Pregenerated sensors for PCCB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032527Ensembl transcript IDs: ENSMUST00000035116.12, ENSMUST00000142676.8, ENSMUST00000149322.8, ENSMUST00000189498.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCACAGCATCTCCCACTATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCCCCAAGAACTCTTTATaGAAATCAATCAGTGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: PQHLPLSLCSHYPTRSSSPKNSL*KSISVQ Trigger: TTGGACACTGATTGATTTGCATAAAGAGTTCTTGGG...GCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGATAGTGGGAGATGCTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| 3UTR-3UTR GCA 90 bp | CACAAAAATCATACCCACATCAGTGTGAACCAGAGCCTGATTCAGTCAACTATGCAGCTTTTCAACTGTTaGTCTAGTCCCTTCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: HKNHTHISVNQSLIQSTMQLFNC*SSPFHL Trigger: CAGATGGAAGGGACTAGAGCAACAGTTGAAAAGCTG...CATAGTTGACTGAATCAGGCTCTGGTTCACACTGATGTGGGTATGATTTTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACATAGACAGCTTTTCAACTGTTaGTCTAGTCCCTTCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: TPGPRTLYANQSVSKIHRQLFNC*SSPFHL Trigger: CAGATGGAAGGGACTAGAGCAACAGTTGAAAAGCTG...TCTATGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| 3UTR-3UTR GCA 90 bp | CACAAAAATCATACCCACATCAGTGTGAACCAGAGCCTGATTCAGTCAACTATGCCCAAGAACTCTTTATaGAAATCAATCAGTGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: HKNHTHISVNQSLIQSTMPKNSL*KSISVQ Trigger: TTGGACACTGATTGATTTGCATAAAGAGTTCTTGGG...CATAGTTGACTGAATCAGGCTCTGGTTCACACTGATGTGGGTATGATTTTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | CCACAGCATCTCCCACTATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCCGCCCCCGGAGTCATTaGGCCCGATCACTGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PQHLPLSLCSHYPTRSSSRPRSH*ARSLEP Trigger: GGGCTCCAGTGATCGGGCTCAATGACTCCGGGGGCG...GCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGATAGTGGGAGATGCTGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | CAGCTGACCACAGCATCTCCCACTATCTCTCTGCTCTCACTACCCCACACGGAGCGCAATTCAGAACGCTaGGCCTCGCTCCAGCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLTTASPTISLLSLPHTERNSER*ASLQPP Trigger: TGGCGGCTGGAGCGAGGCTCAGCGTTCTGAATTGCG...CTCCGTGTGGGGTAGTGAGAGCAGAGAGATAGTGGGAGATGCTGTGGTCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR GCA 90 bp | ATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCTCCAGCATGTCGACCTCCATACTCCTGCGCCGTaGCAGGCAGGAAGCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISLLSLPHTEFKLQHVDLHTPAP*QAGSQG Trigger: TCCCTGGCTTCCTGCCTGGCACGGCGCAGGAGTATG...GAGGTCGACATGCTGGAGCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | ATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCTCCAGCATGTCGACCTCATGGGAGCCGGGTCCTaGCTGCTGAGGGGCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISLLSLPHTEFKLQHVDLMGAGS*LLRGRK Trigger: TTTCCTGCCCCTCAGCAGCCAGGACCCGGCTCCCAT...GAGGTCGACATGCTGGAGCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR GCA 90 bp | AGCATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACCAGTGTGCTGCGCGTCGATaGGGCGCTGGCCTCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SMSTSEGHKNHTHISVNQCAARR*GAGLLP Trigger: TGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCACA...CTGGTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACATGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | ATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACCAGAGCGACTCCACCCCCTCCTaGATTCTGGCGCCCCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MSTSEGHKNHTHISVNQSDSTPS*ILAPPE Trigger: CTCCGGGGGCGCCAGAATCCAGGAGGGGGTGGAGTC...GCTCTGGTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | CAGCTGACCACAGCATCTCCCACTATCTCTCTGCTCTCACTACCCCACACGGAGTTCCTCCAGGGACGATaGACCTTCTTGCTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLTTASPTISLLSLPHTEFLQGR*TFLLAR Trigger: CCTGGCCAGCAAGAAGGTCCATCGTCCCTGGAGGAA...CTCCGTGTGGGGTAGTGAGAGCAGAGAGATAGTGGGAGATGCTGTGGTCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | CCACAGCATCTCCCACTATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCCAGCACACGGGCCCATaGTCAGAGAAATCTGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQHLPLSLCSHYPTRSSSQHTGP*SEKSAG Trigger: TCCCGCAGATTTCTCTGATCATGGGCCCGTGTGCTG...GCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGATAGTGGGAGATGCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035116.12 |
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| CDS-3UTR GCA 90 bp | ATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACCAGAGCTTCCCTCGCTTGTGCTaGGCGTCGATGCGGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MSTSEGHKNHTHISVNQSFPRLC*ASMRRW Trigger: CCAGCGCCGCATCGACGCGCAGCACAAGCGAGGGAA...GCTCTGGTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | CCACAGCATCTCCCACTATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCGAACCAGACGGTCACTaGGGTCATGGCACTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQHLPLSLCSHYPTRSSSEPDGH*GHGTLG Trigger: TCCGAGAGTGCCATGACCCCAGTGACCGTCTGGTTC...GCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGATAGTGGGAGATGCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | CCACAGCATCTCCCACTATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCCCCTCTCACGGCTGCTaGGAAAGGGTTGGCGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: PQHLPLSLCSHYPTRSSSPSHGC*ERVGEL Trigger: AAGTTCGCCAACCCTTTCCCAGCAGCCGTGAGAGGG...GCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGATAGTGGGAGATGCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | ATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCTCCAGCATGTCGACCTCTCTATGGGCCACACCTaGCACAGTGGTGTGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISLLSLPHTEFKLQHVDLSMGHT*HSGVGL Trigger: AAGACCCACACCACTGTGTCAGGTGTGGCCCATAGA...GAGGTCGACATGCTGGAGCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR GCA 90 bp | ATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCTCCAGCATGTCGACCTCAGCAGCTTGGCACCATaGCTGATGATGCCCCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: ISLLSLPHTEFKLQHVDLSSLAP*LMMPPY Trigger: GTATGGGGGCATCATCAGGCATGGTGCCAAGCTGCT...GAGGTCGACATGCTGGAGCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | CCACAGCATCTCCCACTATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCACCCTGAGGCCACATTaGGCTGGTTGCCGACAATTC | + |
|
Preference number: 4 (lower is better) Translates to: PQHLPLSLCSHYPTRSSSTLRPH*AGCRQF Trigger: GAATTGTCGGCAACCAGCCCAATGTGGCCTCAGGGT...GCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGATAGTGGGAGATGCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | ATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCTCCAGCATGTCGACCTCACCCTGAGGCCACATTaGGCTGGTTGCCGACAATTC | + |
|
Preference number: 4 (lower is better) Translates to: ISLLSLPHTEFKLQHVDLTLRPH*AGCRQF Trigger: GAATTGTCGGCAACCAGCCCAATGTGGCCTCAGGGT...GAGGTCGACATGCTGGAGCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | CTGATTCAGTCAACTATGATTCCATCCCCCGCCTCCTTCTGGCTTTCTTGTATACATGGCACTCTCGGATaGGAGCCGGGTCCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LIQSTMIPSPASFWLSCIHGTLG*EPGPGC Trigger: GCAGCCAGGACCCGGCTCCCATCCGAGAGTGCCATG...TATACAAGAAAGCCAGAAGGAGGCGGGGGATGGAATCATAGTTGACTGAATCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | CAGCTGACCACAGCATCTCCCACTATCTCTCTGCTCTCACTACCCCACACGGAGAGCACGAGTAGAGGATaGCTGGATGATGTCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLTTASPTISLLSLPHTESTSRG*LDDVIH Trigger: GTGGATGACATCATCCAGCCATCCTCTACTCGTGCT...CTCCGTGTGGGGTAGTGAGAGCAGAGAGATAGTGGGAGATGCTGTGGTCAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | ATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCTCCAGCATGTCGACCTCTTGAGCATGTGCTCCTaGCAGACTGCCTCCAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: ISLLSLPHTEFKLQHVDLLSMCS*QTASKN Trigger: GTTTTTGGAGGCAGTCTGTCAGGAGCACATGCTCAA...GAGGTCGACATGCTGGAGCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | GCAGCTGGGGAAAGACTAAGAACTCTTAGCCTCTTCAGCACAGAGCCCAGCCCAGGTGTTTGGAGCTCATaGCATCATAGGCACCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: AAGERLRTLSLFSTEPSPGVWSS*HHRHLH Trigger: ATGGAGGTGCCTATGATGTCATGAGCTCCAAACACC...TGGGCTGGGCTCTGTGCTGAAGAGGCTAAGAGTTCTTAGTCTTTCCCCAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | ATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACCAGAGCCACCCTTTGCTCCCATaGCCGCAATCTCAGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: MSTSEGHKNHTHISVNQSHPLLP*PQSQLW Trigger: CCACAGCTGAGATTGCGGTCATGGGAGCAAAGGGTG...GCTCTGGTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR GCA 90 bp | CAGCTGACCACAGCATCTCCCACTATCTCTCTGCTCTCACTACCCCACACGGAGTCACAGTGGGATATTTaGATGTTTCCTCCAGGGACG | + |
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Preference number: 4 (lower is better) Translates to: QLTTASPTISLLSLPHTESQWDI*MFPPGT Trigger: CGTCCCTGGAGGAAACATGCAAATATCCCACTGTGA...CTCCGTGTGGGGTAGTGAGAGCAGAGAGATAGTGGGAGATGCTGTGGTCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | CACAAAAATCATACCCACATCAGTGTGAACCAGAGCCTGATTCAGTCAACTATGGACTCCACCCCCTCCTaGATTCTGGCGCCCCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: HKNHTHISVNQSLIQSTMDSTPS*ILAPPE Trigger: CTCCGGGGGCGCCAGAATCCAGGAGGGGGTGGAGTC...CATAGTTGACTGAATCAGGCTCTGGTTCACACTGATGTGGGTATGATTTTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | AGCATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACCAGCAGTGGTGTGGGTCTTaGCACCACCCAGCTGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SMSTSEGHKNHTHISVNQQWCGS*HHPAAL Trigger: AAGAGCAGCTGGGTGGTGCCAAGACCCACACCACTG...CTGGTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACATGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | ATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACCAGAGCCCACACCTGACACAGTaGTGTGGGTCTTGGCACCAC | + |
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Preference number: 4 (lower is better) Translates to: MSTSEGHKNHTHISVNQSPHLTQ*CGSWHH Trigger: GTGGTGCCAAGACCCACACCACTGTGTCAGGTGTGG...GCTCTGGTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | ATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCTCCAGCATGTCGACCTCCTGCTGGGAAAGGGTTaGCGAACTTCTCCACATACT | + |
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Preference number: 4 (lower is better) Translates to: ISLLSLPHTEFKLQHVDLLLGKG*RTSPHT Trigger: AGTATGTGGAGAAGTTCGCCAACCCTTTCCCAGCAG...GAGGTCGACATGCTGGAGCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | TCCAGCATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACGATCCAGCAGAAGACTaGTCCGCTCCCTGGCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: SSMSTSEGHKNHTHISVNDPAED*SAPWLL Trigger: TAACAGCCAGGGAGCGGATCAGTCTTCTGCTGGATC...GTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACATGCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | CTATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCTCCAGCATGTCGACCGTTGTAGGCTTTGCTTaGCTCCAAAGGGACAACTGT | + |
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Preference number: 4 (lower is better) Translates to: LSLCSHYPTRSSSSSMSTVVGFA*LQRDNC Trigger: ACAGTTGTCCCTTTGGAGTCAAGCAAAGCCTACAAC...GGTCGACATGCTGGAGCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | TCCAGCATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACCCGCAATCTCAGCTGTaGGCCAGGCATAGTTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SSMSTSEGHKNHTHISVNPQSQL*ARHSWC Trigger: ACACCAACTATGCCTGGCCCACAGCTGAGATTGCGG...GTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACATGCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | AGCATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACCAGAGCCCCCTTCACGGATaGATTAATGTCCAAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: SMSTSEGHKNHTHISVNQSPLHG*INVQAP Trigger: GGGTGCTTGGACATTAATTCATCCGTGAAGGGGGCT...CTGGTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR GCA 90 bp | ACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACATAGATTCCCTCGCTTGTGCTaGGCGTCGATGCGGCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TPGPRTLYANQSVSKIHRFPRLC*ASMRRW Trigger: CCAGCGCCGCATCGACGCGCAGCACAAGCGAGGGAA...TCTATGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | GCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCATGGGAGCCGGGTCCTaGCTGCTGAGGGGCAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: AHSFTPGPRTLYANQSVSMGAGS*LLRGRK Trigger: TTTCCTGCCCCTCAGCAGCCAGGACCCGGCTCCCAT...GGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | GATTCAGTCAACTATGATTCCATCCCCCGCCTCCTTCTGGCTTTCTTGTATAAGACATGTCGCTCTCCATaGAGCTGCCAGGATCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: DSVNYDSIPRLLLAFLYKTCRSP*SCQDPA Trigger: TGCTGGATCCTGGCAGCTTCATGGAGAGCGACATGT...CTTATACAAGAAAGCCAGAAGGAGGCGGGGGATGGAATCATAGTTGACTGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | ATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACCAGAGCTTGAGCATGTGCTCCTaGCAGACTGCCTCCAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: MSTSEGHKNHTHISVNQSLSMCS*QTASKN Trigger: GTTTTTGGAGGCAGTCTGTCAGGAGCACATGCTCAA...GCTCTGGTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | AATAGAGCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCACGCCCCCGGAGTCATTaGGCCCGATCACTGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: NRAHSFTPGPRTLYANQSRPRSH*ARSLEP Trigger: GGGCTCCAGTGATCGGGCTCAATGACTCCGGGGGCG...TGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGCTCTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | GATTCAGTCAACTATGATTCCATCCCCCGCCTCCTTCTGGCTTTCTTGTATAAGAATGTCCAAGCACCCTaGGGCCACATTGGGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: DSVNYDSIPRLLLAFLYKNVQAP*GHIGLV Trigger: AACCAGCCCAATGTGGCCTCAGGGTGCTTGGACATT...CTTATACAAGAAAGCCAGAAGGAGGCGGGGGATGGAATCATAGTTGACTGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR GCA 90 bp | AATAGAGCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCATGTGCTGCGCGTCGATaGGGCGCTGGCCTCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: NRAHSFTPGPRTLYANQSCAARR*GAGLLP Trigger: TGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCACA...TGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGCTCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR GCA 90 bp | AGAGCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGCATACTCCTGCGCCGTaGCAGGCAGGAAGCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RAHSFTPGPRTLYANQSVHTPAP*QAGSQG Trigger: TCCCTGGCTTCCTGCCTGGCACGGCGCAGGAGTATG...CACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | TTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACACATGGCACTCTCGGATaGGAGCCGGGTCCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FYSRPKNSLCKSISVQDTHGTLG*EPGPGC Trigger: GCAGCCAGGACCCGGCTCCCATCCGAGAGTGCCATG...TGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | CTGATTCAGTCAACTATGATTCCATCCCCCGCCTCCTTCTGGCTTTCTTGTATAGAGGCCACATTGGGCTaGTTGCCGACAATTCCAACG | + |
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Preference number: 4 (lower is better) Translates to: LIQSTMIPSPASFWLSCIEATLG*LPTIPT Trigger: CGTTGGAATTGTCGGCAACCAGCCCAATGTGGCCTC...TATACAAGAAAGCCAGAAGGAGGCGGGGGATGGAATCATAGTTGACTGAATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | ATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACCAGAGCTGGGCCAGGCATAGTTaGTGTCACCAAGAAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MSTSEGHKNHTHISVNQSWARHS*CHQEGV Trigger: AACACCTTCTTGGTGACACCAACTATGCCTGGCCCA...GCTCTGGTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | GATTCAGTCAACTATGATTCCATCCCCCGCCTCCTTCTGGCTTTCTTGTATAAGTCCACATACTCTGCCTaGGCGGCTTCCACATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSVNYDSIPRLLLAFLYKSTYSA*AASTSW Trigger: CCAAGATGTGGAAGCCGCCCAGGCAGAGTATGTGGA...CTTATACAAGAAAGCCAGAAGGAGGCGGGGGATGGAATCATAGTTGACTGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | AGCATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACCAGCTGCTGGGAAAGGGTTaGCGAACTTCTCCACATACT | + |
|
Preference number: 4 (lower is better) Translates to: SMSTSEGHKNHTHISVNQLLGKG*RTSPHT Trigger: AGTATGTGGAGAAGTTCGCCAACCCTTTCCCAGCAG...CTGGTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | TCCAGCATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACAGCACGAGTAGAGGATaGCTGGATGATGTCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSMSTSEGHKNHTHISVNSTSRG*LDDVIH Trigger: GTGGATGACATCATCCAGCCATCCTCTACTCGTGCT...GTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACATGCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | GCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCCACCCTTTGCTCCCATaGCCGCAATCTCAGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AHSFTPGPRTLYANQSVSHPLLP*PQSQLW Trigger: CCACAGCTGAGATTGCGGTCATGGGAGCAAAGGGTG...GGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | CACAAAAATCATACCCACATCAGTGTGAACCAGAGCCTGATTCAGTCAACTATGCCCTCTCACGGCTGCTaGGAAAGGGTTGGCGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: HKNHTHISVNQSLIQSTMPSHGC*ERVGEL Trigger: AAGTTCGCCAACCCTTTCCCAGCAGCCGTGAGAGGG...CATAGTTGACTGAATCAGGCTCTGGTTCACACTGATGTGGGTATGATTTTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | AATAGAGCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCACGCAATTCAGAACGCTaGGCCTCGCTCCAGCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NRAHSFTPGPRTLYANQSRNSER*ASLQPP Trigger: TGGCGGCTGGAGCGAGGCTCAGCGTTCTGAATTGCG...TGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGCTCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR TCA 90 bp | GATTCAGTCAACTATGATTCCATCCCCCGCCTCCTTCTGGCTTTCTTGTATAAGATGCGTCACAGAATCTaGCAAAACGAGCCCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSVNYDSIPRLLLAFLYKMRHRI*QNEPPS Trigger: TGAAGGGGGCTCGTTTTGTCAGATTCTGTGACGCAT...CTTATACAAGAAAGCCAGAAGGAGGCGGGGGATGGAATCATAGTTGACTGAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CCA 90 bp | TTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACACCTGACACAGTGGTGTaGGTCTTGGCACCACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FYSRPKNSLCKSISVQDTPDTVV*VLAPPS Trigger: GCTGGGTGGTGCCAAGACCCACACCACTGTGTCAGG...TGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACATAGAGAACCAGACGGTCACTaGGGTCATGGCACTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TPGPRTLYANQSVSKIHREPDGH*GHGTLG Trigger: TCCGAGAGTGCCATGACCCCAGTGACCGTCTGGTTC...TCTATGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CCA 90 bp | GCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCGAGGCCACATTGGGCTaGTTGCCGACAATTCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: AHSFTPGPRTLYANQSVSEATLG*LPTIPT Trigger: CGTTGGAATTGTCGGCAACCAGCCCAATGTGGCCTC...GGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACATAGAACATGTCGCTCTCCATaGAGCTGCCAGGATCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPGPRTLYANQSVSKIHRTCRSP*SCQDPA Trigger: TGCTGGATCCTGGCAGCTTCATGGAGAGCGACATGT...TCTATGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR TCA 90 bp | GCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAGCCCCCTTCACGGATaGATTAATGTCCAAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: AHSFTPGPRTLYANQSVSSPLHG*INVQAP Trigger: GGGTGCTTGGACATTAATTCATCCGTGAAGGGGGCT...GGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | TTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACACAGTGGTGTGGGTCTTaGCACCACCCAGCTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FYSRPKNSLCKSISVQDTQWCGS*HHPAAL Trigger: AAGAGCAGCTGGGTGGTGCCAAGACCCACACCACTG...TGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CCA 90 bp | CTGATTCAGTCAACTATGATTCCATCCCCCGCCTCCTTCTGGCTTTCTTGTATATCGTCAATCACTGCGTaGATGATGTCCAGCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LIQSTMIPSPASFWLSCISSITA*MMSSML Trigger: CAACATGCTGGACATCATCCACGCAGTGATTGACGA...TATACAAGAAAGCCAGAAGGAGGCGGGGGATGGAATCATAGTTGACTGAATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACATAGACCACCCAGCTGCTCTTaGGTGACATCCTCATTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TPGPRTLYANQSVSKIHRPPSCS*VTSSLV Trigger: TACCAATGAGGATGTCACTCAAGAGCAGCTGGGTGG...TCTATGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR TCA 90 bp | TTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACATCTATGGGCCACACCTaGCACAGTGGTGTGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FYSRPKNSLCKSISVQDTSMGHT*HSGVGL Trigger: AAGACCCACACCACTGTGTCAGGTGTGGCCCATAGA...TGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | GCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCGGTGTTTGGAGCTCATaGCATCATAGGCACCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AHSFTPGPRTLYANQSVSGVWSS*HHRHLH Trigger: ATGGAGGTGCCTATGATGTCATGAGCTCCAAACACC...GGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR GCA 90 bp | GATTCAGTCAACTATGATTCCATCCCCCGCCTCCTTCTGGCTTTCTTGTATAAGGCATGTTGTAGGCTTTaGTTGACTCCAAAGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: DSVNYDSIPRLLLAFLYKACCRL*LTPKGQ Trigger: TTGTCCCTTTGGAGTCAAGCAAAGCCTACAACATGC...CTTATACAAGAAAGCCAGAAGGAGGCGGGGGATGGAATCATAGTTGACTGAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR GCA 90 bp | CTGATTCAGTCAACTATGATTCCATCCCCCGCCTCCTTCTGGCTTTCTTGTATAGCATGTTGTAGGCTTTaGTTGACTCCAAAGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: LIQSTMIPSPASFWLSCIACCRL*LTPKGQ Trigger: TTGTCCCTTTGGAGTCAAGCAAAGCCTACAACATGC...TATACAAGAAAGCCAGAAGGAGGCGGGGGATGGAATCATAGTTGACTGAATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CCA 90 bp | GCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCTGGGCCAGGCATAGTTaGTGTCACCAAGAAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AHSFTPGPRTLYANQSVSWARHS*CHQEGV Trigger: AACACCTTCTTGGTGACACCAACTATGCCTGGCCCA...GGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | TTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACACCGCAATCTCAGCTGTaGGCCAGGCATAGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FYSRPKNSLCKSISVQDTPQSQL*ARHSWC Trigger: ACACCAACTATGCCTGGCCCACAGCTGAGATTGCGG...TGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | AATAGAGCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCATTCCTCCAGGGACGATaGACCTTCTTGCTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NRAHSFTPGPRTLYANQSFLQGR*TFLLAR Trigger: CCTGGCCAGCAAGAAGGTCCATCGTCCCTGGAGGAA...TGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGCTCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | AATAGAGCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAAATGTCCAAGCACCCTaGGGCCACATTGGGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NRAHSFTPGPRTLYANQSNVQAP*GHIGLV Trigger: AACCAGCCCAATGTGGCCTCAGGGTGCTTGGACATT...TGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGCTCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR GCA 90 bp | GCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCATGATCAGAGAAATCTaGGGGATGACTCCAGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: AHSFTPGPRTLYANQSVSMIREI*GMTPDA Trigger: AGCGTCTGGAGTCATCCCGCAGATTTCTCTGATCAT...GGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035116.12 |
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| CDS-3UTR GCA 90 bp | GCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACATAGATCCATTTAGCAGCTTGGCACCATaGCTGATGATGCCCCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: AQELFMQINQCPRYIDPFSSLAP*LMMPPY Trigger: GTATGGGGGCATCATCAGGCATGGTGCCAAGCTGCT...AAATGGATCTATGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | GCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACATAGATCCATTTTCCACATACTCTGCCTaGGCGGCTTCCACATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AQELFMQINQCPRYIDPFSTYSA*AASTSW Trigger: CCAAGATGTGGAAGCCGCCCAGGCAGAGTATGTGGA...AAATGGATCTATGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | AATAGAGCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCACCACCCAGCTGCTCTTaGGTGACATCCTCATTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NRAHSFTPGPRTLYANQSPPSCS*VTSSLV Trigger: TACCAATGAGGATGTCACTCAAGAGCAGCTGGGTGG...TGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGCTCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR TCA 90 bp | TTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACAGTTGTAGGCTTTGCTTaGCTCCAAAGGGACAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FYSRPKNSLCKSISVQDTVVGFA*LQRDNC Trigger: ACAGTTGTCCCTTTGGAGTCAAGCAAAGCCTACAAC...TGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR GCA 90 bp | TTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACATCACAGTGGGATATTTaGATGTTTCCTCCAGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: FYSRPKNSLCKSISVQDTSQWDI*MFPPGT Trigger: CGTCCCTGGAGGAAACATGCAAATATCCCACTGTGA...TGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS-3UTR CCA 90 bp | AATAGAGCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCATCGTCAATCACTGCGTaGATGATGTCCAGCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NRAHSFTPGPRTLYANQSSSITA*MMSSML Trigger: CAACATGCTGGACATCATCCACGCAGTGATTGACGA...TGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGCTCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS GCA 90 bp | TCCGCTCCCTGGCTGTTAGCTTCCCTCGCTTGTGCTGCGCGTCGATaGGGCGCTGGCCTCCTCCCAGCAACGCTGCATGGCGCTTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SAPWLLASLACAARR*GAGLLPATLHGACC Trigger: ACAACAAGCGCCATGCAGCGTTGCTGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCACAAGCGAGGGAAGCTAACAGCCAGGGAGCGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 ENSMUST00000189498.2 |
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| CDS CCA 90 bp | CTGGCTGTTAGCTTCCCTCGCTTGTGCTGCGCGTCGATGCGGCGCTaGCCTCCTCCCAGCAACGCTGCATGGCGCTTGTTGTCGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LAVSFPRLCCASMRR*PPPSNAAWRLLSMR Trigger: GCGCATCGACAACAAGCGCCATGCAGCGTTGCTGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCACAAGCGAGGGAAGCTAACAGCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 ENSMUST00000189498.2 |
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| CDS GCA 90 bp | AGCAGAAGACTGATCCGCTCCCTGGCTGTTAGCTTCCCTCGCTTGTaGTGCGCGTCGATGCGGCGCTGGCCTCCTCCCAGCAACGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRRLIRSLAVSFPRL*CASMRRWPPPSNAA Trigger: TGCAGCGTTGCTGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCACAAGCGAGGGAAGCTAACAGCCAGGGAGCGGATCAGTCTTCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 ENSMUST00000189498.2 |
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| CDS GCA 90 bp | ATTCGGCCCCGTCCAGTGACCACACTATCTCCGGGAAATCGCTTGTaGTGCGCGTCGATGCGGCGCTGGCCTCCTCCCAGCAACGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IRPRPVTTLSPGNRL*CASMRRWPPPSNAA Trigger: TGCAGCGTTGCTGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCACAAGCGATTTCCCGGAGATAGTGTGGTCACTGGACGGGGCCGAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142676.8 |
||
| CDS CCA 90 bp | TGCTGCGCGTCGATGCGGCGCTGGCCTCCTCCCAGCAACGCTGCATaGCGCTTGTTGTCGATGCGCTCTTTAACTGAAACCGGCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CCASMRRWPPPSNAA*RLLSMRSLTETGWL Trigger: CAGCCAGCCGGTTTCAGTTAAAGAGCGCATCGACAACAAGCGCCATGCAGCGTTGCTGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035116.12 ENSMUST00000142676.8 ENSMUST00000149322.8 ENSMUST00000189498.2 |
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| CDS CCA 90 bp | ACACTATCTCCGGGAAATCGCTTGTGCTGCGCGTCGATGCGGCGCTaGCCTCCTCCCAGCAACGCTGCATGGCGCTTGTTGTCGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TLSPGNRLCCASMRR*PPPSNAAWRLLSMR Trigger: GCGCATCGACAACAAGCGCCATGCAGCGTTGCTGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCACAAGCGATTTCCCGGAGATAGTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142676.8 |
||
| CDS TCA 90 bp | TCCCAGCAACGCTGCATGGCGCTTGTTGTCGATGCGCTCTTTAACTaGAACCGGCTGGCTGCAAAGGCCGCGGGTCGTGATGCCGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SQQRCMALVVDALFN*NRLAAKAAGRDAEA Trigger: GGCCTCGGCATCACGACCCGCGGCCTTTGCAGCCAGCCGGTTTCAGTTAAAGAGCGCATCGACAACAAGCGCCATGCAGCGTTGCTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035116.12 ENSMUST00000142676.8 ENSMUST00000149322.8 ENSMUST00000189498.2 |
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| CDS CCA 90 bp | GCTGCATGGCGCTTGTTGTCGATGCGCTCTTTAACTGAAACCGGCTaGCTGCAAAGGCCGCGGGTCGTGATGCCGAGGCCGCAATTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AAWRLLSMRSLTETG*LQRPRVVMPRPQFR Trigger: TCTGAATTGCGGCCTCGGCATCACGACCCGCGGCCTTTGCAGCCAGCCGGTTTCAGTTAAAGAGCGCATCGACAACAAGCGCCATGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035116.12 ENSMUST00000142676.8 ENSMUST00000149322.8 ENSMUST00000189498.2 |
||
| CDS CCA 90 bp | AGACGGTCACTGGGGTCATGGCACTCTCGGATGGGAGCCGGGTCCTaGCTGCTGAGGGGCAGGAAATTGAAGAATTCACGCAGGTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGSWHSRMGAGS*LLRGRKLKNSRRLH Trigger: GTGTAACCTGCGTGAATTCTTCAATTTCCTGCCCCTCAGCAGCCAGGACCCGGCTCCCATCCGAGAGTGCCATGACCCCAGTGACCGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCTCCAGCATGTCGACCTCGGACGATGGACCTTCTaGCTGGCCAGGACTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ISLLSLPHTEFKLQHVDLGRWTF*LARTSR Trigger: CCTGGAAGTCCTGGCCAGCAAGAAGGTCCATCGTCC...GAGGTCGACATGCTGGAGCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGGGGAAAGACTAAGAACTCTTAGCCTCTTCAGCACAGAGCCCAGCCCAGGACGATGGACCTTCTaGCTGGCCAGGACTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAGERLRTLSLFSTEPSPGRWTF*LARTSR Trigger: CCTGGAAGTCCTGGCCAGCAAGAAGGTCCATCGTCC...TGGGCTGGGCTCTGTGCTGAAGAGGCTAAGAGTTCTTAGTCTTTCCCCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | CCACAGCATCTCCCACTATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCGCCACATTGGGCTGGTaGCCGACAATTCCAACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PQHLPLSLCSHYPTRSSSATLGW*PTIPTV Trigger: GACCGTTGGAATTGTCGGCAACCAGCCCAATGTGGC...GCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGATAGTGGGAGATGCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCTCCAGCATGTCGACCTCCACCCTGAGGCCACATaGGGCTGGTTGCCGACAATT | + |
|
Preference number: 5 (lower is better) Translates to: ISLLSLPHTEFKLQHVDLHPEAT*GWLPTI Trigger: AATTGTCGGCAACCAGCCCAATGTGGCCTCAGGGTG...GAGGTCGACATGCTGGAGCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS GCA 90 bp | ACCTCCATAGGCCTTCCTGGTGATGACTGTGATTTTGGGCACAGTTaGCTCGGCGAACGCGTAGAGCAGCTTGGCACCATGCCTGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: TSIGLPGDDCDFGHS*LGERVEQLGTMPDD Trigger: ATCATCAGGCATGGTGCCAAGCTGCTCTACGCGTTCGCCGAGGCAACTGTGCCCAAAATCACAGTCATCACCAGGAAGGCCTATGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | CTGATTCAGTCAACTATGATTCCATCCCCCGCCTCCTTCTGGCTTTCTTGTATAGCGCCCCCGGAGTCATaGAGCCCGATCACTGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LIQSTMIPSPASFWLSCIAPPES*SPITGA Trigger: GGCTCCAGTGATCGGGCTCAATGACTCCGGGGGCGC...TATACAAGAAAGCCAGAAGGAGGCGGGGGATGGAATCATAGTTGACTGAATCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCTCCAGCATGTCGACCTCGCTGCTGGGAAAGGGTaGGCGAACTTCTCCACATAC | + |
|
Preference number: 5 (lower is better) Translates to: ISLLSLPHTEFKLQHVDLAAGKG*ANFSTY Trigger: GTATGTGGAGAAGTTCGCCAACCCTTTCCCAGCAGC...GAGGTCGACATGCTGGAGCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | CTATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCTCCAGCATGTCGACCACCACCCAGCTGCTCTaGAGTGACATCCTCATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSLCSHYPTRSSSSSMSTTTQLL*SDILIG Trigger: ACCAATGAGGATGTCACTCAAGAGCAGCTGGGTGGT...GGTCGACATGCTGGAGCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACCAGAGCACAGTGGTGTGGGTCTaGGCACCACCCAGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MSTSEGHKNHTHISVNQSTVVWV*APPSCS Trigger: AGAGCAGCTGGGTGGTGCCAAGACCCACACCACTGT...GCTCTGGTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS TCA 90 bp | ACACCTGACACAGTGGTGTGGGTCTTGGCACCACCCAGCTGCTCTTaGGTGACATCCTCATTGGTAACAGACTTCACAACTTCAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPDTVVWVLAPPSCS*VTSSLVTDFTTSGP Trigger: TGGCCCTGAAGTTGTGAAGTCTGTTACCAATGAGGATGTCACTCAAGAGCAGCTGGGTGGTGCCAAGACCCACACCACTGTGTCAGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035116.12 ENSMUST00000142676.8 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | GATTCAGTCAACTATGATTCCATCCCCCGCCTCCTTCTGGCTTTCTTGTATAAGGTTAGCTTCCCTCGCTaGTGCTGCGCGTCGATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: DSVNYDSIPRLLLAFLYKVSFPR*CCASMR Trigger: CCGCATCGACGCGCAGCACAAGCGAGGGAAGCTAAC...CTTATACAAGAAAGCCAGAAGGAGGCGGGGGATGGAATCATAGTTGACTGAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | CTGATTCAGTCAACTATGATTCCATCCCCCGCCTCCTTCTGGCTTTCTTGTATAGTTAGCTTCCCTCGCTaGTGCTGCGCGTCGATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LIQSTMIPSPASFWLSCIVSFPR*CCASMR Trigger: CCGCATCGACGCGCAGCACAAGCGAGGGAAGCTAAC...TATACAAGAAAGCCAGAAGGAGGCGGGGGATGGAATCATAGTTGACTGAATCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCTCCAGCATGTCGACCTCGGCGGCTTCCACATCTaGGTGTCCTTTGAAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: ISLLSLPHTEFKLQHVDLGGFHI*VSFEDD Trigger: ATCATCTTCAAAGGACACCAAGATGTGGAAGCCGCC...GAGGTCGACATGCTGGAGCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS TCA 90 bp | GTCAATCACTGCGTGGATGATGTCCAGCATGTTGTAGGCTTTGCTTaGCTCCAAAGGGACAACTGTGTCCAGCTCAGGAACCAGACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VNHCVDDVQHVVGFA*LQRDNCVQLRNQTV Trigger: GACCGTCTGGTTCCTGAGCTGGACACAGTTGTCCCTTTGGAGTCAAGCAAAGCCTACAACATGCTGGACATCATCCACGCAGTGATTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACATAGAGCGCCCCCGGAGTCATaGAGCCCGATCACTGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPGPRTLYANQSVSKIHRAPPES*SPITGA Trigger: GGCTCCAGTGATCGGGCTCAATGACTCCGGGGGCGC...TCTATGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGGGGAAAGACTAAGAACTCTTAGCCTCTTCAGCACAGAGCCCAGCCCAAGAGCATCAACATCATaGTCGAAAGCTCTATGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AAGERLRTLSLFSTEPSPRASTS*SKALWA Trigger: GGCCCATAGAGCTTTCGACAATGATGTTGATGCTCT...TGGGCTGGGCTCTGTGCTGAAGAGGCTAAGAGTTCTTAGTCTTTCCCCAGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | CCACAGCATCTCCCACTATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCGTGATGAGGGGAATGTaGAATGCGTCACAGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PQHLPLSLCSHYPTRSSSVMRGM*NASQNL Trigger: CAGATTCTGTGACGCATTCAACATTCCCCTCATCAC...GCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGATAGTGGGAGATGCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGCATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACGTGATGACTGTGATTTaGGGCACAGTTGCCTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSMSTSEGHKNHTHISVNVMTVI*GTVASA Trigger: CGCCGAGGCAACTGTGCCCAAAATCACAGTCATCAC...GTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACATGCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACCAGAGCGTGATGACTGTGATTTaGGGCACAGTTGCCTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: MSTSEGHKNHTHISVNQSVMTVI*GTVASA Trigger: CGCCGAGGCAACTGTGCCCAAAATCACAGTCATCAC...GCTCTGGTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCTCCAGCATGTCGACCTCTCCTCCCATTCATTCTaGCGAAGCCAACGACAATAT | + |
|
Preference number: 5 (lower is better) Translates to: ISLLSLPHTEFKLQHVDLSSHSF*RSQRQY Trigger: ATATTGTCGTTGGCTTCGCAAGAATGAATGGGAGGA...GAGGTCGACATGCTGGAGCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | CCACAGCATCTCCCACTATCTCTCTGCTCTCACTACCCCACACGGAGTTCAAGCACATCTTGGTGTCCTTaGAAGATGATCTCCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PQHLPLSLCSHYPTRSSSTSWCP*KMISTA Trigger: TGCTGTGGAGATCATCTTCAAAGGACACCAAGATGT...GCTTGAACTCCGTGTGGGGTAGTGAGAGCAGAGAGATAGTGGGAGATGCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | CACAAAAATCATACCCACATCAGTGTGAACCAGAGCCTGATTCAGTCAACTATGACAGTGGTGTGGGTCTaGGCACCACCCAGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HKNHTHISVNQSLIQSTMTVVWV*APPSCS Trigger: AGAGCAGCTGGGTGGTGCCAAGACCCACACCACTGT...CATAGTTGACTGAATCAGGCTCTGGTTCACACTGATGTGGGTATGATTTTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACCAGAGCCTGAGGGGCAGGAAATaGAAGAATTCACGCAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: MSTSEGHKNHTHISVNQSLRGRK*KNSRRL Trigger: TAACCTGCGTGAATTCTTCAATTTCCTGCCCCTCAG...GCTCTGGTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | AGCATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACCAGCTGAGGGGCAGGAAATaGAAGAATTCACGCAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SMSTSEGHKNHTHISVNQLRGRK*KNSRRL Trigger: TAACCTGCGTGAATTCTTCAATTTCCTGCCCCTCAG...CTGGTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACATGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | AGCATGTCGACCTCTGAGGGCCACAAAAATCATACCCACATCAGTGTGAACCAGTCCTCCCATTCATTCTaGCGAAGCCAACGACAATAT | + |
|
Preference number: 5 (lower is better) Translates to: SMSTSEGHKNHTHISVNQSSHSF*RSQRQY Trigger: ATATTGTCGTTGGCTTCGCAAGAATGAATGGGAGGA...CTGGTTCACACTGATGTGGGTATGATTTTTGTGGCCCTCAGAGGTCGACATGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | AGAGCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGGCCACATTGGGCTGGTaGCCGACAATTCCAACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RAHSFTPGPRTLYANQSVATLGW*PTIPTV Trigger: GACCGTTGGAATTGTCGGCAACCAGCCCAATGTGGC...CACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACATAGACACCCTGAGGCCACATaGGGCTGGTTGCCGACAATT | + |
|
Preference number: 5 (lower is better) Translates to: TPGPRTLYANQSVSKIHRHPEAT*GWLPTI Trigger: AATTGTCGGCAACCAGCCCAATGTGGCCTCAGGGTG...TCTATGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | AGAGCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGACCACCCAGCTGCTCTaGAGTGACATCCTCATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RAHSFTPGPRTLYANQSVTTQLL*SDILIG Trigger: ACCAATGAGGATGTCACTCAAGAGCAGCTGGGTGGT...CACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | GATTCAGTCAACTATGATTCCATCCCCCGCCTCCTTCTGGCTTTCTTGTATAAGACATCTTGGTGTCCTTaGAAGATGATCTCCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DSVNYDSIPRLLLAFLYKTSWCP*KMISTA Trigger: TGCTGTGGAGATCATCTTCAAAGGACACCAAGATGT...CTTATACAAGAAAGCCAGAAGGAGGCGGGGGATGGAATCATAGTTGACTGAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACATAGAGGCGGCTTCCACATCTaGGTGTCCTTTGAAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: TPGPRTLYANQSVSKIHRGGFHI*VSFEDD Trigger: ATCATCTTCAAAGGACACCAAGATGTGGAAGCCGCC...TCTATGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | GCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACATAGATCCATTTGCTGCTGGGAAAGGGTaGGCGAACTTCTCCACATAC | + |
|
Preference number: 5 (lower is better) Translates to: AQELFMQINQCPRYIDPFAAGKG*ANFSTY Trigger: GTATGTGGAGAAGTTCGCCAACCCTTTCCCAGCAGC...AAATGGATCTATGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | GCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACATAGATCCATTTAACGCTGCATGGCGCTaGTTGTCGATGCGCTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: AQELFMQINQCPRYIDPFNAAWR*LSMRSL Trigger: TAAAGAGCGCATCGACAACAAGCGCCATGCAGCGTT...AAATGGATCTATGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGTCCAAGATACATAGAAGAGCATCAACATCATaGTCGAAAGCTCTATGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPGPRTLYANQSVSKIHRRASTS*SKALWA Trigger: GGCCCATAGAGCTTTCGACAATGATGTTGATGCTCT...TCTATGTATCTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS-3UTR CAA 90 bp | AGAGCACATAGTTTTACTCCAGGCCCAAGAACTCTTTATGCAAATCAATCAGTGGTGATGAGGGGAATGTaGAATGCGTCACAGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RAHSFTPGPRTLYANQSVVMRGM*NASQNL Trigger: CAGATTCTGTGACGCATTCAACATTCCCCTCATCAC...CACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAACTATGTGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS GCA 72 bp | CTGATCCGCTCCCTGGCTGTTAGCTTCCCTCGCTTGTaGTGCGCGTCGATGCGGCGCTGGCCTCCTCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LIRSLAVSFPRL*CASMRRWPPPS Trigger: GCTGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCACAAGCGAGGGAAGCTAACAGCCAGGGAGCGGATCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 ENSMUST00000189498.2 |
||
| CDS GCA 72 bp | TGGCTGTTAGCTTCCCTCGCTTGTGCTGCGCGTCGATaGGGCGCTGGCCTCCTCCCAGCAACGCTGCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: WLLASLACAARR*GAGLLPATLHG Trigger: GCCATGCAGCGTTGCTGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCACAAGCGAGGGAAGCTAACAGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 ENSMUST00000189498.2 |
||
| CDS GCA 72 bp | ATCCGCTCCCTGGCTGTTAGCTTCCCTCGCTTGTGCTaGGCGTCGATGCGGCGCTGGCCTCCTCCCAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: IRSLAVSFPRLC*ASMRRWPPPSN Trigger: GTTGCTGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCACAAGCGAGGGAAGCTAACAGCCAGGGAGCGGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 ENSMUST00000189498.2 |
||
| CDS CCA 72 bp | AGCTTCCCTCGCTTGTGCTGCGCGTCGATGCGGCGCTaGCCTCCTCCCAGCAACGCTGCATGGCGCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SFPRLCCASMRR*PPPSNAAWRLL Trigger: CAACAAGCGCCATGCAGCGTTGCTGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCACAAGCGAGGGAAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 ENSMUST00000189498.2 |
||
| CDS CCA 72 bp | CCGGGAAATCGCTTGTGCTGCGCGTCGATGCGGCGCTaGCCTCCTCCCAGCAACGCTGCATGGCGCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PGNRLCCASMRR*PPPSNAAWRLL Trigger: CAACAAGCGCCATGCAGCGTTGCTGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCACAAGCGATTTCCCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142676.8 |
||
| CDS GCA 72 bp | CACTATCTCCGGGAAATCGCTTGTGCTGCGCGTCGATaGGGCGCTGGCCTCCTCCCAGCAACGCTGCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: HYLREIACAARR*GAGLLPATLHG Trigger: GCCATGCAGCGTTGCTGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCACAAGCGATTTCCCGGAGATAGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142676.8 |
||
| CDS GCA 72 bp | CGTCCAGTGACCACACTATCTCCGGGAAATCGCTTGTaGTGCGCGTCGATGCGGCGCTGGCCTCCTCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RPVTTLSPGNRL*CASMRRWPPPS Trigger: GCTGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCACAAGCGATTTCCCGGAGATAGTGTGGTCACTGGACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142676.8 |
||
| CDS GCA 72 bp | CCAGTGACCACACTATCTCCGGGAAATCGCTTGTGCTaGGCGTCGATGCGGCGCTGGCCTCCTCCCAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: PVTTLSPGNRLC*ASMRRWPPPSN Trigger: GTTGCTGGGAGGAGGCCAGCGCCGCATCGACGCGCAGCACAAGCGATTTCCCGGAGATAGTGTGGTCACTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142676.8 |
||
| CDS CAA 90 bp | TCGATGCGGCGCTGGCCTCCTCCCAGCAACGCTGCATGGCGCTTGTaGTCGATGCGCTCTTTAACTGAAACCGGCTGGCTGCAAAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SMRRWPPPSNAAWRL*SMRSLTETGWLQRP Trigger: CGGCCTTTGCAGCCAGCCGGTTTCAGTTAAAGAGCGCATCGACAACAAGCGCCATGCAGCGTTGCTGGGAGGAGGCCAGCGCCGCATCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035116.12 ENSMUST00000142676.8 ENSMUST00000149322.8 ENSMUST00000189498.2 |
||
| CDS CAA 90 bp | GCGTCGATGCGGCGCTGGCCTCCTCCCAGCAACGCTGCATGGCGCTaGTTGTCGATGCGCTCTTTAACTGAAACCGGCTGGCTGCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ASMRRWPPPSNAAWR*LSMRSLTETGWLQR Trigger: CCTTTGCAGCCAGCCGGTTTCAGTTAAAGAGCGCATCGACAACAAGCGCCATGCAGCGTTGCTGGGAGGAGGCCAGCGCCGCATCGACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035116.12 ENSMUST00000142676.8 ENSMUST00000149322.8 ENSMUST00000189498.2 |
||
| CDS CCA 72 bp | CGCTTGTTGTCGATGCGCTCTTTAACTGAAACCGGCTaGCTGCAAAGGCCGCGGGTCGTGATGCCGAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RLLSMRSLTETG*LQRPRVVMPRP Trigger: CGGCCTCGGCATCACGACCCGCGGCCTTTGCAGCCAGCCGGTTTCAGTTAAAGAGCGCATCGACAACAAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035116.12 ENSMUST00000142676.8 ENSMUST00000149322.8 ENSMUST00000189498.2 |
||
| CDS CCA 72 bp | CTGGGGTCATGGCACTCTCGGATGGGAGCCGGGTCCTaGCTGCTGAGGGGCAGGAAATTGAAGAATTCACGC | + |
|
Preference number: 6 (lower is better) Translates to: LGSWHSRMGAGS*LLRGRKLKNSR Trigger: GCGTGAATTCTTCAATTTCCTGCCCCTCAGCAGCCAGGACCCGGCTCCCATCCGAGAGTGCCATGACCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
||
| CDS TCA 72 bp | CGCTGCATGGCGCTTGTTGTCGATGCGCTCTTTAACTaGAACCGGCTGGCTGCAAAGGCCGCGGGTCGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: RCMALVVDALFN*NRLAAKAAGRD Trigger: ATCACGACCCGCGGCCTTTGCAGCCAGCCGGTTTCAGTTAAAGAGCGCATCGACAACAAGCGCCATGCAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035116.12 ENSMUST00000142676.8 ENSMUST00000149322.8 ENSMUST00000189498.2 |
||
| CDS GCA 72 bp | GCCCCACCAGCACACGGGCCCATGATCAGAGAAATCTaGGGGATGACTCCAGACGCTGTGACATTCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: APPAHGPMIREI*GMTPDAVTFLR Trigger: CCTGAGGAATGTCACAGCGTCTGGAGTCATCCCGCAGATTTCTCTGATCATGGGCCCGTGTGCTGGTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000142676.8 |
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| CDS GCA 72 bp | GGCCTTCCTGGTGATGACTGTGATTTTGGGCACAGTTaGCTCGGCGAACGCGTAGAGCAGCTTGGCACCATG | + |
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Preference number: 6 (lower is better) Translates to: GLPGDDCDFGHS*LGERVEQLGTM Trigger: CATGGTGCCAAGCTGCTCTACGCGTTCGCCGAGGCAACTGTGCCCAAAATCACAGTCATCACCAGGAAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS CCA 72 bp | GATTCTGGCGCCCCCGGAGTCATTGAGCCCGATCACTaGAGCCCCCACTGTTATGGCCTGGTCCATGATTTT | + |
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Preference number: 6 (lower is better) Translates to: DSGAPGVIEPDH*SPHCYGLVHDF Trigger: AAAATCATGGACCAGGCCATAACAGTGGGGGCTCCAGTGATCGGGCTCAATGACTCCGGGGGCGCCAGAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000035116.12 ENSMUST00000142676.8 ENSMUST00000149322.8 |
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| CDS CAA 90 bp | CACTCTCGGATGGGAGCCGGGTCCTGGCTGCTGAGGGGCAGGAAATaGAAGAATTCACGCAGGTTACACAGAGCATCAACATCATTGTCG | + |
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Preference number: 6 (lower is better) Translates to: HSRMGAGSWLLRGRK*KNSRRLHRASTSLS Trigger: CGACAATGATGTTGATGCTCTGTGTAACCTGCGTGAATTCTTCAATTTCCTGCCCCTCAGCAGCCAGGACCCGGCTCCCATCCGAGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035116.12 ENSMUST00000142676.8 ENSMUST00000149322.8 |
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| CDS CCA 72 bp | CTGGATGATGTCATCCACAAACCCTCTCACGGCTGCTaGGAAAGGGTTGGCGAACTTCTCCACATACTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LDDVIHKPSHGC*ERVGELLHILC Trigger: GCAGAGTATGTGGAGAAGTTCGCCAACCCTTTCCCAGCAGCCGTGAGAGGGTTTGTGGATGACATCATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS CCA 72 bp | AGGTCACAGCATATCCGAGCACGAGTAGAGGATGGCTaGATGATGTCATCCACAAACCCTCTCACGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RSQHIRARVEDG*MMSSTNPLTAA Trigger: AGCAGCCGTGAGAGGGTTTGTGGATGACATCATCCAGCCATCCTCTACTCGTGCTCGGATATGCTGTGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS CCA 72 bp | TTCCAGGTCACAGCATATCCGAGCACGAGTAGAGGATaGCTGGATGATGTCATCCACAAACCCTCTCACGGC | + |
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Preference number: 6 (lower is better) Translates to: FQVTAYPSTSRG*LDDVIHKPSHG Trigger: GCCGTGAGAGGGTTTGTGGATGACATCATCCAGCCATCCTCTACTCGTGCTCGGATATGCTGTGACCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS CCA 72 bp | CACAGTGGGATATTTGCATGTTTCCTCCAGGGACGATaGACCTTCTTGCTGGCCAGGACTTCCAGGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: HSGIFACFLQGR*TFLLARTSRSQ Trigger: CTGTGACCTGGAAGTCCTGGCCAGCAAGAAGGTCCATCGTCCCTGGAGGAAACATGCAAATATCCCACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS CAA 72 bp | ATGGGAGCCGGGTCCTGGCTGCTGAGGGGCAGGAAATaGAAGAATTCACGCAGGTTACACAGAGCATCAACA | + |
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Preference number: 6 (lower is better) Translates to: MGAGSWLLRGRK*KNSRRLHRAST Trigger: TGTTGATGCTCTGTGTAACCTGCGTGAATTCTTCAATTTCCTGCCCCTCAGCAGCCAGGACCCGGCTCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035116.12 ENSMUST00000142676.8 ENSMUST00000149322.8 |
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| CDS CAA 72 bp | ACGGATGAATTAATGTCCAAGCACCCTGAGGCCACATaGGGCTGGTTGCCGACAATTCCAACGGTCCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: TDELMSKHPEAT*GWLPTIPTVLP Trigger: TGGGAGGACCGTTGGAATTGTCGGCAACCAGCCCAATGTGGCCTCAGGGTGCTTGGACATTAATTCATCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS CAA 90 bp | CACAGTGGGATATTTGCATGTTTCCTCCAGGGACGATGGACCTTCTaGCTGGCCAGGACTTCCAGGTCACAGCATATCCGAGCACGAGTA | + |
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Preference number: 6 (lower is better) Translates to: HSGIFACFLQGRWTF*LARTSRSQHIRARV Trigger: TACTCGTGCTCGGATATGCTGTGACCTGGAAGTCCTGGCCAGCAAGAAGGTCCATCGTCCCTGGAGGAAACATGCAAATATCCCACTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS GCA 72 bp | TATTTGCATGTTTCCTCCAGGGACGATGGACCTTCTTaGTGGCCAGGACTTCCAGGTCACAGCATATCCGAG | + |
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Preference number: 6 (lower is better) Translates to: YLHVSSRDDGPS*WPGLPGHSISE Trigger: CTCGGATATGCTGTGACCTGGAAGTCCTGGCCAGCAAGAAGGTCCATCGTCCCTGGAGGAAACATGCAAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS CAA 90 bp | ACGGATGAATTAATGTCCAAGCACCCTGAGGCCACATTGGGCTGGTaGCCGACAATTCCAACGGTCCTCCCATTCATTCTTGCGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: TDELMSKHPEATLGW*PTIPTVLPFILAKP Trigger: TGGCTTCGCAAGAATGAATGGGAGGACCGTTGGAATTGTCGGCAACCAGCCCAATGTGGCCTCAGGGTGCTTGGACATTAATTCATCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS TCA 72 bp | TGCGTGGATGATGTCCAGCATGTTGTAGGCTTTGCTTaGCTCCAAAGGGACAACTGTGTCCAGCTCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: CVDDVQHVVGFA*LQRDNCVQLRN Trigger: GTTCCTGAGCTGGACACAGTTGTCCCTTTGGAGTCAAGCAAAGCCTACAACATGCTGGACATCATCCACGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS CCA 72 bp | GAATTAATGTCCAAGCACCCTGAGGCCACATTGGGCTaGTTGCCGACAATTCCAACGGTCCTCCCATTCATT | + |
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Preference number: 6 (lower is better) Translates to: ELMSKHPEATLG*LPTIPTVLPFI Trigger: AATGAATGGGAGGACCGTTGGAATTGTCGGCAACCAGCCCAATGTGGCCTCAGGGTGCTTGGACATTAATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS CAA 72 bp | TTAATGTCCAAGCACCCTGAGGCCACATTGGGCTGGTaGCCGACAATTCCAACGGTCCTCCCATTCATTCTT | + |
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Preference number: 6 (lower is better) Translates to: LMSKHPEATLGW*PTIPTVLPFIL Trigger: AAGAATGAATGGGAGGACCGTTGGAATTGTCGGCAACCAGCCCAATGTGGCCTCAGGGTGCTTGGACATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS CAA 72 bp | AAGCCAGGGACGTCAACGAAAGTGATGAGGGGAATGTaGAATGCGTCACAGAATCTGACAAAACGAGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: KPGTSTKVMRGM*NASQNLTKRAP Trigger: GGGGGCTCGTTTTGTCAGATTCTGTGACGCATTCAACATTCCCCTCATCACTTTCGTTGACGTCCCTGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS CAA 72 bp | ATATTTGCATGTTTCCTCCAGGGACGATGGACCTTCTaGCTGGCCAGGACTTCCAGGTCACAGCATATCCGA | + |
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Preference number: 6 (lower is better) Translates to: IFACFLQGRWTF*LARTSRSQHIR Trigger: TCGGATATGCTGTGACCTGGAAGTCCTGGCCAGCAAGAAGGTCCATCGTCCCTGGAGGAAACATGCAAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035116.12 ENSMUST00000149322.8 |
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| CDS CAA 90 bp | AGGAAATTGAAGAATTCACGCAGGTTACACAGAGCATCAACATCATaGTCGAAAGCTCTATGGGCCACACCTGACACAGTGGTGTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: RKLKNSRRLHRASTS*SKALWATPDTVVWV Trigger: GACCCACACCACTGTGTCAGGTGTGGCCCATAGAGCTTTCGACAATGATGTTGATGCTCTGTGTAACCTGCGTGAATTCTTCAATTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035116.12 ENSMUST00000142676.8 ENSMUST00000149322.8 |
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| CDS CAA 72 bp | AAGAATTCACGCAGGTTACACAGAGCATCAACATCATaGTCGAAAGCTCTATGGGCCACACCTGACACAGTG | + |
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Preference number: 6 (lower is better) Translates to: KNSRRLHRASTS*SKALWATPDTV Trigger: CACTGTGTCAGGTGTGGCCCATAGAGCTTTCGACAATGATGTTGATGCTCTGTGTAACCTGCGTGAATTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035116.12 ENSMUST00000142676.8 ENSMUST00000149322.8 |
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