCTTCTGGGAGACGTGCCGTTCCGCCTCAAGTCTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 90 bp GCCATGCAGGGCCTTCTCTTTGCCGAAAGTGGAGAAGGAGCGCTCTaGCCCAGGCTGGACTTCTGGAGGTTCAAAGACCTCGGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: AMQGLLFAESGEGAL*PRLDFWRFKDLGVW
Trigger: CCAGACACCGAGGTCTTTGAACCTCCAGAAGTCCAGCCTGGGGCAGAGCGCTCCTTCTCCACTTTCGGCAAAGAGAAGGCCCTGCATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS CCA 90 bp CATTGTCATTCACATCTGACACTTGAACCTGGATCGACTTACTGGTaGAGAGTGCAGGCTCGCCCCGGTCGCGGGCCACCACGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: HCHSHLTLEPGSTYW*RVQARPGRGPPRSG
Trigger: CCCTGACCGTGGTGGCCCGCGACCGGGGCGAGCCTGCACTCTCCACCAGTAAGTCGATCCAGGTTCAAGTGTCAGATGTGAATGACAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 90 bp GCGCATTGTCATTCACATCTGACACTTGAACCTGGATCGACTTACTaGTGGAGAGTGCAGGCTCGCCCCGGTCGCGGGCCACCACGGTCA +
Preference number: 5 (lower is better)
Translates to: AHCHSHLTLEPGSTY*WRVQARPGRGPPRS
Trigger: TGACCGTGGTGGCCCGCGACCGGGGCGAGCCTGCACTCTCCACCAGTAAGTCGATCCAGGTTCAAGTGTCAGATGTGAATGACAATGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 90 bp TCCTCTACCGGCACCTGGGCCGGGTTGCTAGGGACGTTGGCGCTCTaGACCAACATGATATCTGACTTGCTGAGTTTCTTCTTGCGCGCC +
Preference number: 5 (lower is better)
Translates to: SSTGTWAGLLGTLAL*TNMISDLLSFFLRA
Trigger: GGCGCGCAAGAAGAAACTCAGCAAGTCAGATATCATGTTGGTGCAGAGCGCCAACGTCCCTAGCAACCCGGCCCAGGTGCCGGTAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 90 bp CCTCGGTGTCTGGAACAGAGTCCATGCCGGGGACATGCAGGTTGCTaGGGTAATCTGCAGCCTGGCGTCCATCCGAAGGGACAAAAGAAG +
Preference number: 5 (lower is better)
Translates to: PRCLEQSPCRGHAGC*GNLQPGVHPKGQKK
Trigger: CTTCTTTTGTCCCTTCGGATGGACGCCAGGCTGCAGATTACCGCAGCAACCTGCATGTCCCCGGCATGGACTCTGTTCCAGACACCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS GCA 90 bp AGACCTCGGTGTCTGGAACAGAGTCCATGCCGGGGACATGCAGGTTaGTGCGGTAATCTGCAGCCTGGCGTCCATCCGAAGGGACAAAAG +
Preference number: 5 (lower is better)
Translates to: RPRCLEQSPCRGHAG*CGNLQPGVHPKGQK
Trigger: CTTTTGTCCCTTCGGATGGACGCCAGGCTGCAGATTACCGCAGCAACCTGCATGTCCCCGGCATGGACTCTGTTCCAGACACCGAGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS GCA 90 bp GGACTTCTGGAGGTTCAAAGACCTCGGTGTCTGGAACAGAGTCCATaGCGGGGACATGCAGGTTGCTGCGGTAATCTGCAGCCTGGCGTC +
Preference number: 5 (lower is better)
Translates to: GLLEVQRPRCLEQSP*RGHAGCCGNLQPGV
Trigger: GACGCCAGGCTGCAGATTACCGCAGCAACCTGCATGTCCCCGGCATGGACTCTGTTCCAGACACCGAGGTCTTTGAACCTCCAGAAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS CCA 90 bp CTCTGCCCCAGGCTGGACTTCTGGAGGTTCAAAGACCTCGGTGTCTaGAACAGAGTCCATGCCGGGGACATGCAGGTTGCTGCGGTAATC +
Preference number: 5 (lower is better)
Translates to: LCPRLDFWRFKDLGV*NRVHAGDMQVAAVI
Trigger: GATTACCGCAGCAACCTGCATGTCCCCGGCATGGACTCTGTTCCAGACACCGAGGTCTTTGAACCTCCAGAAGTCCAGCCTGGGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS CCA 90 bp TTTGCCGAAAGTGGAGAAGGAGCGCTCTGCCCCAGGCTGGACTTCTaGAGGTTCAAAGACCTCGGTGTCTGGAACAGAGTCCATGCCGGG +
Preference number: 5 (lower is better)
Translates to: FAESGEGALCPRLDF*RFKDLGVWNRVHAG
Trigger: CCCGGCATGGACTCTGTTCCAGACACCGAGGTCTTTGAACCTCCAGAAGTCCAGCCTGGGGCAGAGCGCTCCTTCTCCACTTTCGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS GCA 90 bp TGGAACAGAGTCCATGCCGGGGACATGCAGGTTGCTGCGGTAATCTaGAGCCTGGCGTCCATCCGAAGGGACAAAAGAAGGCATCCAGCA +
Preference number: 5 (lower is better)
Translates to: WNRVHAGDMQVAAVI*SLASIRRDKRRHPA
Trigger: TGCTGGATGCCTTCTTTTGTCCCTTCGGATGGACGCCAGGCTGCAGATTACCGCAGCAACCTGCATGTCCCCGGCATGGACTCTGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS CCA 90 bp GCGAGAAGTAGCTATTTGGGGTTATCTCGTAGTCTCGCAAGGAGTTaGTCCCCACGTCTGGGTCGAAGGCGCTCTCCAAGGGAAAGCGGG +
Preference number: 5 (lower is better)
Translates to: ARSSYLGLSRSLARS*SPRLGRRRSPRESG
Trigger: CCCGCTTTCCCTTGGAGAGCGCCTTCGACCCAGACGTGGGGACCAACTCCTTGCGAGACTACGAGATAACCCCAAATAGCTACTTCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 90 bp GCCTTCTCTTTGCCGAAAGTGGAGAAGGAGCGCTCTGCCCCAGGCTaGACTTCTGGAGGTTCAAAGACCTCGGTGTCTGGAACAGAGTCC +
Preference number: 5 (lower is better)
Translates to: AFSLPKVEKERSAPG*TSGGSKTSVSGTES
Trigger: GGACTCTGTTCCAGACACCGAGGTCTTTGAACCTCCAGAAGTCCAGCCTGGGGCAGAGCGCTCCTTCTCCACTTTCGGCAAAGAGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACAATGTTGACCGTGGCATaGCCGGCCAGCGCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTMLTVA*PASAWG
Trigger: TCCCCAGGCGCTGGCCGGCAATGCCACGGTCAACAT...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CAA 90 bp CATTCAAATTCACACTGTGTGGGCATTCGGCTTCAAGAGCTTGTGTTAAAGCTGCTTGCGCGCCCGGGCTaGGCGGCCGCAGCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: HSNSHCVGIRLQELVLKLLARPG*AAAAGG
Trigger: TCCACCTGCTGCGGCCGCCAAGCCCGGGCGCGCAAG...CAGCTTTAACACAAGCTCTTGAAGCCGAATGCCCACACAGTGTGAATTTGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS GCA 90 bp GTATTAGACAGCAATCCGTCCAACTCCTTCCTCTCCAGGGTGCCATaGAGGGCCTTCTCTTTGCCGAAAGTGGAGAAGGAGCGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: VLDSNPSNSFLSRVP*RAFSLPKVEKERSA
Trigger: GGCAGAGCGCTCCTTCTCCACTTTCGGCAAAGAGAAGGCCCTGCATGGCACCCTGGAGAGGAAGGAGTTGGACGGATTGCTGTCTAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp AACACTGGCTACTCTTCCAGAGGTCGTGAATTCAATTCCCAGAATCCACATGGTGGCACCTGGGCCGGGTaGCTAGGGACGTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: NTGYSSRGREFNSQNPHGGTWAG*LGTLAL
Trigger: GAGCGCCAACGTCCCTAGCAACCCGGCCCAGGTGCC...ACCATGTGGATTCTGGGAATTGAATTCACGACCTCTGGAAGAGTAGCCAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS TCA 90 bp TGCAGGGCTTCAGGAACATCAGGTCGGTCTTGGCGGACTCCGGGGTaGGGCAGACCTGATAGCAATAGTTCTGATTGTGGTGATGGGAAC +
Preference number: 5 (lower is better)
Translates to: CRASGTSGRSWRTPG*GRPDSNSSDCGDGN
Trigger: GTTCCCATCACCACAATCAGAACTATTGCTATCAGGTCTGCCTCACCCCGGAGTCCGCCAAGACCGACCTGATGTTCCTGAAGCCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 90 bp GTTCTCGGTCCAGTGGCTTCTCCAGGACCAGTTCGGCGAATCGGTTaGCATCTCCCTGGGTCTGTACGTCTAGCGAGAAGTAGCTATTTG +
Preference number: 5 (lower is better)
Translates to: VLGPVASPGPVRRIG*HLPGSVRLARSSYL
Trigger: CAAATAGCTACTTCTCGCTAGACGTACAGACCCAGGGAGATGGCAACCGATTCGCCGAACTGGTCCTGGAGAAGCCACTGGACCGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 90 bp ACGACCTCGCCATTCTGGCCTTCATCAGGGTCGGTGGCATTAAGCTaGATCACTAGCGTGCCAGGGGGAGAATTCTCTGGTAGGGAAACT +
Preference number: 5 (lower is better)
Translates to: TTSPFWPSSGSVALS*ITSVPGGEFSGRET
Trigger: AGTTTCCCTACCAGAGAATTCTCCCCCTGGCACGCTAGTGATCCAGCTTAATGCCACCGACCCTGATGAAGGCCAGAATGGCGAGGTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS-3UTR CAA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACAGCGGGCACATTGTCGTaGGAGTCGAGCACTCGGATG +
Preference number: 5 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTAGTLS*ESSTRM
Trigger: CATCCGAGTGCTCGACTCCAACGACAATGTGCCCGC...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CAA 90 bp CTCCCATCCTCCTGCCCTGGTATTCCCCTACACTGGGGTGTTGAACATCCTCAGTCAAAAGCGGGCACATaGTCGTTGGAGTCGAGCACT +
Preference number: 5 (lower is better)
Translates to: LPSSCPGIPLHWGVEHPQSKAGT*SLESST
Trigger: AGTGCTCGACTCCAACGACAATGTGCCCGCTTTTGA...CTGAGGATGTTCAACACCCCAGTGTAGGGGAATACCAGGGCAGGAGGATGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS TCA 90 bp CGCGATCTATCTTCTCGTTTACGTACAGAACCCCGGTCTCCAGATTaGGGTCCAAGTAAGGGGTCCGTGAGTTGGCCACCGTCTGAAACC +
Preference number: 5 (lower is better)
Translates to: RDLSSRLRTEPRSPD*GPSKGSVSWPPSET
Trigger: GGTTTCAGACGGTGGCCAACTCACGGACCCCTTACTTGGACCTCAATCTGGAGACCGGGGTTCTGTACGTAAACGAGAAGATAGATCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 90 bp CTTACCTCGTTGGACAAAATGCTTCCGTTGGAAATGATGTCTGGTTaGTGGTCGCTGTACCCGGTGACGATGGCTCCGCAGGGATTGTGC +
Preference number: 5 (lower is better)
Translates to: LTSLDKMLPLEMMSG*WSLYPVTMAPQGLC
Trigger: GCACAATCCCTGCGGAGCCATCGTCACCGGGTACAGCGACCAGCAACCAGACATCATTTCCAACGGAAGCATTTTGTCCAACGAGGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS CCA 90 bp ACCTCGTTGGACAAAATGCTTCCGTTGGAAATGATGTCTGGTTGCTaGTCGCTGTACCCGGTGACGATGGCTCCGCAGGGATTGTGCTCA +
Preference number: 5 (lower is better)
Translates to: TSLDKMLPLEMMSGC*SLYPVTMAPQGLCS
Trigger: TGAGCACAATCCCTGCGGAGCCATCGTCACCGGGTACAGCGACCAGCAACCAGACATCATTTCCAACGGAAGCATTTTGTCCAACGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS CCA 90 bp CAGCCTTACCTCGTTGGACAAAATGCTTCCGTTGGAAATGATGTCTaGTTGCTGGTCGCTGTACCCGGTGACGATGGCTCCGCAGGGATT +
Preference number: 5 (lower is better)
Translates to: QPYLVGQNASVGNDV*LLVAVPGDDGSAGI
Trigger: AATCCCTGCGGAGCCATCGTCACCGGGTACAGCGACCAGCAACCAGACATCATTTCCAACGGAAGCATTTTGTCCAACGAGGTAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CAA 90 bp AATGCTGCATTTGACACAGAAACTGTCAAGATTACAGTCAGCATAATCCCTTCACTTGCGCGCCCGGGCTaGGCGGCCGCAGCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: NAAFDTETVKITVSIIPSLARPG*AAAAGG
Trigger: TCCACCTGCTGCGGCCGCCAAGCCCGGGCGCGCAAG...TGAAGGGATTATGCTGACTGTAATCTTGACAGTTTCTGTGTCAAATGCAGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS GCA 90 bp AAGACCTCCAGGTGCAGGACACAAGAGGGGCTCTGCTTACAGATTTaGTCGCGATCTATCTTCTCGTTTACGTACAGAACCCCGGTCTCC +
Preference number: 5 (lower is better)
Translates to: KTSRCRTQEGLCLQI*SRSIFSFTYRTPVS
Trigger: GGAGACCGGGGTTCTGTACGTAAACGAGAAGATAGATCGCGAGCAAATCTGTAAGCAGAGCCCCTCTTGTGTCCTGCACCTGGAGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 90 bp TTCTCGTTGGACAAAATGCTTCCGTTGGAAATGATGTCTGGTTGCTaGTCGCTGTACCCGGTGACGATGGCTCCGCAGGGATTGTGCTCA +
Preference number: 5 (lower is better)
Translates to: FSLDKMLPLEMMSGC*SLYPVTMAPQGLCS
Trigger: TGAGCACAATCCCTGCGGAGCCATCGTCACCGGGTACAGCGACCAGCAACCAGACATCATTTCCAACGGAAGCATTTTGTCCAACGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp CTGAACATCTCCCAGTGGAAGAGAACCCTTTGTTTGTGGTTGAGATCTGGAAAGGTAGCGGTGCACCGCTaGCTGTTCTCGGTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: LNISQWKRTLCLWLRSGKVAVHR*LFSVQW
Trigger: CCACTGGACCGAGAACAGCAAGCGGTGCACCGCTAC...CTTTCCAGATCTCAACCACAAACAAAGGGTTCTCTTCCACTGGGAGATGTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp CTTCCGTGTCCCCTGGGAACTGAATTCCAGTCTTCTGCAGTAGCATTAAGTGTTGCGGGCACATTGTCGTaGGAGTCGAGCACTCGGATG +
Preference number: 5 (lower is better)
Translates to: LPCPLGTEFQSSAVALSVAGTLS*ESSTRM
Trigger: CATCCGAGTGCTCGACTCCAACGACAATGTGCCCGC...AACACTTAATGCTACTGCAGAAGACTGGAATTCAGTTCCCAGGGGACACGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp AAGCTCCCCAAGGCCCACACACCTTCCCAGTCCAAACTTTGCTTTACAAGGCTCCTGAAGCGCGGCGCATaGTCATTCACATCTGACACT +
Preference number: 5 (lower is better)
Translates to: KLPKAHTPSQSKLCFTRLLKRGA*SFTSDT
Trigger: AGTGTCAGATGTGAATGACAATGCGCCGCGCTTCAG...GAGCCTTGTAAAGCAAAGTTTGGACTGGGAAGGTGTGTGGGCCTTGGGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CAA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTGGCACCTGGGCCGGGTaGCTAGGGACGTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: SIRIKVILLPAILWRHTAGTWAG*LGTLAL
Trigger: GAGCGCCAACGTCCCTAGCAACCCGGCCCAGGTGCC...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CAA 90 bp AACACTGGCTACTCTTCCAGAGGTCGTGAATTCAATTCCCAGAATCCACATGGTAACATCAGGTCGGTCTaGGCGGACTCCGGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: NTGYSSRGREFNSQNPHGNIRSV*ADSGVR
Trigger: CCTCACCCCGGAGTCCGCCAAGACCGACCTGATGTT...ACCATGTGGATTCTGGGAATTGAATTCACGACCTCTGGAAGAGTAGCCAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS GCA 90 bp TTATTCTCGTTGGACAAAATGCTTCCGTTGGAAATGATGTCTGGTTaGTGGTCGCTGTACCCGGTGACGATGGCTCCGCAGGGATTGTGC +
Preference number: 5 (lower is better)
Translates to: LFSLDKMLPLEMMSG*WSLYPVTMAPQGLC
Trigger: GCACAATCCCTGCGGAGCCATCGTCACCGGGTACAGCGACCAGCAACCAGACATCATTTCCAACGGAAGCATTTTGTCCAACGAGAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp CATTCAAATTCACACTGTGTGGGCATTCGGCTTCAAGAGCTTGTGTTAAAGCTGGTAGCGGTGCACCGCTaGCTGTTCTCGGTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: HSNSHCVGIRLQELVLKLVAVHR*LFSVQW
Trigger: CCACTGGACCGAGAACAGCAAGCGGTGCACCGCTAC...CAGCTTTAACACAAGCTCTTGAAGCCGAATGCCCACACAGTGTGAATTTGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CAA 90 bp CTTCCGTGTCCCCTGGGAACTGAATTCCAGTCTTCTGCAGTAGCATTAAGTGTTACTCTCACCAGAACCTaGCAGTGCGCAGGCACAGCA +
Preference number: 5 (lower is better)
Translates to: LPCPLGTEFQSSAVALSVTLTRT*QCAGTA
Trigger: TGCTGTGCCTGCGCACTGCAAGGTTCTGGTGAGAGT...AACACTTAATGCTACTGCAGAAGACTGGAATTCAGTTCCCAGGGGACACGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp AGAACCCTTTGTTTGTGGTTGAGATCTGGAAAGGTTCACTGTTGCCATGTGACTTTGCTGAGTTTCTTCTaGCGCGCCCGGGCTTGGCGG +
Preference number: 5 (lower is better)
Translates to: RTLCLWLRSGKVHCCHVTLLSFF*RARAWR
Trigger: CCGCCAAGCCCGGGCGCGCAAGAAGAAACTCAGCAA...AGTCACATGGCAACAGTGAACCTTTCCAGATCTCAACCACAAACAAAGGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp AATGCTGCATTTGACACAGAAACTGTCAAGATTACAGTCAGCATAATCCCTTCAGGCACCTGGGCCGGGTaGCTAGGGACGTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: NAAFDTETVKITVSIIPSGTWAG*LGTLAL
Trigger: GAGCGCCAACGTCCCTAGCAACCCGGCCCAGGTGCC...TGAAGGGATTATGCTGACTGTAATCTTGACAGTTTCTGTGTCAAATGCAGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS GCA 90 bp GGGTTCTCCAGAAAGACCTCCAGGTGCAGGACACAAGAGGGGCTCTaGTTACAGATTTGCTCGCGATCTATCTTCTCGTTTACGTACAGA +
Preference number: 5 (lower is better)
Translates to: GFSRKTSRCRTQEGL*LQICSRSIFSFTYR
Trigger: TCTGTACGTAAACGAGAAGATAGATCGCGAGCAAATCTGTAAGCAGAGCCCCTCTTGTGTCCTGCACCTGGAGGTCTTTCTGGAGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 90 bp GTGTTTATTCTCGTTGGACAAAATGCTTCCGTTGGAAATGATGTCTaGTTGCTGGTCGCTGTACCCGGTGACGATGGCTCCGCAGGGATT +
Preference number: 5 (lower is better)
Translates to: VFILVGQNASVGNDV*LLVAVPGDDGSAGI
Trigger: AATCCCTGCGGAGCCATCGTCACCGGGTACAGCGACCAGCAACCAGACATCATTTCCAACGGAAGCATTTTGTCCAACGAGAATAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp GAGATCTGGAAAGGTTCACTGTTGCCATGTGACTTTTCTATTCCCCTCTGGCATAGTTCGGCGAATCGGTaGCCATCTCCCTGGGTCTGT +
Preference number: 5 (lower is better)
Translates to: EIWKGSLLPCDFSIPLWHSSANR*PSPWVC
Trigger: ACAGACCCAGGGAGATGGCAACCGATTCGCCGAACT...ATGCCAGAGGGGAATAGAAAAGTCACATGGCAACAGTGAACCTTTCCAGATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp GTGTGTAGTGTAGGTGGACGATGCTTCTATGTGAGTGGATGTGTCACAAAATTTGTAGCGGTGCACCGCTaGCTGTTCTCGGTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: VCSVGGRCFYVSGCVTKFVAVHR*LFSVQW
Trigger: CCACTGGACCGAGAACAGCAAGCGGTGCACCGCTAC...AAATTTTGTGACACATCCACTCACATAGAAGCATCGTCCACCTACACTACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp ATTAATGCCTGGGACAGATGCAAAGAGAAAAAGACCTTTGTCAGTGATTGGCCCGCGGGCACATTGTCGTaGGAGTCGAGCACTCGGATG +
Preference number: 5 (lower is better)
Translates to: INAWDRCKEKKTFVSDWPAGTLS*ESSTRM
Trigger: CATCCGAGTGCTCGACTCCAACGACAATGTGCCCGC...GGGCCAATCACTGACAAAGGTCTTTTTCTCTTTGCATCTGTCCCAGGCATTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CAA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACAAACTGTGTAGACGGGTaGGTCAAAAGCGGGCACATT +
Preference number: 5 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTNCVDG*VKSGHI
Trigger: AATGTGCCCGCTTTTGACCAACCCGTCTACACAGTT...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CAA 90 bp GAGATGCCAAGAGTGACTGTCATAACACTGCTCCATTTTCCCTCCAGAGGCCCTACCCAAGTCCTTGGCTaGGACATACACCTGATACAC +
Preference number: 5 (lower is better)
Translates to: EMPRVTVITLLHFPSRGPTQVLG*DIHLIH
Trigger: GTGTATCAGGTGTATGTCCAAGCCAAGGACTTGGGT...AGGGCCTCTGGAGGGAAAATGGAGCAGTGTTATGACAGTCACTCTTGGCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CAA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTATGTTGACCGTGGCATaGCCGGCCAGCGCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSMLTVA*PASAWG
Trigger: TCCCCAGGCGCTGGCCGGCAATGCCACGGTCAACAT...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp AAACAATCTATTGCTTACTGGTACACGCGACTGAAAACAGTGATAAACAAACCAGGCACCTGGGCCGGGTaGCTAGGGACGTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: KQSIAYWYTRLKTVINKPGTWAG*LGTLAL
Trigger: GAGCGCCAACGTCCCTAGCAACCCGGCCCAGGTGCC...TGGTTTGTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGATTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CAA 90 bp AGACTGTTAGGAACGACAGTCTCTGCAGTTAAAGATTCTTCAACATCTGTTAGAATGTTGACCGTGGCATaGCCGGCCAGCGCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: RLLGTTVSAVKDSSTSVRMLTVA*PASAWG
Trigger: TCCCCAGGCGCTGGCCGGCAATGCCACGGTCAACAT...TCTAACAGATGTTGAAGAATCTTTAACTGCAGAGACTGTCGTTCCTAACAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp TCTATTGCTTACTGGTACACGCGACTGAAAACAGTGATAAACAAACCAAAATGGATGTTGACCGTGGCATaGCCGGCCAGCGCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: SIAYWYTRLKTVINKPKWMLTVA*PASAWG
Trigger: TCCCCAGGCGCTGGCCGGCAATGCCACGGTCAACAT...CCATTTTGGTTTGTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CAA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTAACATCAGGTCGGTCTaGGCGGACTCCGGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: SIRIKVILLPAILWRHTANIRSV*ADSGVR
Trigger: CCTCACCCCGGAGTCCGCCAAGACCGACCTGATGTT...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CAA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTAACATCAGGTCGGTCTaGGCGGACTCCGGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSNIRSV*ADSGVR
Trigger: CCTCACCCCGGAGTCCGCCAAGACCGACCTGATGTT...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS CCA 90 bp ATGAGCCTCTCCACGCAGCTGCATCCACAGCATTTTCAAATATGGTaGTTTGTAAGGCGCTCGTGTATTAGACAGCAATCCGTCCAACTC +
Preference number: 5 (lower is better)
Translates to: MSLSTQLHPQHFQIW*FVRRSCIRQQSVQL
Trigger: GAGTTGGACGGATTGCTGTCTAATACACGAGCGCCTTACAAACCACCATATTTGAAAATGCTGTGGATGCAGCTGCGTGGAGAGGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAAGTAGCGGTGCACCGCTaGCTGTTCTCGGTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKVAVHR*LFSVQW
Trigger: CCACTGGACCGAGAACAGCAAGCGGTGCACCGCTAC...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CAA 90 bp TCAAATTCACACTGTGTGGGCATTCGGCTTCAAGAGCTTGTGTTAAAGCTGTCCTCAAAAGCGGGCACATaGTCGTTGGAGTCGAGCACT +
Preference number: 5 (lower is better)
Translates to: SNSHCVGIRLQELVLKLSSKAGT*SLESST
Trigger: AGTGCTCGACTCCAACGACAATGTGCCCGCTTTTGA...GGACAGCTTTAACACAAGCTCTTGAAGCCGAATGCCCACACAGTGTGAATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CAA 90 bp GAGATCTGGAAAGGTTCACTGTTGCCATGTGACTTTTCTATTCCCCTCTGGCATCTGAAGCGCGGCGCATaGTCATTCACATCTGACACT +
Preference number: 5 (lower is better)
Translates to: EIWKGSLLPCDFSIPLWHLKRGA*SFTSDT
Trigger: AGTGTCAGATGTGAATGACAATGCGCCGCGCTTCAG...ATGCCAGAGGGGAATAGAAAAGTCACATGGCAACAGTGAACCTTTCCAGATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp GCTCAAGGACATACAGATGTTTGGGAAGTGAGAGTTCTATCTTCCAGAATTTTTTTGCTGAGTTTCTTCTaGCGCGCCCGGGCTTGGCGG +
Preference number: 5 (lower is better)
Translates to: AQGHTDVWEVRVLSSRIFLLSFF*RARAWR
Trigger: CCGCCAAGCCCGGGCGCGCAAGAAGAAACTCAGCAA...AAAAATTCTGGAAGATAGAACTCTCACTTCCCAAACATCTGTATGTCCTTGAGC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CAA 90 bp AATGCTGCATTTGACACAGAAACTGTCAAGATTACAGTCAGCATAATCCCTTCATTGCTGAGTTTCTTCTaGCGCGCCCGGGCTTGGCGG +
Preference number: 5 (lower is better)
Translates to: NAAFDTETVKITVSIIPSLLSFF*RARAWR
Trigger: CCGCCAAGCCCGGGCGCGCAAGAAGAAACTCAGCAA...TGAAGGGATTATGCTGACTGTAATCTTGACAGTTTCTGTGTCAAATGCAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACAGACAAAATGCTTCCGTaGGAAATGATGTCTGGTTGC +
Preference number: 5 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTDKMLP*EMMSGC
Trigger: GCAACCAGACATCATTTCCAACGGAAGCATTTTGTC...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CAA 90 bp AATGCTGCATTTGACACAGAAACTGTCAAGATTACAGTCAGCATAATCCCTTCAGCGGGCACATTGTCGTaGGAGTCGAGCACTCGGATG +
Preference number: 5 (lower is better)
Translates to: NAAFDTETVKITVSIIPSAGTLS*ESSTRM
Trigger: CATCCGAGTGCTCGACTCCAACGACAATGTGCCCGC...TGAAGGGATTATGCTGACTGTAATCTTGACAGTTTCTGTGTCAAATGCAGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTACTCTCACCAGAACCTaGCAGTGCGCAGGCACAGCA +
Preference number: 5 (lower is better)
Translates to: SIRIKVILLPAILWRHTATLTRT*QCAGTA
Trigger: TGCTGTGCCTGCGCACTGCAAGGTTCTGGTGAGAGT...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CAA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTACTCTCACCAGAACCTaGCAGTGCGCAGGCACAGCA +
Preference number: 5 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSTLTRT*QCAGTA
Trigger: TGCTGTGCCTGCGCACTGCAAGGTTCTGGTGAGAGT...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp TTTAGGCAACCATATAAAGTTAAACAATCTATTGCTTACTGGTACACGCGACTGTTGCTGAGTTTCTTCTaGCGCGCCCGGGCTTGGCGG +
Preference number: 5 (lower is better)
Translates to: FRQPYKVKQSIAYWYTRLLLSFF*RARAWR
Trigger: CCGCCAAGCCCGGGCGCGCAAGAAGAAACTCAGCAA...CAGTCGCGTGTACCAGTAAGCAATAGATTGTTTAACTTTATATGGTTGCCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CAA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACAAACATGATATCTGACTaGCTGAGTTTCTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTNMISD*LSFFLR
Trigger: GCGCAAGAAGAAACTCAGCAAGTCAGATATCATGTT...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CAA 90 bp AAACAATCTATTGCTTACTGGTACACGCGACTGAAAACAGTGATAAACAAACCAAACATCAGGTCGGTCTaGGCGGACTCCGGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: KQSIAYWYTRLKTVINKPNIRSV*ADSGVR
Trigger: CCTCACCCCGGAGTCCGCCAAGACCGACCTGATGTT...TGGTTTGTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGATTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CAA 90 bp ATGAGATGTGGATGCTTTGAGCCAATCATCAGACTGAGCTCAGGGACCCTGATGGACAAAATGCTTCCGTaGGAAATGATGTCTGGTTGC +
Preference number: 5 (lower is better)
Translates to: MRCGCFEPIIRLSSGTLMDKMLP*EMMSGC
Trigger: GCAACCAGACATCATTTCCAACGGAAGCATTTTGTC...CATCAGGGTCCCTGAGCTCAGTCTGATGATTGGCTCAAAGCATCCACATCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp ACACTGATCGGAGAGGCAACACCGGTTGCCTATGGAGTTTCTACAGTCTGCACATGGTGTTTATTCTCGTaGGACAAAATGCTTCCGTTG +
Preference number: 5 (lower is better)
Translates to: TLIGEATPVAYGVSTVCTWCLFS*DKMLPL
Trigger: CAACGGAAGCATTTTGTCCAACGAGAATAAACACCA...TGTGCAGACTGTAGAAACTCCATAGGCAACCGGTGTTGCCTCTCCGATCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CAA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTTCAAAAGCGGGCACATaGTCGTTGGAGTCGAGCACT +
Preference number: 5 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSSKAGT*SLESST
Trigger: AGTGCTCGACTCCAACGACAATGTGCCCGCTTTTGA...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp GTGTGTAGTGTAGGTGGACGATGCTTCTATGTGAGTGGATGTGTCACAAAATTTACCCAAGTCCTTGGCTaGGACATACACCTGATACAC +
Preference number: 5 (lower is better)
Translates to: VCSVGGRCFYVSGCVTKFTQVLG*DIHLIH
Trigger: GTGTATCAGGTGTATGTCCAAGCCAAGGACTTGGGT...AAATTTTGTGACACATCCACTCACATAGAAGCATCGTCCACCTACACTACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp AAACAATCTATTGCTTACTGGTACACGCGACTGAAAACAGTGATAAACAAACCAACTCTCACCAGAACCTaGCAGTGCGCAGGCACAGCA +
Preference number: 5 (lower is better)
Translates to: KQSIAYWYTRLKTVINKPTLTRT*QCAGTA
Trigger: TGCTGTGCCTGCGCACTGCAAGGTTCTGGTGAGAGT...TGGTTTGTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CAA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTCTGAAGCGCGGCGCATaGTCATTCACATCTGACACT +
Preference number: 5 (lower is better)
Translates to: SIRIKVILLPAILWRHTALKRGA*SFTSDT
Trigger: AGTGTCAGATGTGAATGACAATGCGCCGCGCTTCAG...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CAA 90 bp CTTCCGTGTCCCCTGGGAACTGAATTCCAGTCTTCTGCAGTAGCATTAAGTGTTTGGTGTTTATTCTCGTaGGACAAAATGCTTCCGTTG +
Preference number: 5 (lower is better)
Translates to: LPCPLGTEFQSSAVALSVWCLFS*DKMLPL
Trigger: CAACGGAAGCATTTTGTCCAACGAGAATAAACACCA...AACACTTAATGCTACTGCAGAAGACTGGAATTCAGTTCCCAGGGGACACGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp ATGCCACAACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGGCGAGAAGTAGCTATTaGGGGTTATCTCGTAGTCTC +
Preference number: 5 (lower is better)
Translates to: MPQLLLISVLRQSSRLGLARSSY*GLSRSL
Trigger: GAGACTACGAGATAACCCCAAATAGCTACTTCTCGC...CAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGTTGTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp ATCTATTGTATTAGCTATCTAGGGTTGCTAAAGGAGACTCCCAAGAAGAGAGCAAACTGTGTAGACGGGTaGGTCAAAAGCGGGCACATT +
Preference number: 5 (lower is better)
Translates to: IYCISYLGLLKETPKKRANCVDG*VKSGHI
Trigger: AATGTGCCCGCTTTTGACCAACCCGTCTACACAGTT...TGCTCTCTTCTTGGGAGTCTCCTTTAGCAACCCTAGATAGCTAATACAATAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTAACTGTGTAGACGGGTaGGTCAAAAGCGGGCACATT +
Preference number: 5 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSNCVDG*VKSGHI
Trigger: AATGTGCCCGCTTTTGACCAACCCGTCTACACAGTT...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp CATTCAAATTCACACTGTGTGGGCATTCGGCTTCAAGAGCTTGTGTTAAAGCTGGACAAAATGCTTCCGTaGGAAATGATGTCTGGTTGC +
Preference number: 5 (lower is better)
Translates to: HSNSHCVGIRLQELVLKLDKMLP*EMMSGC
Trigger: GCAACCAGACATCATTTCCAACGGAAGCATTTTGTC...CAGCTTTAACACAAGCTCTTGAAGCCGAATGCCCACACAGTGTGAATTTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS CCA 90 bp CCAATGTGCAAAACAAGAAAGAGGGTGGAAATGATTCAAATATGGTaGTTTGTAAGGCGCTCGTGTATTAGACAGCAATCCGTCCAACTC +
Preference number: 5 (lower is better)
Translates to: PMCKTRKRVEMIQIW*FVRRSCIRQQSVQL
Trigger: GAGTTGGACGGATTGCTGTCTAATACACGAGCGCCTTACAAACCACCATATTTGAATCATTTCCACCCTCTTTCTTGTTTTGCACATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp ATCTATTGTATTAGCTATCTAGGGTTGCTAAAGGAGACTCCCAAGAAGAGAGCAGCGAGAAGTAGCTATTaGGGGTTATCTCGTAGTCTC +
Preference number: 5 (lower is better)
Translates to: IYCISYLGLLKETPKKRAARSSY*GLSRSL
Trigger: GAGACTACGAGATAACCCCAAATAGCTACTTCTCGC...TGCTCTCTTCTTGGGAGTCTCCTTTAGCAACCCTAGATAGCTAATACAATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp ACACTTTGCAACACGGTGTATAAACTACAGAATGTCTTTGATATTTTGTGGGTCTCAAAAGCGGGCACATaGTCGTTGGAGTCGAGCACT +
Preference number: 5 (lower is better)
Translates to: TLCNTVYKLQNVFDILWVSKAGT*SLESST
Trigger: AGTGCTCGACTCCAACGACAATGTGCCCGCTTTTGA...GACCCACAAAATATCAAAGACATTCTGTAGTTTATACACCGTGTTGCAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CAA 90 bp TCTAACACTCAGCTACACACAACTAACTGGATGGCCAAGATAATGAAGTTGAAAACCCAAGTCCTTGGCTaGGACATACACCTGATACAC +
Preference number: 5 (lower is better)
Translates to: SNTQLHTTNWMAKIMKLKTQVLG*DIHLIH
Trigger: GTGTATCAGGTGTATGTCCAAGCCAAGGACTTGGGT...TTTCAACTTCATTATCTTGGCCATCCAGTTAGTTGTGTGTAGCTGAGTGTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CAA 90 bp ATAAATCTCAAAGTTGCACCGTTAGAGTTCTGCATTCATTTCAGATCACCTTACCTGAAGCGCGGCGCATaGTCATTCACATCTGACACT +
Preference number: 5 (lower is better)
Translates to: INLKVAPLEFCIHFRSPYLKRGA*SFTSDT
Trigger: AGTGTCAGATGTGAATGACAATGCGCCGCGCTTCAG...GTAAGGTGATCTGAAATGAATGCAGAACTCTAACGGTGCAACTTTGAGATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp AGTATTAGAATCAAAGTCATATTATTGCCTGCTATACTCTGGCGGCACACAGCTCATTCCTCGGTGCAGTaGGAGAAAAGATCCATACCA +
Preference number: 5 (lower is better)
Translates to: SIRIKVILLPAILWRHTAHSSVQ*EKRSIP
Trigger: TGGTATGGATCTTTTCTCCAACTGCACCGAGGAATG...AGCTGTGTGCCGCCAGAGTATAGCAGGCAATAATATGACTTTGATTCTAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS CCA 90 bp CTTCCAATGTGCAAAACAAGAAAGAGGGTGGAAATGATTCAAATATaGTGGTTTGTAAGGCGCTCGTGTATTAGACAGCAATCCGTCCAA +
Preference number: 5 (lower is better)
Translates to: LPMCKTRKRVEMIQI*WFVRRSCIRQQSVQ
Trigger: TTGGACGGATTGCTGTCTAATACACGAGCGCCTTACAAACCACCATATTTGAATCATTTCCACCCTCTTTCTTGTTTTGCACATTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp TCTATTGCTTACTGGTACACGCGACTGAAAACAGTGATAAACAAACCAAAATGGGCGAGAAGTAGCTATTaGGGGTTATCTCGTAGTCTC +
Preference number: 5 (lower is better)
Translates to: SIAYWYTRLKTVINKPKWARSSY*GLSRSL
Trigger: GAGACTACGAGATAACCCCAAATAGCTACTTCTCGC...CCATTTTGGTTTGTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CAA 90 bp ACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTACACTCTGACAAAATGCTTCCGTaGGAAATGATGTCTGGTTGC +
Preference number: 5 (lower is better)
Translates to: TPFNFCFEAVIEAWFVHSDKMLP*EMMSGC
Trigger: GCAACCAGACATCATTTCCAACGGAAGCATTTTGTC...AGAGTGTACAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp ATGCCACAACTCCTTTTAATTTCTGTTTTGAGGCAGTCATCGAGGCTTGGTTTGTGGTGTTTATTCTCGTaGGACAAAATGCTTCCGTTG +
Preference number: 5 (lower is better)
Translates to: MPQLLLISVLRQSSRLGLWCLFS*DKMLPL
Trigger: CAACGGAAGCATTTTGTCCAACGAGAATAAACACCA...CAAACCAAGCCTCGATGACTGCCTCAAAACAGAAATTAAAAGGAGTTGTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp CAAACACAACTTTGTAGATTCTATCTGGTGAAACAGGCCTGTCATTTCAGTATGCATTCCTCGGTGCAGTaGGAGAAAAGATCCATACCA +
Preference number: 5 (lower is better)
Translates to: QTQLCRFYLVKQACHFSMHSSVQ*EKRSIP
Trigger: TGGTATGGATCTTTTCTCCAACTGCACCGAGGAATG...CATACTGAAATGACAGGCCTGTTTCACCAGATAGAATCTACAAAGTTGTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp TTTAGAATGTTGTATTTTGGGGGTAGAGAGATGGCTCAGCGATTCAGAACACTGCATGTGGTTGTTTGCTaGCCTCCATCTTTCGTTAAA +
Preference number: 5 (lower is better)
Translates to: FRMLYFGGREMAQRFRTLHVVVC*PPSFVK
Trigger: TTTAACGAAAGATGGAGGCAAGCAAACAACCACATG...CAGTGTTCTGAATCGCTGAGCCATCTCTCTACCCCCAAAATACAACATTCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp ACACTTTGCAACACGGTGTATAAACTACAGAATGTCTTTGATATTTTGTGGGTCGCGAGAAGTAGCTATTaGGGGTTATCTCGTAGTCTC +
Preference number: 5 (lower is better)
Translates to: TLCNTVYKLQNVFDILWVARSSY*GLSRSL
Trigger: GAGACTACGAGATAACCCCAAATAGCTACTTCTCGC...GACCCACAAAATATCAAAGACATTCTGTAGTTTATACACCGTGTTGCAAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170695.4
CDS-3UTR CAA 90 bp AAAGTTAAACAATCTATTGCTTACTGGTACACGCGACTGAAAACAGTGATAAACAACTGTGTAGACGGGTaGGTCAAAAGCGGGCACATT +
Preference number: 5 (lower is better)
Translates to: KVKQSIAYWYTRLKTVINNCVDG*VKSGHI
Trigger: AATGTGCCCGCTTTTGACCAACCCGTCTACACAGTT...GTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGATTGTTTAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CAA 90 bp ATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATAAAGAAAACCCAAGTCCTTGGCTaGGACATACACCTGATACAC +
Preference number: 5 (lower is better)
Translates to: MLNNALLNDNLVKENIKKTQVLG*DIHLIH
Trigger: GTGTATCAGGTGTATGTCCAAGCCAAGGACTTGGGT...TTTCTTTATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp TTTCTCATATATTCCCCAGATTTCAAAGAAGGCAGGACCATAAATGTAGAAGAGTTCAGCCTTACCTCGTaGGACAAAATGCTTCCGTTG +
Preference number: 5 (lower is better)
Translates to: FLIYSPDFKEGRTINVEEFSLTS*DKMLPL
Trigger: CAACGGAAGCATTTTGTCCAACGAGGTAAGGCTGAA...CTCTTCTACATTTATGGTCCTGCCTTCTTTGAAATCTGGGGAATATATGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS-3UTR CAA 90 bp ACATGGATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATAAACATGATATCTGACTaGCTGAGTTTCTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: TWMLNNALLNDNLVKENINMISD*LSFFLR
Trigger: GCGCAAGAAGAAACTCAGCAAGTCAGATATCATGTT...TATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCATCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp ATGCTGAACAACGCTCTACTCAATGATAACTTGGTCAAGGAAAACATAAAGAAACATTCCTCGGTGCAGTaGGAGAAAAGATCCATACCA +
Preference number: 5 (lower is better)
Translates to: MLNNALLNDNLVKENIKKHSSVQ*EKRSIP
Trigger: TGGTATGGATCTTTTCTCCAACTGCACCGAGGAATG...TTTCTTTATGTTTTCCTTGACCAAGTTATCATTGAGTAGAGCGTTGTTCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS-3UTR CAA 90 bp ATAAATCTCAAAGTTGCACCGTTAGAGTTCTGCATTCATTTCAGATCACCTTACAACATGATATCTGACTaGCTGAGTTTCTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: INLKVAPLEFCIHFRSPYNMISD*LSFFLR
Trigger: GCGCAAGAAGAAACTCAGCAAGTCAGATATCATGTT...GTAAGGTGATCTGAAATGAATGCAGAACTCTAACGGTGCAACTTTGAGATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8
CDS-3UTR CAA 90 bp AAAGTTAAACAATCTATTGCTTACTGGTACACGCGACTGAAAACAGTGATAAACAACATGATATCTGACTaGCTGAGTTTCTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: KVKQSIAYWYTRLKTVINNMISD*LSFFLR
Trigger: GCGCAAGAAGAAACTCAGCAAGTCAGATATCATGTT...GTTTATCACTGTTTTCAGTCGCGTGTACCAGTAAGCAATAGATTGTTTAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS CCA 72 bp GCCGGGTTCGGCAGAGCGCGGCAGCACCTCGCGGGCTaGAGTCCCGTTGCGCCCCGGAAGGGGCGCCACGAT +
Preference number: 6 (lower is better)
Translates to: AGFGRARQHLAG*SPVAPRKGRHD
Trigger: ATCGTGGCGCCCCTTCCGGGGCGCAACGGGACTCCAGCCCGCGAGGTGCTGCCGCGCTCTGCCGAACCCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 72 bp CACCAGCTCATAAGGCCGCTGGGGGTCGCGCTTGGCTaGGACCCGGCGCGCGGTGCGGAGCTCTCCGGTGCG +
Preference number: 6 (lower is better)
Translates to: HQLIRPLGVALG*DPARGAELSGA
Trigger: CGCACCGGAGAGCTCCGCACCGCGCGCCGGGTCCCAGCCAAGCGCGACCCCCAGCGGCCTTATGAGCTGGTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 72 bp GCTGGGGGTCGCGCTTGGCTGGGACCCGGCGCGCGGTaGGGAGCTCTCCGGTGCGCCAGTCCAGTCGAAAGA +
Preference number: 6 (lower is better)
Translates to: AGGRAWLGPGAR*GALRCASPVER
Trigger: TCTTTCGACTGGACTGGCGCACCGGAGAGCTCCGCACCGCGCGCCGGGTCCCAGCCAAGCGCGACCCCCAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 72 bp CGATCACCAGCTCATAAGGCCGCTGGGGGTCGCGCTTaGCTGGGACCCGGCGCGCGGTGCGGAGCTCTCCGG +
Preference number: 6 (lower is better)
Translates to: RSPAHKAAGGRA*LGPGARCGALR
Trigger: CCGGAGAGCTCCGCACCGCGCGCCGGGTCCCAGCCAAGCGCGACCCCCAGCGGCCTTATGAGCTGGTGATCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 72 bp CATAGTCCAGCTCGCCGCTCACCTCCAGCCGGCCGGTaGGCGGCGACAGTCCGAAGAGCTCCCGAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: HSPARRSPPAGR*AATVRRAPEPW
Trigger: CCAGGGCTCGGGAGCTCTTCGGACTGTCGCCGCGCACCGGCCGGCTGGAGGTGAGCGGCGAGCTGGACTATG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 72 bp CCGCTCCATCCACCAGCTGAACCACCAGGGTGGCTGTaGAGGACAGGGGCGGCTGCCCGTGGTCGCGCACCT +
Preference number: 6 (lower is better)
Translates to: PLHPPAEPPGWL*RTGAAARGRAP
Trigger: AGGTGCGCGACCACGGGCAGCCGCCCCTGTCCTCCACAGCCACCCTGGTGGTTCAGCTGGTGGATGGAGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 72 bp TCTTCTTGCGCGCCCGGGCTTGGCGGCCGCAGCAGGTaGAGCTCCCATTGCCGCAGCAGCAGCAGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: SSCAPGLGGRSR*SSHCRSSSSRG
Trigger: GCCTCTGCTGCTGCTGCTGCGGCAATGGGAGCTCCACCTGCTGCGGCCGCCAAGCCCGGGCGCGCAAGAAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS TCA 72 bp CCTGCCCGTTCTCCTCTGAGTCCCGATCGGTCACGCTaGACAGAGCCACCACCGTGCCAGGGGCCGCACCCT +
Preference number: 6 (lower is better)
Translates to: PARSPLSPDRSR*TEPPPCQGPHP
Trigger: AGGGTGCGGCCCCTGGCACGGTGGTGGCTCTGTTCAGCGTGACCGATCGGGACTCAGAGGAGAACGGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 72 bp TGGGAACCGAAGCCTCCGGACTCCTCTACCGGCACCTaGGCCGGGTTGCTAGGGACGTTGGCGCTCTGCACC +
Preference number: 6 (lower is better)
Translates to: WEPKPPDSSTGT*AGLLGTLALCT
Trigger: GGTGCAGAGCGCCAACGTCCCTAGCAACCCGGCCCAGGTGCCGGTAGAGGAGTCCGGAGGCTTCGGTTCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 72 bp TGGCTGGGACCCGGCGCGCGGTGCGGAGCTCTCCGGTaGGCCAGTCCAGTCGAAAGAGGTTCATTTCGTTGC +
Preference number: 6 (lower is better)
Translates to: WLGPGARCGALR*ASPVERGSFRC
Trigger: GCAACGAAATGAACCTCTTTCGACTGGACTGGCGCACCGGAGAGCTCCGCACCGCGCGCCGGGTCCCAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 72 bp TCTGACTTGCTGAGTTTCTTCTTGCGCGCCCGGGCTTaGCGGCCGCAGCAGGTGGAGCTCCCATTGCCGCAG +
Preference number: 6 (lower is better)
Translates to: SDLLSFFLRARA*RPQQVELPLPQ
Trigger: CTGCGGCAATGGGAGCTCCACCTGCTGCGGCCGCCAAGCCCGGGCGCGCAAGAAGAAACTCAGCAAGTCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS TCA 72 bp CTCCAAGGGAAAGCGGGTGCCTGGCGTGGCGCTCTCTaGGATCTCCACTGTCAGGTCGGGCTCTGGGAAGGA +
Preference number: 6 (lower is better)
Translates to: LQGKAGAWRGAL*DLHCQVGLWEG
Trigger: TCCTTCCCAGAGCCCGACCTGACAGTGGAGATCTCAGAGAGCGCCACGCCAGGCACCCGCTTTCCCTTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 72 bp CGTCTGGGTCGAAGGCGCTCTCCAAGGGAAAGCGGGTaGCTGGCGTGGCGCTCTCTGAGATCTCCACTGTCA +
Preference number: 6 (lower is better)
Translates to: RLGRRRSPRESG*LAWRSLRSPLS
Trigger: TGACAGTGGAGATCTCAGAGAGCGCCACGCCAGGCACCCGCTTTCCCTTGGAGAGCGCCTTCGACCCAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CAA 90 bp TCTGGTTGCTGGTCGCTGTACCCGGTGACGATGGCTCCGCAGGGATaGTGCTCAGCATCTGTACTCCGGGAAGGGCTGCAGGGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: SGCWSLYPVTMAPQG*CSASVLREGLQGFR
Trigger: CCTGAAGCCCTGCAGCCCTTCCCGGAGTACAGATGCTGAGCACAATCCCTGCGGAGCCATCGTCACCGGGTACAGCGACCAGCAACCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS TCA 72 bp GCGCGGCGACAGTCCGAAGAGCTCCCGAGCCCTGGGTaGAATGTGACTACTGAACGAGTACACGACCTCGCC +
Preference number: 6 (lower is better)
Translates to: ARRQSEELPSPG*NVTTERVHDLA
Trigger: GGCGAGGTCGTGTACTCGTTCAGTAGTCACATTTCACCCAGGGCTCGGGAGCTCTTCGGACTGTCGCCGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS TCA 72 bp CGGGGGCGTTGTCGTTCTGATCCACTATCAAGATGTTaGCCGTGGCATTGCCGGCCAGCGCCTGGGGACTGC +
Preference number: 6 (lower is better)
Translates to: RGRCRSDPLSRC*PWHCRPAPGDC
Trigger: GCAGTCCCCAGGCGCTGGCCGGCAATGCCACGGTCAACATCTTGATAGTGGATCAGAACGACAACGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS TCA 72 bp GCCCAGGGCGATGATAAGGATAAGTGTGAGGTCCAGTaGAGTTTCCCCGCCGCCAGAGCGGCTGGGACGCAG +
Preference number: 6 (lower is better)
Translates to: AQGDDKDKCEVQ*SFPAARAAGTQ
Trigger: CTGCGTCCCAGCCGCTCTGGCGGCGGGGAAACTTCACTGGACCTCACACTTATCCTTATCATCGCCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 72 bp TTGAGGCGGAACGGCACGTCTCCCAGAAGCTCACACTaGACCTGCCCGTTCTCCTCTGAGTCCCGATCGGTC +
Preference number: 6 (lower is better)
Translates to: LRRNGTSPRSSH*TCPFSSESRSV
Trigger: GACCGATCGGGACTCAGAGGAGAACGGGCAGGTGCAGTGTGAGCTTCTGGGAGACGTGCCGTTCCGCCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 72 bp CCTTCCTCTCCAGGGTGCCATGCAGGGCCTTCTCTTTaGCGAAAGTGGAGAAGGAGCGCTCTGCCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: PSSPGCHAGPSL*RKWRRSALPQA
Trigger: AGCCTGGGGCAGAGCGCTCCTTCTCCACTTTCGGCAAAGAGAAGGCCCTGCATGGCACCCTGGAGAGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS CAA 72 bp AAGCCTCCGGACTCCTCTACCGGCACCTGGGCCGGGTaGCTAGGGACGTTGGCGCTCTGCACCAACATGATA +
Preference number: 6 (lower is better)
Translates to: KPPDSSTGTWAG*LGTLALCTNMI
Trigger: TATCATGTTGGTGCAGAGCGCCAACGTCCCTAGCAACCCGGCCCAGGTGCCGGTAGAGGAGTCCGGAGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CAA 72 bp TGGTCGCTGTACCCGGTGACGATGGCTCCGCAGGGATaGTGCTCAGCATCTGTACTCCGGGAAGGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: WSLYPVTMAPQG*CSASVLREGLQ
Trigger: CTGCAGCCCTTCCCGGAGTACAGATGCTGAGCACAATCCCTGCGGAGCCATCGTCACCGGGTACAGCGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CAA 72 bp TCCTTCCTCTCCAGGGTGCCATGCAGGGCCTTCTCTTaGCCGAAAGTGGAGAAGGAGCGCTCTGCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: SFLSRVPCRAFS*PKVEKERSAPG
Trigger: GCCTGGGGCAGAGCGCTCCTTCTCCACTTTCGGCAAAGAGAAGGCCCTGCATGGCACCCTGGAGAGGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS CAA 90 bp GGGTTGCTAGGGACGTTGGCGCTCTGCACCAACATGATATCTGACTaGCTGAGTTTCTTCTTGCGCGCCCGGGCTTGGCGGCCGCAGCAG +
Preference number: 6 (lower is better)
Translates to: GLLGTLALCTNMISD*LSFFLRARAWRPQQ
Trigger: CTGCTGCGGCCGCCAAGCCCGGGCGCGCAAGAAGAAACTCAGCAAGTCAGATATCATGTTGGTGCAGAGCGCCAACGTCCCTAGCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CAA 90 bp TGGGAACCGAAGCCTCCGGACTCCTCTACCGGCACCTGGGCCGGGTaGCTAGGGACGTTGGCGCTCTGCACCAACATGATATCTGACTTG +
Preference number: 6 (lower is better)
Translates to: WEPKPPDSSTGTWAG*LGTLALCTNMISDL
Trigger: CAAGTCAGATATCATGTTGGTGCAGAGCGCCAACGTCCCTAGCAACCCGGCCCAGGTGCCGGTAGAGGAGTCCGGAGGCTTCGGTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CAA 90 bp CCGTCCAACTCCTTCCTCTCCAGGGTGCCATGCAGGGCCTTCTCTTaGCCGAAAGTGGAGAAGGAGCGCTCTGCCCCAGGCTGGACTTCT +
Preference number: 6 (lower is better)
Translates to: PSNSFLSRVPCRAFS*PKVEKERSAPGWTS
Trigger: AGAAGTCCAGCCTGGGGCAGAGCGCTCCTTCTCCACTTTCGGCAAAGAGAAGGCCCTGCATGGCACCCTGGAGAGGAAGGAGTTGGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS TCA 72 bp GGAAGGGGCGCCACGATGGCGGGGGCGTTGTCGTTCTaGTCCACTATCAAGATGTTGACCGTGGCATTGCCG +
Preference number: 6 (lower is better)
Translates to: GRGATMAGALSF*STIKMLTVALP
Trigger: CGGCAATGCCACGGTCAACATCTTGATAGTGGATCAGAACGACAACGCCCCCGCCATCGTGGCGCCCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS TCA 72 bp AGAGGTTCATTTCGTTGCCCCGCACTATGCTGTAGGTaGGCCTGGCGTTCTCGCCGTCGTCCGCGTCCACTG +
Preference number: 6 (lower is better)
Translates to: RGSFRCPALCCR*AWRSRRRPRPL
Trigger: CAGTGGACGCGGACGACGGCGAGAACGCCAGGCTCACCTACAGCATAGTGCGGGGCAACGAAATGAACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 72 bp CTGGAACAGAGTCCATGCCGGGGACATGCAGGTTGCTaGGGTAATCTGCAGCCTGGCGTCCATCCGAAGGGA +
Preference number: 6 (lower is better)
Translates to: LEQSPCRGHAGC*GNLQPGVHPKG
Trigger: TCCCTTCGGATGGACGCCAGGCTGCAGATTACCGCAGCAACCTGCATGTCCCCGGCATGGACTCTGTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS CCA 72 bp TATCTCGTAGTCTCGCAAGGAGTTGGTCCCCACGTCTaGGTCGAAGGCGCTCTCCAAGGGAAAGCGGGTGCC +
Preference number: 6 (lower is better)
Translates to: YLVVSQGVGPHV*VEGALQGKAGA
Trigger: GGCACCCGCTTTCCCTTGGAGAGCGCCTTCGACCCAGACGTGGGGACCAACTCCTTGCGAGACTACGAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 72 bp TCACATCTGACACTTGAACCTGGATCGACTTACTGGTaGAGAGTGCAGGCTCGCCCCGGTCGCGGGCCACCA +
Preference number: 6 (lower is better)
Translates to: SHLTLEPGSTYW*RVQARPGRGPP
Trigger: TGGTGGCCCGCGACCGGGGCGAGCCTGCACTCTCCACCAGTAAGTCGATCCAGGTTCAAGTGTCAGATGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 72 bp AGGGATTGTGCTCAGCATCTGTACTCCGGGAAGGGCTaGAGGGCTTCAGGAACATCAGGTCGGTCTTGGCGG +
Preference number: 6 (lower is better)
Translates to: RDCAQHLYSGKG*RASGTSGRSWR
Trigger: CCGCCAAGACCGACCTGATGTTCCTGAAGCCCTGCAGCCCTTCCCGGAGTACAGATGCTGAGCACAATCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 72 bp GTCCATGCCGGGGACATGCAGGTTGCTGCGGTAATCTaGAGCCTGGCGTCCATCCGAAGGGACAAAAGAAGG +
Preference number: 6 (lower is better)
Translates to: VHAGDMQVAAVI*SLASIRRDKRR
Trigger: CCTTCTTTTGTCCCTTCGGATGGACGCCAGGCTGCAGATTACCGCAGCAACCTGCATGTCCCCGGCATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS GCA 72 bp TGTCTGGAACAGAGTCCATGCCGGGGACATGCAGGTTaGTGCGGTAATCTGCAGCCTGGCGTCCATCCGAAG +
Preference number: 6 (lower is better)
Translates to: CLEQSPCRGHAG*CGNLQPGVHPK
Trigger: CTTCGGATGGACGCCAGGCTGCAGATTACCGCAGCAACCTGCATGTCCCCGGCATGGACTCTGTTCCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS CCA 72 bp CATTCACATCTGACACTTGAACCTGGATCGACTTACTaGTGGAGAGTGCAGGCTCGCCCCGGTCGCGGGCCA +
Preference number: 6 (lower is better)
Translates to: HSHLTLEPGSTY*WRVQARPGRGP
Trigger: TGGCCCGCGACCGGGGCGAGCCTGCACTCTCCACCAGTAAGTCGATCCAGGTTCAAGTGTCAGATGTGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CAA 72 bp TGCACCAACATGATATCTGACTTGCTGAGTTTCTTCTaGCGCGCCCGGGCTTGGCGGCCGCAGCAGGTGGAG +
Preference number: 6 (lower is better)
Translates to: CTNMISDLLSFF*RARAWRPQQVE
Trigger: CTCCACCTGCTGCGGCCGCCAAGCCCGGGCGCGCAAGAAGAAACTCAGCAAGTCAGATATCATGTTGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CAA 72 bp TCCTCTACCGGCACCTGGGCCGGGTTGCTAGGGACGTaGGCGCTCTGCACCAACATGATATCTGACTTGCTG +
Preference number: 6 (lower is better)
Translates to: SSTGTWAGLLGT*ALCTNMISDLL
Trigger: CAGCAAGTCAGATATCATGTTGGTGCAGAGCGCCAACGTCCCTAGCAACCCGGCCCAGGTGCCGGTAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 72 bp CCAGTGGCTTCTCCAGGACCAGTTCGGCGAATCGGTTaGCATCTCCCTGGGTCTGTACGTCTAGCGAGAAGT +
Preference number: 6 (lower is better)
Translates to: PVASPGPVRRIG*HLPGSVRLARS
Trigger: ACTTCTCGCTAGACGTACAGACCCAGGGAGATGGCAACCGATTCGCCGAACTGGTCCTGGAGAAGCCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 72 bp GGCCTTCTCTTTGCCGAAAGTGGAGAAGGAGCGCTCTaGCCCAGGCTGGACTTCTGGAGGTTCAAAGACCTC +
Preference number: 6 (lower is better)
Translates to: GLLFAESGEGAL*PRLDFWRFKDL
Trigger: GAGGTCTTTGAACCTCCAGAAGTCCAGCCTGGGGCAGAGCGCTCCTTCTCCACTTTCGGCAAAGAGAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS CCA 72 bp AGGTTAATTTTGCATTGGCCCCTTCGTCGCGGTCCGTaGCGCTCACCGCGTAAATGTAGGCACCCGGCACAT +
Preference number: 6 (lower is better)
Translates to: RLILHWPLRRGP*RSPRKCRHPAH
Trigger: ATGTGCCGGGTGCCTACATTTACGCGGTGAGCGCCACGGACCGCGACGAAGGGGCCAATGCAAAATTAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 72 bp AGTGGAGAAGGAGCGCTCTGCCCCAGGCTGGACTTCTaGAGGTTCAAAGACCTCGGTGTCTGGAACAGAGTC +
Preference number: 6 (lower is better)
Translates to: SGEGALCPRLDF*RFKDLGVWNRV
Trigger: GACTCTGTTCCAGACACCGAGGTCTTTGAACCTCCAGAAGTCCAGCCTGGGGCAGAGCGCTCCTTCTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS CCA 72 bp TTGCCGAAAGTGGAGAAGGAGCGCTCTGCCCCAGGCTaGACTTCTGGAGGTTCAAAGACCTCGGTGTCTGGA +
Preference number: 6 (lower is better)
Translates to: LPKVEKERSAPG*TSGGSKTSVSG
Trigger: TCCAGACACCGAGGTCTTTGAACCTCCAGAAGTCCAGCCTGGGGCAGAGCGCTCCTTCTCCACTTTCGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS CAA 72 bp TCCAGTGGCTTCTCCAGGACCAGTTCGGCGAATCGGTaGCCATCTCCCTGGGTCTGTACGTCTAGCGAGAAG +
Preference number: 6 (lower is better)
Translates to: SSGFSRTSSANR*PSPWVCTSSEK
Trigger: CTTCTCGCTAGACGTACAGACCCAGGGAGATGGCAACCGATTCGCCGAACTGGTCCTGGAGAAGCCACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS TCA 72 bp GACAGTCCGAAGAGCTCCCGAGCCCTGGGTGAAATGTaGCTACTGAACGAGTACACGACCTCGCCATTCTGG +
Preference number: 6 (lower is better)
Translates to: DSPKSSRALGEM*LLNEYTTSPFW
Trigger: CCAGAATGGCGAGGTCGTGTACTCGTTCAGTAGTCACATTTCACCCAGGGCTCGGGAGCTCTTCGGACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 72 bp GGCACCTGGGCCGGGTTGCTAGGGACGTTGGCGCTCTaGACCAACATGATATCTGACTTGCTGAGTTTCTTC +
Preference number: 6 (lower is better)
Translates to: GTWAGLLGTLAL*TNMISDLLSFF
Trigger: GAAGAAACTCAGCAAGTCAGATATCATGTTGGTGCAGAGCGCCAACGTCCCTAGCAACCCGGCCCAGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 72 bp GAGGTTCAAAGACCTCGGTGTCTGGAACAGAGTCCATaGCGGGGACATGCAGGTTGCTGCGGTAATCTGCAG +
Preference number: 6 (lower is better)
Translates to: EVQRPRCLEQSP*RGHAGCCGNLQ
Trigger: CTGCAGATTACCGCAGCAACCTGCATGTCCCCGGCATGGACTCTGTTCCAGACACCGAGGTCTTTGAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS GCA 72 bp AGCAATCCGTCCAACTCCTTCCTCTCCAGGGTGCCATaGAGGGCCTTCTCTTTGCCGAAAGTGGAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: SNPSNSFLSRVP*RAFSLPKVEKE
Trigger: CTCCTTCTCCACTTTCGGCAAAGAGAAGGCCCTGCATGGCACCCTGGAGAGGAAGGAGTTGGACGGATTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS CCA 72 bp AGCTATTTGGGGTTATCTCGTAGTCTCGCAAGGAGTTaGTCCCCACGTCTGGGTCGAAGGCGCTCTCCAAGG +
Preference number: 6 (lower is better)
Translates to: SYLGLSRSLARS*SPRLGRRRSPR
Trigger: CCTTGGAGAGCGCCTTCGACCCAGACGTGGGGACCAACTCCTTGCGAGACTACGAGATAACCCCAAATAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 72 bp AGGCTGGACTTCTGGAGGTTCAAAGACCTCGGTGTCTaGAACAGAGTCCATGCCGGGGACATGCAGGTTGCT +
Preference number: 6 (lower is better)
Translates to: RLDFWRFKDLGV*NRVHAGDMQVA
Trigger: AGCAACCTGCATGTCCCCGGCATGGACTCTGTTCCAGACACCGAGGTCTTTGAACCTCCAGAAGTCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS TCA 72 bp TCTTCTCGTTTACGTACAGAACCCCGGTCTCCAGATTaGGGTCCAAGTAAGGGGTCCGTGAGTTGGCCACCG +
Preference number: 6 (lower is better)
Translates to: SSRLRTEPRSPD*GPSKGSVSWPP
Trigger: CGGTGGCCAACTCACGGACCCCTTACTTGGACCTCAATCTGGAGACCGGGGTTCTGTACGTAAACGAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 72 bp CACCGCCTCTTTCACTGTGCTGAAGCTGATCTCTGGTaGGTTGTCGTTGGCATCCAGCACTCTCACCAGAAC +
Preference number: 6 (lower is better)
Translates to: HRLFHCAEADLW*VVVGIQHSHQN
Trigger: GTTCTGGTGAGAGTGCTGGATGCCAACGACAACGCACCAGAGATCAGCTTCAGCACAGTGAAAGAGGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 72 bp CCATTCTGGCCTTCATCAGGGTCGGTGGCATTAAGCTaGATCACTAGCGTGCCAGGGGGAGAATTCTCTGGT +
Preference number: 6 (lower is better)
Translates to: PFWPSSGSVALS*ITSVPGGEFSG
Trigger: ACCAGAGAATTCTCCCCCTGGCACGCTAGTGATCCAGCTTAATGCCACCGACCCTGATGAAGGCCAGAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 72 bp ACCCAAGTCCTTGGCTTGGACATACACCTGATACACTaGGCTCTCTTCATAGTCCAGCTCGCCGCTCACCTC +
Preference number: 6 (lower is better)
Translates to: TQVLGLDIHLIH*ALFIVQLAAHL
Trigger: GAGGTGAGCGGCGAGCTGGACTATGAAGAGAGCCCAGTGTATCAGGTGTATGTCCAAGCCAAGGACTTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 72 bp GACAAAATGCTTCCGTTGGAAATGATGTCTGGTTGCTaGTCGCTGTACCCGGTGACGATGGCTCCGCAGGGA +
Preference number: 6 (lower is better)
Translates to: DKMLPLEMMSGC*SLYPVTMAPQG
Trigger: TCCCTGCGGAGCCATCGTCACCGGGTACAGCGACCAGCAACCAGACATCATTTCCAACGGAAGCATTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CAA 90 bp CCTTACCTCGTTGGACAAAATGCTTCCGTTGGAAATGATGTCTGGTaGCTGGTCGCTGTACCCGGTGACGATGGCTCCGCAGGGATTGTG +
Preference number: 6 (lower is better)
Translates to: PYLVGQNASVGNDVW*LVAVPGDDGSAGIV
Trigger: CACAATCCCTGCGGAGCCATCGTCACCGGGTACAGCGACCAGCAACCAGACATCATTTCCAACGGAAGCATTTTGTCCAACGAGGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS TCA 72 bp TCAGGAACATCAGGTCGGTCTTGGCGGACTCCGGGGTaGGGCAGACCTGATAGCAATAGTTCTGATTGTGGT +
Preference number: 6 (lower is better)
Translates to: SGTSGRSWRTPG*GRPDSNSSDCG
Trigger: ACCACAATCAGAACTATTGCTATCAGGTCTGCCTCACCCCGGAGTCCGCCAAGACCGACCTGATGTTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS GCA 72 bp TTGGACAAAATGCTTCCGTTGGAAATGATGTCTGGTTaGTGGTCGCTGTACCCGGTGACGATGGCTCCGCAG +
Preference number: 6 (lower is better)
Translates to: LDKMLPLEMMSG*WSLYPVTMAPQ
Trigger: CTGCGGAGCCATCGTCACCGGGTACAGCGACCAGCAACCAGACATCATTTCCAACGGAAGCATTTTGTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CCA 72 bp CTCGTTGGACAAAATGCTTCCGTTGGAAATGATGTCTaGTTGCTGGTCGCTGTACCCGGTGACGATGGCTCC +
Preference number: 6 (lower is better)
Translates to: LVGQNASVGNDV*LLVAVPGDDGS
Trigger: GGAGCCATCGTCACCGGGTACAGCGACCAGCAACCAGACATCATTTCCAACGGAAGCATTTTGTCCAACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CAA 72 bp GTTGGACAAAATGCTTCCGTTGGAAATGATGTCTGGTaGCTGGTCGCTGTACCCGGTGACGATGGCTCCGCA +
Preference number: 6 (lower is better)
Translates to: VGQNASVGNDVW*LVAVPGDDGSA
Trigger: TGCGGAGCCATCGTCACCGGGTACAGCGACCAGCAACCAGACATCATTTCCAACGGAAGCATTTTGTCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CAA 72 bp TCAGAGTGGCCCAGTGCTTTACATTCCTCGGTGCAGTaGGAGAAAAGATCCATACCAGCTGACTGGCCACGG +
Preference number: 6 (lower is better)
Translates to: SEWPSALHSSVQ*EKRSIPADWPR
Trigger: CCGTGGCCAGTCAGCTGGTATGGATCTTTTCTCCAACTGCACCGAGGAATGTAAAGCACTGGGCCACTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS CAA 72 bp CTCCCTGGGTCTGTACGTCTAGCGAGAAGTAGCTATTaGGGGTTATCTCGTAGTCTCGCAAGGAGTTGGTCC +
Preference number: 6 (lower is better)
Translates to: LPGSVRLARSSY*GLSRSLARSWS
Trigger: GGACCAACTCCTTGCGAGACTACGAGATAACCCCAAATAGCTACTTCTCGCTAGACGTACAGACCCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CAA 90 bp AAAGACCTCCAGGTGCAGGACACAAGAGGGGCTCTGCTTACAGATTaGCTCGCGATCTATCTTCTCGTTTACGTACAGAACCCCGGTCTC +
Preference number: 6 (lower is better)
Translates to: KDLQVQDTRGALLTD*LAIYLLVYVQNPGL
Trigger: GAGACCGGGGTTCTGTACGTAAACGAGAAGATAGATCGCGAGCAAATCTGTAAGCAGAGCCCCTCTTGTGTCCTGCACCTGGAGGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CAA 90 bp TTTATTCTCGTTGGACAAAATGCTTCCGTTGGAAATGATGTCTGGTaGCTGGTCGCTGTACCCGGTGACGATGGCTCCGCAGGGATTGTG +
Preference number: 6 (lower is better)
Translates to: FILVGQNASVGNDVW*LVAVPGDDGSAGIV
Trigger: CACAATCCCTGCGGAGCCATCGTCACCGGGTACAGCGACCAGCAACCAGACATCATTTCCAACGGAAGCATTTTGTCCAACGAGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS CAA 90 bp AGCTCTGCTCGCTGGTGTTTATTCTCGTTGGACAAAATGCTTCCGTaGGAAATGATGTCTGGTTGCTGGTCGCTGTACCCGGTGACGATG +
Preference number: 6 (lower is better)
Translates to: SSARWCLFSLDKMLP*EMMSGCWSLYPVTM
Trigger: CATCGTCACCGGGTACAGCGACCAGCAACCAGACATCATTTCCAACGGAAGCATTTTGTCCAACGAGAATAAACACCAGCGAGCAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS CAA 90 bp TGCTTCTTTCCCTTCAGCCTTACCTCGTTGGACAAAATGCTTCCGTaGGAAATGATGTCTGGTTGCTGGTCGCTGTACCCGGTGACGATG +
Preference number: 6 (lower is better)
Translates to: CFFPFSLTSLDKMLP*EMMSGCWSLYPVTM
Trigger: CATCGTCACCGGGTACAGCGACCAGCAACCAGACATCATTTCCAACGGAAGCATTTTGTCCAACGAGGTAAGGCTGAAGGGAAAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS CAA 90 bp GGAGGAGATGAGAGATGGTGCTTCTTTCCCTTCAGCCTTACCTCGTaGGACAAAATGCTTCCGTTGGAAATGATGTCTGGTTGCTGGTCG +
Preference number: 6 (lower is better)
Translates to: GGDERWCFFPFSLTS*DKMLPLEMMSGCWS
Trigger: CGACCAGCAACCAGACATCATTTCCAACGGAAGCATTTTGTCCAACGAGGTAAGGCTGAAGGGAAAGAAGCACCATCTCTCATCTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS TCA 72 bp AGAAAAGATCCATACCAGCTGACTGGCCACGGTTGGTaGCATCATGATCACTGTCTCCCTGTTCACTGTCTC +
Preference number: 6 (lower is better)
Translates to: RKDPYQLTGHGW*HHDHCLPVHCL
Trigger: GAGACAGTGAACAGGGAGACAGTGATCATGATGTCACCAACCGTGGCCAGTCAGCTGGTATGGATCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
CDS GCA 72 bp AGAAAGACCTCCAGGTGCAGGACACAAGAGGGGCTCTaGTTACAGATTTGCTCGCGATCTATCTTCTCGTTT +
Preference number: 6 (lower is better)
Translates to: RKTSRCRTQEGL*LQICSRSIFSF
Trigger: AAACGAGAAGATAGATCGCGAGCAAATCTGTAAGCAGAGCCCCTCTTGTGTCCTGCACCTGGAGGTCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS CAA 72 bp CAGGTGCAGGACACAAGAGGGGCTCTGCTTACAGATTaGCTCGCGATCTATCTTCTCGTTTACGTACAGAAC +
Preference number: 6 (lower is better)
Translates to: QVQDTRGALLTD*LAIYLLVYVQN
Trigger: GTTCTGTACGTAAACGAGAAGATAGATCGCGAGCAAATCTGTAAGCAGAGCCCCTCTTGTGTCCTGCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166126.7
ENSMUST00000170695.4
ENSMUST00000171554.8
ENSMUST00000193252.2
CDS TCA 72 bp CATGTGGTTGTTTGCTTGCCTCCATCTTTCGTTAAATaGGCCTCTCCACGCAGCTGCATCCACAGCATTTTC +
Preference number: 6 (lower is better)
Translates to: HVVVCLPPSFVK*ASPRSCIHSIF
Trigger: GAAAATGCTGTGGATGCAGCTGCGTGGAGAGGCTCATTTAACGAAAGATGGAGGCAAGCAAACAACCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS CCA 72 bp TCCACGCAGCTGCATCCACAGCATTTTCAAATATGGTaGTTTGTAAGGCGCTCGTGTATTAGACAGCAATCC +
Preference number: 6 (lower is better)
Translates to: STQLHPQHFQIW*FVRRSCIRQQS
Trigger: GGATTGCTGTCTAATACACGAGCGCCTTACAAACCACCATATTTGAAAATGCTGTGGATGCAGCTGCGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166126.7
CDS CAA 72 bp GAGAGATGGTGCTTCTTTCCCTTCAGCCTTACCTCGTaGGACAAAATGCTTCCGTTGGAAATGATGTCTGGT +
Preference number: 6 (lower is better)
Translates to: ERWCFFPFSLTS*DKMLPLEMMSG
Trigger: ACCAGACATCATTTCCAACGGAAGCATTTTGTCCAACGAGGTAAGGCTGAAGGGAAAGAAGCACCATCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193252.2
CDS CCA 72 bp AAAACAAGAAAGAGGGTGGAAATGATTCAAATATGGTaGTTTGTAAGGCGCTCGTGTATTAGACAGCAATCC +
Preference number: 6 (lower is better)
Translates to: KTRKRVEMIQIW*FVRRSCIRQQS
Trigger: GGATTGCTGTCTAATACACGAGCGCCTTACAAACCACCATATTTGAATCATTTCCACCCTCTTTCTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000171554.8