Pregenerated sensors for PBX4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031860Ensembl transcript IDs: ENSMUST00000081503.13, ENSMUST00000131637.9, ENSMUST00000132899.8, ENSMUST00000134777.10, ENSMUST00000156319.8
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGTCACTTCCATTGGTCAGTGGCAAGGGGCCACAGGGACCTGGGCTaGGTGTGGACTGGCAGCTGCTCTGACCCCTGGGACGCCGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: RHFHWSVARGHRDLG*VWTGSCSDPWDAGP Trigger: AGGCCCGGCGTCCCAGGGGTCAGAGCAGCTGCCAGTCCACACCCAGCCCAGGTCCCTGTGGCCCCTTGCCACTGACCAATGGAAGTGACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR GCA 90 bp | TCCAGGAACCGTGAGCGTAGAGTCATCACAGCCTCACACGTGCTCTaGTTCAGCTGCCTCTGGATGGCACTGAACTTGCTCTGGATGGTG | + |
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Preference number: 1 (lower is better) Translates to: SRNRERRVITASHVL*FSCLWMALNLLWMV Trigger: CACCATCCAGAGCAAGTTCAGTGCCATCCAGAGGCAGCTGAAGCAGAGCACGTGTGAGGCTGTGATGACTCTACGCTCACGGTTCCTGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156319.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTGGGGCGGCCCTCTGCCAGTTACTATGGACCAGGGGCTGTAGGCAGACTGACGCCGGGCCTTGGTaGCTGTGGATGCTTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: GCGAALCQLLWTRGCRQTDAGPW*LWMLSL Trigger: CAGGGAAAGCATCCACAGTCACCAAGGCCCGGCGTC...AGTCTGCCTACAGCCCCTGGTCCATAGTAACTGGCAGAGGGCCGCCCCACAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR TCA 90 bp | CCACGTCACTTCCATTGGTCAGTGGCAAGGGGCCACAGGGACCTGGGCTGGGTGCTGTGGCCTGCTTGCTaGAATTCCGCCGCTTGCGCC | + |
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Preference number: 2 (lower is better) Translates to: PRHFHWSVARGHRDLGWVLWPAC*NSAACA Trigger: GGCGCAAGCGGCGGAATTTCAGCAAGCAGGCCACAG...CACCCAGCCCAGGTCCCTGTGGCCCCTTGCCACTGACCAATGGAAGTGACGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156319.8 |
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| 3UTR-3UTR TCA 90 bp | CCGCAGGTGATGAGGCTGGCTGTGGGGCGGCCCTCTGCCAGTTACTATGGACCAGGGAGGCAAGTGGCCTaGAAAAGGGCAAAGCCGCAG | + |
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Preference number: 2 (lower is better) Translates to: PQVMRLAVGRPSASYYGPGRQVA*KRAKPQ Trigger: CTGCGGCTTTGCCCTTTTTCAGGCCACTTGCCTCCC...TGGTCCATAGTAACTGGCAGAGGGCCGCCCCACAGCCAGCCTCATCACCTGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CCA 90 bp | GTGATGAGGCTGGCTGTGGGGCGGCCCTCTGCCAGTTACTATGGACCAGGGGCTAGGTGGGGAGGCAAGTaGCCTGAAAAAGGGCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: VMRLAVGRPSASYYGPGARWGGK*PEKGQS Trigger: GCTTTGCCCTTTTTCAGGCCACTTGCCTCCCCACCT...AGCCCCTGGTCCATAGTAACTGGCAGAGGGCCGCCCCACAGCCAGCCTCATCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CCA 90 bp | CGTCACTTCCATTGGTCAGTGGCAAGGGGCCACAGGGACCTGGGCTGGGTGTGGAGGTGGGGAGGCAAGTaGCCTGAAAAAGGGCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: RHFHWSVARGHRDLGWVWRWGGK*PEKGQS Trigger: GCTTTGCCCTTTTTCAGGCCACTTGCCTCCCCACCT...CCACACCCAGCCCAGGTCCCTGTGGCCCCTTGCCACTGACCAATGGAAGTGACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAAAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCAGGACACAGGGGGCCACAGGGACCTaGGCTGGGTGTGGACTGGCA | + |
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Preference number: 2 (lower is better) Translates to: LKKGKAAARTSEVISRTQGATGT*AGCGLA Trigger: TGCCAGTCCACACCCAGCCCAGGTCCCTGTGGCCCC...CTGTGTCCTGCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTTTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGACCTGGGCTGGGTGTGGACTGGCAGCTGCTCTGACCCCTGGGACGCCGGGATGGTGGCTTCTTCCTaGAACTTCCCTGTATTCTTT | + |
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Preference number: 2 (lower is better) Translates to: RDLGWVWTGSCSDPWDAGMVASS*NFPVFF Trigger: AAAGAATACAGGGAAGTTTCAGGAAGAAGCCACCAT...CCCGGCGTCCCAGGGGTCAGAGCAGCTGCCAGTCCACACCCAGCCCAGGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR GCA 90 bp | GGACGCCGGGCCTTGGTGACTGTGGATGCTTTCCCTGTGTACATGGTGGCTTCTTGTGGGGCGGCCCTCTaGCAGTTACTATGGACCAGG | + |
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Preference number: 2 (lower is better) Translates to: GRRALVTVDAFPVYMVASCGAAL*QLLWTR Trigger: CCTGGTCCATAGTAACTGGCAGAGGGCCGCCCCACA...AGAAGCCACCATGTACACAGGGAAAGCATCCACAGTCACCAAGGCCCGGCGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGAAAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCAGGACAGGGAGGCAAGTGGCCTaGAAAAGGGCAAAGCCGCAG | + |
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Preference number: 2 (lower is better) Translates to: GLKKGKAAARTSEVISRTGRQVA*KRAKPQ Trigger: CTGCGGCTTTGCCCTTTTTCAGGCCACTTGCCTCCC...TGTCCTGCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTTTCAGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000081503.13 ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CCA 90 bp | CCACGTCACTTCCATTGGTCAGTGGCAAGGGGCCACAGGGACCTGGGCTGGGTGAAAATCACACCAAGGTaGGGAGGCAAGTGGCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: PRHFHWSVARGHRDLGWVKITPR*GGKWPE Trigger: TTCAGGCCACTTGCCTCCCCACCTTGGTGTGATTTT...CACCCAGCCCAGGTCCCTGTGGCCCCTTGCCACTGACCAATGGAAGTGACGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGACCCCTGGGACGCCGGGCCTTGGTGACTGTGGATGCTTTCCCTGTGTAAACCAGTTAGAGACCTaGGACACTGTGATGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: ALTPGTPGLGDCGCFPCVNQLET*DTVMPP Trigger: GGGTGGCATCACAGTGTCCCAGGTCTCTAACTGGTT...TACACAGGGAAAGCATCCACAGTCACCAAGGCCCGGCGTCCCAGGGGTCAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTGGGGCGGCCCTCTGCCAGTTACTATGGACCAGGGGCTGTAGGCAGACTCTTGGTGACTGTGGATaGTTTCCCTGTGTACATGGT | + |
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Preference number: 2 (lower is better) Translates to: GCGAALCQLLWTRGCRQTLGDCG*FPCVHG Trigger: ACCATGTACACAGGGAAAGCATCCACAGTCACCAAG...AGTCTGCCTACAGCCCCTGGTCCATAGTAACTGGCAGAGGGCCGCCCCACAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CCA 90 bp | GTCACCTATGGCACTCAGCCAGGTGCCAGAAACTTAATTAGATGCAGCATCCCAGGGGCCACAGGGACCTaGGCTGGGTGTGGACTGGCA | + |
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Preference number: 2 (lower is better) Translates to: VTYGTQPGARNLIRCSIPGATGT*AGCGLA Trigger: TGCCAGTCCACACCCAGCCCAGGTCCCTGTGGCCCC...TGGGATGCTGCATCTAATTAAGTTTCTGGCACCTGGCTGAGTGCCATAGGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR GCA 90 bp | GGACGCCGGGCCTTGGTGACTGTGGATGCTTTCCCTGTGTACATGGTGGCTTCTCTTGGTGACTGTGGATaGTTTCCCTGTGTACATGGT | + |
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Preference number: 2 (lower is better) Translates to: GRRALVTVDAFPVYMVASLGDCG*FPCVHG Trigger: ACCATGTACACAGGGAAAGCATCCACAGTCACCAAG...AGAAGCCACCATGTACACAGGGAAAGCATCCACAGTCACCAAGGCCCGGCGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGCCAGGTGCCAGAAACTTAATTAGATGCAGCATCCCAATTGAAGCTGCCACTTCCATTGGTCAGTaGCAAGGGGCCACAGGGACC | + |
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Preference number: 2 (lower is better) Translates to: TQPGARNLIRCSIPIEAATSIGQ*QGATGT Trigger: GGTCCCTGTGGCCCCTTGCCACTGACCAATGGAAGT...GGCAGCTTCAATTGGGATGCTGCATCTAATTAAGTTTCTGGCACCTGGCTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGATGCTTTCCCTGTGTACATGGTGGCTTCTTCCTGAAACTTCCCTGTATACTTCCATTGGTCAGTaGCAAGGGGCCACAGGGACC | + |
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Preference number: 2 (lower is better) Translates to: LWMLSLCTWWLLPETSLYTSIGQ*QGATGT Trigger: GGTCCCTGTGGCCCCTTGCCACTGACCAATGGAAGT...ATACAGGGAAGTTTCAGGAAGAAGCCACCATGTACACAGGGAAAGCATCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR TCA 90 bp | TATGGCACTCAGCCAGGTGCCAGAAACTTAATTAGATGCAGCATCCCAATTGAAGGGAGGCAAGTGGCCTaGAAAAGGGCAAAGCCGCAG | + |
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Preference number: 2 (lower is better) Translates to: YGTQPGARNLIRCSIPIEGRQVA*KRAKPQ Trigger: CTGCGGCTTTGCCCTTTTTCAGGCCACTTGCCTCCC...TTCAATTGGGATGCTGCATCTAATTAAGTTTCTGGCACCTGGCTGAGTGCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CCA 90 bp | TATGGCACTCAGCCAGGTGCCAGAAACTTAATTAGATGCAGCATCCCAATTGAACCACGTCACTTCCATTaGTCAGTGGCAAGGGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: YGTQPGARNLIRCSIPIEPRHFH*SVARGH Trigger: GTGGCCCCTTGCCACTGACCAATGGAAGTGACGTGG...TTCAATTGGGATGCTGCATCTAATTAAGTTTCTGGCACCTGGCTGAGTGCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTCAAAACTTTAATCGGGTGCTCAGAATGAACAGTCCACTGTCAGTCACTAGGTGGGGAGGCAAGTaGCCTGAAAAAGGGCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: TGQNFNRVLRMNSPLSVTRWGGK*PEKGQS Trigger: GCTTTGCCCTTTTTCAGGCCACTTGCCTCCCCACCT...AGTGACTGACAGTGGACTGTTCATTCTGAGCACCCGATTAAAGTTTTGACCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000081503.13 ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCAGCCAGGTGCCAGAAACTTAATTAGATGCAGCATCCCAATTGAAGCTGCCCTTGGTGACTGTGGATaGTTTCCCTGTGTACATGGT | + |
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Preference number: 2 (lower is better) Translates to: TQPGARNLIRCSIPIEAALGDCG*FPCVHG Trigger: ACCATGTACACAGGGAAAGCATCCACAGTCACCAAG...GGCAGCTTCAATTGGGATGCTGCATCTAATTAAGTTTCTGGCACCTGGCTGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CCA 90 bp | TCGGGTGCTCAGAATGAACAGTCCACTGTCAGTCACTTAACTGATGTTTCTTTAAGGTGGGGAGGCAAGTaGCCTGAAAAAGGGCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: SGAQNEQSTVSHLTDVSLRWGGK*PEKGQS Trigger: GCTTTGCCCTTTTTCAGGCCACTTGCCTCCCCACCT...TAAAGAAACATCAGTTAAGTGACTGACAGTGGACTGTTCATTCTGAGCACCCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000081503.13 ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CCA 90 bp | TATGGCACTCAGCCAGGTGCCAGAAACTTAATTAGATGCAGCATCCCAATTGAAAACCAGTTAGAGACCTaGGACACTGTGATGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: YGTQPGARNLIRCSIPIENQLET*DTVMPP Trigger: GGGTGGCATCACAGTGTCCCAGGTCTCTAACTGGTT...TTCAATTGGGATGCTGCATCTAATTAAGTTTCTGGCACCTGGCTGAGTGCCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CAA 90 bp | CGTCACTTCCATTGGTCAGTGGCAAGGGGCCACAGGGACCTGGGCTGGGTGTGGCTGGGACGCCGGGCCTaGGTGACTGTGGATGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: RHFHWSVARGHRDLGWVWLGRRA*VTVDAF Trigger: GAAAGCATCCACAGTCACCAAGGCCCGGCGTCCCAG...CCACACCCAGCCCAGGTCCCTGTGGCCCCTTGCCACTGACCAATGGAAGTGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CAA 90 bp | GTGATGAGGCTGGCTGTGGGGCGGCCCTCTGCCAGTTACTATGGACCAGGGGCTCTGGGACGCCGGGCCTaGGTGACTGTGGATGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: VMRLAVGRPSASYYGPGALGRRA*VTVDAF Trigger: GAAAGCATCCACAGTCACCAAGGCCCGGCGTCCCAG...AGCCCCTGGTCCATAGTAACTGGCAGAGGGCCGCCCCACAGCCAGCCTCATCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CAA 90 bp | CCCGCAGGTGATGAGGCTGGCTGTGGGGCGGCCCTCTGCCAGTTACTATGGACCCTGAAATTCCGCCGCTaGCGCCTGGCATCCAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: PAGDEAGCGAALCQLLWTLKFRR*RLASRN Trigger: GTTCCTGGATGCCAGGCGCAAGCGGCGGAATTTCAG...GGTCCATAGTAACTGGCAGAGGGCCGCCCCACAGCCAGCCTCATCACCTGCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156319.8 |
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| 3UTR-3UTR CAA 90 bp | GTCACTTCCATTGGTCAGTGGCAAGGGGCCACAGGGACCTGGGCTGGGTGTGGACTGGGACGCCGGGCCTaGGTGACTGTGGATGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: VTSIGQWQGATGTWAGCGLGRRA*VTVDAF Trigger: GAAAGCATCCACAGTCACCAAGGCCCGGCGTCCCAG...TCCACACCCAGCCCAGGTCCCTGTGGCCCCTTGCCACTGACCAATGGAAGTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CAA 90 bp | CGTCACTTCCATTGGTCAGTGGCAAGGGGCCACAGGGACCTGGGCTGGGTGTGGGATGCAGCATCCCAATaGAAGCTGCCAGACTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: RHFHWSVARGHRDLGWVWDAASQ*KLPDSP Trigger: GGGAGAGTCTGGCAGCTTCAATTGGGATGCTGCATC...CCACACCCAGCCCAGGTCCCTGTGGCCCCTTGCCACTGACCAATGGAAGTGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR GCA 72 bp | CTGACCCCTGGGACGCCGGGCCTTGGTGACTGTGGATaGTTTCCCTGTGTACATGGTGGCTTCTTCCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: LTPGTPGLGDCG*FPCVHGGFFLK Trigger: TTTCAGGAAGAAGCCACCATGTACACAGGGAAAGCATCCACAGTCACCAAGGCCCGGCGTCCCAGGGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CAA 90 bp | CCACGTCACTTCCATTGGTCAGTGGCAAGGGGCCACAGGGACCTGGGCTGGGTGTTCCCTGTATTCTTTTaGTACCGGATTCTTTTGTTG | + |
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Preference number: 3 (lower is better) Translates to: PRHFHWSVARGHRDLGWVFPVFF*YRILLL Trigger: CAACAAAAGAATCCGGTACAAAAAGAATACAGGGAA...CACCCAGCCCAGGTCCCTGTGGCCCCTTGCCACTGACCAATGGAAGTGACGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CAA 90 bp | ACTCAGCCAGGTGCCAGAAACTTAATTAGATGCAGCATCCCAATTGAAGCTGCCACGTCTGTGGCCTGCTaGCTGAAATTCCGCCGCTTG | + |
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Preference number: 3 (lower is better) Translates to: TQPGARNLIRCSIPIEAATSVAC*LKFRRL Trigger: CAAGCGGCGGAATTTCAGCAAGCAGGCCACAGACGT...GGCAGCTTCAATTGGGATGCTGCATCTAATTAAGTTTCTGGCACCTGGCTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156319.8 |
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| 3UTR GCA 72 bp | TATGGCACTCAGCCAGGTGCCAGAAACTTAATTAGATaGAGCATCCCAATTGAAGCTGCCAGACTCTCCCGC | + |
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Preference number: 3 (lower is better) Translates to: YGTQPGARNLIR*SIPIEAARLSR Trigger: GCGGGAGAGTCTGGCAGCTTCAATTGGGATGCTGCATCTAATTAAGTTTCTGGCACCTGGCTGAGTGCCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGGTCAAAACTTTAATCGGGTGCTCAGAATGAACAGTCCACTGTCAGTCACTTTCCCTGTATTCTTTTaGTACCGGATTCTTTTGTTG | + |
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Preference number: 3 (lower is better) Translates to: TGQNFNRVLRMNSPLSVTFPVFF*YRILLL Trigger: CAACAAAAGAATCCGGTACAAAAAGAATACAGGGAA...AGTGACTGACAGTGGACTGTTCATTCTGAGCACCCGATTAAAGTTTTGACCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| CDS-3UTR TCA 90 bp | GCAAGTGGCCTGAAAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCGACTGGCAGCTGCTCTaGCCCCTGGGACGCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: ASGLKKGKAAARTSEVISDWQLL*PLGRRA Trigger: GGCCCGGCGTCCCAGGGGTCAGAGCAGCTGCCAGTC...GCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTTTCAGGCCACTTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CCA 90 bp | AGGCTGGCTGTGGGGCGGCCCTCTGCCAGTTACTATGGACCAGGGGCTGTAGGCTCAGGGCATGCTTTCTaGCCTGAGCCTCGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RLAVGRPSASYYGPGAVGSGHAF*PEPRPG Trigger: GCCTGGACGAGGCTCAGGCCAGAAAGCATGCCCTGA...GCCTACAGCCCCTGGTCCATAGTAACTGGCAGAGGGCCGCCCCACAGCCAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| 3UTR CAA 72 bp | GCCAGGGTCCGCAGAGTGAGAACCACGTCACTTCCATaGGTCAGTGGCAAGGGGCCACAGGGACCTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: ARVRRVRTTSLP*VSGKGPQGPGL Trigger: CAGCCCAGGTCCCTGTGGCCCCTTGCCACTGACCAATGGAAGTGACGTGGTTCTCACTCTGCGGACCCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| CDS-3UTR TCA 90 bp | CTGAGGTCATCAGCAGGACACAGGGCCAGTCACCTATGGCACTCAGCCAGGTGCCTGTGGCCTGCTTGCTaGAATTCCGCCGCTTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: LRSSAGHRASHLWHSARCLWPAC*NSAACA Trigger: GGCGCAAGCGGCGGAATTTCAGCAAGCAGGCCACAG...GCACCTGGCTGAGTGCCATAGGTGACTGGCCCTGTGTCCTGCTGATGACCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081503.13 ENSMUST00000134777.10 |
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| CDS-3UTR GCA 90 bp | GCTGTGGGGCGGCCCTCTGCCAGTTACTATGGACCAGGGGCTGTAGGCAGACTCAGCACGTCTGTGGCCTaGTTGCTGAAATTCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: AVGRPSASYYGPGAVGRLSTSVA*LLKFRR Trigger: GCGGCGGAATTTCAGCAAGCAGGCCACAGACGTGCT...GAGTCTGCCTACAGCCCCTGGTCCATAGTAACTGGCAGAGGGCCGCCCCACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134777.10 |
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| CDS-3UTR CCA 90 bp | GGACTTCTGAGGTCATCAGCAGGACACAGGGCCAGTCACCTATGGCACTCAGCCTCCGCCGCTTGCGCCTaGCATCCAGGAACCGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: GLLRSSAGHRASHLWHSASAACA*HPGTVS Trigger: GCTCACGGTTCCTGGATGCCAGGCGCAAGCGGCGGA...GGCTGAGTGCCATAGGTGACTGGCCCTGTGTCCTGCTGATGACCTCAGAAGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CCA 90 bp | GCAAGTGGCCTGAAAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCGGGGCCACAGGGACCTaGGCTGGGTGTGGACTGGCA | + |
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Preference number: 4 (lower is better) Translates to: ASGLKKGKAAARTSEVISGATGT*AGCGLA Trigger: TGCCAGTCCACACCCAGCCCAGGTCCCTGTGGCCCC...GCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTTTCAGGCCACTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR TCA 90 bp | GCCAGGACTTCTGAGGTCATCAGCAGGACACAGGGCCAGTCACCTATGGCACTCCTGTGGCCTGCTTGCTaGAATTCCGCCGCTTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: ARTSEVISRTQGQSPMALLWPAC*NSAACA Trigger: GGCGCAAGCGGCGGAATTTCAGCAAGCAGGCCACAG...GAGTGCCATAGGTGACTGGCCCTGTGTCCTGCTGATGACCTCAGAAGTCCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081503.13 ENSMUST00000134777.10 |
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| CDS-3UTR GCA 90 bp | CGTCACTTCCATTGGTCAGTGGCAAGGGGCCACAGGGACCTGGGCTGGGTGTGGATGGCCATGATCTGCTaGAGGACGTCGCTCGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RHFHWSVARGHRDLGWVWMAMIC*RTSLVS Trigger: TGACACGAGCGACGTCCTGCAGCAGATCATGGCCAT...CCACACCCAGCCCAGGTCCCTGTGGCCCCTTGCCACTGACCAATGGAAGTGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| CDS-3UTR GCA 90 bp | AAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCAGGACACAGGGCCCTGGTGTTGCTGTGCTaGCTGCTGCTGCTCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRAKPQPGLLRSSAGHRALVLLC*LLLLLG Trigger: GCCGAGGAGCAGCAGCAGGCAGCACAGCAACACCAG...GGCCCTGTGTCCTGCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CCA 90 bp | AGAACCACGTCACTTCCATTGGTCAGTGGCAAGGGGCCACAGGGACCTGGGCTGTCAGGGCATGCTTTCTaGCCTGAGCCTCGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTTSLPLVSGKGPQGPGLSGHAF*PEPRPG Trigger: GCCTGGACGAGGCTCAGGCCAGAAAGCATGCCCTGA...CAGCCCAGGTCCCTGTGGCCCCTTGCCACTGACCAATGGAAGTGACGTGGTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| CDS-3UTR CCA 90 bp | GCAAGTGGCCTGAAAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCCACAGGGACCTGGGCTaGGTGTGGACTGGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASGLKKGKAAARTSEVISHRDLG*VWTGSC Trigger: GCAGCTGCCAGTCCACACCCAGCCCAGGTCCCTGTG...GCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTTTCAGGCCACTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR TCA 90 bp | GCAAGTGGCCTGAAAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCGACGCCGGGCCTTGGTaGCTGTGGATGCTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASGLKKGKAAARTSEVISDAGPW*LWMLSL Trigger: CAGGGAAAGCATCCACAGTCACCAAGGCCCGGCGTC...GCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTTTCAGGCCACTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR GCA 90 bp | CTGAGGTCATCAGCAGGACACAGGGCCAGTCACCTATGGCACTCAGCCAGGTGCAGCACGTCTGTGGCCTaGTTGCTGAAATTCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LRSSAGHRASHLWHSARCSTSVA*LLKFRR Trigger: GCGGCGGAATTTCAGCAAGCAGGCCACAGACGTGCT...GCACCTGGCTGAGTGCCATAGGTGACTGGCCCTGTGTCCTGCTGATGACCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081503.13 ENSMUST00000134777.10 |
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| CDS-3UTR GCA 90 bp | AAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCAGGACACAGGGCCTGTGGGGCGGCCCTCTaGCAGTTACTATGGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRAKPQPGLLRSSAGHRACGAAL*QLLWTR Trigger: CCTGGTCCATAGTAACTGGCAGAGGGCCGCCCCACA...GGCCCTGTGTCCTGCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR TCA 90 bp | CCTGGGACGCCGGGCCTTGGTGACTGTGGATGCTTTCCCTGTGTACATGGTGGCTCTCGCAGAGCACACTaGAGAGAGCAGACTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PGTPGLGDCGCFPCVHGGSRRAH*REQTSS Trigger: GGATGAAGTCTGCTCTCTTCAGTGTGCTCTGCGAGA...GCCACCATGTACACAGGGAAAGCATCCACAGTCACCAAGGCCCGGCGTCCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| CDS-3UTR GCA 90 bp | CTGAGGTCATCAGCAGGACACAGGGCCAGTCACCTATGGCACTCAGCCAGGTGCTGTGTTCCATCTCCCTaGAAGACACAGGCCTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: LRSSAGHRASHLWHSARCCVPSP*KTQASP Trigger: GGGTGAGGCCTGTGTCTTGCAGGGAGATGGAACACA...GCACCTGGCTGAGTGCCATAGGTGACTGGCCCTGTGTCCTGCTGATGACCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CCA 90 bp | GCAAGTGGCCTGAAAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCTCCAACCTCAGCAGCTaGGCATCGGGAGGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASGLKKGKAAARTSEVISSNLSS*ASGGSS Trigger: AGAGGACCCTCCCGATGCCCAGCTGCTGAGGTTGGA...GCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTTTCAGGCCACTTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CCA 90 bp | TCTGAGGTCATCAGCAGGACACAGGGCCAGTCACCTATGGCACTCAGCCAGGTGACTTCCATTGGTCAGTaGCAAGGGGCCACAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SEVISRTQGQSPMALSQVTSIGQ*QGATGT Trigger: GGTCCCTGTGGCCCCTTGCCACTGACCAATGGAAGT...CACCTGGCTGAGTGCCATAGGTGACTGGCCCTGTGTCCTGCTGATGACCTCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CCA 90 bp | GGACTTCTGAGGTCATCAGCAGGACACAGGGCCAGTCACCTATGGCACTCAGCCCCACGTCACTTCCATTaGTCAGTGGCAAGGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLLRSSAGHRASHLWHSAPRHFH*SVARGH Trigger: GTGGCCCCTTGCCACTGACCAATGGAAGTGACGTGG...GGCTGAGTGCCATAGGTGACTGGCCCTGTGTCCTGCTGATGACCTCAGAAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR GCA 90 bp | CTGAAAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCAGGACACAGTGCTGTGCTGCCTGCTaGTGCTCCTCGGCCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKKGKAAARTSEVISRTQCCAAC*CSSASL Trigger: AAGAGAGGCCGAGGAGCAGCAGCAGGCAGCACAGCA...CTGTGTCCTGCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTTTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR GCA 90 bp | CTGAAAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCAGGACACAGCACCTGGTGTTGCTGTaGTGCCTGCTGCTGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKKGKAAARTSEVISRTQHLVLL*CLLLLL Trigger: GAGGAGCAGCAGCAGGCAGCACAGCAACACCAGGTG...CTGTGTCCTGCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTTTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CCA 90 bp | AAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCAGGACACAGGGCCATTTGGACAGCCACCTaGTGTTGCTGTGCTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRAKPQPGLLRSSAGHRAIWTAT*CCCAAC Trigger: GCAGGCAGCACAGCAACACCAGGTGGCTGTCCAAAT...GGCCCTGTGTCCTGCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR TCA 90 bp | GCCAGGACTTCTGAGGTCATCAGCAGGACACAGGGCCAGTCACCTATGGCACTCTCTCGCAGAGCACACTaGAGAGAGCAGACTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ARTSEVISRTQGQSPMALSRRAH*REQTSS Trigger: GGATGAAGTCTGCTCTCTTCAGTGTGCTCTGCGAGA...GAGTGCCATAGGTGACTGGCCCTGTGTCCTGCTGATGACCTCAGAAGTCCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000081503.13 ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| CDS-3UTR GCA 90 bp | AGGACTTCTGAGGTCATCAGCAGGACACAGGGCCAGTCACCTATGGCACTCAGCATGGCCATGATCTGCTaGAGGACGTCGCTCGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTSEVISRTQGQSPMALSMAMIC*RTSLVS Trigger: TGACACGAGCGACGTCCTGCAGCAGATCATGGCCAT...GCTGAGTGCCATAGGTGACTGGCCCTGTGTCCTGCTGATGACCTCAGAAGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000081503.13 ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| CDS-3UTR GCA 90 bp | CTGAAAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCAGGACACAGGTGATGGCCATGATCTaGTGCAGGACGTCGCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKKGKAAARTSEVISRTQVMAMI*CRTSLV Trigger: CACGAGCGACGTCCTGCAGCAGATCATGGCCATCAC...CTGTGTCCTGCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTTTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000081503.13 ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| CDS-3UTR CCA 90 bp | GCCGCAGCCAGGACTTCTGAGGTCATCAGCAGGACACAGGGCCAGTCACCTATGGCAGACTTCATCCGATaGCAGTTCAGGGCATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AAARTSEVISRTQGQSPMADFIR*QFRACF Trigger: AAAGCATGCCCTGAACTGCCATCGGATGAAGTCTGC...CATAGGTGACTGGCCCTGTGTCCTGCTGATGACCTCAGAAGTCCTGGCTGCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000081503.13 ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| CDS-3UTR TCA 90 bp | ACGCCGGGCCTTGGTGACTGTGGATGCTTTCCCTGTGTACATGGTGGCTTCTTCTCTCGCAGAGCACACTaGAGAGAGCAGACTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TPGLGDCGCFPCVHGGFFSRRAH*REQTSS Trigger: GGATGAAGTCTGCTCTCTTCAGTGTGCTCTGCGAGA...GAAGAAGCCACCATGTACACAGGGAAAGCATCCACAGTCACCAAGGCCCGGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| CDS-3UTR TCA 90 bp | GGCCTGAAAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCAGGACACTTGGCCCTGTAGTCTaGGTGCTCAATGCTATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLKKGKAAARTSEVISRTLGPVV*VLNAIV Trigger: GACAATAGCATTGAGCACTCAGACTACAGGGCCAAG...TGTCCTGCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTTTCAGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CCA 90 bp | CTGAGGTCATCAGCAGGACACAGGGCCAGTCACCTATGGCACTCAGCCAGGTGCAATGCTATTGTCATTTaGACAGCCACCTGGTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRSSAGHRASHLWHSARCNAIVI*TATWCC Trigger: GCAACACCAGGTGGCTGTCCAAATGACAATAGCATT...GCACCTGGCTGAGTGCCATAGGTGACTGGCCCTGTGTCCTGCTGATGACCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CCA 90 bp | AAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCAGGACACAGGGCCGCACTGAACTTGCTCTaGATGGTGTTCACCATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRAKPQPGLLRSSAGHRAALNLL*MVFTMC Trigger: ACACATGGTGAACACCATCCAGAGCAAGTTCAGTGC...GGCCCTGTGTCCTGCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CCA 90 bp | CTGAAAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCAGGACACAGAACCAGTTAGAGACCTaGGACACTGTGATGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: LKKGKAAARTSEVISRTQNQLET*DTVMPP Trigger: GGGTGGCATCACAGTGTCCCAGGTCTCTAACTGGTT...CTGTGTCCTGCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR TCA 90 bp | CTGAGGTCATCAGCAGGACACAGGGCCAGTCACCTATGGCACTCAGCCAGGTGCATGGTGGCTTCTTCCTaGAACTTCCCTGTATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRSSAGHRASHLWHSARCMVASS*NFPVFF Trigger: AAAGAATACAGGGAAGTTTCAGGAAGAAGCCACCAT...GCACCTGGCTGAGTGCCATAGGTGACTGGCCCTGTGTCCTGCTGATGACCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CCA 90 bp | ACAGGTCAAAACTTTAATCGGGTGCTCAGAATGAACAGTCCACTGTCAGTCACTTCAGGGCATGCTTTCTaGCCTGAGCCTCGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGQNFNRVLRMNSPLSVTSGHAF*PEPRPG Trigger: GCCTGGACGAGGCTCAGGCCAGAAAGCATGCCCTGA...AGTGACTGACAGTGGACTGTTCATTCTGAGCACCCGATTAAAGTTTTGACCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000081503.13 ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| CDS-3UTR GCA 90 bp | TGTGGATGCTTTCCCTGTGTACATGGTGGCTTCTTCCTGAAACTTCCCTGTATTATGGCCATGATCTGCTaGAGGACGTCGCTCGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CGCFPCVHGGFFLKLPCIMAMIC*RTSLVS Trigger: TGACACGAGCGACGTCCTGCAGCAGATCATGGCCAT...AATACAGGGAAGTTTCAGGAAGAAGCCACCATGTACACAGGGAAAGCATCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| CDS-3UTR CCA 90 bp | TCGGGTGCTCAGAATGAACAGTCCACTGTCAGTCACTTAACTGATGTTTCTTTATCAGGGCATGCTTTCTaGCCTGAGCCTCGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGAQNEQSTVSHLTDVSLSGHAF*PEPRPG Trigger: GCCTGGACGAGGCTCAGGCCAGAAAGCATGCCCTGA...TAAAGAAACATCAGTTAAGTGACTGACAGTGGACTGTTCATTCTGAGCACCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000081503.13 ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| CDS-3UTR CCA 90 bp | ACAGGTCAAAACTTTAATCGGGTGCTCAGAATGAACAGTCCACTGTCAGTCACTCTCTCTTCTCTGGCCTaGACACACCCTCAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGQNFNRVLRMNSPLSVTLSSLA*THPQPA Trigger: TGCTGGCTGAGGGTGTGTCCAGGCCAGAGAAGAGAG...AGTGACTGACAGTGGACTGTTCATTCTGAGCACCCGATTAAAGTTTTGACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR TCA 90 bp | TCGGGTGCTCAGAATGAACAGTCCACTGTCAGTCACTTAACTGATGTTTCTTTAGGAGGGTCCTCTTCCTaGAACTGGATGCTCACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGAQNEQSTVSHLTDVSLGGSSS*NWMLTA Trigger: TGCCGTGAGCATCCAGTTTCAGGAAGAGGACCCTCC...TAAAGAAACATCAGTTAAGTGACTGACAGTGGACTGTTCATTCTGAGCACCCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR GCA 90 bp | TCGGGTGCTCAGAATGAACAGTCCACTGTCAGTCACTTAACTGATGTTTCTTTAATGGCCATGATCTGCTaGAGGACGTCGCTCGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGAQNEQSTVSHLTDVSLMAMIC*RTSLVS Trigger: TGACACGAGCGACGTCCTGCAGCAGATCATGGCCAT...TAAAGAAACATCAGTTAAGTGACTGACAGTGGACTGTTCATTCTGAGCACCCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000081503.13 ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| CDS-3UTR TCA 90 bp | TCGGGTGCTCAGAATGAACAGTCCACTGTCAGTCACTTAACTGATGTTTCTTTATCTCGCAGAGCACACTaGAGAGAGCAGACTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SGAQNEQSTVSHLTDVSLSRRAH*REQTSS Trigger: GGATGAAGTCTGCTCTCTTCAGTGTGCTCTGCGAGA...TAAAGAAACATCAGTTAAGTGACTGACAGTGGACTGTTCATTCTGAGCACCCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000081503.13 ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| CDS-3UTR GCA 90 bp | ACAGGTCAAAACTTTAATCGGGTGCTCAGAATGAACAGTCCACTGTCAGTCACTCTTGGTGACTGTGGATaGTTTCCCTGTGTACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGQNFNRVLRMNSPLSVTLGDCG*FPCVHG Trigger: ACCATGTACACAGGGAAAGCATCCACAGTCACCAAG...AGTGACTGACAGTGGACTGTTCATTCTGAGCACCCGATTAAAGTTTTGACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR GCA 90 bp | ACAGGTCAAAACTTTAATCGGGTGCTCAGAATGAACAGTCCACTGTCAGTCACTAGTCTGAGTGCTCAATaGTATTGTCATTTGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGQNFNRVLRMNSPLSVTSLSAQ*YCHLDS Trigger: GCTGTCCAAATGACAATAGCATTGAGCACTCAGACT...AGTGACTGACAGTGGACTGTTCATTCTGAGCACCCGATTAAAGTTTTGACCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CAA 90 bp | GGACTTCTGAGGTCATCAGCAGGACACAGGGCCAGTCACCTATGGCACTCAGCCGACAGCCACCTGGTGTaGCTGTGCTGCCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLLRSSAGHRASHLWHSADSHLV*LCCLLL Trigger: CAGCAGCAGGCAGCACAGCAACACCAGGTGGCTGTC...GGCTGAGTGCCATAGGTGACTGGCCCTGTGTCCTGCTGATGACCTCAGAAGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CAA 90 bp | GCAGCCAGGACTTCTGAGGTCATCAGCAGGACACAGGGCCAGTCACCTATGGCACTGAAATTCCGCCGCTaGCGCCTGGCATCCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AARTSEVISRTQGQSPMALKFRR*RLASRN Trigger: GTTCCTGGATGCCAGGCGCAAGCGGCGGAATTTCAG...TGCCATAGGTGACTGGCCCTGTGTCCTGCTGATGACCTCAGAAGTCCTGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CAA 90 bp | GGACTTCTGAGGTCATCAGCAGGACACAGGGCCAGTCACCTATGGCACTCAGCCACGTCTGTGGCCTGCTaGCTGAAATTCCGCCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLLRSSAGHRASHLWHSATSVAC*LKFRRL Trigger: CAAGCGGCGGAATTTCAGCAAGCAGGCCACAGACGT...GGCTGAGTGCCATAGGTGACTGGCCCTGTGTCCTGCTGATGACCTCAGAAGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081503.13 ENSMUST00000134777.10 |
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| CDS GCA 90 bp | AATGCTATTGTCATTTGGACAGCCACCTGGTGTTGCTGTGCTGCCTaGTGCTGCTCCTCGGCCTCTCTTCTCTGGCCTGGACACACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NAIVIWTATWCCCAA*CCSSASLLWPGHTL Trigger: GAGGGTGTGTCCAGGCCAGAGAAGAGAGGCCGAGGAGCAGCAGCAGGCAGCACAGCAACACCAGGTGGCTGTCCAAATGACAATAGCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS TCA 90 bp | ATGTTATCCAACCTCAGCAGCTGGGCATCGGGAGGGTCCTCTTCCTaGAACTGGATGCTCACGGCAGTCTTCCCCTTGATCTCGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MLSNLSSWASGGSSS*NWMLTAVFPLISQS Trigger: GCTCTGCGAGATCAAGGGGAAGACTGCCGTGAGCATCCAGTTTCAGGAAGAGGACCCTCCCGATGCCCAGCTGCTGAGGTTGGATAACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
||
| CDS GCA 90 bp | AGTGCTCAATGCTATTGTCATTTGGACAGCCACCTGGTGTTGCTGTaGTGCCTGCTGCTGCTCCTCGGCCTCTCTTCTCTGGCCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SAQCYCHLDSHLVLL*CLLLLLGLSSLAWT Trigger: TGTCCAGGCCAGAGAAGAGAGGCCGAGGAGCAGCAGCAGGCAGCACAGCAACACCAGGTGGCTGTCCAAATGACAATAGCATTGAGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
||
| CDS-3UTR CAA 90 bp | GCCAGGACTTCTGAGGTCATCAGCAGGACACAGGGCCAGTCACCTATGGCACTCTGTTCCCGGAGAAGGTaGGTGACATGTGTGGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ARTSEVISRTQGQSPMALCSRRR*VTCVVN Trigger: GTTCACCACACATGTCACCAACCTTCTCCGGGAACA...GAGTGCCATAGGTGACTGGCCCTGTGTCCTGCTGATGACCTCAGAAGTCCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
||
| CDS GCA 90 bp | TCTGTCGGATCTGGGACAGCTTGGCCCTGTAGTCTGAGTGCTCAATaGTATTGTCATTTGGACAGCCACCTGGTGTTGCTGTGCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVGSGTAWPCSLSAQ*YCHLDSHLVLLCCL Trigger: CAGGCAGCACAGCAACACCAGGTGGCTGTCCAAATGACAATAGCATTGAGCACTCAGACTACAGGGCCAAGCTGTCCCAGATCCGACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
||
| CDS-3UTR CAA 90 bp | AAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCAGGACACAGGGCCGAGTGCTCAATGCTATaGTCATTTGGACAGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: KRAKPQPGLLRSSAGHRAECSML*SFGQPP Trigger: AGGTGGCTGTCCAAATGACAATAGCATTGAGCACTC...GGCCCTGTGTCCTGCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
||
| CDS TCA 90 bp | AGAGTGGTAAATCTGTCGGATCTGGGACAGCTTGGCCCTGTAGTCTaGGTGCTCAATGCTATTGTCATTTGGACAGCCACCTGGTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RVVNLSDLGQLGPVV*VLNAIVIWTATWCC Trigger: GCAACACCAGGTGGCTGTCCAAATGACAATAGCATTGAGCACTCAGACTACAGGGCCAAGCTGTCCCAGATCCGACAGATTTACCACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CAA 90 bp | TCGGGTGCTCAGAATGAACAGTCCACTGTCAGTCACTTAACTGATGTTTCTTTACTGGGACGCCGGGCCTaGGTGACTGTGGATGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: SGAQNEQSTVSHLTDVSLLGRRA*VTVDAF Trigger: GAAAGCATCCACAGTCACCAAGGCCCGGCGTCCCAG...TAAAGAAACATCAGTTAAGTGACTGACAGTGGACTGTTCATTCTGAGCACCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CAA 90 bp | AAAAGGGCAAAGCCGCAGCCAGGACTTCTGAGGTCATCAGCAGGACACAGGGCCTTCCCTGTATTCTTTTaGTACCGGATTCTTTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: KRAKPQPGLLRSSAGHRAFPVFF*YRILLL Trigger: CAACAAAAGAATCCGGTACAAAAAGAATACAGGGAA...GGCCCTGTGTCCTGCTGATGACCTCAGAAGTCCTGGCTGCGGCTTTGCCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CAA 90 bp | TCGGGTGCTCAGAATGAACAGTCCACTGTCAGTCACTTAACTGATGTTTCTTTAACGTCTGTGGCCTGCTaGCTGAAATTCCGCCGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SGAQNEQSTVSHLTDVSLTSVAC*LKFRRL Trigger: CAAGCGGCGGAATTTCAGCAAGCAGGCCACAGACGT...TAAAGAAACATCAGTTAAGTGACTGACAGTGGACTGTTCATTCTGAGCACCCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081503.13 ENSMUST00000134777.10 |
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| CDS-3UTR CAA 90 bp | ACAGGTCAAAACTTTAATCGGGTGCTCAGAATGAACAGTCCACTGTCAGTCACTGATGCAGCATCCCAATaGAAGCTGCCAGACTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: TGQNFNRVLRMNSPLSVTDAASQ*KLPDSP Trigger: GGGAGAGTCTGGCAGCTTCAATTGGGATGCTGCATC...AGTGACTGACAGTGGACTGTTCATTCTGAGCACCCGATTAAAGTTTTGACCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS-3UTR CAA 90 bp | ACAGGTCAAAACTTTAATCGGGTGCTCAGAATGAACAGTCCACTGTCAGTCACTCAATGCTATTGTCATTaGGACAGCCACCTGGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: TGQNFNRVLRMNSPLSVTQCYCH*DSHLVL Trigger: CAACACCAGGTGGCTGTCCAAATGACAATAGCATTG...AGTGACTGACAGTGGACTGTTCATTCTGAGCACCCGATTAAAGTTTTGACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS CCA 72 bp | ATGGCCATGATCTGCTGCAGGACGTCGCTCGTGTCATaGCCTAGTGGAGCTGTGGTCGGCAGGCGGCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: MAMICCRTSLVS*PSGAVVGRRRG Trigger: CCCGCGCCGCCTGCCGACCACAGCTCCACTAGGCCATGACACGAGCGACGTCCTGCAGCAGATCATGGCCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000081503.13 ENSMUST00000131637.9 ENSMUST00000132899.8 ENSMUST00000134777.10 ENSMUST00000156319.8 |
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| CDS CCA 72 bp | CCGCAGAGTGAGAACCACGTCACTTCCATTGGTCAGTaGCAAGGGGCCACAGGGACCAGTCTTCCCCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: PQSENHVTSIGQ*QGATGTSLPLD Trigger: ATCAAGGGGAAGACTGGTCCCTGTGGCCCCTTGCCACTGACCAATGGAAGTGACGTGGTTCTCACTCTGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131637.9 |
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| CDS CAA 90 bp | GGGACAGCTTGGCCCTGTAGTCTGAGTGCTCAATGCTATTGTCATTaGGACAGCCACCTGGTGTTGCTGTGCTGCCTGCTGCTGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GTAWPCSLSAQCYCH*DSHLVLLCCLLLLL Trigger: GAGGAGCAGCAGCAGGCAGCACAGCAACACCAGGTGGCTGTCCAAATGACAATAGCATTGAGCACTCAGACTACAGGGCCAAGCTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS CAA 90 bp | CTTCCATTGGTCAGTGGCAAGGGGCCACAGGGACCAGTCTTCCCCTaGATCTCGCAGAGCACACTGAAGAGAGCAGACTTCATCCGATGG | + |
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Preference number: 6 (lower is better) Translates to: LPLVSGKGPQGPVFP*ISQSTLKRADFIRW Trigger: CCATCGGATGAAGTCTGCTCTCTTCAGTGTGCTCTGCGAGATCAAGGGGAAGACTGGTCCCTGTGGCCCCTTGCCACTGACCAATGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131637.9 |
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| CDS GCA 72 bp | TGCTATTGTCATTTGGACAGCCACCTGGTGTTGCTGTaGTGCCTGCTGCTGCTCCTCGGCCTCTCTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: CYCHLDSHLVLL*CLLLLLGLSSL Trigger: CAGAGAAGAGAGGCCGAGGAGCAGCAGCAGGCAGCACAGCAACACCAGGTGGCTGTCCAAATGACAATAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS GCA 72 bp | CTCAATGCTATTGTCATTTGGACAGCCACCTGGTGTTaGTGTGCTGCCTGCTGCTGCTCCTCGGCCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LNAIVIWTATWC*CAACCCSSASL Trigger: AAGAGAGGCCGAGGAGCAGCAGCAGGCAGCACAGCAACACCAGGTGGCTGTCCAAATGACAATAGCATTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS GCA 72 bp | TGCTCTGGATGGTGTTCACCATGTGTTCCATCTCCCTaGAAGACACAGGCCTCACCCTACTCTGTTCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: CSGWCSPCVPSP*KTQASPYSVPG Trigger: TCCGGGAACAGAGTAGGGTGAGGCCTGTGTCTTGCAGGGAGATGGAACACATGGTGAACACCATCCAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS CAA 72 bp | CTTGCTGAAATTCCGCCGCTTGCGCCAGTCTTCCCCTaGATCTCGCAGAGCACACTGAAGAGAGCAGACTTC | + |
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Preference number: 6 (lower is better) Translates to: LAEIPPLAPVFP*ISQSTLKRADF Trigger: GAAGTCTGCTCTCTTCAGTGTGCTCTGCGAGATCAAGGGGAAGACTGGCGCAAGCGGCGGAATTTCAGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134777.10 |
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| CDS CAA 72 bp | TGGCCCTGTAGTCTGAGTGCTCAATGCTATTGTCATTaGGACAGCCACCTGGTGTTGCTGTGCTGCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: WPCSLSAQCYCH*DSHLVLLCCLL Trigger: CAGCAGGCAGCACAGCAACACCAGGTGGCTGTCCAAATGACAATAGCATTGAGCACTCAGACTACAGGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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| CDS TCA 72 bp | AATCTGTCGGATCTGGGACAGCTTGGCCCTGTAGTCTaGGTGCTCAATGCTATTGTCATTTGGACAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: NLSDLGQLGPVV*VLNAIVIWTAT Trigger: GGTGGCTGTCCAAATGACAATAGCATTGAGCACTCAGACTACAGGGCCAAGCTGTCCCAGATCCGACAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081503.13 |
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