Pregenerated sensors for PCCA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041650Ensembl transcript IDs: ENSMUST00000038374.13, ENSMUST00000132444.2, ENSMUST00000135578.8, ENSMUST00000147018.2, ENSMUST00000152383.8, ENSMUST00000154206.8, ENSMUST00000177312.8
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGATGGCTCCATGGGGCACTGCTGGTATGGTGGCCGGGGCTCCTaGACAGTCGCATTACTGTGGCTGTGCTGGCCAATGCCACAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: ADGSMGHCWYGGRGS*TVALLWLCWPMPQK Trigger: CTTCTGTGGCATTGGCCAGCACAGCCACAGTAATGCGACTGTCCAGGAGCCCCGGCCACCATACCAGCAGTGCCCCATGGAGCCATCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR TCA 90 bp | CCCCTCCCGGCTCCCTGTGTGGCACAAGCTGTCTTGCTGGCAGTGTaGGTACTGCAGCCCTGTGCATTCTTTCCTCTGCTGTTCAGGTGG | + |
|
Preference number: 1 (lower is better) Translates to: PLPAPCVAQAVLLAV*VLQPCAFFPLLFRW Trigger: CCACCTGAACAGCAGAGGAAAGAATGCACAGGGCTGCAGTACTCACACTGCCAGCAAGACAGCTTGTGCCACACAGGGAGCCGGGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR CCA 90 bp | CTGCCATCCCCAAATGATCTCCAAGTCCCCTCCCGGCTCCCTGTGTaGCACAAGCTGTCTTGCTGGCAGTGTGAGTACTGCAGCCCTGTG | + |
|
Preference number: 1 (lower is better) Translates to: LPSPNDLQVPSRLPV*HKLSCWQCEYCSPV Trigger: CACAGGGCTGCAGTACTCACACTGCCAGCAAGACAGCTTGTGCCACACAGGGAGCCGGGAGGGGACTTGGAGATCATTTGGGGATGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR GCA 90 bp | TGGTATGGTGGCCGGGGCTCCTGGACAGTCGCATTACTGTGGCTGTaGTGGCCAATGCCACAGAAGGGCCTGGAGAATGTTCTTTCCTGC | + |
|
Preference number: 1 (lower is better) Translates to: WYGGRGSWTVALLWL*WPMPQKGLENVLSC Trigger: GCAGGAAAGAACATTCTCCAGGCCCTTCTGTGGCATTGGCCAGCACAGCCACAGTAATGCGACTGTCCAGGAGCCCCGGCCACCATACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR TCA 90 bp | TGCCACAGAAGGGCCTGGAGAATGTTCTTTCCTGCCATCCCCAAATaGTCTCCAAGTCCCCTCCCGGCTCCCTGTGTGGCACAAGCTGTC | + |
|
Preference number: 1 (lower is better) Translates to: CHRRAWRMFFPAIPK*SPSPLPAPCVAQAV Trigger: GACAGCTTGTGCCACACAGGGAGCCGGGAGGGGACTTGGAGATCATTTGGGGATGGCAGGAAAGAACATTCTCCAGGCCCTTCTGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR TCA 90 bp | TCACACAGATTTCCTGACCTTCTGCTACTCTATGAAGTGGTAGGCTaGTGGCTCCATGGGGCACTGCTGGTATGGTGGCCGGGGCTCCTG | + |
|
Preference number: 1 (lower is better) Translates to: SHRFPDLLLLYEVVG*WLHGALLVWWPGLL Trigger: CAGGAGCCCCGGCCACCATACCAGCAGTGCCCCATGGAGCCATCAGCCTACCACTTCATAGAGTAGCAGAAGGTCAGGAAATCTGTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR-3UTR GCA 90 bp | CATGGGGCACTGCTGGTATGGTGGCCGGGGCTCCTGGACAGTCGCATTACTGTGTGGCACAAGCTGTCTTaGTGGCAGTGTGAGTACTGC | + |
|
Preference number: 2 (lower is better) Translates to: HGALLVWWPGLLDSRITVWHKLS*WQCEYC Trigger: GCAGTACTCACACTGCCAGCAAGACAGCTTGTGCCA...CACAGTAATGCGACTGTCCAGGAGCCCCGGCCACCATACCAGCAGTGCCCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCCAAGGCTTCTGGTTCTaGCACGGAGGAGAGGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: LPLLRNKQEAVEPPAQECQGFWF*HGGEAL Trigger: CAGTGCCTCTCCTCCGTGCCAGAACCAGAAGCCTTG...GCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGGCTAGAAATACTTCATTCCAGCTCCACAAGCAGGTCTCCTTCACCAACTGTGAGGAGAGGCACTGCTaGCAAGCAGGCTTGGAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: KARNTSFQLHKQVSFTNCEERHC*QAGLEL Trigger: GAGCTCCAAGCCTGCTTGTCAGCAGTGCCTCTCCTC...ACAGTTGGTGAAGGAGACCTGCTTGTGGAGCTGGAATGAAGTATTTCTAGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGCTAGAAATACTTCATTCCAGCTCCACAAGCAGGTCTCCTTCACCAACTGTCCTCTGCTGTTCAGGTaGTGGGCTGTGTTTTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: KARNTSFQLHKQVSFTNCPLLFR*WAVFSW Trigger: CCAGGAAAACACAGCCCACCACCTGAACAGCAGAGG...ACAGTTGGTGAAGGAGACCTGCTTGTGGAGCTGGAATGAAGTATTTCTAGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCCCATTGGTGATTTGTTaGCAGAATGTCGGTTTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: LPLLRNKQEAVEPPAQECPLVIC*QNVGFA Trigger: GGCAAAACCGACATTCTGCCAACAAATCACCAATGG...GCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 ENSMUST00000177312.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAAAGGCTAGAAATACTTCATTCCAGCTCCACAAGCAGGTCTCCTTCACCAACAAGAATTTCCATTGGTaGTTTGTTGGCAGAATGTCG | + |
|
Preference number: 2 (lower is better) Translates to: GKARNTSFQLHKQVSFTNKNFHW*FVGRMS Trigger: CGACATTCTGCCAACAAATCACCAATGGAAATTCTT...GTTGGTGAAGGAGACCTGCTTGTGGAGCTGGAATGAAGTATTTCTAGCCTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152383.8 ENSMUST00000177312.8 |
||
| 3UTR CCA 72 bp | TATGGTGGCCGGGGCTCCTGGACAGTCGCATTACTGTaGCTGTGCTGGCCAATGCCACAGAAGGGCCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: YGGRGSWTVALL*LCWPMPQKGLE Trigger: CTCCAGGCCCTTCTGTGGCATTGGCCAGCACAGCCACAGTAATGCGACTGTCCAGGAGCCCCGGCCACCATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR CCA 72 bp | TCCATGGGGCACTGCTGGTATGGTGGCCGGGGCTCCTaGACAGTCGCATTACTGTGGCTGTGCTGGCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: SMGHCWYGGRGS*TVALLWLCWPM Trigger: CATTGGCCAGCACAGCCACAGTAATGCGACTGTCCAGGAGCCCCGGCCACCATACCAGCAGTGCCCCATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR GCA 72 bp | GGCCGGGGCTCCTGGACAGTCGCATTACTGTGGCTGTaGTGGCCAATGCCACAGAAGGGCCTGGAGAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: GRGSWTVALLWL*WPMPQKGLENV Trigger: AACATTCTCCAGGCCCTTCTGTGGCATTGGCCAGCACAGCCACAGTAATGCGACTGTCCAGGAGCCCCGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR CCA 72 bp | CCCTCCCGGCTCCCTGTGTGGCACAAGCTGTCTTGCTaGCAGTGTGAGTACTGCAGCCCTGTGCATTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PSRLPVWHKLSC*QCEYCSPVHSF Trigger: GAAAGAATGCACAGGGCTGCAGTACTCACACTGCCAGCAAGACAGCTTGTGCCACACAGGGAGCCGGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR TCA 72 bp | AGGGCCTGGAGAATGTTCTTTCCTGCCATCCCCAAATaGTCTCCAAGTCCCCTCCCGGCTCCCTGTGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RAWRMFFPAIPK*SPSPLPAPCVA Trigger: TGCCACACAGGGAGCCGGGAGGGGACTTGGAGATCATTTGGGGATGGCAGGAAAGAACATTCTCCAGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR CCA 72 bp | CCAAATGATCTCCAAGTCCCCTCCCGGCTCCCTGTGTaGCACAAGCTGTCTTGCTGGCAGTGTGAGTACTGC | + |
|
Preference number: 3 (lower is better) Translates to: PNDLQVPSRLPV*HKLSCWQCEYC Trigger: GCAGTACTCACACTGCCAGCAAGACAGCTTGTGCCACACAGGGAGCCGGGAGGGGACTTGGAGATCATTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTCCATGGGGCACTGCTGGTATGGTGGCCGGGGCTCCTGGACAGTCGCATTGGCAGAATGTCGGTTTaGCCTCTTCTGAGGAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: WLHGALLVWWPGLLDSRIGRMSV*PLLRNK Trigger: TTTATTCCTCAGAAGAGGCAAAACCGACATTCTGCC...AATGCGACTGTCCAGGAGCCCCGGCCACCATACCAGCAGTGCCCCATGGAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR TCA 72 bp | GCTCCCTGTGTGGCACAAGCTGTCTTGCTGGCAGTGTaGGTACTGCAGCCCTGTGCATTCTTTCCTCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: APCVAQAVLLAV*VLQPCAFFPLL Trigger: CAGCAGAGGAAAGAATGCACAGGGCTGCAGTACTCACACTGCCAGCAAGACAGCTTGTGCCACACAGGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR GCA 72 bp | GTGTGGCACAAGCTGTCTTGCTGGCAGTGTGAGTACTaGAGCCCTGTGCATTCTTTCCTCTGCTGTTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: VWHKLSCWQCEY*SPVHSFLCCSG Trigger: ACCTGAACAGCAGAGGAAAGAATGCACAGGGCTGCAGTACTCACACTGCCAGCAAGACAGCTTGTGCCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR CCA 72 bp | CTGCAGCCCTGTGCATTCTTTCCTCTGCTGTTCAGGTaGTGGGCTGTGTTTTCCTGGCACGGGAATATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LQPCAFFPLLFR*WAVFSWHGNIG Trigger: TCCTATATTCCCGTGCCAGGAAAACACAGCCCACCACCTGAACAGCAGAGGAAAGAATGCACAGGGCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR CCA 72 bp | TTTCCTCTGCTGTTCAGGTGGTGGGCTGTGTTTTCCTaGCACGGGAATATAGGAAGAGAGGAGATGCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: FPLLFRWWAVFS*HGNIGREEMPR Trigger: CCTTGGCATCTCCTCTCTTCCTATATTCCCGTGCCAGGAAAACACAGCCCACCACCTGAACAGCAGAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR CCA 72 bp | CAGCCCTGTGCATTCTTTCCTCTGCTGTTCAGGTGGTaGGCTGTGTTTTCCTGGCACGGGAATATAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: QPCAFFPLLFRW*AVFSWHGNIGR Trigger: TCTTCCTATATTCCCGTGCCAGGAAAACACAGCCCACCACCTGAACAGCAGAGGAAAGAATGCACAGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| 3UTR GCA 72 bp | CAAGCAGGTCTCCTTCACCAACTGTGTCTCCAGCTTTaGAGTGCACCAATTTCACCTTGCCCATTTTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QAGLLHQLCLQL*SAPISPCPFSQ Trigger: CTGGGAAAATGGGCAAGGTGAAATTGGTGCACTGCAAAGCTGGAGACACAGTTGGTGAAGGAGACCTGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152383.8 ENSMUST00000177312.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGACGGAAAGGCTAGAAATACTTCATTCCAGCTCCACAAGCAGGTCTCCTTCAACTGTGTCTCCAGCTTaGCAGTGCACCAATTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: LTERLEILHSSSTSRSPSTVSPA*QCTNFT Trigger: GGTGAAATTGGTGCACTGCAAAGCTGGAGACACAGT...TGAAGGAGACCTGCTTGTGGAGCTGGAATGAAGTATTTCTAGCCTTTCCGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152383.8 ENSMUST00000177312.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGAAATACTTCATTCCAGCTCCACAAGCAGGTCTCCTTCACCAACTGTGTCTGGCAGAATGTCGGTTTaGCCTCTTCTGAGGAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: LEILHSSSTSRSPSPTVSGRMSV*PLLRNK Trigger: TTTATTCCTCAGAAGAGGCAAAACCGACATTCTGCC...AGACACAGTTGGTGAAGGAGACCTGCTTGTGGAGCTGGAATGAAGTATTTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152383.8 ENSMUST00000177312.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGACGGAAAGGCTAGAAATACTTCATTCCAGCTCCACAAGCAGGTCTCCTTCAATTTCCATTGGTGATTaGTTGGCAGAATGTCGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LTERLEILHSSSTSRSPSISIGD*LAECRF Trigger: AAACCGACATTCTGCCAACAAATCACCAATGGAAAT...TGAAGGAGACCTGCTTGTGGAGCTGGAATGAAGTATTTCTAGCCTTTCCGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152383.8 ENSMUST00000177312.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCATCATGTAACTTTACCGAGAGCTCCCACTTAGCCACATCAGGCCTAATATTTGCTGCCTATGGCTaGCTGAGCCTATTTTCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SSSCNFTESSHLATSGLIFAAYG*LSLFSY Trigger: ATAAGAAAATAGGCTCAGCAAGCCATAGGCAGCAAA...TATTAGGCCTGATGTGGCTAAGTGGGAGCTCTCGGTAAAGTTACATGATGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147018.2 |
||
| 3UTR CCA 72 bp | AAGAATCACAATGAAATGCTAATATTTACAGTCAATTaGCACAGCCTGTCGCCTCTGTGTATATTGTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KNHNEMLIFTVN*HSLSPLCILSS Trigger: TGAAGACAATATACACAGAGGCGACAGGCTGTGCCAATTGACTGTAAATATTAGCATTTCATTGTGATTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR GCA 90 bp | CTCCATGGGGCACTGCTGGTATGGTGGCCGGGGCTCCTGGACAGTCGCATTACTTCCCGAGAAAGACACTaGACAGTCCTCTGCGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHGALLVWWPGLLDSRITSRERH*TVLCVP Trigger: TGGCACGCAGAGGACTGTGCAGTGTCTTTCTCGGGA...AGTAATGCGACTGTCCAGGAGCCCCGGCCACCATACCAGCAGTGCCCCATGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS-3UTR CCA 90 bp | AGAATAATGGAGACGCCAGTTAAAGCAGTGAGCAGTGCTGACGGAAAGGCTAGAGCCGCCAATGCCGCCTaGCCGCCAACAGCGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: RIMETPVKAVSSADGKARAANAA*PPTAPR Trigger: CCGTGGCGCTGTTGGCGGCCAGGCGGCATTGGCGGC...TCTAGCCTTTCCGTCAGCACTGCTCACTGCTTTAACTGGCGTCTCCATTATTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR GCA 90 bp | TCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGCCCAGGCGATGCGCATaGCTTTCCCACCACCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLPLLRNKQEAVEPPAQPRRCA*LSHHRL Trigger: CAGGCGGTGGTGGGAAAGGCATGCGCATCGCCTGGG...CTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR GCA 90 bp | AGAATAATGGAGACGCCAGTTAAAGCAGTGAGCAGTGCTGACGGAAAGGCTAGACCCAGGCGATGCGCATaGCTTTCCCACCACCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RIMETPVKAVSSADGKARPRRCA*LSHHRL Trigger: CAGGCGGTGGTGGGAAAGGCATGCGCATCGCCTGGG...TCTAGCCTTTCCGTCAGCACTGCTCACTGCTTTAACTGGCGTCTCCATTATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGGCACTGCTGGTATGGTGGCCGGGGCTCCTGGACAGTCGCATTACTGTGGACTGTGCCAAGAAACTaGATGCTCATGTTTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: MGHCWYGGRGSWTVALLWTVPRN*MLMFPP Trigger: AGGTGGAAACATGAGCATCCAGTTTCTTGGCACAGT...CCACAGTAATGCGACTGTCCAGGAGCCCCGGCCACCATACCAGCAGTGCCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS-3UTR TCA 90 bp | TTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCCGCCTGCTGAGGCCTTaGTCATCACAGGGTAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPLLRNKQEAVEPPAQECRLLRP*SSQGSQ Trigger: TTGGCTACCCTGTGATGATCAAGGCCTCAGCAGGCG...GCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR TCA 90 bp | AGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAATGCCGCCTGCTGAGGCCTTaGTCATCACAGGGTAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RNKQEAVEPPAQECSCKCRLLRP*SSQGSQ Trigger: TTGGCTACCCTGTGATGATCAAGGCCTCAGCAGGCG...GCATTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGGCTAGAAATACTTCATTCCAGCTCCACAAGCAGGTCTCCTTCACCAACTCCCACCACCGCCTGCTaGGGCCTTGATCATCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERLEILHSSSTSRSPSPTPTTAC*GLDHHR Trigger: CCTGTGATGATCAAGGCCTCAGCAGGCGGTGGTGGG...AGTTGGTGAAGGAGACCTGCTTGTGGAGCTGGAATGAAGTATTTCTAGCCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177312.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCCACTGGGCTGGGGGCTGGGCCCACCACGTCAGTCTGGGTCCTCTCTTTCATACAGATGATGCAATaGCCAATAACTGGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSTGLGAGPTTSVWVLSFIQMMQ*PITGFS Trigger: AGAGAAACCAGTTATTGGCCATTGCATCATCTGTAT...GAAAGAGAGGACCCAGACTGACGTGGTGGGCCCAGCCCCCAGCCCAGTGGACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147018.2 |
||
| CDS-3UTR TCA 90 bp | TTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCAGCACTCCCTCTCATTaGGCCACAGAGCATTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPLLRNKQEAVEPPAQECSTPSH*ATEHCH Trigger: ATGGCAATGCTCTGTGGCTCAATGAGAGGGAGTGCT...GCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR GCA 90 bp | AGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAATGCTCCCGAGAAAGACACTaGACAGTCCTCTGCGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RNKQEAVEPPAQECSCKCSRERH*TVLCVP Trigger: TGGCACGCAGAGGACTGTGCAGTGTCTTTCTCGGGA...GCATTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGCAGAATGTCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCATGTCTCCAGGCTTaGCAGAAACGGCCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VGRMSVLPLLRNKQEAVEPCLQA*QKRPPP Trigger: TGGTGGTGGCCGTTTCTGTCAAGCCTGGAGACATGG...TTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGACATTCTGCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR GCA 90 bp | ACCAACTGTGTCTCCAGCTTTGCAGTGCACCAATTTCACCTTGCCCATTTTCCCCACTGCACAGTCCTCTaGGTGCCATCAACGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: TNCVSSFAVHQFHLAHFPHCTVL*VPSTLT Trigger: TGTCAACGTTGATGGCACGCAGAGGACTGTGCAGTG...GGGAAAATGGGCAAGGTGAAATTGGTGCACTGCAAAGCTGGAGACACAGTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAAAGATGTATCGGCTCTTaGTACTGGGACAGCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRNKQEAVEPPAQECSCKRCIGS*YWDSLP Trigger: TGGGAGGCTGTCCCAGTACCAAGAGCCGATACATCT...TTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR TCA 90 bp | AAGGCTAGAAATACTTCATTCCAGCTCCACAAGCAGGTCTCCTTCACCAACTGTTCATGTCTCCAGGCTTaGCAGAAACGGCCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KARNTSFQLHKQVSFTNCSCLQA*QKRPPP Trigger: TGGTGGTGGCCGTTTCTGTCAAGCCTGGAGACATGA...ACAGTTGGTGAAGGAGACCTGCTTGTGGAGCTGGAATGAAGTATTTCTAGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS-3UTR GCA 90 bp | TCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGAACCCGACATTCAACTaGCCAGCCACTGATGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLPLLRNKQEAVEPPAQNPTFN*PATDGN Trigger: ATTCCCATCAGTGGCTGGGCAGTTGAATGTCGGGTT...CTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR GCA 90 bp | AGAATAATGGAGACGCCAGTTAAAGCAGTGAGCAGTGCTGACGGAAAGGCTAGACACTGCACAGTCCTCTaGGTGCCATCAACGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RIMETPVKAVSSADGKARHCTVL*VPSTLT Trigger: TGTCAACGTTGATGGCACGCAGAGGACTGTGCAGTG...TCTAGCCTTTCCGTCAGCACTGCTCACTGCTTTAACTGGCGTCTCCATTATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000152383.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAAGCTCATGTTTCCACCTaGTTCCCGAGAAAGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LRNKQEAVEPPAQECSCKAHVST*FPRKTL Trigger: CAGTGTCTTTCTCGGGAAGCAGGTGGAAACATGAGC...TTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGCAGAATGTCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAATTTACTGGTGGGAGCTaGGCCAACACAGACAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGRMSVLPLLRNKQEAVEFTGGS*ANTDSL Trigger: GAGGCTGTCTGTGTTGGCCCAGCTCCCACCAGTAAA...TTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGACATTCTGCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| 3UTR CAA 72 bp | ACAAGCAGGTCTCCTTCACCAACTGTGTCTCCAGCTTaGCAGTGCACCAATTTCACCTTGCCCATTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSRSPSPTVSPA*QCTNFTLPIFP Trigger: TGGGAAAATGGGCAAGGTGAAATTGGTGCACTGCAAAGCTGGAGACACAGTTGGTGAAGGAGACCTGCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152383.8 ENSMUST00000177312.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAAGAATGGCAACTGTCTTaGTGCCCATCTTCTTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRNKQEAVEPPAQECSCKEWQLS*CPSSCK Trigger: CTTGCAAGAAGATGGGCATCAAGACAGTTGCCATTC...TTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR TCA 90 bp | TTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCATCACACAGATTTCCTaGCCTTCTGCTACCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLLRNKQEAVEPPAQECITQIS*PSATMS Trigger: AGACATGGTAGCAGAAGGTCAGGAAATCTGTGTGAT...GCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR GCA 90 bp | AGAATAATGGAGACGCCAGTTAAAGCAGTGAGCAGTGCTGACGGAAAGGCTAGAGCTCATGTTTCCACCTaGTTCCCGAGAAAGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: RIMETPVKAVSSADGKARAHVST*FPRKTL Trigger: CAGTGTCTTTCTCGGGAAGCAGGTGGAAACATGAGC...TCTAGCCTTTCCGTCAGCACTGCTCACTGCTTTAACTGGCGTCTCCATTATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000152383.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAAGCACCAATTTCACCTTaGCCATTTTCCCAGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRNKQEAVEPPAQECSCKAPISP*PFSQLS Trigger: TGACAGCTGGGAAAATGGGCAAGGTGAAATTGGTGC...TTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CCA 90 bp | GGAAAGGCTAGAAATACTTCATTCCAGCTCCACAAGCAGGTCTCCTTCACCAACTCCTCTACCACCTTCTaGTTCCTTCTCTGGATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GKARNTSFQLHKQVSFTNSSTTF*FLLWIE Trigger: CTCGATCCAGAGAAGGAACCAGAAGGTGGTAGAGGA...GTTGGTGAAGGAGACCTGCTTGTGGAGCTGGAATGAAGTATTTCTAGCCTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177312.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGCAGAATGTCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAAATCGGCTCTTGGTACTaGGACAGCCTCCCAATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VGRMSVLPLLRNKQEAVEIGSWY*DSLPID Trigger: GTCTATTGGGAGGCTGTCCCAGTACCAAGAGCCGAT...TTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGACATTCTGCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CCA 90 bp | GTGAGCAGTGCTGACGGAAAGGCTAGAAATACTTCATTCCAGCTCCACAAGCAGCCAGGTTCCACGTACTaGTCACATTTAGTTTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSSADGKARNTSFQLHKQPGSTY*SHLVSS Trigger: GCTCGAAACTAAATGTGACCAGTACGTGGAACCTGG...CTGCTTGTGGAGCTGGAATGAAGTATTTCTAGCCTTTCCGTCAGCACTGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS-3UTR TCA 90 bp | TCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGCATATTCCACAGAACTaGGACTTCTGGACACCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SVLPLLRNKQEAVEPPAQHIPQN*DFWTPL Trigger: TAGTGGTGTCCAGAAGTCTCAGTTCTGTGGAATATG...CTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR TCA 90 bp | TTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCAAACTCTTTGTTTTCTaGCAGGAATCCATACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLLRNKQEAVEPPAQECKLFVF*QESIPW Trigger: CCAGGGTATGGATTCCTGTCAGAAAACAAAGAGTTT...GCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR TCA 90 bp | GTGTCTCCAGCTTTGCAGTGCACCAATTTCACCTTGCCCATTTTCCCAGCTGTCAAACTCTTTGTTTTCTaGCAGGAATCCATACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSPALQCTNFTLPIFPAVKLFVF*QESIPW Trigger: CCAGGGTATGGATTCCTGTCAGAAAACAAAGAGTTT...GACAGCTGGGAAAATGGGCAAGGTGAAATTGGTGCACTGCAAAGCTGGAGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177312.8 |
||
| CDS-3UTR TCA 90 bp | GCTAGAAATACTTCATTCCAGCTCCACAAGCAGGTCTCCTTCACCAACTGTGTCAACCAGGGATTGTGTTaGCCTTTGCTCTCTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ARNTSFQLHKQVSFTNCVNQGLC*PLLSWL Trigger: TAGCCAAGAGAGCAAAGGTCAACACAATCCCTGGTT...GACACAGTTGGTGAAGGAGACCTGCTTGTGGAGCTGGAATGAAGTATTTCTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177312.8 |
||
| CDS-3UTR TCA 90 bp | ACCAACTGTGTCTCCAGCTTTGCAGTGCACCAATTTCACCTTGCCCATTTTCCCTTTCCCTTGCAATTCTaGCAGCTTCATCTGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TNCVSSFAVHQFHLAHFPFPLQF*QLHLHP Trigger: AGGATGCAGATGAAGCTGTCAGAATTGCAAGGGAAA...GGGAAAATGGGCAAGGTGAAATTGGTGCACTGCAAAGCTGGAGACACAGTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177312.8 |
||
| CDS-3UTR TCA 90 bp | CTTCATTCCAGCTCCACAAGCAGGTCTCCTTCACCAACTGTGTCTCCAGCTTTGAATAACTGGTACTCTTaGATGTTCTTGGAAGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHSSSTSRSPSPTVSPALNNWYS*MFLEAL Trigger: CAGCGCTTCCAAGAACATTCAAGAGTACCAGTTATT...CAAAGCTGGAGACACAGTTGGTGAAGGAGACCTGCTTGTGGAGCTGGAATGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS-3UTR TCA 90 bp | GTGCACCAATTTCACCTTGCCCATTTTCCCAGCTGTCATACTGTTCTGCATTTTGCGTGCCATCAACGTTaGCAGACAATAAGGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: VHQFHLAHFPSCHTVLHFACHQR*QTIRVT Trigger: CGTCACCCTTATTGTCTGTCAACGTTGATGGCACGC...AAAATGCAGAACAGTATGACAGCTGGGAAAATGGGCAAGGTGAAATTGGTGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS-3UTR TCA 90 bp | CAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTCTTCTGAGACATGTCTCCAGGCTTaGCAGAAACGGCCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QEFPLVICWQNVGFASSETCLQA*QKRPPP Trigger: TGGTGGTGGCCGTTTCTGTCAAGCCTGGAGACATGT...CTCAGAAGAGGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132444.2 |
||
| CDS-3UTR GCA 90 bp | TCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGTCTGACAGCTTCATCTaGATCCTTTACTACCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SVLPLLRNKQEAVEPPAQSDSFI*ILYYPI Trigger: GATGGGGTAGTAAAGGATGCAGATGAAGCTGTCAGA...CTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGCAGTGCTGACGGAAAGGCTAGAAATACTTCATTCCAGCTCCACAAGCAGTCTGACAGCTTCATCTaGATCCTTTACTACCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: VSSADGKARNTSFQLHKQSDSFI*ILYYPI Trigger: GATGGGGTAGTAAAGGATGCAGATGAAGCTGTCAGA...CTGCTTGTGGAGCTGGAATGAAGTATTTCTAGCCTTTCCGTCAGCACTGCTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177312.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAAGCACTTTGTACACTGTaGCAAGAAACTGGATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRNKQEAVEPPAQECSCKALCTL*QETGCS Trigger: TGAGCATCCAGTTTCTTGGCACAGTGTACAAAGTGC...TTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR CCA 90 bp | AGAATAATGGAGACGCCAGTTAAAGCAGTGAGCAGTGCTGACGGAAAGGCTAGACCAGGTTCCACGTACTaGTCACATTTAGTTTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RIMETPVKAVSSADGKARPGSTY*SHLVSS Trigger: GCTCGAAACTAAATGTGACCAGTACGTGGAACCTGG...TCTAGCCTTTCCGTCAGCACTGCTCACTGCTTTAACTGGCGTCTCCATTATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000152383.8 |
||
| CDS-3UTR CCA 90 bp | TCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGACTGTGCCAAGAAACTaGATGCTCATGTTTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SVLPLLRNKQEAVEPPAQTVPRN*MLMFPP Trigger: AGGTGGAAACATGAGCATCCAGTTTCTTGGCACAGT...CTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR CCA 90 bp | AGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAATGCACTGTGCCAAGAAACTaGATGCTCATGTTTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RNKQEAVEPPAQECSCKCTVPRN*MLMFPP Trigger: AGGTGGAAACATGAGCATCCAGTTTCTTGGCACAGT...GCATTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTGTTTTCCTGGCACGGGAATATAGGAAGAGAGGAGATGCCAAGGCTTCTGGCTCTGCAGCAAGCTTaGTTAAAATGTGCACTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AVFSWHGNIGREEMPRLLALQQA*LKCALC Trigger: ACAAAGTGCACATTTTAACCAAGCTTGCTGCAGAGC...CAGAAGCCTTGGCATCTCCTCTCTTCCTATATTCCCGTGCCAGGAAAACACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGCAGAATGTCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAAAACCAGGGATTGTGTTaGCCTTTGCTCTCTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VGRMSVLPLLRNKQEAVENQGLC*PLLSWL Trigger: TAGCCAAGAGAGCAAAGGTCAACACAATCCCTGGTT...TTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGACATTCTGCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR TCA 90 bp | TATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCCCCACCACCGCCTGCTaGGGCCTTGATCATCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: YLYQEFPLVICWQNVGFAPTTAC*GLDHHR Trigger: CCTGTGATGATCAAGGCCTCAGCAGGCGGTGGTGGG...GGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR TCA 90 bp | CAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTCTTCTGAGAGCACTCCCTCTCATTaGGCCACAGAGCATTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QEFPLVICWQNVGFASSESTPSH*ATEHCH Trigger: ATGGCAATGCTCTGTGGCTCAATGAGAGGGAGTGCT...CTCAGAAGAGGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAAAATAACTGGTACTCTTaGATGTTCTTGGAAGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRNKQEAVEPPAQECSCKNNWYS*MFLEAL Trigger: CAGCGCTTCCAAGAACATTCAAGAGTACCAGTTATT...TTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000152383.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGTCTCCAGCTTTGCAGTGCACCAATTTCACCTTGCCCATTTTCCCAGCTGGATGCCACGACAGTATaGTCTTCATCATGTAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCLQLCSAPISPCPFSQLDATTV*SSSCNF Trigger: AAAGTTACATGATGAAGATCATACTGTCGTGGCATC...CAGCTGGGAAAATGGGCAAGGTGAAATTGGTGCACTGCAAAGCTGGAGACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTCTCCAGCTTTGCAGTGCACCAATTTCACCTTGCCCATTTTCCCAGCTGTGCACTTTTTCAAGCATaGATTTGTTCAGCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CVSSFAVHQFHLAHFPSCALFQA*ICSALQ Trigger: CTGCAGAGCTGAACAAATTCATGCTTGAAAAAGTGC...ACAGCTGGGAAAATGGGCAAGGTGAAATTGGTGCACTGCAAAGCTGGAGACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS-3UTR GCA 90 bp | GTATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCCCAGCAATTGCTGCTaGGAGGACCGCCGCCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: VFISRISIGDLLAECRFCPSNCC*EDRRQC Trigger: GCATTGGCGGCGGTCCTCGCAGCAGCAATTGCTGGG...GCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR GCA 90 bp | TGTGTCTCCAGCTTTGCAGTGCACCAATTTCACCTTGCCCATTTTCCCAGCTGTGTAGCCAATTTCCCTTaGAATTCTGACAGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: CVSSFAVHQFHLAHFPSCVANFP*NSDSFI Trigger: GATGAAGCTGTCAGAATTGCAAGGGAAATTGGCTAC...ACAGCTGGGAAAATGGGCAAGGTGAAATTGGTGCACTGCAAAGCTGGAGACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177312.8 |
||
| CDS-3UTR TCA 90 bp | AGAATAATGGAGACGCCAGTTAAAGCAGTGAGCAGTGCTGACGGAAAGGCTAGAGATCATAATAGATGCTaGTGTCACTTCCTGGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RIMETPVKAVSSADGKARDHNRC*CHFLVG Trigger: TCCAACCAGGAAGTGACATCAGCATCTATTATGATC...TCTAGCCTTTCCGTCAGCACTGCTCACTGCTTTAACTGGCGTCTCCATTATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR GCA 90 bp | ATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTCTTCTCCCGAGAAAGACACTaGACAGTCCTCTGCGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISRISIGDLLAECRFCLFSRERH*TVLCVP Trigger: TGGCACGCAGAGGACTGTGCAGTGTCTTTCTCGGGA...GAAGAGGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAAAGCTTGGTTAAAATGTaGACTTTGTACACTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRNKQEAVEPPAQECSCKSLVKM*TLYTVP Trigger: TGGCACAGTGTACAAAGTGCACATTTTAACCAAGCT...TTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR CCA 90 bp | TATTTACAGTCAATTGGCACAGCCTGTCGCCTCTGTGTATATTGTCTTCATTCGATGTCACTTCCTGGTTaGATGCCACTGTCAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: YLQSIGTACRLCVYCLHSMSLPG*MPLSTR Trigger: CCGAGTTGACAGTGGCATCCAACCAGGAAGTGACAT...CGAATGAAGACAATATACACAGAGGCGACAGGCTGTGCCAATTGACTGTAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR TCA 90 bp | TCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGACCTGGATTTCTATATaGCGAGGGTTATCGATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLPLLRNKQEAVEPPAQTWISI*RGLSIN Trigger: ATTTATCGATAACCCTCGTCATATAGAAATCCAGGT...CTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGCAGAATGTCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAAGCACTTTTTCAAGCATaGATTTGTTCAGCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGRMSVLPLLRNKQEAVEALFQA*ICSALQ Trigger: CTGCAGAGCTGAACAAATTCATGCTTGAAAAAGTGC...TTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGACATTCTGCCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAATCTTGGCTAATAGTTTaGTTTCTATCTTGTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRNKQEAVEPPAQECSCKSWLIV*FLSCHP Trigger: TGGGTGACAAGATAGAAAGCAAACTATTAGCCAAGA...TTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR GCA 90 bp | AATATTTACAGTCAATTGGCACAGCCTGTCGCCTCTGTGTATATTGTCTTCATTCACTTCCTGGTTGGATaGCACTGTCAACTCGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: NIYSQLAQPVASVYIVFIHFLVG*HCQLGH Trigger: GTGTCCGAGTTGACAGTGGCATCCAACCAGGAAGTG...AATGAAGACAATATACACAGAGGCGACAGGCTGTGCCAATTGACTGTAAATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR GCA 90 bp | ATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTCTTCCACTGCACAGTCCTCTaGGTGCCATCAACGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ISRISIGDLLAECRFCLFHCTVL*VPSTLT Trigger: TGTCAACGTTGATGGCACGCAGAGGACTGTGCAGTG...GAAGAGGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR GCA 90 bp | GCTAGAAATACTTCATTCCAGCTCCACAAGCAGGTCTCCTTCACCAACTGTGTCAGCTTGGTTAAAATGTaGACTTTGTACACTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARNTSFQLHKQVSFTNCVSLVKM*TLYTVP Trigger: TGGCACAGTGTACAAAGTGCACATTTTAACCAAGCT...GACACAGTTGGTGAAGGAGACCTGCTTGTGGAGCTGGAATGAAGTATTTCTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS-3UTR CCA 90 bp | GAAATGCTAATATTTACAGTCAATTGGCACAGCCTGTCGCCTCTGTGTATATTGCCTGGGTGTACAGCTTaGGCCCTGGTTTTCTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: EMLIFTVNWHSLSPLCILPGCTA*ALVFLM Trigger: CATTAAGAAAACCAGGGCCCAAGCTGTACACCCAGG...CAATATACACAGAGGCGACAGGCTGTGCCAATTGACTGTAAATATTAGCATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CCA 90 bp | GTTGGCAGAATGTCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAAGCTCTGCAGCAAGCTTaGTTAAAATGTGCACTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGRMSVLPLLRNKQEAVEALQQA*LKCALC Trigger: ACAAAGTGCACATTTTAACCAAGCTTGCTGCAGAGC...TTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGACATTCTGCCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTCTTCTGAGGCACTTTGTACACTGTaGCAAGAAACTGGATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QEFPLVICWQNVGFASSEALCTL*QETGCS Trigger: TGAGCATCCAGTTTCTTGGCACAGTGTACAAAGTGC...CTCAGAAGAGGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR TCA 90 bp | GAAATGCTAATATTTACAGTCAATTGGCACAGCCTGTCGCCTCTGTGTATATTGTTAACGTGTGCCCTTTaGAGCCATCAGGATACACAT | + |
|
Preference number: 4 (lower is better) Translates to: EMLIFTVNWHSLSPLCILLTCAL*SHQDTH Trigger: ATGTGTATCCTGATGGCTTCAAAGGGCACACGTTAA...CAATATACACAGAGGCGACAGGCTGTGCCAATTGACTGTAAATATTAGCATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR TCA 90 bp | GTATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCGCGTGCCATCAACGTTaGCAGACAATAAGGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: VFISRISIGDLLAECRFCACHQR*QTIRVT Trigger: CGTCACCCTTATTGTCTGTCAACGTTGATGGCACGC...GCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR TCA 90 bp | TATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCGCGTGCCATCAACGTTaGCAGACAATAAGGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: YLYQEFPLVICWQNVGFAACHQR*QTIRVT Trigger: CGTCACCCTTATTGTCTGTCAACGTTGATGGCACGC...GGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR GCA 90 bp | ATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTCTTCCTGTGTCTCCAGCTTTaGAGTGCACCAATTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ISRISIGDLLAECRFCLFLCLQL*SAPISP Trigger: AGGTGAAATTGGTGCACTGCAAAGCTGGAGACACAG...GAAGAGGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CCA 90 bp | TATTTACAGTCAATTGGCACAGCCTGTCGCCTCTGTGTATATTGTCTTCATTCGTCACGTGAACAGAACTaGCATCAACATCACTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YLQSIGTACRLCVYCLHSSREQN*HQHHCE Trigger: TTCACAGTGATGTTGATGCCAGTTCTGTTCACGTGA...CGAATGAAGACAATATACACAGAGGCGACAGGCTGTGCCAATTGACTGTAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CCA 90 bp | GTATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCGGTAGCTTTTACTGGTaGGAGCTGGGCCAACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFISRISIGDLLAECRFCGSFYW*ELGQHR Trigger: TCTGTGTTGGCCCAGCTCCCACCAGTAAAAGCTACC...GCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR TCA 90 bp | AATATTTACAGTCAATTGGCACAGCCTGTCGCCTCTGTGTATATTGTCTTCATTTTTCCCTTGCAATTCTaGCAGCTTCATCTGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: NIYSQLAQPVASVYIVFIFPLQF*QLHLHP Trigger: AGGATGCAGATGAAGCTGTCAGAATTGCAAGGGAAA...AATGAAGACAATATACACAGAGGCGACAGGCTGTGCCAATTGACTGTAAATATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CCA 90 bp | TATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTCCTCTACCACCTTCTaGTTCCTTCTCTGGATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: YLYQEFPLVICWQNVGFASSTTF*FLLWIE Trigger: CTCGATCCAGAGAAGGAACCAGAAGGTGGTAGAGGA...GGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR CCA 90 bp | GTATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCGCTGATGTCACTTCCTaGTTGGATGCCACTGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VFISRISIGDLLAECRFCADVTS*LDATVN Trigger: GTTGACAGTGGCATCCAACCAGGAAGTGACATCAGC...GCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR TCA 90 bp | TATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTCACAAAACGTGTGTTaGTTATCACCTCCCGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YLYQEFPLVICWQNVGFASQNVC*LSPPGA Trigger: TGCTCCGGGAGGTGATAATCAACACACGTTTTGTGA...GGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR GCA 90 bp | CAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTCTTCTGAGTCTTGGCTAATAGTTTaGTTTCTATCTTGTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: QEFPLVICWQNVGFASSESWLIV*FLSCHP Trigger: TGGGTGACAAGATAGAAAGCAAACTATTAGCCAAGA...CTCAGAAGAGGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR CCA 90 bp | ATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTCTTCACAAGGATCATTTCTTaGACTAAGTCCAGGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ISRISIGDLLAECRFCLFTRIIS*TKSRPV Trigger: TACTGGCCTGGACTTAGTCCAAGAAATGATCCTTGT...GAAGAGGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CCA 90 bp | AATATTTACAGTCAATTGGCACAGCCTGTCGCCTCTGTGTATATTGTCTTCATTGCTCTGCAGCAAGCTTaGTTAAAATGTGCACTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NIYSQLAQPVASVYIVFIALQQA*LKCALC Trigger: ACAAAGTGCACATTTTAACCAAGCTTGCTGCAGAGC...AATGAAGACAATATACACAGAGGCGACAGGCTGTGCCAATTGACTGTAAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR TCA 90 bp | TATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCGCATCAACATCACTGTaGATGGCAACTGTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: YLYQEFPLVICWQNVGFAASTSL*MATVLM Trigger: CATCAAGACAGTTGCCATTCACAGTGATGTTGATGC...GGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR TCA 90 bp | AATATTTACAGTCAATTGGCACAGCCTGTCGCCTCTGTGTATATTGTCTTCATTGATGCCACGACAGTATaGTCTTCATCATGTAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: NIYSQLAQPVASVYIVFIDATTV*SSSCNF Trigger: AAAGTTACATGATGAAGATCATACTGTCGTGGCATC...AATGAAGACAATATACACAGAGGCGACAGGCTGTGCCAATTGACTGTAAATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR GCA 90 bp | ATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTCTTCAGCTTGGTTAAAATGTaGACTTTGTACACTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISRISIGDLLAECRFCLFSLVKM*TLYTVP Trigger: TGGCACAGTGTACAAAGTGCACATTTTAACCAAGCT...GAAGAGGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR TCA 90 bp | ATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTCTTCACCTGGATTTCTATATaGCGAGGGTTATCGATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ISRISIGDLLAECRFCLFTWISI*RGLSIN Trigger: ATTTATCGATAACCCTCGTCATATAGAAATCCAGGT...GAAGAGGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR TCA 90 bp | TATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCGCACTTTTTCAAGCATaGATTTGTTCAGCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YLYQEFPLVICWQNVGFAALFQA*ICSALQ Trigger: CTGCAGAGCTGAACAAATTCATGCTTGAAAAAGTGC...GGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR GCA 90 bp | TATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCGTAGCCAATTTCCCTTaGAATTCTGACAGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: YLYQEFPLVICWQNVGFAVANFP*NSDSFI Trigger: GATGAAGCTGTCAGAATTGCAAGGGAAATTGGCTAC...GGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR CCA 90 bp | ATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTCTTCATACAGATGATGCAATaGCCAATAACTGGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISRISIGDLLAECRFCLFIQMMQ*PITGFS Trigger: AGAGAAACCAGTTATTGGCCATTGCATCATCTGTAT...GAAGAGGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS GCA 90 bp | TGCTTCAGCGTCCCCAGCAATTGCTGCTGCGAGGACCGCCGCCAATaGCGCCTGGCCGCCAACAGCGCCACGGTCCTGACCCACTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: CFSVPSNCCCEDRRQ*RLAANSATVLTHCP Trigger: GGGGCAGTGGGTCAGGACCGTGGCGCTGTTGGCGGCCAGGCGGCATTGGCGGCGGTCCTCGCAGCAGCAATTGCTGGGGACGCTGAAGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000135578.8 ENSMUST00000154206.8 |
||
| CDS TCA 90 bp | ACGGCCGCTCTTGACTCATTTCACCTGGCATCATGTCTCCAGGCTTaGCAGAAACGGCCACCACCACTCCAGGCATCGGGGAGCACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TAALDSFHLASCLQA*QKRPPPLQASGSTE Trigger: CTCTGTGCTCCCCGATGCCTGGAGTGGTGGTGGCCGTTTCTGTCAAGCCTGGAGACATGATGCCAGGTGAAATGAGTCAAGAGCGGCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTCCTGGACAGTCGCATTACTGTGGCTGTGCTGGCCAATGCCACAGAAGGGGTGCTGCTGGTGTCCTaGGGCACTTTTTCAAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GLLDSRITVAVLANATEGVLLVS*GTFSSM Trigger: CATGCTTGAAAAAGTGCCCAAGGACACCAGCAGCAC...CCCTTCTGTGGCATTGGCCAGCACAGCCACAGTAATGCGACTGTCCAGGAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS GCA 90 bp | CGGCCTGCTCTCCCATTGCTTGGCGAGTTTCAGGATCCAGAAAAATaGTTGGCGCCTCCTCTACCACCTTCTGGTTCCTTCTCTGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: RPALPLLGEFQDPEK*LAPPLPPSGSFSGS Trigger: CGATCCAGAGAAGGAACCAGAAGGTGGTAGAGGAGGCGCCAAGCATTTTTCTGGATCCTGAAACTCGCCAAGCAATGGGAGAGCAGGCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CAA 90 bp | CATGGGGCACTGCTGGTATGGTGGCCGGGGCTCCTGGACAGTCGCATTACTGTGAGCTCTGCAGCAAGCTaGGTTAAAATGTGCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HGALLVWWPGLLDSRITVSSAAS*VKMCTL Trigger: CAAAGTGCACATTTTAACCAAGCTTGCTGCAGAGCT...CACAGTAATGCGACTGTCCAGGAGCCCCGGCCACCATACCAGCAGTGCCCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS TCA 90 bp | CTTCCCGAGAAAGACACTGCACAGTCCTCTGCGTGCCATCAACGTTaGCAGACAATAAGGGTGACGCCAGGTTCCACGTACTGGTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LPEKDTAQSSACHQR*QTIRVTPGSTYWSH Trigger: ATGTGACCAGTACGTGGAACCTGGCGTCACCCTTATTGTCTGTCAACGTTGATGGCACGCAGAGGACTGTGCAGTGTCTTTCTCGGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000152383.8 |
||
| CDS GCA 90 bp | ACCGAAAGACTTGTAGGGGTCCTCAGCATAAACCCGACATTCAACTaGCCAGCCACTGATGGGAATATCCTCTTGCTTGTGCCTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TERLVGVLSINPTFN*PATDGNILLLVPEW Trigger: CCACTCAGGCACAAGCAAGAGGATATTCCCATCAGTGGCTGGGCAGTTGAATGTCGGGTTTATGCTGAGGACCCCTACAAGTCTTTCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS CCA 90 bp | AGAAAAATGCTTGGCGCCTCCTCTACCACCTTCTGGTTCCTTCTCTaGATCGAGCACTCCCTCTCATTGAGCCACAGAGCATTGCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: RKMLGASSTTFWFLL*IEHSLSLSHRALPC Trigger: ACATGGCAATGCTCTGTGGCTCAATGAGAGGGAGTGCTCGATCCAGAGAAGGAACCAGAAGGTGGTAGAGGAGGCGCCAAGCATTTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS CCA 90 bp | TGGATGCCACTGTCAACTCGGACACCAGGTAGATGTATCGGCTCTTaGTACTGGGACAGCCTCCCAATAGACGGTAAACCGAAAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: WMPLSTRTPGRCIGS*YWDSLPIDGKPKDL Trigger: CAAGTCTTTCGGTTTACCGTCTATTGGGAGGCTGTCCCAGTACCAAGAGCCGATACATCTACCTGGTGTCCGAGTTGACAGTGGCATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CAA 90 bp | CTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAATACATGTCTCCAGGCTaGACAGAAACGGCCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: LRNKQEAVEPPAQECSCKYMSPG*TETATT Trigger: GGTGGTGGCCGTTTCTGTCAAGCCTGGAGACATGTA...TTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132444.2 |
||
| CDS-3UTR CAA 90 bp | ACCAACTGTGTCTCCAGCTTTGCAGTGCACCAATTTCACCTTGCCCATTTTCCCATCATGTCTCCAGGCTaGACAGAAACGGCCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: TNCVSSFAVHQFHLAHFPIMSPG*TETATT Trigger: GGTGGTGGCCGTTTCTGTCAAGCCTGGAGACATGAT...GGGAAAATGGGCAAGGTGAAATTGGTGCACTGCAAAGCTGGAGACACAGTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS CCA 90 bp | TTCCATGATGGCATCCATGTTGAGGTAGCTTTTACTGGTGGGAGCTaGGCCAACACAGACAGCCTCATCCGCCATTTTCACGTGAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: FHDGIHVEVAFTGGS*ANTDSLIRHFHVNR Trigger: TCTGTTCACGTGAAAATGGCGGATGAGGCTGTCTGTGTTGGCCCAGCTCCCACCAGTAAAAGCTACCTCAACATGGATGCCATCATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS CCA 90 bp | TTCCATGATGGCATCCATGTTGAGGTAGCTTTTACTGGTGGGAGCTaGGCCAACACAGACAGCCTCATCCGCCATTTTCACGTGAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: FHDGIHVEVAFTGGS*ANTDSLIRHFHVNL Trigger: AAGGTTCACGTGAAAATGGCGGATGAGGCTGTCTGTGTTGGCCCAGCTCCCACCAGTAAAAGCTACCTCAACATGGATGCCATCATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154206.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCTGTTCAGGTGGTGGGCTGTGTTTTCCTGGCACGGGAATATAGGAAGAGATGCGTGCCATCAACGTaGACAGACAATAAGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SAVQVVGCVFLAREYRKRCVPST*TDNKGD Trigger: GTCACCCTTATTGTCTGTCAACGTTGATGGCACGCA...TCTCTTCCTATATTCCCGTGCCAGGAAAACACAGCCCACCACCTGAACAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAAGTGCTGCTGGTGTCCTaGGGCACTTTTTCAAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: LRNKQEAVEPPAQECSCKVLLVS*GTFSSM Trigger: CATGCTTGAAAAAGTGCCCAAGGACACCAGCAGCAC...TTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGCAGAATGTCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAAACCATGTCTCCAGGCTaGACAGAAACGGCCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: VGRMSVLPLLRNKQEAVETMSPG*TETATT Trigger: GGTGGTGGCCGTTTCTGTCAAGCCTGGAGACATGGT...TTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGACATTCTGCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS TCA 90 bp | GTGGGAGCTGGGCCAACACAGACAGCCTCATCCGCCATTTTCACGTaGACCTTTTCTTTAGGCTCATATTCCACAGAACTGAGACTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGAGPTQTASSAIFT*TFSLGSYSTELRLL Trigger: CAGAAGTCTCAGTTCTGTGGAATATGAGCCTAAAGAAAAGGTTCACGTGAAAATGGCGGATGAGGCTGTCTGTGTTGGCCCAGCTCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154206.8 |
||
| CDS-3UTR CAA 90 bp | GGAAAGGCTAGAAATACTTCATTCCAGCTCCACAAGCAGGTCTCCTTCACCAACCCCTGGGTGTACAGCTaGGGCCCTGGTTTTCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: GKARNTSFQLHKQVSFTNPWVYS*GPGFLN Trigger: ATTAAGAAAACCAGGGCCCAAGCTGTACACCCAGGG...GTTGGTGAAGGAGACCTGCTTGTGGAGCTGGAATGAAGTATTTCTAGCCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177312.8 |
||
| CDS-3UTR CAA 90 bp | TCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGATGGGAATATCCTCTaGCTTGTGCCTGAGTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SVLPLLRNKQEAVEPPAQDGNIL*LVPEWV Trigger: TACCCACTCAGGCACAAGCAAGAGGATATTCCCATC...CTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CAA 90 bp | AGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAATGCTGCGTGCCATCAACGTaGACAGACAATAAGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RNKQEAVEPPAQECSCKCCVPST*TDNKGD Trigger: GTCACCCTTATTGTCTGTCAACGTTGATGGCACGCA...GCATTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR CAA 90 bp | TCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGTGCGTGCCATCAACGTaGACAGACAATAAGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SVLPLLRNKQEAVEPPAQCVPST*TDNKGD Trigger: GTCACCCTTATTGTCTGTCAACGTTGATGGCACGCA...CTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAATGCACCAATTTCACCTaGCCCATTTTCCCAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LRNKQEAVEPPAQECSCKCTNFT*PIFPAV Trigger: GACAGCTGGGAAAATGGGCAAGGTGAAATTGGTGCA...TTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS CCA 90 bp | AGCGCTGAGCTCGTAGCTGGGATGCCACAAATACAGATGATGCAATaGCCAATAACTGGTTTCTCTCACTCAGTGTTAACGTGTGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SAELVAGMPQIQMMQ*PITGFSHSVLTCAL Trigger: AAGGGCACACGTTAACACTGAGTGAGAGAAACCAGTTATTGGCCATTGCATCATCTGTATTTGTGGCATCCCAGCTACGAGCTCAGCGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CAA 90 bp | CTTCATTCCAGCTCCACAAGCAGGTCTCCTTCACCAACTGTGTCTCCAGCTTTGTTGAGCCACAGAGCATaGCCATGTTTATCCCCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHSSSTSRSPSPTVSPALLSHRA*PCLSPK Trigger: TTTAGGGGATAAACATGGCAATGCTCTGTGGCTCAA...CAAAGCTGGAGACACAGTTGGTGAAGGAGACCTGCTTGTGGAGCTGGAATGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177312.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAAGTTAACGTGTGCCCTTaGAAGCCATCAGGATACACA | + |
|
Preference number: 5 (lower is better) Translates to: LRNKQEAVEPPAQECSCKVNVCP*KPSGYT Trigger: TGTGTATCCTGATGGCTTCAAAGGGCACACGTTAAC...TTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS TCA 90 bp | ACATCAGGCCTAATAACTGGTACTCTTGAATGTTCTTGGAAGCGCTaGGCTCGTAGCTGGGATGCCACAAATACAGATGATGCAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TSGLITGTLECSWKR*ARSWDATNTDDAMA Trigger: GGCCATTGCATCATCTGTATTTGTGGCATCCCAGCTACGAGCTCAGCGCTTCCAAGAACATTCAAGAGTACCAGTTATTAGGCCTGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000152383.8 |
||
| CDS TCA 90 bp | ACTTCCACGGTAAATGCCGGCCCATTGTTAGATGCCACGACAGTATaGTCTTCATCATGTAACTTTACCGAGAGCTCCCACTTAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TSTVNAGPLLDATTV*SSSCNFTESSHLAT Trigger: TGTGGCTAAGTGGGAGCTCTCGGTAAAGTTACATGATGAAGATCATACTGTCGTGGCATCTAACAATGGGCCGGCATTTACCGTGGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000152383.8 |
||
| CDS TCA 90 bp | GGGAGCACAGAGTGCTGCTGGTGTCCTTGGGCACTTTTTCAAGCATaGATTTGTTCAGCTCTGCAGCAAGCTTGGTTAAAATGTGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: GSTECCWCPWALFQA*ICSALQQAWLKCAL Trigger: AAGTGCACATTTTAACCAAGCTTGCTGCAGAGCTGAACAAATTCATGCTTGAAAAAGTGCCCAAGGACACCAGCAGCACTCTGTGCTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS GCA 90 bp | GCTTGGTTAAAATGTGCACTTTGTACACTGTGCCAAGAAACTGGATaGTCATGTTTCCACCTGCTTCCCGAGAAAGACACTGCACAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AWLKCALCTLCQETG*SCFHLLPEKDTAQS Trigger: GGACTGTGCAGTGTCTTTCTCGGGAAGCAGGTGGAAACATGAGCATCCAGTTTCTTGGCACAGTGTACAAAGTGCACATTTTAACCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS CCA 90 bp | GTCTCCTTTCACAAAACGTGTGTTGATTATCACCTCCCGGAGCAATaGGATGTTGTGTGTAACACCCCGGATCACATAATTGTCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSFHKTCVDYHLPEQ*DVVCNTPDHIIVQC Trigger: GCACTGGACAATTATGTGATCCGGGGTGTTACACACAACATCCCATTGCTCCGGGAGGTGATAATCAACACACGTTTTGTGAAAGGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CAA 90 bp | GTGTCTCCAGCTTTGCAGTGCACCAATTTCACCTTGCCCATTTTCCCAGCTGTCTTTTCAAGCATGAATTaGTTCAGCTCTGCAGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSPALQCTNFTLPIFPAVFSSMN*FSSAAS Trigger: GCTTGCTGCAGAGCTGAACAAATTCATGCTTGAAAA...GACAGCTGGGAAAATGGGCAAGGTGAAATTGGTGCACTGCAAAGCTGGAGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS CCA 90 bp | CGTAGCTGGGATGCCACAAATACAGATGATGCAATGGCCAATAACTaGTTTCTCTCACTCAGTGTTAACGTGTGCCCTTTGAAGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RSWDATNTDDAMANN*FLSLSVNVCPLKPS Trigger: TGATGGCTTCAAAGGGCACACGTTAACACTGAGTGAGAGAAACCAGTTATTGGCCATTGCATCATCTGTATTTGTGGCATCCCAGCTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS CCA 90 bp | GCAAGCTTGGTTAAAATGTGCACTTTGTACACTGTGCCAAGAAACTaGATGCTCATGTTTCCACCTGCTTCCCGAGAAAGACACTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: ASLVKMCTLYTVPRN*MLMFPPASRERHCT Trigger: TGTGCAGTGTCTTTCTCGGGAAGCAGGTGGAAACATGAGCATCCAGTTTCTTGGCACAGTGTACAAAGTGCACATTTTAACCAAGCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAACGCTTTGCAAACTCTTaGTTTTCTGACAGGAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: LRNKQEAVEPPAQECSCKRFANS*FSDRNP Trigger: TGGATTCCTGTCAGAAAACAAAGAGTTTGCAAAGCG...TTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR CAA 90 bp | AGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTCCTGTAAATGCCTCTTGGCTAATAGTTaGCTTTCTATCTTGTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: RNKQEAVEPPAQECSCKCLLANS*LSILSP Trigger: GGGTGACAAGATAGAAAGCAAACTATTAGCCAAGAG...GCATTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR CAA 90 bp | AATATTTACAGTCAATTGGCACAGCCTGTCGCCTCTGTGTATATTGTCTTCATTCGGCCTGCTCTCCCATaGCTTGGCGAGTTTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NIYSQLAQPVASVYIVFIRPALP*LGEFQD Trigger: ATCCTGAAACTCGCCAAGCAATGGGAGAGCAGGCCG...AATGAAGACAATATACACAGAGGCGACAGGCTGTGCCAATTGACTGTAAATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CAA 90 bp | TCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGTTTTCAAGCATGAATTaGTTCAGCTCTGCAGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVLPLLRNKQEAVEPPAQFSSMN*FSSAAS Trigger: GCTTGCTGCAGAGCTGAACAAATTCATGCTTGAAAA...CTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGGAGTGCTTGATGCCCATCTTCTaGCAAGTTTTAATAACCCTA | + |
|
Preference number: 5 (lower is better) Translates to: LPLLRNKQEAVEPPAQECLMPIF*QVLITL Trigger: TAGGGTTATTAAAACTTGCAAGAAGATGGGCATCAA...GCACTCCTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CAA 90 bp | GAAATGCTAATATTTACAGTCAATTGGCACAGCCTGTCGCCTCTGTGTATATTGCCCTGGGTGTACAGCTaGGGCCCTGGTTTTCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: EMLIFTVNWHSLSPLCILPWVYS*GPGFLN Trigger: ATTAAGAAAACCAGGGCCCAAGCTGTACACCCAGGG...CAATATACACAGAGGCGACAGGCTGTGCCAATTGACTGTAAATATTAGCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CAA 90 bp | TCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACCTCCTGCACAGTTGACCTTTGCTCTCTaGGCTAATAGTTTGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVLPLLRNKQEAVEPPAQLTFAL*ANSLLS Trigger: AGAAAGCAAACTATTAGCCAAGAGAGCAAAGGTCAA...CTGTGCAGGAGGTTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR CAA 90 bp | GAAATGCTAATATTTACAGTCAATTGGCACAGCCTGTCGCCTCTGTGTATATTGGTGCTGCTGGTGTCCTaGGGCACTTTTTCAAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: EMLIFTVNWHSLSPLCILVLLVS*GTFSSM Trigger: CATGCTTGAAAAAGTGCCCAAGGACACCAGCAGCAC...CAATATACACAGAGGCGACAGGCTGTGCCAATTGACTGTAAATATTAGCATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CAA 90 bp | GTTGGCAGAATGTCGGTTTTGCCTCTTCTGAGGAATAAACAGGAGGCTGTAGAACTCTTGGCTAATAGTTaGCTTTCTATCTTGTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: VGRMSVLPLLRNKQEAVELLANS*LSILSP Trigger: GGGTGACAAGATAGAAAGCAAACTATTAGCCAAGAG...TTCTACAGCCTCCTGTTTATTCCTCAGAAGAGGCAAAACCGACATTCTGCCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR CAA 90 bp | ATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTCTTCGATCCAGAAAAATGCTaGGCGCCTCCTCTACCACCT | + |
|
Preference number: 5 (lower is better) Translates to: ISRISIGDLLAECRFCLFDPEKC*APPLPP Trigger: AGGTGGTAGAGGAGGCGCCAAGCATTTTTCTGGATC...GAAGAGGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CAA 90 bp | CAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTCTTCTGAGAGCTCTGCAGCAAGCTaGGTTAAAATGTGCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QEFPLVICWQNVGFASSESSAAS*VKMCTL Trigger: CAAAGTGCACATTTTAACCAAGCTTGCTGCAGAGCT...CTCAGAAGAGGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS TCA 90 bp | CTTCATCTGCATCCTTTACTACCCCATCAAAACCAGGGATTGTGTTaGCCTTTGCTCTCTTGGCTAATAGTTTGCTTTCTATCTTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LHLHPLLPHQNQGLC*PLLSWLIVCFLSCH Trigger: GTGACAAGATAGAAAGCAAACTATTAGCCAAGAGAGCAAAGGTCAACACAATCCCTGGTTTTGATGGGGTAGTAAAGGATGCAGATGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000135578.8 ENSMUST00000177312.8 |
||
| CDS GCA 90 bp | TCAAGCATGAATTTGTTCAGCTCTGCAGCAAGCTTGGTTAAAATGTaGACTTTGTACACTGTGCCAAGAAACTGGATGCTCATGTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSMNLFSSAASLVKM*TLYTVPRNWMLMFP Trigger: TGGAAACATGAGCATCCAGTTTCTTGGCACAGTGTACAAAGTGCACATTTTAACCAAGCTTGCTGCAGAGCTGAACAAATTCATGCTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR CAA 90 bp | GTGCACCAATTTCACCTTGCCCATTTTCCCAGCTGTCATACTGTTCTGCATTTTTTGACCTTTGCTCTCTaGGCTAATAGTTTGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VHQFHLAHFPSCHTVLHFLTFAL*ANSLLS Trigger: AGAAAGCAAACTATTAGCCAAGAGAGCAAAGGTCAA...AAAATGCAGAACAGTATGACAGCTGGGAAAATGGGCAAGGTGAAATTGGTGCAC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000177312.8 |
||
| CDS-3UTR CAA 90 bp | TATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCGATGTCACTTCCTGGTaGGATGCCACTGTCAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: YLYQEFPLVICWQNVGFADVTSW*DATVNS Trigger: CGAGTTGACAGTGGCATCCAACCAGGAAGTGACATC...GGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CAA 90 bp | AATATTTACAGTCAATTGGCACAGCCTGTCGCCTCTGTGTATATTGTCTTCATTAGCTCTGCAGCAAGCTaGGTTAAAATGTGCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NIYSQLAQPVASVYIVFISSAAS*VKMCTL Trigger: CAAAGTGCACATTTTAACCAAGCTTGCTGCAGAGCT...AATGAAGACAATATACACAGAGGCGACAGGCTGTGCCAATTGACTGTAAATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CAA 90 bp | GTATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCACTGTGTCTCCAGCTTaGCAGTGCACCAATTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: VFISRISIGDLLAECRFCTVSPA*QCTNFT Trigger: GGTGAAATTGGTGCACTGCAAAGCTGGAGACACAGT...GCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CAA 90 bp | TATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTTCACAAAACGTGTGTaGATTATCACCTCCCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: YLYQEFPLVICWQNVGFAFTKRV*IITSRS Trigger: GCTCCGGGAGGTGATAATCAACACACGTTTTGTGAA...GGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS-3UTR CAA 90 bp | ATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTCTTCTTTTCAAGCATGAATTaGTTCAGCTCTGCAGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISRISIGDLLAECRFCLFFSSMN*FSSAAS Trigger: GCTTGCTGCAGAGCTGAACAAATTCATGCTTGAAAA...GAAGAGGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS-3UTR CAA 90 bp | TATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCTTGAGCCACAGAGCATaGCCATGTTTATCCCCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: YLYQEFPLVICWQNVGFALSHRA*PCLSPK Trigger: TTTAGGGGATAAACATGGCAATGCTCTGTGGCTCAA...GGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR CAA 90 bp | TATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCCCGCTTTGCAAACTCTTaGTTTTCTGACAGGAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: YLYQEFPLVICWQNVGFARFANS*FSDRNP Trigger: TGGATTCCTGTCAGAAAACAAAGAGTTTGCAAAGCG...GGCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS-3UTR CAA 90 bp | GTATTTATATCAAGAATTTCCATTGGTGATTTGTTGGCAGAATGTCGGTTTTGCGTTCGACCTGTAGTCTaGTATTCATCTCCAAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VFISRISIGDLLAECRFCVRPVV*YSSPRS Trigger: ACTTCTTGGAGATGAATACAAGACTACAGGTCGAAC...GCAAAACCGACATTCTGCCAACAAATCACCAATGGAAATTCTTGATATAAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS GCA 72 bp | ACTGGAGCATGCTTCAGCGTCCCCAGCAATTGCTGCTaGGAGGACCGCCGCCAATGCCGCCTGGCCGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: TGACFSVPSNCC*EDRRQCRLAAN Trigger: GTTGGCGGCCAGGCGGCATTGGCGGCGGTCCTCGCAGCAGCAATTGCTGGGGACGCTGAAGCATGCTCCAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000135578.8 ENSMUST00000154206.8 |
||
| CDS TCA 72 bp | CTTGACTCATTTCACCTGGCATCATGTCTCCAGGCTTaGCAGAAACGGCCACCACCACTCCAGGCATCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LDSFHLASCLQA*QKRPPPLQASG Trigger: CCCCGATGCCTGGAGTGGTGGTGGCCGTTTCTGTCAAGCCTGGAGACATGATGCCAGGTGAAATGAGTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152383.8 |
||
| CDS CCA 72 bp | GCTTTAGCCAAAGCCACGGCCTGCTCTCCCATTGCTTaGCGAGTTTCAGGATCCAGAAAAATGCTTGGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: ALAKATACSPIA*RVSGSRKMLGA Trigger: GGCGCCAAGCATTTTTCTGGATCCTGAAACTCGCCAAGCAATGGGAGAGCAGGCCGTGGCTTTGGCTAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS CAA 72 bp | GGCTTTAGCCAAAGCCACGGCCTGCTCTCCCATTGCTaGGCGAGTTTCAGGATCCAGAAAAATGCTTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GFSQSHGLLSHC*ASFRIQKNAWR Trigger: GCGCCAAGCATTTTTCTGGATCCTGAAACTCGCCAAGCAATGGGAGAGCAGGCCGTGGCTTTGGCTAAAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS CAA 90 bp | CCTGCTCTCCCATTGCTTGGCGAGTTTCAGGATCCAGAAAAATGCTaGGCGCCTCCTCTACCACCTTCTGGTTCCTTCTCTGGATCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PALPLLGEFQDPEKC*APPLPPSGSFSGSS Trigger: GCTCGATCCAGAGAAGGAACCAGAAGGTGGTAGAGGAGGCGCCAAGCATTTTTCTGGATCCTGAAACTCGCCAAGCAATGGGAGAGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS CAA 90 bp | GCTTCCCGAGAAAGACACTGCACAGTCCTCTGCGTGCCATCAACGTaGACAGACAATAAGGGTGACGCCAGGTTCCACGTACTGGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: ASRERHCTVLCVPST*TDNKGDARFHVLVT Trigger: TGTGACCAGTACGTGGAACCTGGCGTCACCCTTATTGTCTGTCAACGTTGATGGCACGCAGAGGACTGTGCAGTGTCTTTCTCGGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000152383.8 |
||
| CDS GCA 72 bp | CACGGCTTTAGCCAAAGCCACGGCCTGCTCTCCCATTaGTTGGCGAGTTTCAGGATCCAGAAAAATGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HGFSQSHGLLSH*LASFRIQKNAW Trigger: CCAAGCATTTTTCTGGATCCTGAAACTCGCCAAGCAATGGGAGAGCAGGCCGTGGCTTTGGCTAAAGCCGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS GCA 72 bp | CCACCTGCTTCCCGAGAAAGACACTGCACAGTCCTCTaGGTGCCATCAACGTTGACAGACAATAAGGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: PPASRERHCTVL*VPSTLTDNKGD Trigger: GTCACCCTTATTGTCTGTCAACGTTGATGGCACGCAGAGGACTGTGCAGTGTCTTTCTCGGGAAGCAGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS CCA 72 bp | CTGTCAACTCGGACACCAGGTAGATGTATCGGCTCTTaGTACTGGGACAGCCTCCCAATAGACGGTAAACCG | + |
|
Preference number: 6 (lower is better) Translates to: LSTRTPGRCIGS*YWDSLPIDGKP Trigger: CGGTTTACCGTCTATTGGGAGGCTGTCCCAGTACCAAGAGCCGATACATCTACCTGGTGTCCGAGTTGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS TCA 72 bp | AAAGACACTGCACAGTCCTCTGCGTGCCATCAACGTTaGCAGACAATAAGGGTGACGCCAGGTTCCACGTAC | + |
|
Preference number: 6 (lower is better) Translates to: KDTAQSSACHQR*QTIRVTPGSTY Trigger: GTACGTGGAACCTGGCGTCACCCTTATTGTCTGTCAACGTTGATGGCACGCAGAGGACTGTGCAGTGTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000152383.8 |
||
| CDS GCA 72 bp | CTCCCATTGCTTGGCGAGTTTCAGGATCCAGAAAAATaGTTGGCGCCTCCTCTACCACCTTCTGGTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LPLLGEFQDPEK*LAPPLPPSGSF Trigger: GAAGGAACCAGAAGGTGGTAGAGGAGGCGCCAAGCATTTTTCTGGATCCTGAAACTCGCCAAGCAATGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS GCA 72 bp | GAAGAATACTTCACGGCTTTAGCCAAAGCCACGGCCTaGTCTCCCATTGCTTGGCGAGTTTCAGGATCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: EEYFTALAKATA*SPIAWRVSGSR Trigger: TCTGGATCCTGAAACTCGCCAAGCAATGGGAGAGCAGGCCGTGGCTTTGGCTAAAGCCGTGAAGTATTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS GCA 72 bp | CACTGTGCCAAGAAACTGGATGCTCATGTTTCCACCTaGTTCCCGAGAAAGACACTGCACAGTCCTCTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: HCAKKLDAHVST*FPRKTLHSPLR Trigger: ACGCAGAGGACTGTGCAGTGTCTTTCTCGGGAAGCAGGTGGAAACATGAGCATCCAGTTTCTTGGCACAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS CCA 72 bp | ACTCGGACACCAGGTAGATGTATCGGCTCTTGGTACTaGGACAGCCTCCCAATAGACGGTAAACCGAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: TRTPGRCIGSWY*DSLPIDGKPKD Trigger: GTCTTTCGGTTTACCGTCTATTGGGAGGCTGTCCCAGTACCAAGAGCCGATACATCTACCTGGTGTCCGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS CAA 72 bp | GAAAGACACTGCACAGTCCTCTGCGTGCCATCAACGTaGACAGACAATAAGGGTGACGCCAGGTTCCACGTA | + |
|
Preference number: 6 (lower is better) Translates to: ERHCTVLCVPST*TDNKGDARFHV Trigger: TACGTGGAACCTGGCGTCACCCTTATTGTCTGTCAACGTTGATGGCACGCAGAGGACTGTGCAGTGTCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000152383.8 |
||
| CDS GCA 72 bp | CTTGTAGGGGTCCTCAGCATAAACCCGACATTCAACTaGCCAGCCACTGATGGGAATATCCTCTTGCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVGVLSINPTFN*PATDGNILLLV Trigger: CACAAGCAAGAGGATATTCCCATCAGTGGCTGGGCAGTTGAATGTCGGGTTTATGCTGAGGACCCCTACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS GCA 72 bp | GTTGTGTGTAACACCCCGGATCACATAATTGTCCAGTaGGTCTTCCATCCTCTTCAGGGCTTCTGCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VVCNTPDHIIVQ*VFHPLQGFCSV Trigger: GACAGAGCAGAAGCCCTGAAGAGGATGGAAGACGCACTGGACAATTATGTGATCCGGGGTGTTACACACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS CCA 72 bp | CATTGCTTGGCGAGTTTCAGGATCCAGAAAAATGCTTaGCGCCTCCTCTACCACCTTCTGGTTCCTTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HCLASFRIQKNA*RLLYHLLVPSL Trigger: CAGAGAAGGAACCAGAAGGTGGTAGAGGAGGCGCCAAGCATTTTTCTGGATCCTGAAACTCGCCAAGCAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS CAA 72 bp | CCATTGCTTGGCGAGTTTCAGGATCCAGAAAAATGCTaGGCGCCTCCTCTACCACCTTCTGGTTCCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLLGEFQDPEKC*APPLPPSGSFS Trigger: AGAGAAGGAACCAGAAGGTGGTAGAGGAGGCGCCAAGCATTTTTCTGGATCCTGAAACTCGCCAAGCAATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS CAA 72 bp | ACATTCAACTGCCCAGCCACTGATGGGAATATCCTCTaGCTTGTGCCTGAGTGGGTAACCCTTAGCAACAAG | + |
|
Preference number: 6 (lower is better) Translates to: TFNCPATDGNIL*LVPEWVTLSNK Trigger: CTTGTTGCTAAGGGTTACCCACTCAGGCACAAGCAAGAGGATATTCCCATCAGTGGCTGGGCAGTTGAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS TCA 72 bp | TCTGGTTCCTTCTCTGGATCGAGCACTCCCTCTCATTaGGCCACAGAGCATTGCCATGTTTATCCCCTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SGSFSGSSTPSH*ATEHCHVYPLK Trigger: TTTTAGGGGATAAACATGGCAATGCTCTGTGGCTCAATGAGAGGGAGTGCTCGATCCAGAGAAGGAACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS CAA 72 bp | TTCTGGTTCCTTCTCTGGATCGAGCACTCCCTCTCATaGAGCCACAGAGCATTGCCATGTTTATCCCCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: FWFLLWIEHSLS*SHRALPCLSPK Trigger: TTTAGGGGATAAACATGGCAATGCTCTGTGGCTCAATGAGAGGGAGTGCTCGATCCAGAGAAGGAACCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000177312.8 |
||
| CDS CAA 90 bp | ATAAACCCGACATTCAACTGCCCAGCCACTGATGGGAATATCCTCTaGCTTGTGCCTGAGTGGGTAACCCTTAGCAACAAGGATCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: INPTFNCPATDGNIL*LVPEWVTLSNKDHF Trigger: GAAATGATCCTTGTTGCTAAGGGTTACCCACTCAGGCACAAGCAAGAGGATATTCCCATCAGTGGCTGGGCAGTTGAATGTCGGGTTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS TCA 72 bp | GTAAATGCCGGCCCATTGTTAGATGCCACGACAGTATaGTCTTCATCATGTAACTTTACCGAGAGCTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VNAGPLLDATTV*SSSCNFTESSH Trigger: GTGGGAGCTCTCGGTAAAGTTACATGATGAAGATCATACTGTCGTGGCATCTAACAATGGGCCGGCATTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000152383.8 |
||
| CDS CAA 90 bp | TCAGAGAGAAACTTAGTGCTGATGTCTCCTTTCACAAAACGTGTGTaGATTATCACCTCCCGGAGCAATGGGATGTTGTGTGTAACACCC | + |
|
Preference number: 6 (lower is better) Translates to: SERNLVLMSPFTKRV*IITSRSNGMLCVTP Trigger: GGGTGTTACACACAACATCCCATTGCTCCGGGAGGTGATAATCAACACACGTTTTGTGAAAGGAGACATCAGCACTAAGTTTCTCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS CAA 90 bp | CACAGAGTGCTGCTGGTGTCCTTGGGCACTTTTTCAAGCATGAATTaGTTCAGCTCTGCAGCAAGCTTGGTTAAAATGTGCACTTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: HRVLLVSLGTFSSMN*FSSAASLVKMCTLY Trigger: GTACAAAGTGCACATTTTAACCAAGCTTGCTGCAGAGCTGAACAAATTCATGCTTGAAAAAGTGCCCAAGGACACCAGCAGCACTCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS GCA 72 bp | AAATGTGCACTTTGTACACTGTGCCAAGAAACTGGATaGTCATGTTTCCACCTGCTTCCCGAGAAAGACACT | + |
|
Preference number: 6 (lower is better) Translates to: KCALCTLCQETG*SCFHLLPEKDT Trigger: AGTGTCTTTCTCGGGAAGCAGGTGGAAACATGAGCATCCAGTTTCTTGGCACAGTGTACAAAGTGCACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS CCA 72 bp | CACAAAACGTGTGTTGATTATCACCTCCCGGAGCAATaGGATGTTGTGTGTAACACCCCGGATCACATAATT | + |
|
Preference number: 6 (lower is better) Translates to: HKTCVDYHLPEQ*DVVCNTPDHII Trigger: AATTATGTGATCCGGGGTGTTACACACAACATCCCATTGCTCCGGGAGGTGATAATCAACACACGTTTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS TCA 72 bp | CTAATAACTGGTACTCTTGAATGTTCTTGGAAGCGCTaGGCTCGTAGCTGGGATGCCACAAATACAGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: LITGTLECSWKR*ARSWDATNTDD Trigger: ATCATCTGTATTTGTGGCATCCCAGCTACGAGCTCAGCGCTTCCAAGAACATTCAAGAGTACCAGTTATTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038374.13 ENSMUST00000152383.8 |
||
| CDS CCA 72 bp | GATGCCACAAATACAGATGATGCAATGGCCAATAACTaGTTTCTCTCACTCAGTGTTAACGTGTGCCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: DATNTDDAMANN*FLSLSVNVCPL Trigger: CAAAGGGCACACGTTAACACTGAGTGAGAGAAACCAGTTATTGGCCATTGCATCATCTGTATTTGTGGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS CCA 72 bp | GTTAAAATGTGCACTTTGTACACTGTGCCAAGAAACTaGATGCTCATGTTTCCACCTGCTTCCCGAGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VKMCTLYTVPRN*MLMFPPASRER Trigger: TCTTTCTCGGGAAGCAGGTGGAAACATGAGCATCCAGTTTCTTGGCACAGTGTACAAAGTGCACATTTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS CAA 72 bp | AACTTAGTGCTGATGTCTCCTTTCACAAAACGTGTGTaGATTATCACCTCCCGGAGCAATGGGATGTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: NLVLMSPFTKRV*IITSRSNGMLC Trigger: ACACAACATCCCATTGCTCCGGGAGGTGATAATCAACACACGTTTTGTGAAAGGAGACATCAGCACTAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS CAA 90 bp | ATGAATTTGTTCAGCTCTGCAGCAAGCTTGGTTAAAATGTGCACTTaGTACACTGTGCCAAGAAACTGGATGCTCATGTTTCCACCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: MNLFSSAASLVKMCT*YTVPRNWMLMFPPA Trigger: AGCAGGTGGAAACATGAGCATCCAGTTTCTTGGCACAGTGTACAAAGTGCACATTTTAACCAAGCTTGCTGCAGAGCTGAACAAATTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS TCA 72 bp | TTCTGCATTTTCATAGCTTCAATCACACAGATTTCCTaGCCTTCTGCTACCATGTCTCCAGGCTTGACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FCIFIASITQIS*PSATMSPGLTE Trigger: TTCTGTCAAGCCTGGAGACATGGTAGCAGAAGGTCAGGAAATCTGTGTGATTGAAGCTATGAAAATGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038374.13 |
||
| CDS GCA 72 bp | AATTTGTTCAGCTCTGCAGCAAGCTTGGTTAAAATGTaGACTTTGTACACTGTGCCAAGAAACTGGATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: NLFSSAASLVKM*TLYTVPRNWML Trigger: GAGCATCCAGTTTCTTGGCACAGTGTACAAAGTGCACATTTTAACCAAGCTTGCTGCAGAGCTGAACAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS CAA 72 bp | CCATCAAAACCAGGGATTGTGTTGACCTTTGCTCTCTaGGCTAATAGTTTGCTTTCTATCTTGTCACCCATG | + |
|
Preference number: 6 (lower is better) Translates to: PSKPGIVLTFAL*ANSLLSILSPM Trigger: CATGGGTGACAAGATAGAAAGCAAACTATTAGCCAAGAGAGCAAAGGTCAACACAATCCCTGGTTTTGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000135578.8 ENSMUST00000177312.8 |
||
| CDS CAA 72 bp | GCATCCTTTACTACCCCATCAAAACCAGGGATTGTGTaGACCTTTGCTCTCTTGGCTAATAGTTTGCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASFTTPSKPGIV*TFALLANSLLS Trigger: AGAAAGCAAACTATTAGCCAAGAGAGCAAAGGTCAACACAATCCCTGGTTTTGATGGGGTAGTAAAGGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000135578.8 ENSMUST00000177312.8 |
||
| CDS CAA 72 bp | TTCAGCTCTGCAGCAAGCTTGGTTAAAATGTGCACTTaGTACACTGTGCCAAGAAACTGGATGCTCATGTTT | + |
|
Preference number: 6 (lower is better) Translates to: FSSAASLVKMCT*YTVPRNWMLMF Trigger: AAACATGAGCATCCAGTTTCTTGGCACAGTGTACAAAGTGCACATTTTAACCAAGCTTGCTGCAGAGCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS CAA 90 bp | GCTTCATCTGCATCCTTTACTACCCCATCAAAACCAGGGATTGTGTaGACCTTTGCTCTCTTGGCTAATAGTTTGCTTTCTATCTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ASSASFTTPSKPGIV*TFALLANSLLSILS Trigger: TGACAAGATAGAAAGCAAACTATTAGCCAAGAGAGCAAAGGTCAACACAATCCCTGGTTTTGATGGGGTAGTAAAGGATGCAGATGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000135578.8 ENSMUST00000177312.8 |
||
| CDS CAA 90 bp | TTGGGCACTTTTTCAAGCATGAATTTGTTCAGCTCTGCAGCAAGCTaGGTTAAAATGTGCACTTTGTACACTGTGCCAAGAAACTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LGTFSSMNLFSSAAS*VKMCTLYTVPRNWM Trigger: CATCCAGTTTCTTGGCACAGTGTACAAAGTGCACATTTTAACCAAGCTTGCTGCAGAGCTGAACAAATTCATGCTTGAAAAAGTGCCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||
| CDS TCA 72 bp | CATCCTTTACTACCCCATCAAAACCAGGGATTGTGTTaGCCTTTGCTCTCTTGGCTAATAGTTTGCTTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: HPLLPHQNQGLC*PLLSWLIVCFL Trigger: TAGAAAGCAAACTATTAGCCAAGAGAGCAAAGGTCAACACAATCCCTGGTTTTGATGGGGTAGTAAAGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000135578.8 ENSMUST00000177312.8 |
||
| CDS CAA 72 bp | TTTTCAAGCATGAATTTGTTCAGCTCTGCAGCAAGCTaGGTTAAAATGTGCACTTTGTACACTGTGCCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: FSSMNLFSSAAS*VKMCTLYTVPR Trigger: TCTTGGCACAGTGTACAAAGTGCACATTTTAACCAAGCTTGCTGCAGAGCTGAACAAATTCATGCTTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038374.13 ENSMUST00000132444.2 ENSMUST00000152383.8 |
||