Pregenerated sensors for PCBP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001120Ensembl transcript IDs: ENSMUST00000001148.11, ENSMUST00000105411.9, ENSMUST00000168465.9, ENSMUST00000173854.8
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTaGGGCTGCGGGCTGGAGCCATCCGATGTGTGCAGTGGAGGACCT | + |
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Preference number: 1 (lower is better) Translates to: ISARKDRQSVQCASW*GCGLEPSDVCSGGP Trigger: AGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| 3UTR GCA 90 bp | CGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTaGCAGCTGGTGAGGCTGCGGGCTGGAGCCATCCGATGTGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: RSIHICKEGQAVCTV*QLVRLRAGAIRCVQ Trigger: CTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCATCTTGGAAGACACCTGGAGGGCACAAGTGCCCCCTCCCCGAGATATCCCTCTGGCACTCTACCCTaGTCCTTAGATACACCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SHLGRHLEGTSAPSPRYPSGTLP*SLDTPP Trigger: TGGGGGTGTATCTAAGGAGCAGGGTAGAGTGCCAGA...GGGATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAGATGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGGAAGACACCTGGAGGGCACAAGTGCCCCCTCCCCGAGATATCCCAGTGAAAACCTAGGGCGGAAATaGGTCAGTAGACTGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: LGRHLEGTSAPSPRYPSENLGRK*VSRLGE Trigger: CTCACCCAGTCTACTGACTCATTTCCGCCCTAGGTT...TTCACTGGGATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGGACATAGGAAGTGCTGTTAAAGCATCAAACCAACTTTTAAACAGACAGCAGTGTGCCAGCTGGTaGGGCTGCGGGCTGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: QQDIGSAVKASNQLLNRQQCASW*GCGLEP Trigger: TGGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTG...CTGTCTGTTTAAAAGTTGGTTTGATGCTTTAACAGCACTTCCTATGTCCTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCCCAAGTCCCTCCTCTTCCAGACACTCCCTGCAGGTTGCAATAAAAGTACCAAACAGACAGTCACATaGATACTGAGGAATAAATCT | + |
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Preference number: 2 (lower is better) Translates to: TPKSLLFQTLPAGCNKSTKQTVT*ILRNKS Trigger: AGATTTATTCCTCAGTATCCATGTGACTGTCTGTTT...GGTACTTTTATTGCAACCTGCAGGGAGTGTCTGGAAGAGGAGGGACTTGGGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| 3UTR TCA 72 bp | AGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTaGGGCTGCGGGCTGGAGCCATCCGATGTGTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: RKDRQSVQCASW*GCGLEPSDVCS Trigger: ACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| 3UTR GCA 72 bp | AGTCAGGGTCCCACCCCACCCTCTGGCACTCTACCCTaGTCCTTAGATACACCCCCAAGTCCCTCCTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: SQGPTPPSGTLP*SLDTPPSPSSS Trigger: GGAAGAGGAGGGACTTGGGGGTGTATCTAAGGAGCAGGGTAGAGTGCCAGAGGGTGGGGTGGGACCCTGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| 3UTR GCA 72 bp | CATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTaGCAGCTGGTGAGGCTGCGGGCTGGAGCCATCCGA | + |
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Preference number: 3 (lower is better) Translates to: HICKEGQAVCTV*QLVRLRAGAIR Trigger: TCGGATGGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| 3UTR TCA 72 bp | GTACCTCTGATCCCTGCATACAACCTAGGGCGGAAATaGGTCAGTAGACTGGGTGAGAGAGGAGGGTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: VPLIPAYNLGRK*VSRLGERGGSL Trigger: CAGAGACCCTCCTCTCTCACCCAGTCTACTGACTCATTTCCGCCCTAGGTTGTATGCAGGGATCAGAGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| 3UTR GCA 72 bp | CCCAAGTCCCTCCTCTTCCAGACACTCCCTGCAGGTTaGAATAAAAGTACCTCTGATCCCTGCATACAACCT | + |
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Preference number: 3 (lower is better) Translates to: PKSLLFQTLPAG*NKSTSDPCIQP Trigger: AGGTTGTATGCAGGGATCAGAGGTACTTTTATTGCAACCTGCAGGGAGTGTCTGGAAGAGGAGGGACTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR TCA 90 bp | CTGGTGAGGCTGCGGGCTGGAGCCATCCGATGTGTGCAGTGGAGGACCTTGGGTGTGCCGAGGGTGCTGTaGGGAAGGATGGGTGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LVRLRAGAIRCVQWRTLGVPRVL*GRMGGA Trigger: GGCCCCACCCATCCTTCCTCACAGCACCCTCGGCAC...ACCCAAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CCA 90 bp | CAGCTGGTGAGGCTGCGGGCTGGAGCCATCCGATGTGTGCAGTGGAGGACCTTGGGTGGAGGCGGGCTTTaGGCGGTAGGGAATGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: QLVRLRAGAIRCVQWRTLGGGGL*AVGNGG Trigger: GCCACCATTCCCTACCGCCCAAAGCCCGCCTCCACC...CAAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR CCA 90 bp | CCCTCCCCGAGATATCCCAGTGAAGTCAGGGTCCCACCCCACCCTCTGGCACTCGTGAGGAAGGATGGGTaGGGCCCAGATGGCGTCACC | + |
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Preference number: 4 (lower is better) Translates to: PSPRYPSEVRVPPHPLALVRKDG*GPDGVT Trigger: GGTGACGCCATCTGGGCCCCACCCATCCTTCCTCAC...GAGTGCCAGAGGGTGGGGTGGGACCCTGACTTCACTGGGATATCTCGGGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR TCA 90 bp | GTGAAGTCAGGGTCCCACCCCACCCTCTGGCACTCTACCCTGCTCCTTAGATACGTGCCGAGGGTGCTGTaGGGAAGGATGGGTGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VKSGSHPTLWHSTLLLRYVPRVL*GRMGGA Trigger: GGCCCCACCCATCCTTCCTCACAGCACCCTCGGCAC...GTATCTAAGGAGCAGGGTAGAGTGCCAGAGGGTGGGGTGGGACCCTGACTTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR TCA 90 bp | CCCTGCTCCTTAGATACACCCCCAAGTCCCTCCTCTTCCAGACACTCCCTGCAGCCTGCCACCTGGACCTaGGCACCTGTGGACTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PCSLDTPPSPSSSRHSLQPATWT*APVDSR Trigger: CCGGGAGTCCACAGGTGCTCAGGTCCAGGTGGCAGG...CTGCAGGGAGTGTCTGGAAGAGGAGGGACTTGGGGGTGTATCTAAGGAGCAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CCA 90 bp | CCCTCCCCGAGATATCCCAGTGAAGTCAGGGTCCCACCCCACCCTCTGGCACTCGGTGGCACCTTTCGGTaGGGACTCCAGCATGACCAC | + |
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Preference number: 4 (lower is better) Translates to: PSPRYPSEVRVPPHPLALGGTFR*GLQHDH Trigger: GTGGTCATGCTGGAGTCCCCACCGAAAGGTGCCACC...GAGTGCCAGAGGGTGGGGTGGGACCCTGACTTCACTGGGATATCTCGGGGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CCA 90 bp | GAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCTGCGGGCTGGAGCCGGCGGTAGGGAATGGTaGCACCTTTCGGTGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: EGQAVCTVCQLVRLRAGAGGREW*HLSVGT Trigger: AGTCCCCACCGAAAGGTGCCACCATTCCCTACCGCC...GGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR CCA 90 bp | CTGGTGAGGCTGCGGGCTGGAGCCATCCGATGTGTGCAGTGGAGGACCTTGGGTTTGGGCGGTAGGGAATaGTGGCACCTTTCGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LVRLRAGAIRCVQWRTLGLGGRE*WHLSVG Trigger: CCCCACCGAAAGGTGCCACCATTCCCTACCGCCCAA...ACCCAAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR GCA 90 bp | CTGGTGAGGCTGCGGGCTGGAGCCATCCGATGTGTGCAGTGGAGGACCTTGGGTGGAAAGGGGGTTTGCTaGATGGCCAACTGGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LVRLRAGAIRCVQWRTLGGKGVC*MANWWS Trigger: GCTCCACCAGTTGGCCATGCAGCAAACCCCCTTTCC...ACCCAAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR GCA 90 bp | CTGGTGAGGCTGCGGGCTGGAGCCATCCGATGTGTGCAGTGGAGGACCTTGGGTGGAGGAAAGGGGGTTTaGTGCATGGCCAACTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LVRLRAGAIRCVQWRTLGGGKGV*CMANWW Trigger: CCACCAGTTGGCCATGCAGCAAACCCCCTTTCCTCC...ACCCAAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR GCA 90 bp | GGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCTGCGGGCTGGAGCGGAGGAAAGGGGGTTTaGTGCATGGCCAACTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GRTGSLYSVPAGEAAGWSGGKGV*CMANWW Trigger: CCACCAGTTGGCCATGCAGCAAACCCCCTTTCCTCC...GCTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR CCA 90 bp | GAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCTGCGGGCTGGAGCCTGTAGCTCAGGGTGGTaGCTTAAGGTGCCGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: EGQAVCTVCQLVRLRAGACSSGW*LKVPRV Trigger: CACCCTCGGCACCTTAAGCCACCACCCTGAGCTACA...GGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CCA 90 bp | CCAGCTGGTGAGGCTGCGGGCTGGAGCCATCCGATGTGTGCAGTGGAGGACCTTTCACTGGAGGCTTGCTaGTGGCAGGGCTGTTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PAGEAAGWSHPMCAVEDLSLEAC*WQGCCS Trigger: TGAGCAACAGCCCTGCCACCAGCAAGCCTCCAGTGA...AAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CCA 90 bp | GAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCTGCGGGCTGGAGCCTCACTGGAGGCTTGCTaGTGGCAGGGCTGTTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: EGQAVCTVCQLVRLRAGASLEAC*WQGCCS Trigger: TGAGCAACAGCCCTGCCACCAGCAAGCCTCCAGTGA...GGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CCA 90 bp | CAGCTGGTGAGGCTGCGGGCTGGAGCCATCCGATGTGTGCAGTGGAGGACCTTGATCAGGGACCCACACTaGCTGGCAGGGACCACTAGT | + |
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Preference number: 4 (lower is better) Translates to: QLVRLRAGAIRCVQWRTLIRDPH*LAGTTS Trigger: ACTAGTGGTCCCTGCCAGCCAGTGTGGGTCCCTGAT...CAAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CCA 90 bp | AGCCATCTTGGAAGACACCTGGAGGGCACAAGTGCCCCCTCCCCGAGATATCCCTGCTGGCCGGTGGGCTaGCATCCAGACCTGACGACT | + |
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Preference number: 4 (lower is better) Translates to: SHLGRHLEGTSAPSPRYPCWPVG*HPDLTT Trigger: AGTCGTCAGGTCTGGATGCCAGCCCACCGGCCAGCA...GGGATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAGATGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR TCA 90 bp | GTGAAGTCAGGGTCCCACCCCACCCTCTGGCACTCTACCCTGCTCCTTAGATACGGAATGGTGAGCTCATaGGTGCTGGCCGGTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VKSGSHPTLWHSTLLLRYGMVSS*VLAGGL Trigger: CAGCCCACCGGCCAGCACTCATGAGCTCACCATTCC...GTATCTAAGGAGCAGGGTAGAGTGCCAGAGGGTGGGGTGGGACCCTGACTTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR TCA 90 bp | CCCTCCCCGAGATATCCCAGTGAAGTCAGGGTCCCACCCCACCCTCTGGCACTCGATCATTGGGAATGGTaGGCTCATGAGTGCTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PSPRYPSEVRVPPHPLALDHWEW*AHECWP Trigger: CGGCCAGCACTCATGAGCTCACCATTCCCAATGATC...GAGTGCCAGAGGGTGGGGTGGGACCCTGACTTCACTGGGATATCTCGGGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR TCA 90 bp | CTGGTGAGGCTGCGGGCTGGAGCCATCCGATGTGTGCAGTGGAGGACCTTGGGTGATCATTGGGAATGGTaGGCTCATGAGTGCTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: LVRLRAGAIRCVQWRTLGDHWEW*AHECWP Trigger: CGGCCAGCACTCATGAGCTCACCATTCCCAATGATC...ACCCAAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR GCA 90 bp | CAGCTGGTGAGGCTGCGGGCTGGAGCCATCCGATGTGTGCAGTGGAGGACCTTGTCTTGGAGCCACCTTTaGCGATCAGGGACCCACACT | + |
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Preference number: 4 (lower is better) Translates to: QLVRLRAGAIRCVQWRTLSWSHL*RSGTHT Trigger: AGTGTGGGTCCCTGATCGGCAAAGGTGGCTCCAAGA...CAAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR GCA 90 bp | CAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCTGCGGGCTGGGGAGGAAAGGGGGTTTaGTGCATGGCCAACTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QGRTGSLYSVPAGEAAGWGGKGV*CMANWW Trigger: CCACCAGTTGGCCATGCAGCAAACCCCCTTTCCTCC...CCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR CCA 90 bp | CCAGCTGGTGAGGCTGCGGGCTGGAGCCATCCGATGTGTGCAGTGGAGGACCTTAATCTGGGTGGGGGATaGCGTACTGTCCCTGGATTG | + |
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Preference number: 4 (lower is better) Translates to: PAGEAAGWSHPMCAVEDLNLGGG*RTVPGL Trigger: CAATCCAGGGACAGTACGCCATCCCCCACCCAGATT...AAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105411.9 ENSMUST00000173854.8 |
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| CDS-3UTR TCA 90 bp | CCCTCCCCGAGATATCCCAGTGAAGTCAGGGTCCCACCCCACCCTCTGGCACTCGTGGGGACTCCAGCATaGCCACACAGATCTGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: PSPRYPSEVRVPPHPLALVGTPA*PHRSVS Trigger: TGAAACAGATCTGTGTGGTCATGCTGGAGTCCCCAC...GAGTGCCAGAGGGTGGGGTGGGACCCTGACTTCACTGGGATATCTCGGGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR TCA 90 bp | GAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCTGCGGGCTGGAGCCGTGGGGACTCCAGCATaGCCACACAGATCTGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: EGQAVCTVCQLVRLRAGAVGTPA*PHRSVS Trigger: TGAAACAGATCTGTGTGGTCATGCTGGAGTCCCCAC...GGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR CCA 90 bp | CAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCTGCGGGCTGGTTGGTCAAATCTGGGTaGGGGATGGCGTACTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: QGRTGSLYSVPAGEAAGWLVKSG*GMAYCP Trigger: GGGACAGTACGCCATCCCCCACCCAGATTTGACCAA...CCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105411.9 ENSMUST00000173854.8 |
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| CDS-3UTR TCA 90 bp | CTTGGAAGACACCTGGAGGGCACAAGTGCCCCCTCCCCGAGATATCCCAGTGAATGGGCAGTTTCCCTCTaGGATGTTGATCCTGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: LGRHLEGTSAPSPRYPSEWAVSL*DVDPGA Trigger: GGCGCCAGGATCAACATCTCAGAGGGAAACTGCCCA...TTCACTGGGATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR TCA 90 bp | GCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGCCTGCCACCTGGACCTaGGCACCTGTGGACTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: ALFISARKDRQSVQCASWPATWT*APVDSR Trigger: CCGGGAGTCCACAGGTGCTCAGGTCCAGGTGGCAGG...CCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR TCA 90 bp | CGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGCCTGCCACCTGGACCTaGGCACCTGTGGACTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: RSIHICKEGQAVCTVCQLPATWT*APVDSR Trigger: CCGGGAGTCCACAGGTGCTCAGGTCCAGGTGGCAGG...CAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR GCA 90 bp | CTTGGAAGACACCTGGAGGGCACAAGTGCCCCCTCCCCGAGATATCCCAGTGAAGGAAAGGGGGTTTGCTaGATGGCCAACTGGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LGRHLEGTSAPSPRYPSEGKGVC*MANWWS Trigger: GCTCCACCAGTTGGCCATGCAGCAAACCCCCTTTCC...TTCACTGGGATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CCA 90 bp | CTTGGAAGACACCTGGAGGGCACAAGTGCCCCCTCCCCGAGATATCCCAGTGAATGTAGCTCAGGGTGGTaGCTTAAGGTGCCGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LGRHLEGTSAPSPRYPSECSSGW*LKVPRV Trigger: CACCCTCGGCACCTTAAGCCACCACCCTGAGCTACA...TTCACTGGGATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CCA 90 bp | TATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCTGCGGGTGGCACCTTTCGGTaGGGACTCCAGCATGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: YLQGRTGSLYSVPAGEAAGGTFR*GLQHDH Trigger: GTGGTCATGCTGGAGTCCCCACCGAAAGGTGCCACC...CGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CCA 90 bp | GGCACTCTACCCTGCTCCTTAGATACACCCCCAAGTCCCTCCTCTTCCAGACACGGTGGCACCTTTCGGTaGGGACTCCAGCATGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTLPCSLDTPPSPSSSRHGGTFR*GLQHDH Trigger: GTGGTCATGCTGGAGTCCCCACCGAAAGGTGCCACC...GTGTCTGGAAGAGGAGGGACTTGGGGGTGTATCTAAGGAGCAGGGTAGAGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | GGCACTCTACCCTGCTCCTTAGATACACCCCCAAGTCCCTCCTCTTCCAGACACTTGGGCGGTAGGGAATaGTGGCACCTTTCGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTLPCSLDTPPSPSSSRHLGGRE*WHLSVG Trigger: CCCCACCGAAAGGTGCCACCATTCCCTACCGCCCAA...GTGTCTGGAAGAGGAGGGACTTGGGGGTGTATCTAAGGAGCAGGGTAGAGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCTGGTGAGGCTGCGGGCTGGAGCCATCCGATGTGTGCAGTGGAGGACCTTAAGGCTGATGTTGGCTaGGGTCCCTGTGATGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PAGEAAGWSHPMCAVEDLKADVG*GPCDGN Trigger: ATTACCATCACAGGGACCCCAGCCAACATCAGCCTT...AAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR TCA 90 bp | TCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCTGGAATGGTGAGCTCATaGGTGCTGGCCGGTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SYLQGRTGSLYSVPAGEAGMVSS*VLAGGL Trigger: CAGCCCACCGGCCAGCACTCATGAGCTCACCATTCC...AGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCTGCGGGCTGGAGCCTGGCATTGGCGATTTTaGTCTGAGCTCCAGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: EGQAVCTVCQLVRLRAGAWHWRF*SELQTS Trigger: AGATGTCTGGAGCTCAGATCAAAATCGCCAATGCCA...GGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR GCA 90 bp | TCCCCGAGATATCCCAGTGAAGTCAGGGTCCCACCCCACCCTCTGGCACTCTACGTAGGCCTGACCACCTaGAAAAATGACAGGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPRYPSEVRVPPHPLALYVGLTT*KNDRGG Trigger: TCCACCCCTGTCATTTTTGCAGGTGGTCAGGCCTAC...GTAGAGTGCCAGAGGGTGGGGTGGGACCCTGACTTCACTGGGATATCTCGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR GCA 90 bp | AGCCATCTTGGAAGACACCTGGAGGGCACAAGTGCCCCCTCCCCGAGATATCCCGTAGGCCTGACCACCTaGAAAAATGACAGGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SHLGRHLEGTSAPSPRYPVGLTT*KNDRGG Trigger: TCCACCCCTGTCATTTTTGCAGGTGGTCAGGCCTAC...GGGATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAGATGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR GCA 90 bp | GGCACTCTACCCTGCTCCTTAGATACACCCCCAAGTCCCTCCTCTTCCAGACACGGAAAGGGGGTTTGCTaGATGGCCAACTGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTLPCSLDTPPSPSSSRHGKGVC*MANWWS Trigger: GCTCCACCAGTTGGCCATGCAGCAAACCCCCTTTCC...GTGTCTGGAAGAGGAGGGACTTGGGGGTGTATCTAAGGAGCAGGGTAGAGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCTGCGGGCTGGAGCGAAGATGGCGTCAGTTaGGCCTGTGATTGTAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRTGSLYSVPAGEAAGWSEDGVS*ACDCND Trigger: ATCGTTACAATCACAGGCCCAACTGACGCCATCTTC...GCTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | GCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGGGTGGAGGCGGGCTTTaGGCGGTAGGGAATGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALFISARKDRQSVQCASWGGGGL*AVGNGG Trigger: GCCACCATTCCCTACCGCCCAAAGCCCGCCTCCACC...CCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CCA 90 bp | TCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCTTGCTGGCCGGTGGGCTaGCATCCAGACCTGACGACT | + |
|
Preference number: 4 (lower is better) Translates to: SYLQGRTGSLYSVPAGEACWPVG*HPDLTT Trigger: AGTCGTCAGGTCTGGATGCCAGCCCACCGGCCAGCA...AGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | ATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGATGAGTGCTGGCCGGTaGGCTGGCATCCAGACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: IHICKEGQAVCTVCQLVRMSAGR*AGIQTG Trigger: CCCGGTCTGGATGCCAGCCCACCGGCCAGCACTCAT...CCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173854.8 |
||
| CDS-3UTR TCA 90 bp | GAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCGTGCCGAGGGTGCTGTaGGGAAGGATGGGTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ENALFISARKDRQSVQCAVPRVL*GRMGGA Trigger: GGCCCCACCCATCCTTCCTCACAGCACCCTCGGCAC...GGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR TCA 90 bp | CCCTCCTCTTCCAGACACTCCCTGCAGGTTGCAATAAAAGTACCTCTGATCCCTGGAATGGTGAGCTCATaGGTGCTGGCCGGTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSSSRHSLQVAIKVPLIPGMVSS*VLAGGL Trigger: CAGCCCACCGGCCAGCACTCATGAGCTCACCATTCC...AGGGATCAGAGGTACTTTTATTGCAACCTGCAGGGAGTGTCTGGAAGAGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | TACACTAACACGGAGCGCACAGGGCCTGAGTGGGCAGACACGCACTATCATCTGCCAACTGGTGGAGCTTaGTCAACTGATCTGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YTNTERTGPEWADTHYHLPTGGA*STDLGG Trigger: CCCACCCAGATCAGTTGACCAAGCTCCACCAGTTGG...CAGATGATAGTGCGTGTCTGCCCACTCAGGCCCTGTGCGCTCCGTGTTAGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001148.11 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | TCCCCGAGATATCCCAGTGAAGTCAGGGTCCCACCCCACCCTCTGGCACTCTACAAGGCTGATGTTGGCTaGGGTCCCTGTGATGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPRYPSEVRVPPHPLALYKADVG*GPCDGN Trigger: ATTACCATCACAGGGACCCCAGCCAACATCAGCCTT...GTAGAGTGCCAGAGGGTGGGGTGGGACCCTGACTTCACTGGGATATCTCGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | CCATCTTGGAAGACACCTGGAGGGCACAAGTGCCCCCTCCCCGAGATATCCCAGGCGTTGATGAGATACTaGGCAAGGCTGATGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSWKTPGGHKCPLPEISQALMRY*ARLMLA Trigger: AGCCAACATCAGCCTTGCCCAGTATCTCATCAACGC...CTGGGATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAGATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CCA 90 bp | CCCTCCTCTTCCAGACACTCCCTGCAGGTTGCAATAAAAGTACCTCTGATCCCTCTGGAGGCTTGCTGGTaGCAGGGCTGTTGCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSSRHSLQVAIKVPLIPLEACW*QGCCSW Trigger: CCATGAGCAACAGCCCTGCCACCAGCAAGCCTCCAG...AGGGATCAGAGGTACTTTTATTGCAACCTGCAGGGAGTGTCTGGAAGAGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCCTCTTCCAGACACTCCCTGCAGGTTGCAATAAAAGTACCTCTGATCCCTGGCGGTAGGGAATGGTaGCACCTTTCGGTGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PSSSRHSLQVAIKVPLIPGGREW*HLSVGT Trigger: AGTCCCCACCGAAAGGTGCCACCATTCCCTACCGCC...AGGGATCAGAGGTACTTTTATTGCAACCTGCAGGGAGTGTCTGGAAGAGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | CGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGGCGGTAGGGAATGGTaGCACCTTTCGGTGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: RSIHICKEGQAVCTVCQLGGREW*HLSVGT Trigger: AGTCCCCACCGAAAGGTGCCACCATTCCCTACCGCC...CAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTCTTCCAGACACTCCCTGCAGGTTGCAATAAAAGTACCTCTGATCCCTGCTTGGGCGGTAGGGAATaGTGGCACCTTTCGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLFQTLPAGCNKSTSDPCLGGRE*WHLSVG Trigger: CCCCACCGAAAGGTGCCACCATTCCCTACCGCCCAA...GCAGGGATCAGAGGTACTTTTATTGCAACCTGCAGGGAGTGTCTGGAAGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CCA 90 bp | AAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGGGTGGAGGCGGGCTTTaGGCGGTAGGGAATGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRSIHICKEGQAVCTVCQGGGGL*AVGNGG Trigger: GCCACCATTCCCTACCGCCCAAAGCCCGCCTCCACC...CTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR TCA 90 bp | AAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGGGAATGGTGAGCTCATaGGTGCTGGCCGGTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRSIHICKEGQAVCTVCQGMVSS*VLAGGL Trigger: CAGCCCACCGGCCAGCACTCATGAGCTCACCATTCC...CTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR GCA 90 bp | CGCACAGGGCCTGAGTGGGCAGACACGCACTATCATCTGTTTGTAAAGAAAACGGGTGGTGGCTTAAGGTaGCGAGGGTGCTGTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RTGPEWADTHYHLFVKKTGGGLR*RGCCEE Trigger: TTCCTCACAGCACCCTCGGCACCTTAAGCCACCACC...CGTTTTCTTTACAAACAGATGATAGTGCGTGTCTGCCCACTCAGGCCCTGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CCA 90 bp | CTTGGAAGACACCTGGAGGGCACAAGTGCCCCCTCCCCGAGATATCCCAGTGAAGAAGATGGCGTCAGTTaGGCCTGTGATTGTAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: LGRHLEGTSAPSPRYPSEEDGVS*ACDCND Trigger: ATCGTTACAATCACAGGCCCAACTGACGCCATCTTC...TTCACTGGGATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CCA 90 bp | TATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGCTGGAGGCTTGCTGGTaGCAGGGCTGTTGCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: YSYLQGRTGSLYSVPAGELEACW*QGCCSW Trigger: CCATGAGCAACAGCCCTGCCACCAGCAAGCCTCCAG...CTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CCA 90 bp | CTCCTCTTCCAGACACTCCCTGCAGGTTGCAATAAAAGTACCTCTGATCCCTGCATCAGGGACCCACACTaGCTGGCAGGGACCACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLFQTLPAGCNKSTSDPCIRDPH*LAGTTS Trigger: ACTAGTGGTCCCTGCCAGCCAGTGTGGGTCCCTGAT...GCAGGGATCAGAGGTACTTTTATTGCAACCTGCAGGGAGTGTCTGGAAGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | TCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGGGTGGCACCTTTCGGTaGGGACTCCAGCATGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SIHICKEGQAVCTVCQLVGGTFR*GLQHDH Trigger: GTGGTCATGCTGGAGTCCCCACCGAAAGGTGCCACC...CACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CCA 90 bp | AAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGTGCTGGCCGGTGGGCTaGCATCCAGACCTGACGACT | + |
|
Preference number: 4 (lower is better) Translates to: KRSIHICKEGQAVCTVCQCWPVG*HPDLTT Trigger: AGTCGTCAGGTCTGGATGCCAGCCCACCGGCCAGCA...CTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCTGCTGGCCGGTGGGCTaGCATCCAGACCGGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKRSIHICKEGQAVCTVCCWPVG*HPDRGK Trigger: CTTTCCCCGGTCTGGATGCCAGCCCACCGGCCAGCA...GCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173854.8 |
||
| 3UTR CAA 72 bp | GATGAACTTTCTGGCAAGTCCTTGTTCTTAGCCATCTaGGAAGACACCTGGAGGGCACAAGTGCCCCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DELSGKSLFLAI*EDTWRAQVPPP Trigger: GGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAGATGGCTAAGAACAAGGACTTGCCAGAAAGTTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR TCA 90 bp | CTCCTTAGATACACCCCCAAGTCCCTCCTCTTCCAGACACTCCCTGCAGGTTGCTGGCATTGGCGATTTTaGTCTGAGCTCCAGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRYTPKSLLFQTLPAGCWHWRF*SELQTS Trigger: AGATGTCTGGAGCTCAGATCAAAATCGCCAATGCCA...GCAACCTGCAGGGAGTGTCTGGAAGAGGAGGGACTTGGGGGTGTATCTAAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | AAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGAGGCTTGCTGGTaGCAGGGCTGTTGCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KRSIHICKEGQAVCTVCQLEACW*QGCCSW Trigger: CCATGAGCAACAGCCCTGCCACCAGCAAGCCTCCAG...CTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | AAGAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGGGTGGAGGCGGGCTTTaGGCGGTAGGGAATGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KKTLYSYLQGRTGSLYSVGGGGL*AVGNGG Trigger: GCCACCATTCCCTACCGCCCAAAGCCCGCCTCCACC...CACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CCA 90 bp | CGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGCCAACTGGTGGAGCTTaGTCAACTGATCTGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSIHICKEGQAVCTVCQLPTGGA*STDLGG Trigger: CCCACCCAGATCAGTTGACCAAGCTCCACCAGTTGG...CAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001148.11 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | CGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGAATCTGGGTGGGGGATaGCGTACTGTCCCTGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: RSIHICKEGQAVCTVCQLNLGGG*RTVPGL Trigger: CAATCCAGGGACAGTACGCCATCCCCCACCCAGATT...CAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105411.9 ENSMUST00000173854.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTCTTCCAGACACTCCCTGCAGGTTGCAATAAAAGTACCTCTGATCCCTGCGTAGGCCTGACCACCTaGAAAAATGACAGGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLFQTLPAGCNKSTSDPCVGLTT*KNDRGG Trigger: TCCACCCCTGTCATTTTTGCAGGTGGTCAGGCCTAC...GCAGGGATCAGAGGTACTTTTATTGCAACCTGCAGGGAGTGTCTGGAAGAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR GCA 90 bp | GAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCGGAAAGGGGGTTTGCTaGATGGCCAACTGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ENALFISARKDRQSVQCAGKGVC*MANWWS Trigger: GCTCCACCAGTTGGCCATGCAGCAAACCCCCTTTCC...GGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CCA 90 bp | ATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGAAATGTAGCTCAGGGTaGTGGCTTAAGGTGCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IHICKEGQAVCTVCQLVRKCSSG*WLKVPR Trigger: CCTCGGCACCTTAAGCCACCACCCTGAGCTACATTT...CCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | AAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGATCAGGGACCCACACTaGCTGGCAGGGACCACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KRSIHICKEGQAVCTVCQIRDPH*LAGTTS Trigger: ACTAGTGGTCCCTGCCAGCCAGTGTGGGTCCCTGAT...CTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | TCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGTTGGTCAAATCTGGGTaGGGGATGGCGTACTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SIHICKEGQAVCTVCQLVLVKSG*GMAYCP Trigger: GGGACAGTACGCCATCCCCCACCCAGATTTGACCAA...CACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105411.9 ENSMUST00000173854.8 |
||
| CDS-3UTR TCA 90 bp | TCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGGTGGGGACTCCAGCATaGCCACACAGATCTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIHICKEGQAVCTVCQLVVGTPA*PHRSVS Trigger: TGAAACAGATCTGTGTGGTCATGCTGGAGTCCCCAC...CACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR TCA 90 bp | TATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGTGGGGACTCCAGCATaGCCACACAGATCTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YSYLQGRTGSLYSVPAGEVGTPA*PHRSVS Trigger: TGAAACAGATCTGTGTGGTCATGCTGGAGTCCCCAC...CTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR GCA 90 bp | AAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGTCTTGGAGCCACCTTTaGCGATCAGGGACCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: KRSIHICKEGQAVCTVCQSWSHL*RSGTHT Trigger: AGTGTGGGTCCCTGATCGGCAAAGGTGGCTCCAAGA...CTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | CGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGCGTTGATGAGATACTaGGCAAGGCTGATGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSIHICKEGQAVCTVCQLALMRY*ARLMLA Trigger: AGCCAACATCAGCCTTGCCCAGTATCTCATCAACGC...CAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CCA 90 bp | ATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGGCGTTGATGAGATACTaGGCAAGGCTGATGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IHICKEGQAVCTVCQLVRALMRY*ARLMLA Trigger: AGCCAACATCAGCCTTGCCCAGTATCTCATCAACGC...CCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR TCA 90 bp | AAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGATCATTGGGAATGGTaGGCTCATGAGTGCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KTLYSYLQGRTGSLYSVPDHWEW*AHECWP Trigger: CGGCCAGCACTCATGAGCTCACCATTCCCAATGATC...TGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCGATCATTGGGAATGGTaGGCTCATGAGTGCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RKRSIHICKEGQAVCTVCDHWEW*AHECWP Trigger: CGGCCAGCACTCATGAGCTCACCATTCCCAATGATC...GCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGGGTGGTGGCTTAAGGTaGCGAGGGTGCTGTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KKTLYSYLQGRTGSLYSVGGGLR*RGCCEE Trigger: TTCCTCACAGCACCCTCGGCACCTTAAGCCACCACC...CACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | TCTGTTTGTAAAGAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTGAGGAAGGATGGGTaGGGCCCAGATGGCGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SVCKENALFISARKDRQSVRKDG*GPDGVT Trigger: GGTGACGCCATCTGGGCCCCACCCATCCTTCCTCAC...AGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCTTTACAAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGACATAGGAAGTGCTGTTAAAGCATCAAACCAACTTTTAAACAGACAGGTGAGGAAGGATGGGTaGGGCCCAGATGGCGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: QQDIGSAVKASNQLLNRQVRKDG*GPDGVT Trigger: GGTGACGCCATCTGGGCCCCACCCATCCTTCCTCAC...CTGTCTGTTTAAAAGTTGGTTTGATGCTTTAACAGCACTTCCTATGTCCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | AAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGAAATGTAGCTCAGGGTaGTGGCTTAAGGTGCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRSIHICKEGQAVCTVCQKCSSG*WLKVPR Trigger: CCTCGGCACCTTAAGCCACCACCCTGAGCTACATTT...CTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | AAGAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGTCACTGGAGGCTTGCTaGTGGCAGGGCTGTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKTLYSYLQGRTGSLYSVSLEAC*WQGCCS Trigger: TGAGCAACAGCCCTGCCACCAGCAAGCCTCCAGTGA...CACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | GTAAAGAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTTTGGGCGGTAGGGAATaGTGGCACCTTTCGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VKKTLYSYLQGRTGSLYSLGGRE*WHLSVG Trigger: CCCCACCGAAAGGTGCCACCATTCCCTACCGCCCAA...ACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CCA 90 bp | TATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGAAGGCTGATGTTGGCTaGGGTCCCTGTGATGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: YSYLQGRTGSLYSVPAGEKADVG*GPCDGN Trigger: ATTACCATCACAGGGACCCCAGCCAACATCAGCCTT...CTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| 3UTR CAA 72 bp | ACTCTGATGGGTGCAGATGAACTTTCTGGCAAGTCCTaGTTCTTAGCCATCTTGGAAGACACCTGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLMGADELSGKS*FLAILEDTWRA Trigger: TGCCCTCCAGGTGTCTTCCAAGATGGCTAAGAACAAGGACTTGCCAGAAAGTTCATCTGCACCCATCAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR TCA 90 bp | GTAAAGAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTTGGGCAGTTTCCCTCTaGGATGTTGATCCTGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKKTLYSYLQGRTGSLYSWAVSL*DVDPGA Trigger: GGCGCCAGGATCAACATCTCAGAGGGAAACTGCCCA...ACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR TCA 90 bp | CTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTTGGCATTGGCGATTTTaGTCTGAGCTCCAGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LYSYLQGRTGSLYSVPAGWHWRF*SELQTS Trigger: AGATGTCTGGAGCTCAGATCAAAATCGCCAATGCCA...ACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGGAGGAAAGGGGGTTTaGTGCATGGCCAACTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KENALFISARKDRQSVQCGGKGV*CMANWW Trigger: CCACCAGTTGGCCATGCAGCAAACCCCCTTTCCTCC...ACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAGGACATAGGAAGTGCTGTTAAAGCATCAAACCAACTTTTAAACAGACAGGGTGGTGGCTTAAGGTaGCGAGGGTGCTGTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QQDIGSAVKASNQLLNRQGGGLR*RGCCEE Trigger: TTCCTCACAGCACCCTCGGCACCTTAAGCCACCACC...CTGTCTGTTTAAAAGTTGGTTTGATGCTTTAACAGCACTTCCTATGTCCTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR GCA 90 bp | AAGAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGGTAGGCCTGACCACCTaGAAAAATGACAGGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KKTLYSYLQGRTGSLYSVVGLTT*KNDRGG Trigger: TCCACCCCTGTCATTTTTGCAGGTGGTCAGGCCTAC...CACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGAAATGTAGCTCAGGGTaGTGGCTTAAGGTGCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKTLYSYLQGRTGSLYSVKCSSG*WLKVPR Trigger: CCTCGGCACCTTAAGCCACCACCCTGAGCTACATTT...CACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CCA 90 bp | AAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAAAGGCTGATGTTGGCTaGGGTCCCTGTGATGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: KTLYSYLQGRTGSLYSVPKADVG*GPCDGN Trigger: ATTACCATCACAGGGACCCCAGCCAACATCAGCCTT...TGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCGCGTTGATGAGATACTaGGCAAGGCTGATGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKRSIHICKEGQAVCTVCALMRY*ARLMLA Trigger: AGCCAACATCAGCCTTGCCCAGTATCTCATCAACGC...GCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGGAAGATGGCGTCAGTTaGGCCTGTGATTGTAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: KKTLYSYLQGRTGSLYSVEDGVS*ACDCND Trigger: ATCGTTACAATCACAGGCCCAACTGACGCCATCTTC...CACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CAA 90 bp | CAGCTGGTGAGGCTGCGGGCTGGAGCCATCCGATGTGTGCAGTGGAGGACCTTGGGGTGGAGGCGGGCTTaGGGCGGTAGGGAATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QLVRLRAGAIRCVQWRTLGWRRA*GGREWW Trigger: CCACCATTCCCTACCGCCCAAAGCCCGCCTCCACCC...CAAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTGAGGCTGCGGGCTGGAGCCATCCGATGTGTGCAGTGGAGGACCTTGGGTTGGGCAAGGCTGATGTaGGCTGGGGTCCCTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LVRLRAGAIRCVQWRTLGWARLM*AGVPVM Trigger: CATCACAGGGACCCCAGCCAACATCAGCCTTGCCCA...ACCCAAGGTCCTCCACTGCACACATCGGATGGCTCCAGCCCGCAGCCTCACCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCTGCGGGCTGGTGGGCAAGGCTGATGTaGGCTGGGGTCCCTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QGRTGSLYSVPAGEAAGWWARLM*AGVPVM Trigger: CATCACAGGGACCCCAGCCAACATCAGCCTTGCCCA...CCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCTGCGGGCTGGAGCCGACGTCAGCCTAGCGTaGATGAGATACTGGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EGQAVCTVCQLVRLRAGADVSLA*MRYWAR Trigger: CCTTGCCCAGTATCTCATCAACGCTAGGCTGACGTC...GGCTCCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CAA 90 bp | TCCCCGAGATATCCCAGTGAAGTCAGGGTCCCACCCCACCCTCTGGCACTCTACATCTTGGAGCCACCTTaGCCGATCAGGGACCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: SPRYPSEVRVPPHPLALYILEPP*PIRDPH Trigger: GTGTGGGTCCCTGATCGGCAAAGGTGGCTCCAAGAT...GTAGAGTGCCAGAGGGTGGGGTGGGACCCTGACTTCACTGGGATATCTCGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CAA 90 bp | AGCCATCTTGGAAGACACCTGGAGGGCACAAGTGCCCCCTCCCCGAGATATCCCCGTACTGTCCCTGGATaGTGTAGGCCTGACCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: SHLGRHLEGTSAPSPRYPRTVPG*CRPDHL Trigger: CAGGTGGTCAGGCCTACACAATCCAGGGACAGTACG...GGGATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAGATGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CAA 90 bp | CTTGGAAGACACCTGGAGGGCACAAGTGCCCCCTCCCCGAGATATCCCAGTGAACGTACTGTCCCTGGATaGTGTAGGCCTGACCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGRHLEGTSAPSPRYPSERTVPG*CRPDHL Trigger: CAGGTGGTCAGGCCTACACAATCCAGGGACAGTACG...TTCACTGGGATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CAA 90 bp | TATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCTGCGGGGAGGAAAGGGGGTTaGCTGCATGGCCAACTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YLQGRTGSLYSVPAGEAAGRKGG*LHGQLV Trigger: CACCAGTTGGCCATGCAGCAAACCCCCTTTCCTCCC...CGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CAA 90 bp | TACACTAACACGGAGCGCACAGGGCCTGAGTGGGCAGACACGCACTATCATCTGGGGAGGAAAGGGGGTTaGCTGCATGGCCAACTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YTNTERTGPEWADTHYHLGRKGG*LHGQLV Trigger: CACCAGTTGGCCATGCAGCAAACCCCCTTTCCTCCC...CAGATGATAGTGCGTGTCTGCCCACTCAGGCCCTGTGCGCTCCGTGTTAGTGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CAA 90 bp | TACACTAACACGGAGCGCACAGGGCCTGAGTGGGCAGACACGCACTATCATCTGTGGGCAAGGCTGATGTaGGCTGGGGTCCCTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: YTNTERTGPEWADTHYHLWARLM*AGVPVM Trigger: CATCACAGGGACCCCAGCCAACATCAGCCTTGCCCA...CAGATGATAGTGCGTGTCTGCCCACTCAGGCCCTGTGCGCTCCGTGTTAGTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CAA 90 bp | TACACTAACACGGAGCGCACAGGGCCTGAGTGGGCAGACACGCACTATCATCTGATCTTGGAGCCACCTTaGCCGATCAGGGACCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: YTNTERTGPEWADTHYHLILEPP*PIRDPH Trigger: GTGTGGGTCCCTGATCGGCAAAGGTGGCTCCAAGAT...CAGATGATAGTGCGTGTCTGCCCACTCAGGCCCTGTGCGCTCCGTGTTAGTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CAA 90 bp | TATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGGGTGGAGGCGGGCTTaGGGCGGTAGGGAATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YSYLQGRTGSLYSVPAGEGWRRA*GGREWW Trigger: CCACCATTCCCTACCGCCCAAAGCCCGCCTCCACCC...CTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGCTCCTTAGATACACCCCCAAGTCCCTCCTCTTCCAGACACTCCCTGCAGGACGTCAGCCTAGCGTaGATGAGATACTGGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PCSLDTPPSPSSSRHSLQDVSLA*MRYWAR Trigger: CCTTGCCCAGTATCTCATCAACGCTAGGCTGACGTC...CTGCAGGGAGTGTCTGGAAGAGGAGGGACTTGGGGGTGTATCTAAGGAGCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CAA 90 bp | TACACTAACACGGAGCGCACAGGGCCTGAGTGGGCAGACACGCACTATCATCTGGACTCCCGGATCTCCTaGATCTTGGAGCCACCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: YTNTERTGPEWADTHYHLDSRIS*ILEPPL Trigger: CAAAGGTGGCTCCAAGATCAAGGAGATCCGGGAGTC...CAGATGATAGTGCGTGTCTGCCCACTCAGGCCCTGTGCGCTCCGTGTTAGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
||
| CDS-3UTR CAA 90 bp | AAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGGGGTGGAGGCGGGCTTaGGGCGGTAGGGAATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KRSIHICKEGQAVCTVCQGWRRA*GGREWW Trigger: CCACCATTCCCTACCGCCCAAAGCCCGCCTCCACCC...CTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCGGGTGGAGGCGGGCTTaGGGCGGTAGGGAATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RKRSIHICKEGQAVCTVCGWRRA*GGREWW Trigger: CCACCATTCCCTACCGCCCAAAGCCCGCCTCCACCC...GCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCTGCGGGCTGGCGGATTTCATTGATTTaGGTGCCTTGGCGTCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: QGRTGSLYSVPAGEAAGWRISLI*VPWRPI Trigger: AATTGGACGCCAAGGCACCAAAATCAATGAAATCCG...CCAGCCCGCAGCCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR CAA 90 bp | CCATCTTGGAAGACACCTGGAGGGCACAAGTGCCCCCTCCCCGAGATATCCCAGATGTCCTCCTCAAACTaGTACGCGATCATAGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: PSWKTPGGHKCPLPEISQMSSSN*YAIIAK Trigger: CTTTGCTATGATCGCGTACAAGTTTGAGGAGGACAT...CTGGGATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAGATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CAA 90 bp | CGCACAGGGCCTGAGTGGGCAGACACGCACTATCATCTGTTTGTAAAGAAAACGCGTACTGTCCCTGGATaGTGTAGGCCTGACCACCTG | + |
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Preference number: 5 (lower is better) Translates to: RTGPEWADTHYHLFVKKTRTVPG*CRPDHL Trigger: CAGGTGGTCAGGCCTACACAATCCAGGGACAGTACG...CGTTTTCTTTACAAACAGATGATAGTGCGTGTCTGCCCACTCAGGCCCTGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CAA 90 bp | ATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGCGTACTGTCCCTGGATaGTGTAGGCCTGACCACCTG | + |
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Preference number: 5 (lower is better) Translates to: IHICKEGQAVCTVCQLVRRTVPG*CRPDHL Trigger: CAGGTGGTCAGGCCTACACAATCCAGGGACAGTACG...CCTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR CAA 90 bp | CTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGGGAGGAAAGGGGGTTaGCTGCATGGCCAACTGGTG | + |
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Preference number: 5 (lower is better) Translates to: LYSYLQGRTGSLYSVPAGGRKGG*LHGQLV Trigger: CACCAGTTGGCCATGCAGCAAACCCCCTTTCCTCCC...ACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR CAA 90 bp | CTTGGAAGACACCTGGAGGGCACAAGTGCCCCCTCCCCGAGATATCCCAGTGAAATGTCCTCCTCAAACTaGTACGCGATCATAGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: LGRHLEGTSAPSPRYPSEMSSSN*YAIIAK Trigger: CTTTGCTATGATCGCGTACAAGTTTGAGGAGGACAT...TTCACTGGGATATCTCGGGGAGGGGGCACTTGTGCCCTCCAGGTGTCTTCCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CAA 90 bp | TCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGATCTTGGAGCCACCTTaGCCGATCAGGGACCCACAC | + |
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Preference number: 5 (lower is better) Translates to: SIHICKEGQAVCTVCQLVILEPP*PIRDPH Trigger: GTGTGGGTCCCTGATCGGCAAAGGTGGCTCCAAGAT...CACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CAA 90 bp | TATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGAGGACTCCCGGATCTCCTaGATCTTGGAGCCACCTTTG | + |
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Preference number: 5 (lower is better) Translates to: YSYLQGRTGSLYSVPAGEDSRIS*ILEPPL Trigger: CAAAGGTGGCTCCAAGATCAAGGAGATCCGGGAGTC...CTCACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CAA 90 bp | GCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGCTGGTGGCAGGGCTGTaGCTCATGGAATTAATGATG | + |
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Preference number: 5 (lower is better) Translates to: ALFISARKDRQSVQCASWLVAGL*LMELMM Trigger: CATCATTAATTCCATGAGCAACAGCCCTGCCACCAG...CCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CAA 90 bp | TCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGCTGGTGGCAGGGCTGTaGCTCATGGAATTAATGATG | + |
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Preference number: 5 (lower is better) Translates to: SIHICKEGQAVCTVCQLVLVAGL*LMELMM Trigger: CATCATTAATTCCATGAGCAACAGCCCTGCCACCAG...CACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CAA 90 bp | AAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGACTCCCGGATCTCCTaGATCTTGGAGCCACCTTTG | + |
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Preference number: 5 (lower is better) Translates to: KTLYSYLQGRTGSLYSVPDSRIS*ILEPPL Trigger: CAAAGGTGGCTCCAAGATCAAGGAGATCCGGGAGTC...TGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CAA 90 bp | AGAAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCGACGTCAGCCTAGCGTaGATGAGATACTGGGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: RKRSIHICKEGQAVCTVCDVSLA*MRYWAR Trigger: CCTTGCCCAGTATCTCATCAACGCTAGGCTGACGTC...GCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR CAA 90 bp | TCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTGCGGATTTCATTGATTTaGGTGCCTTGGCGTCCAATT | + |
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Preference number: 5 (lower is better) Translates to: SIHICKEGQAVCTVCQLVRISLI*VPWRPI Trigger: AATTGGACGCCAAGGCACCAAAATCAATGAAATCCG...CACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR CAA 90 bp | CTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAGCTGGTCGGATTTCATTGATTTaGGTGCCTTGGCGTCCAATT | + |
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Preference number: 5 (lower is better) Translates to: LYSYLQGRTGSLYSVPAGRISLI*VPWRPI Trigger: AATTGGACGCCAAGGCACCAAAATCAATGAAATCCG...ACCAGCTGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS-3UTR CAA 90 bp | AAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCAATGTCCTCCTCAAACTaGTACGCGATCATAGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: KTLYSYLQGRTGSLYSVPMSSSN*YAIIAK Trigger: CTTTGCTATGATCGCGTACAAGTTTGAGGAGGACAT...TGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS-3UTR CAA 90 bp | AAAACGCTCTATTCATATCTGCAAGGAAGGACAGGCAGTCTGTACAGTGTGCCACGGATTTCATTGATTTaGGTGCCTTGGCGTCCAATT | + |
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Preference number: 5 (lower is better) Translates to: KTLYSYLQGRTGSLYSVPRISLI*VPWRPI Trigger: AATTGGACGCCAAGGCACCAAAATCAATGAAATCCG...TGGCACACTGTACAGACTGCCTGTCCTTCCTTGCAGATATGAATAGAGCGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS TCA 72 bp | CTCATGAGTGCTGGCCGGTGGGCTGGCATCCAGACCTaGCGACTGGCCCATCAGATTTTGAGCTTCTTCGGA | + |
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Preference number: 6 (lower is better) Translates to: LMSAGRWAGIQT*RLAHQILSFFG Trigger: TCCGAAGAAGCTCAAAATCTGATGGGCCAGTCGTCAGGTCTGGATGCCAGCCCACCGGCCAGCACTCATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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| CDS CCA 72 bp | AGGCTGATGTTGGCTGGGGTCCCTGTGATGGTAATCTaGCGCTCTGACGACCCTTCAGTGGCATTGGCGATT | + |
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Preference number: 6 (lower is better) Translates to: RLMLAGVPVMVI*RSDDPSVALAI Trigger: AATCGCCAATGCCACTGAAGGGTCGTCAGAGCGCCAGATTACCATCACAGGGACCCCAGCCAACATCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS CCA 72 bp | GTGACCTCAGACGTCAGCCTAGCGTTGATGAGATACTaGGCAAGGCTGATGTTGGCTGGGGTCCCTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: VTSDVSLALMRY*ARLMLAGVPVM Trigger: CATCACAGGGACCCCAGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCTAGGCTGACGTCTGAGGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 ENSMUST00000173854.8 |
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| CDS TCA 72 bp | CTGGCATCCAGACCTGACGACTGGCCCATCAGATTTTaGGCTTCTTCGGAGGAGTGTAAAGGCAGCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LASRPDDWPIRF*ASSEECKGSFS Trigger: AGAAAAGCTGCCTTTACACTCCTCCGAAGAAGCTCAAAATCTGATGGGCCAGTCGTCAGGTCTGGATGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001148.11 ENSMUST00000105411.9 ENSMUST00000168465.9 |
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