Pregenerated sensors for PBX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038718Ensembl transcript IDs: ENSMUST00000040638.15, ENSMUST00000113132.9, ENSMUST00000143776.8, ENSMUST00000153278.8, ENSMUST00000175855.3
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACGGAGGGTATCCACCAGAGTTTGGCGTGGTGGGTGAGTTGGTCTaGTTGTTCTGCACGGCTGCAGCCACTGCATGTGCGGCTGTCACG | + |
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Preference number: 1 (lower is better) Translates to: DGGYPPEFGVVGELV*LFCTAAATACAAVT Trigger: CGTGACAGCCGCACATGCAGTGGCTGCAGCCGTGCAGAACAACCAGACCAACTCACCCACCACGCCAAACTCTGGTGGATACCCTCCGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143776.8 |
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| 3UTR CCA 90 bp | AACATGACGGAGGGTATCCACCAGAGTTTGGCGTGGTGGGTGAGTTaGTCTGGTTGTTCTGCACGGCTGCAGCCACTGCATGTGCGGCTG | + |
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Preference number: 1 (lower is better) Translates to: NMTEGIHQSLAWWVS*SGCSARLQPLHVRL Trigger: CAGCCGCACATGCAGTGGCTGCAGCCGTGCAGAACAACCAGACCAACTCACCCACCACGCCAAACTCTGGTGGATACCCTCCGTCATGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143776.8 |
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| 3UTR CCA 90 bp | AAAGAACCAGAAGAACCAGAGTTTGGCGTGGTGGGTGAGTTGGTCTaGTTGTTCTGCACGGCTGCAGCCACTGCATGTGCGGCTGTCACG | + |
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Preference number: 1 (lower is better) Translates to: KEPEEPEFGVVGELV*LFCTAAATACAAVT Trigger: CGTGACAGCCGCACATGCAGTGGCTGCAGCCGTGCAGAACAACCAGACCAACTCACCCACCACGCCAAACTCTGGTTCTTCTGGTTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153278.8 |
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| 3UTR TCA 90 bp | ATGAAGAACATTCAAAACGCTTCTCAGTATTTACAACAGCTTGGATaGTCCTGTGTTAAGAGTCAGACCCAATGTTGCCAATCTTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: MKNIQNASQYLQQLG*SCVKSQTQCCQSWL Trigger: AAGCCAAGATTGGCAACATTGGGTCTGACTCTTAACACAGGATCATCCAAGCTGTTGTAAATACTGAGAAGCGTTTTGAATGTTCTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| 3UTR TCA 90 bp | AAACTACATATAACTACCACAAGGAAGACTTTTCAATCCAGGGTGTaGGCCAGTAGAAAGGAACACGGAACGCTTTTAATACATCAGAAT | + |
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Preference number: 1 (lower is better) Translates to: KLHITTTRKTFQSRV*ASRKEHGTLLIHQN Trigger: ATTCTGATGTATTAAAAGCGTTCCGTGTTCCTTTCTACTGGCTCACACCCTGGATTGAAAAGTCTTCCTTGTGGTAGTTATATGTAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
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| 3UTR CAA 90 bp | GGAGGGTATCCACCAGAGTTTGGCGTGGTGGGTGAGTTGGTCTGGTaGTTCTGCACGGCTGCAGCCACTGCATGTGCGGCTGTCACGGCT | + |
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Preference number: 2 (lower is better) Translates to: GGYPPEFGVVGELVW*FCTAAATACAAVTA Trigger: AGCCGTGACAGCCGCACATGCAGTGGCTGCAGCCGTGCAGAACAACCAGACCAACTCACCCACCACGCCAAACTCTGGTGGATACCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143776.8 |
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| 3UTR CAA 90 bp | GAACCAGAAGAACCAGAGTTTGGCGTGGTGGGTGAGTTGGTCTGGTaGTTCTGCACGGCTGCAGCCACTGCATGTGCGGCTGTCACGGCT | + |
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Preference number: 2 (lower is better) Translates to: EPEEPEFGVVGELVW*FCTAAATACAAVTA Trigger: AGCCGTGACAGCCGCACATGCAGTGGCTGCAGCCGTGCAGAACAACCAGACCAACTCACCCACCACGCCAAACTCTGGTTCTTCTGGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153278.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCGGGCCTTCCGTAGGAGAAGTCACAGAAGATGGAGTTGTTGCGTCCTGCTTAGAGGTATCCGAGTaGACACTGCCCGGGCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LPGPSVGEVTEDGVVASCLEVSE*TLPGPS Trigger: GGAAGGCCCGGGCAGTGTGCACTCGGATACCTCTAA...GCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACGGAAGGCCCGGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113132.9 ENSMUST00000143776.8 ENSMUST00000153278.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCGGGCCTTCCGTAGGAGAAGTCACAGAAGATGGAGTTGTTGCGTCCTGCCACCTGTGACTGCACATTaGCTCCGACTTGGGACCCTT | + |
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Preference number: 2 (lower is better) Translates to: ARAFRRRSHRRWSCCVLPPVTAH*LRLGTL Trigger: AAGGGTCCCAAGTCGGAGCCAATGTGCAGTCACAGG...TGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACGGAAGGCCCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153278.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGACTGTACAGTGAGTTTGCTCCAAGGCCGTCACTGTAGCCTCCCGTCTGATTTAGAGGTATCCGAGTaGACACTGCCCGGGCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: VDCTVSLLQGRHCSLPSDLEVSE*TLPGPS Trigger: GGAAGGCCCGGGCAGTGTGCACTCGGATACCTCTAA...ATCAGACGGGAGGCTACAGTGACGGCCTTGGAGCAAACTCACTGTACAGTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGTTAGAGGTATCCGAGTGCACACTGCCCGGGCCTTCCGTAGGAGAAGTCACGCGTGGTGGGTGAGTTaGTCTGGTTGTTCTGCACGG | + |
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Preference number: 2 (lower is better) Translates to: LVRGIRVHTARAFRRRSHAWWVS*SGCSAR Trigger: CCGTGCAGAACAACCAGACCAACTCACCCACCACGC...GTGACTTCTCCTACGGAAGGCCCGGGCAGTGTGCACTCGGATACCTCTAACTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
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| 3UTR CAA 90 bp | AGGTTAAAAGAACCAGAAGAACCAGAGTTTGGCGTGGTGGGTGAGTaGGTCTGGTTGTTCTGCACGGCTGCAGCCACTGCATGTGCGGCT | + |
|
Preference number: 2 (lower is better) Translates to: RLKEPEEPEFGVVGE*VWLFCTAAATACAA Trigger: AGCCGCACATGCAGTGGCTGCAGCCGTGCAGAACAACCAGACCAACTCACCCACCACGCCAAACTCTGGTTCTTCTGGTTCTTTTAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153278.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCGGGCCTTCCGTAGGAGAAGTCACAGAAGATGGAGTTGTTGCGTCCTGCTGGCAAGGGAAGTCCTaGAATGCCTTCCTTAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LPGPSVGEVTEDGVVASCWQGKS*NAFLKK Trigger: CTTCTTAAGGAAGGCATTTCAGGACTTCCCTTGCCA...GCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACGGAAGGCCCGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
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| 3UTR-3UTR GCA 90 bp | CACCTTGACAAGTCTGTGCAGCACCTAGCGCACACGGTCAAACCCCAGACAGGTACGATGATGAGAGCCTaGATGGAAATCCGCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: HLDKSVQHLAHTVKPQTGTMMRA*MEIRKG Trigger: ACCCTTGCGGATTTCCATGCAGGCTCTCATCATCGT...ACCTGTCTGGGGTTTGACCGTGTGCGCTAGGTGCTGCACAGACTTGTCAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGTTAGAGGTATCCGAGTGCACACTGCCCGGGCCTTCCGTAGGAGAAGTCACGGAGTTGTTGCGTCCTaGCAGCCTCCATTAGCGTTT | + |
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Preference number: 2 (lower is better) Translates to: LVRGIRVHTARAFRRRSHGVVAS*QPPLAF Trigger: AAACGCTAATGGAGGCTGGCAGGACGCAACAACTCC...GTGACTTCTCCTACGGAAGGCCCGGGCAGTGTGCACTCGGATACCTCTAACTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113132.9 ENSMUST00000143776.8 ENSMUST00000153278.8 |
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| 3UTR-3UTR GCA 90 bp | CACTGCATGTGCGGCTGTCACGGCTGTTTTTGCAGCATAGAGATTGGCCTCCTCGGAGTTGTTGCGTCCTaGCAGCCTCCATTAGCGTTT | + |
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Preference number: 2 (lower is better) Translates to: HCMCGCHGCFCSIEIGLLGVVAS*QPPLAF Trigger: AAACGCTAATGGAGGCTGGCAGGACGCAACAACTCC...GAGGAGGCCAATCTCTATGCTGCAAAAACAGCCGTGACAGCCGCACATGCAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
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| 3UTR-3UTR CCA 90 bp | GACGGAGGGTATCCACCTGTGACTGCACATTGGCTCCGACTTGGGACCCTTGGTAGAAGTCACAGAAGATaGAGTTGTTGCGTCCTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: DGGYPPVTAHWLRLGTLGRSHRR*SCCVLP Trigger: TGGCAGGACGCAACAACTCCATCTTCTGTGACTTCT...ACCAAGGGTCCCAAGTCGGAGCCAATGTGCAGTCACAGGTGGATACCCTCCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153278.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCGGGCCTTCCGTAGGAGAAGTCACAGAAGATGGAGTTGTTGCGTCCTGCTCTCTTTCGGGGAAATaGGACGCGTTCTACTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: LPGPSVGEVTEDGVVASCSLSGK*DAFYSV Trigger: AACAGAGTAGAACGCGTCCCATTTCCCCGAAAGAGA...GCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACGGAAGGCCCGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTGTTCTGCACGGCTGCAGCCACTGCATGTGCGGCTGTCACGGCTGTTTTTGTCTCTTTCGGGGAAATaGGACGCGTTCTACTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: GCSARLQPLHVRLSRLFLSLSGK*DAFYSV Trigger: AACAGAGTAGAACGCGTCCCATTTCCCCGAAAGAGA...CAAAAACAGCCGTGACAGCCGCACATGCAGTGGCTGCAGCCGTGCAGAACAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 ENSMUST00000175855.3 |
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| 3UTR-3UTR CCA 90 bp | CACGGCTGCAGCCACTGCATGTGCGGCTGTCACGGCTGTTTTTGCAGCATAGAGTACGCCTTTTCCGTCTaGCATCAAGGAACCTTGATC | + |
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Preference number: 2 (lower is better) Translates to: HGCSHCMCGCHGCFCSIEYAFSV*HQGTLI Trigger: GATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTA...CTCTATGCTGCAAAAACAGCCGTGACAGCCGCACATGCAGTGGCTGCAGCCGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 ENSMUST00000175855.3 |
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| 3UTR-3UTR TCA 90 bp | GGTTGTTCTGCACGGCTGCAGCCACTGCATGTGCGGCTGTCACGGCTGTTTTTGATACCTGTGATACTGTaGTGCTGCATTTCTTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: GCSARLQPLHVRLSRLFLIPVIL*CCISWP Trigger: TGGCCAAGAAATGCAGCATCACAGTATCACAGGTAT...CAAAAACAGCCGTGACAGCCGCACATGCAGTGGCTGCAGCCGTGCAGAACAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 ENSMUST00000175855.3 |
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| 3UTR-3UTR GCA 90 bp | GACAAGTCTGTGCAGCACCTAGCGCACACGGTCAAACCCCAGACAGGTCTTGTTACGATGATGAGAGCCTaGATGGAAATCCGCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: DKSVQHLAHTVKPQTGLVTMMRA*MEIRKG Trigger: ACCCTTGCGGATTTCCATGCAGGCTCTCATCATCGT...AACAAGACCTGTCTGGGGTTTGACCGTGTGCGCTAGGTGCTGCACAGACTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| 3UTR-3UTR CCA 90 bp | ACACTGCCCGGGCCTTCCGTAGGAGAAGTCACAGAAGATGGAGTTGTTGCGTCCTACGCCTTTTCCGTCTaGCATCAAGGAACCTTGATC | + |
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Preference number: 2 (lower is better) Translates to: TLPGPSVGEVTEDGVVASYAFSV*HQGTLI Trigger: GATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTA...GGACGCAACAACTCCATCTTCTGTGACTTCTCCTACGGAAGGCCCGGGCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCGGGCCTTCCGTAGGAGAAGTCACAGAAGATGGAGTTGTTGCGTCCTGCCAGGCATCAAGGAACCTTaGTCTCAAAATCATAACTGC | + |
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Preference number: 2 (lower is better) Translates to: ARAFRRRSHRRWSCCVLPGIKEP*SQNHNC Trigger: GCAGTTATGATTTTGAGATCAAGGTTCCTTGATGCC...TGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACGGAAGGCCCGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTGTTCTGCACGGCTGCAGCCACTGCATGTGCGGCTGTCACGGCTGTTTTTGGGCATCAAGGAACCTTaGTCTCAAAATCATAACTGC | + |
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Preference number: 2 (lower is better) Translates to: GCSARLQPLHVRLSRLFLGIKEP*SQNHNC Trigger: GCAGTTATGATTTTGAGATCAAGGTTCCTTGATGCC...CAAAAACAGCCGTGACAGCCGCACATGCAGTGGCTGCAGCCGTGCAGAACAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 ENSMUST00000175855.3 |
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| 3UTR-3UTR GCA 90 bp | ACAGGCAGACATCGCCTTCCCTCCAAGCCCATCCGTGATATGAGAACGATGATGAGAAGATGGAGTTGTTaGGTCCTGCCAGCCTCCATT | + |
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Preference number: 2 (lower is better) Translates to: TGRHRLPSKPIRDMRTMMRRWSC*VLPASI Trigger: AATGGAGGCTGGCAGGACGCAACAACTCCATCTTCT...CATCATCGTTCTCATATCACGGATGGGCTTGGAGGGAAGGCGATGTCTGCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
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| 3UTR-3UTR GCA 90 bp | TGCTCCAAGGCCGTCACTGTAGCCTCCCGTCTGATTGATAACATGACGGAGGGTTGTCACGGCTGTTTTTaGAGCATAGAGATTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: CSKAVTVASRLIDNMTEGCHGCF*SIEIGL Trigger: GAGGCCAATCTCTATGCTGCAAAAACAGCCGTGACA...ACCCTCCGTCATGTTATCAATCAGACGGGAGGCTACAGTGACGGCCTTGGAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
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| 3UTR-3UTR CCA 90 bp | TGCAGCCACTGCATGTGCGGCTGTCACGGCTGTTTTTGCAGCATAGAGATTGGCTCTCTTTCGGGGAAATaGGACGCGTTCTACTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: CSHCMCGCHGCFCSIEIGSLSGK*DAFYSV Trigger: AACAGAGTAGAACGCGTCCCATTTCCCCGAAAGAGA...GCCAATCTCTATGCTGCAAAAACAGCCGTGACAGCCGCACATGCAGTGGCTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 ENSMUST00000175855.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCGGGCCTTCCGTAGGAGAAGTCACAGAAGATGGAGTTGTTGCGTCCTGCCATGTCCCCAGAATTTaGGAGGTTAAAAGAACCAGA | + |
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Preference number: 2 (lower is better) Translates to: LPGPSVGEVTEDGVVASCHVPRI*EVKRTR Trigger: TCTGGTTCTTTTAACCTCCCAAATTCTGGGGACATG...GCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACGGAAGGCCCGGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153278.8 |
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| 3UTR-3UTR TCA 90 bp | CACTGCATGTGCGGCTGTCACGGCTGTTTTTGCAGCATAGAGATTGGCCTCCTCATACCTGTGATACTGTaGTGCTGCATTTCTTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: HCMCGCHGCFCSIEIGLLIPVIL*CCISWP Trigger: TGGCCAAGAAATGCAGCATCACAGTATCACAGGTAT...GAGGAGGCCAATCTCTATGCTGCAAAAACAGCCGTGACAGCCGCACATGCAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 ENSMUST00000175855.3 |
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| 3UTR-3UTR TCA 90 bp | GACAAGTCTGTGCAGCACCTAGCGCACACGGTCAAACCCCAGACAGGTCTTGTTGAGGCCACCAGTCTTTaGCCTAATTACAACATAAGA | + |
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Preference number: 2 (lower is better) Translates to: DKSVQHLAHTVKPQTGLVEATSL*PNYNIR Trigger: TCTTATGTTGTAATTAGGTCAAAGACTGGTGGCCTC...AACAAGACCTGTCTGGGGTTTGACCGTGTGCGCTAGGTGCTGCACAGACTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| 3UTR-3UTR GCA 90 bp | AGCTTGGATGATCCTGTGTTAAGAGTCAGACCCAATGTTGCCAATCTTGGCTTTTTAGAGGTATCCGAGTaGACACTGCCCGGGCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: SLDDPVLRVRPNVANLGFLEVSE*TLPGPS Trigger: GGAAGGCCCGGGCAGTGTGCACTCGGATACCTCTAA...AAAGCCAAGATTGGCAACATTGGGTCTGACTCTTAACACAGGATCATCCAAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
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| 3UTR-3UTR TCA 90 bp | TACATCAGAATCACCGCCACAAATTATTGTCACGACCCAGTCAGTTTCAGAATCAGGAAGAGCACACCTTaGCAAGTCTGTGCAGCACCT | + |
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Preference number: 2 (lower is better) Translates to: YIRITATNYCHDPVSFRIRKSTP*QVCAAP Trigger: AGGTGCTGCACAGACTTGTCAAGGTGTGCTCTTCCT...GATTCTGAAACTGACTGGGTCGTGACAATAATTTGTGGCGGTGATTCTGATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGGGAGGTTAAAAGAACCAGAAGAACCAGAGTTTGGCGTGGTGGGTGAGTTGATACCTGTGATACTGTaGTGCTGCATTTCTTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: FGRLKEPEEPEFGVVGELIPVIL*CCISWP Trigger: TGGCCAAGAAATGCAGCATCACAGTATCACAGGTAT...CAACTCACCCACCACGCCAAACTCTGGTTCTTCTGGTTCTTTTAACCTCCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153278.8 |
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| 3UTR-3UTR GCA 90 bp | TACATCAGAATCACCGCCACAAATTATTGTCACGACCCAGTCAGTTTCAGAATCGGAGTTGTTGCGTCCTaGCAGCCTCCATTAGCGTTT | + |
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Preference number: 2 (lower is better) Translates to: YIRITATNYCHDPVSFRIGVVAS*QPPLAF Trigger: AAACGCTAATGGAGGCTGGCAGGACGCAACAACTCC...GATTCTGAAACTGACTGGGTCGTGACAATAATTTGTGGCGGTGATTCTGATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
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| 3UTR-3UTR TCA 90 bp | AGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGTTGGCAAGGGAAGTCCTaGAATGCCTTCCTTAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: RPNVANLGFLRVANATLSWQGKS*NAFLKK Trigger: CTTCTTAAGGAAGGCATTTCAGGACTTCCCTTGCCA...ACTCAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGGATGATCCTGTGTTAAGAGTCAGACCCAATGTTGCCAATCTTGGCTTTAGAAGTCACAGAAGATaGAGTTGTTGCGTCCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: SLDDPVLRVRPNVANLGFRSHRR*SCCVLP Trigger: TGGCAGGACGCAACAACTCCATCTTCTGTGACTTCT...AAAGCCAAGATTGGCAACATTGGGTCTGACTCTTAACACAGGATCATCCAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGGATACCTGTGATACTGTGATGCTGCATTTCTTGGCCAGCTCCTCTTTGGAACTAAATTTCCGATaGATGATGCCCACCATCCTT | + |
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Preference number: 2 (lower is better) Translates to: QLDTCDTVMLHFLASSSLELNFR*MMPTIL Trigger: AAGGATGGTGGGCATCATCCATCGGAAATTTAGTTC...CAAAGAGGAGCTGGCCAAGAAATGCAGCATCACAGTATCACAGGTATCCAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 ENSMUST00000175855.3 |
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| 3UTR-3UTR TCA 90 bp | GTCAGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGTTACAACAGCTTGGATaGTCCTGTGTTAAGAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: VRPNVANLGFLRVANATLLQQLG*SCVKSQ Trigger: CTGACTCTTAACACAGGATCATCCAAGCTGTTGTAA...CAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| 3UTR-3UTR CCA 90 bp | GTCAGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAACAATGTTACATCTTaGCCTAATTGGATAAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: VRPNVANLGFLRVANATLNNVTS*PNWIKC Trigger: GCACTTTATCCAATTAGGCCAAGATGTAACATTGTT...CAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGGATGATCCTGTGTTAAGAGTCAGACCCAATGTTGCCAATCTTGGCTTTTTACAACATAAGAGATaGCAACACAAACATGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: SLDDPVLRVRPNVANLGFLQHKR*QHKHGK Trigger: CTTGCCATGTTTGTGTTGCCATCTCTTATGTTGTAA...AAAGCCAAGATTGGCAACATTGGGTCTGACTCTTAACACAGGATCATCCAAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| 3UTR CAA 90 bp | GAACACGGAACGCTTTTAATACATCAGAATCACCGCCACAAATTATaGTCACGACCCAGTCAGTTTCAGAATCGCATACAATACAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: EHGTLLIHQNHRHKL*SRPSQFQNRIQYKK Trigger: CTTTTTGTATTGTATGCGATTCTGAAACTGACTGGGTCGTGACAATAATTTGTGGCGGTGATTCTGATGTATTAAAAGCGTTCCGTGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGGAACACGGAACGCTTTTAATACATCAGAATCACCGCCACAAATTATTGTCTTACAACATAAGAGATaGCAACACAAACATGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: KGTRNAFNTSESPPQIIVLQHKR*QHKHGK Trigger: CTTGCCATGTTTGTGTTGCCATCTCTTATGTTGTAA...GACAATAATTTGTGGCGGTGATTCTGATGTATTAAAAGCGTTCCGTGTTCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
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| 3UTR-3UTR CAA 90 bp | GTTAGAGGTATCCGAGTGCACACTGCCCGGGCCTTCCGTAGGAGAAGTCACAGAGGCGTGGTGGGTGAGTaGGTCTGGTTGTTCTGCACG | + |
|
Preference number: 3 (lower is better) Translates to: VRGIRVHTARAFRRRSHRGVVGE*VWLFCT Trigger: CGTGCAGAACAACCAGACCAACTCACCCACCACGCC...TCTGTGACTTCTCCTACGGAAGGCCCGGGCAGTGTGCACTCGGATACCTCTAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCCGGGCCTTCCGTAGGAGAAGTCACAGAAGATGGAGTTGTTGCGTCCTGCCATCACAGAAGATGGAGTaGTTGCGTCCTGCCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: ARAFRRRSHRRWSCCVLPSQKME*LRPASL Trigger: GAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGA...TGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACGGAAGGCCCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113132.9 ENSMUST00000143776.8 ENSMUST00000153278.8 |
||
| 3UTR CCA 72 bp | TATCCACCAGAGTTTGGCGTGGTGGGTGAGTTGGTCTaGTTGTTCTGCACGGCTGCAGCCACTGCATGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: YPPEFGVVGELV*LFCTAAATACA Trigger: CGCACATGCAGTGGCTGCAGCCGTGCAGAACAACCAGACCAACTCACCCACCACGCCAAACTCTGGTGGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143776.8 |
||
| 3UTR CCA 72 bp | GAGGGTATCCACCAGAGTTTGGCGTGGTGGGTGAGTTaGTCTGGTTGTTCTGCACGGCTGCAGCCACTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: EGIHQSLAWWVS*SGCSARLQPLH Trigger: ATGCAGTGGCTGCAGCCGTGCAGAACAACCAGACCAACTCACCCACCACGCCAAACTCTGGTGGATACCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143776.8 |
||
| 3UTR CCA 72 bp | GAAGAACCAGAGTTTGGCGTGGTGGGTGAGTTGGTCTaGTTGTTCTGCACGGCTGCAGCCACTGCATGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: EEPEFGVVGELV*LFCTAAATACA Trigger: CGCACATGCAGTGGCTGCAGCCGTGCAGAACAACCAGACCAACTCACCCACCACGCCAAACTCTGGTTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153278.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGCCACTGCATGTGCGGCTGTCACGGCTGTTTTTGCAGCATAGAGATTGGCCAGAAGATGGAGTTGTaGCGTCCTGCCAGCCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: CSHCMCGCHGCFCSIEIGQKMEL*RPASLH Trigger: ATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTG...GCCAATCTCTATGCTGCAAAAACAGCCGTGACAGCCGCACATGCAGTGGCTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
||
| 3UTR-3UTR CAA 90 bp | GACAAGTCTGTGCAGCACCTAGCGCACACGGTCAAACCCCAGACAGGTCTTGTTTCACAGAAGATGGAGTaGTTGCGTCCTGCCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DKSVQHLAHTVKPQTGLVSQKME*LRPASL Trigger: GAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGA...AACAAGACCTGTCTGGGGTTTGACCGTGTGCGCTAGGTGCTGCACAGACTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
||
| 3UTR GCA 72 bp | GGTCTGGTTGTTCTGCACGGCTGCAGCCACTGCATGTaGGGCTGTCACGGCTGTTTTTGCAGCATAGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: GLVVLHGCSHCM*GCHGCFCSIEI Trigger: AATCTCTATGCTGCAAAAACAGCCGTGACAGCCGCACATGCAGTGGCTGCAGCCGTGCAGAACAACCAGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 ENSMUST00000175855.3 |
||
| 3UTR CCA 72 bp | AACCAGAAGAACCAGAGTTTGGCGTGGTGGGTGAGTTaGTCTGGTTGTTCTGCACGGCTGCAGCCACTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: NQKNQSLAWWVS*SGCSARLQPLH Trigger: ATGCAGTGGCTGCAGCCGTGCAGAACAACCAGACCAACTCACCCACCACGCCAAACTCTGGTTCTTCTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153278.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACTGCCCGGGCCTTCCGTAGGAGAAGTCACAGAAGATGGAGTTGTTGCGTCCCTGTCACGGCTGTTTTaGCAGCATAGAGATTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TLPGPSVGEVTEDGVVASLSRLF*QHRDWP Trigger: AGGCCAATCTCTATGCTGCAAAAACAGCCGTGACAG...GGACGCAACAACTCCATCTTCTGTGACTTCTCCTACGGAAGGCCCGGGCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
||
| 3UTR CCA 72 bp | TGGATCCATGGTCTCATTAGCGCAGACTCCAGGCTCTaGTACTTCAGAGGGAGAAAGGAGGCCACCAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: WIHGLISADSRL*YFRGRKEATSL Trigger: AAGACTGGTGGCCTCCTTTCTCCCTCTGAAGTACCAGAGCCTGGAGTCTGCGCTAATGAGACCATGGATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGGAAGAGCACACCTaGACAAGTCTGTGCAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: SQTQCCQSWLFKGCKCNPEEEHT*TSLCST Trigger: GGTGCTGCACAGACTTGTCAAGGTGTGCTCTTCCTC...AGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| 3UTR-3UTR CAA 90 bp | GATAACATGACGGAGGGTATCCACCAGAGTTTGGCGTGGTGGGTGAGTTGGTCTTTGCCGATGTTCTTCTaGTACCTGATTCGTTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: DNMTEGIHQSLAWWVSWSLPMFF*YLIRLL Trigger: CAACAAACGAATCAGGTACAAGAAGAACATCGGCAA...AGACCAACTCACCCACCACGCCAAACTCTGGTGGATACCCTCCGTCATGTTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143776.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGTTTTCAGAAGATGGAGTTGTaGCGTCCTGCCAGCCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PNVANLGFLRVANATLSFQKMEL*RPASLH Trigger: ATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTG...AAAACTCAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
||
| 3UTR TCA 72 bp | TGGTACTTCAGAGGGAGAAAGGAGGCCACCAGTCTTTaGCCTAATTACAACATAAGAGATGGCAACACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: WYFRGRKEATSL*PNYNIRDGNTN Trigger: GTTTGTGTTGCCATCTCTTATGTTGTAATTAGGTCAAAGACTGGTGGCCTCCTTTCTCCCTCTGAAGTACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| 3UTR CCA 72 bp | TCCTGTGTTAAGAGTCAGACCCAATGTTGCCAATCTTaGCTTTTTAAGGGTTGCAAATGCAACCCTGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SCVKSQTQCCQS*LFKGCKCNPEF Trigger: AAACTCAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCTGACTCTTAACACAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTGGATGATCCTGTGTTAAGAGTCAGACCCAATGTTGCCAATCTTGGCTTTCATGTTGGGATTCTATaGGTTTGTATGAGTTCGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SLDDPVLRVRPNVANLGFHVGIL*VCMSSH Trigger: ATGCGAACTCATACAAACCAATAGAATCCCAACATG...AAAGCCAAGATTGGCAACATTGGGTCTGACTCTTAACACAGGATCATCCAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| 3UTR TCA 72 bp | ATTCAAAACGCTTCTCAGTATTTACAACAGCTTGGATaGTCCTGTGTTAAGAGTCAGACCCAATGTTGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: IQNASQYLQQLG*SCVKSQTQCCQ Trigger: TTGGCAACATTGGGTCTGACTCTTAACACAGGATCATCCAAGCTGTTGTAAATACTGAGAAGCGTTTTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAAACGCTTCTCAGTATTTACAACAGCTTGGATGATCCTGTGTTAAGAGTCCATGTTGGGATTCTATaGGTTTGTATGAGTTCGCAT | + |
|
Preference number: 3 (lower is better) Translates to: FKTLLSIYNSLDDPVLRVHVGIL*VCMSSH Trigger: ATGCGAACTCATACAAACCAATAGAATCCCAACATG...GACTCTTAACACAGGATCATCCAAGCTGTTGTAAATACTGAGAAGCGTTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | GCCCGGGCCTTCCGTAGGAGAAGTCACAGAAGATGGAGTTGTTGCGTCCTGCCATGCCGCGGCTGCAGCTaGTGCCGCCGATCCCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ARAFRRRSHRRWSCCVLPCRGCS*CRRSPT Trigger: GGTGGGGGATCGGCGGCAGCAGCTGCAGCCGCGGCA...TGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACGGAAGGCCCGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | GTTAGAGGTATCCGAGTGCACACTGCCCGGGCCTTCCGTAGGAGAAGTCACAGAAGAGGCTGCCGCGGCTaGAGCTGCTGCCGCCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: VRGIRVHTARAFRRRSHRRGCRG*SCCRRS Trigger: GGATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCT...TCTGTGACTTCTCCTACGGAAGGCCCGGGCAGTGTGCACTCGGATACCTCTAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | GGTTGTTCTGCACGGCTGCAGCCACTGCATGTGCGGCTGTCACGGCTGTTTTTGCGATGTCCTGCTTCCTaGCGTCGCCGTCCGCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GCSARLQPLHVRLSRLFLRCPAS*RRRPPL Trigger: AAGGGGCGGACGGCGACGGCAGGAAGCAGGACATCG...CAAAAACAGCCGTGACAGCCGCACATGCAGTGGCTGCAGCCGTGCAGAACAACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
||
| 3UTR CAA 72 bp | CCACCAGAGTTTGGCGTGGTGGGTGAGTTGGTCTGGTaGTTCTGCACGGCTGCAGCCACTGCATGTGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPEFGVVGELVW*FCTAAATACAA Trigger: AGCCGCACATGCAGTGGCTGCAGCCGTGCAGAACAACCAGACCAACTCACCCACCACGCCAAACTCTGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143776.8 |
||
| 3UTR CAA 72 bp | GGAGGGTATCCACCAGAGTTTGGCGTGGTGGGTGAGTaGGTCTGGTTGTTCTGCACGGCTGCAGCCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGYPPEFGVVGE*VWLFCTAAATA Trigger: TGCAGTGGCTGCAGCCGTGCAGAACAACCAGACCAACTCACCCACCACGCCAAACTCTGGTGGATACCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143776.8 |
||
| 3UTR CAA 72 bp | GAACCAGAGTTTGGCGTGGTGGGTGAGTTGGTCTGGTaGTTCTGCACGGCTGCAGCCACTGCATGTGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EPEFGVVGELVW*FCTAAATACAA Trigger: AGCCGCACATGCAGTGGCTGCAGCCGTGCAGAACAACCAGACCAACTCACCCACCACGCCAAACTCTGGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153278.8 |
||
| CDS-3UTR GCA 90 bp | TCGATCTCTTTCGGGGAAATGGGACGCGTTCTACTCTGTTCTCGGAGAAGGTTCCGATGTCCTGCTTCCTaGCGTCGCCGTCCGCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SISFGEMGRVLLCSRRRFRCPAS*RRRPPL Trigger: AAGGGGCGGACGGCGACGGCAGGAAGCAGGACATCG...GAACCTTCTCCGAGAACAGAGTAGAACGCGTCCCATTTCCCCGAAAGAGATCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGTGCCGCGGCTGCAGCTaGTGCCGCCGATCCCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VRPNVANLGFLRVANATLCRGCS*CRRSPT Trigger: GGTGGGGGATCGGCGGCAGCAGCTGCAGCCGCGGCA...CAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | CCCGGGCCTTCCGTAGGAGAAGTCACAGAAGATGGAGTTGTTGCGTCCTGCCAGTTGGTCTGGTTGTTCTaGACGGCTGCAGCCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGPSVGEVTEDGVVASCQLVWLF*TAAATA Trigger: TGCAGTGGCTGCAGCCGTGCAGAACAACCAGACCAA...CTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACGGAAGGCCCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
||
| CDS-3UTR CCA 90 bp | GTTAGAGGTATCCGAGTGCACACTGCCCGGGCCTTCCGTAGGAGAAGTCACAGAGCGTGGTGGGTGAGTTaGTCTGGTTGTTCTGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: VRGIRVHTARAFRRRSHRAWWVS*SGCSAR Trigger: CCGTGCAGAACAACCAGACCAACTCACCCACCACGC...TCTGTGACTTCTCCTACGGAAGGCCCGGGCAGTGTGCACTCGGATACCTCTAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
||
| 3UTR CAA 72 bp | GAACCAGAAGAACCAGAGTTTGGCGTGGTGGGTGAGTaGGTCTGGTTGTTCTGCACGGCTGCAGCCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EPEEPEFGVVGE*VWLFCTAAATA Trigger: TGCAGTGGCTGCAGCCGTGCAGAACAACCAGACCAACTCACCCACCACGCCAAACTCTGGTTCTTCTGGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153278.8 |
||
| CDS-3UTR TCA 90 bp | CACCTTGACAAGTCTGTGCAGCACCTAGCGCACACGGTCAAACCCCAGACAGGTATGTGGACTGTACAGTaGGTTTGCTCCAAGGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: HLDKSVQHLAHTVKPQTGMWTVQ*VCSKAV Trigger: GACGGCCTTGGAGCAAACTCACTGTACAGTCCACAT...ACCTGTCTGGGGTTTGACCGTGTGCGCTAGGTGCTGCACAGACTTGTCAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040638.15 |
||
| CDS-3UTR GCA 90 bp | CTGCCCGGGCCTTCCGTAGGAGAAGTCACAGAAGATGGAGTTGTTGCGTCCTGCCAGAGCATGTTTCTTTaGTTGCGCCTCGTCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGPSVGEVTEDGVVASCQSMFL*LRLVQA Trigger: AGCTTGGACGAGGCGCAAGCAAAGAAACATGCTCTG...GCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACGGAAGGCCCGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113132.9 ENSMUST00000143776.8 ENSMUST00000153278.8 |
||
| CDS-3UTR GCA 90 bp | AGCTTGGATGATCCTGTGTTAAGAGTCAGACCCAATGTTGCCAATCTTGGCTTTAGAGGCTGCCGCGGCTaGAGCTGCTGCCGCCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SLDDPVLRVRPNVANLGFRGCRG*SCCRRS Trigger: GGATCGGCGGCAGCAGCTGCAGCCGCGGCAGCCTCT...AAAGCCAAGATTGGCAACATTGGGTCTGACTCTTAACACAGGATCATCCAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | CACCTTGACAAGTCTGTGCAGCACCTAGCGCACACGGTCAAACCCCAGACAGGTGGAGTTGTTGCGTCCTaGCAGCCTCCATTAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HLDKSVQHLAHTVKPQTGGVVAS*QPPLAF Trigger: AAACGCTAATGGAGGCTGGCAGGACGCAACAACTCC...ACCTGTCTGGGGTTTGACCGTGTGCGCTAGGTGCTGCACAGACTTGTCAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040638.15 |
||
| CDS-3UTR TCA 90 bp | CTGCCCGGGCCTTCCGTAGGAGAAGTCACAGAAGATGGAGTTGTTGCGTCCTGCGCCGGTTTCATTCTGTaGCAGTTCAGAGCATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPGPSVGEVTEDGVVASCAGFIL*QFRACF Trigger: GAAACATGCTCTGAACTGTCACAGAATGAAACCGGC...GCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACGGAAGGCCCGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113132.9 ENSMUST00000143776.8 ENSMUST00000153278.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCTTCCTTAAGAAGACAGGCAGACATCGCCTTCCCTCCAAGCCCATCCGTGATGGTCATGATCTGGTaGAGGATGTCGCCGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MPSLRRQADIAFPPSPSVMVMIW*RMSPMS Trigger: GGACATCGGCGACATCCTCCACCAGATCATGACCAT...CACGGATGGGCTTGGAGGGAAGGCGATGTCTGCCTGTCTTCTTAAGGAAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR CCA 90 bp | GATGATGCCCACCATCCTTTCGATCTCTTTCGGGGAAATGGGACGCGTTCTACTTCCAGTCTCATTAGCTaGGGGTCGGGAGGGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DDAHHPFDLFRGNGTRSTSSLIS*GSGGSS Trigger: GGAAGACCCTCCCGACCCCCAGCTAATGAGACTGGA...AGTAGAACGCGTCCCATTTCCCCGAAAGAGATCGAAAGGATGGTGGGCATCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175855.3 |
||
| CDS-3UTR CCA 90 bp | GACAAGTCTGTGCAGCACCTAGCGCACACGGTCAAACCCCAGACAGGTCTTGTTCAGAGTTTGGCGTGGTaGGTGAGTTGGTCTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DKSVQHLAHTVKPQTGLVQSLAW*VSWSGC Trigger: ACAACCAGACCAACTCACCCACCACGCCAAACTCTG...AACAAGACCTGTCTGGGGTTTGACCGTGTGCGCTAGGTGCTGCACAGACTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR TCA 90 bp | GTTAGAGGTATCCGAGTGCACACTGCCCGGGCCTTCCGTAGGAGAAGTCACAGAGCCGGTTTCATTCTGTaGCAGTTCAGAGCATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VRGIRVHTARAFRRRSHRAGFIL*QFRACF Trigger: GAAACATGCTCTGAACTGTCACAGAATGAAACCGGC...TCTGTGACTTCTCCTACGGAAGGCCCGGGCAGTGTGCACTCGGATACCTCTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113132.9 ENSMUST00000143776.8 ENSMUST00000153278.8 |
||
| CDS-3UTR TCA 90 bp | GCCCACCATCCTTTCGATCTCTTTCGGGGAAATGGGACGCGTTCTACTCTGTTCGCCTTTCTCAGGACCTaGAACCCCTTCTGCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHHPFDLFRGNGTRSTLFAFLRT*NPFCQK Trigger: CTTTTGGCAGAAGGGGTTTCAGGTCCTGAGAAAGGC...GAACAGAGTAGAACGCGTCCCATTTCCCCGAAAGAGATCGAAAGGATGGTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175855.3 |
||
| CDS-3UTR GCA 90 bp | AGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGTCGATGTCCTGCTTCCTaGCGTCGCCGTCCGCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPNVANLGFLRVANATLSRCPAS*RRRPPL Trigger: AAGGGGCGGACGGCGACGGCAGGAAGCAGGACATCG...ACTCAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | CCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGTTTTCGCGGCTGCAGCTGCTaGCGCCGATCCCCCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PNVANLGFLRVANATLSFRGCSC*RRSPTF Trigger: AAAGGTGGGGGATCGGCGGCAGCAGCTGCAGCCGCG...AAAACTCAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | TGTCACGACCCAGTCAGTTTCAGAATCGCATACAATACAAAAAGAGAAGGAGAGCGCGGCTGCAGCTGCTaGCGCCGATCCCCCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CHDPVSFRIAYNTKREGERGCSC*RRSPTF Trigger: AAAGGTGGGGGATCGGCGGCAGCAGCTGCAGCCGCG...CTCTCCTTCTCTTTTTGTATTGTATGCGATTCTGAAACTGACTGGGTCGTGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGCAGACATCGCCTTCCCTCCAAGCCCATCCGTGATATGAGAACGATGATGATGGTCATGATCTGGTaGAGGATGTCGCCGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGRHRLPSKPIRDMRTMMMVMIW*RMSPMS Trigger: GGACATCGGCGACATCCTCCACCAGATCATGACCAT...CATCATCGTTCTCATATCACGGATGGGCTTGGAGGGAAGGCGATGTCTGCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR CCA 90 bp | GTTAGAGGTATCCGAGTGCACACTGCCCGGGCCTTCCGTAGGAGAAGTCACAGATCTCTTTCGGGGAAATaGGACGCGTTCTACTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VRGIRVHTARAFRRRSHRSLSGK*DAFYSV Trigger: AACAGAGTAGAACGCGTCCCATTTCCCCGAAAGAGA...TCTGTGACTTCTCCTACGGAAGGCCCGGGCAGTGTGCACTCGGATACCTCTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
||
| CDS-3UTR TCA 90 bp | GTTAGAGGTATCCGAGTGCACACTGCCCGGGCCTTCCGTAGGAGAAGTCACAGATTCAATAGAGTTATCTaGAGAACCTCCAGAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRGIRVHTARAFRRRSHRFNRVI*RTSRGC Trigger: GCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAA...TCTGTGACTTCTCCTACGGAAGGCCCGGGCAGTGTGCACTCGGATACCTCTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGCAGACATCGCCTTCCCTCCAAGCCCATCCGTGATATGAGAACGATGATGCACACGTGCTTTGCTTaGGCTGCATCTGAATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TGRHRLPSKPIRDMRTMMHTCFA*AASEWN Trigger: GTTCCATTCAGATGCAGCTCAAGCAAAGCACGTGTG...CATCATCGTTCTCATATCACGGATGGGCTTGGAGGGAAGGCGATGTCTGCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | AGTCAGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTATGTCGCCGATGTCCTaGTTCCTGCCGTCGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQTQCCQSWLFKGCKCNPMSPMS*FLPSPS Trigger: GGACGGCGACGGCAGGAAGCAGGACATCGGCGACAT...AGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCTGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR CCA 90 bp | GATGATGCCCACCATCCTTTCGATCTCTTTCGGGGAAATGGGACGCGTTCTACTATGGTCATGATCTGGTaGAGGATGTCGCCGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DDAHHPFDLFRGNGTRSTMVMIW*RMSPMS Trigger: GGACATCGGCGACATCCTCCACCAGATCATGACCAT...AGTAGAACGCGTCCCATTTCCCCGAAAGAGATCGAAAGGATGGTGGGCATCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
||
| CDS-3UTR TCA 90 bp | CACCTTGACAAGTCTGTGCAGCACCTAGCGCACACGGTCAAACCCCAGACAGGTGGCATCAAGGAACCTTaGTCTCAAAATCATAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLDKSVQHLAHTVKPQTGGIKEP*SQNHNC Trigger: GCAGTTATGATTTTGAGATCAAGGTTCCTTGATGCC...ACCTGTCTGGGGTTTGACCGTGTGCGCTAGGTGCTGCACAGACTTGTCAAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR CCA 90 bp | GGAGTTGTTGCGTCCTGCCAGCCTCCATTAGCGTTTAAGTTATGTGGACTGTACATGGTCATGATCTGGTaGAGGATGTCGCCGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVVASCQPPLAFKLCGLYMVMIW*RMSPMS Trigger: GGACATCGGCGACATCCTCCACCAGATCATGACCAT...GTACAGTCCACATAACTTAAACGCTAATGGAGGCTGGCAGGACGCAACAACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113132.9 ENSMUST00000143776.8 ENSMUST00000153278.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGCAGACATCGCCTTCCCTCCAAGCCCATCCGTGATATGAGAACGATGATGTCTCTTTCGGGGAAATaGGACGCGTTCTACTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGRHRLPSKPIRDMRTMMSLSGK*DAFYSV Trigger: AACAGAGTAGAACGCGTCCCATTTCCCCGAAAGAGA...CATCATCGTTCTCATATCACGGATGGGCTTGGAGGGAAGGCGATGTCTGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR TCA 90 bp | ATGCCTTCCTTAAGAAGACAGGCAGACATCGCCTTCCCTCCAAGCCCATCCGTGTGTGATAGATTTGTCTaGTCTGGGTCAATTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MPSLRRQADIAFPPSPSVCDRFV*SGSIWL Trigger: GAGCCAAATTGACCCAGATCAGACAAATCTATCACA...CACGGATGGGCTTGGAGGGAAGGCGATGTCTGCCTGTCTTCTTAAGGAAGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR TCA 90 bp | GACAAGTCTGTGCAGCACCTAGCGCACACGGTCAAACCCCAGACAGGTCTTGTTGGCATCAAGGAACCTTaGTCTCAAAATCATAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: DKSVQHLAHTVKPQTGLVGIKEP*SQNHNC Trigger: GCAGTTATGATTTTGAGATCAAGGTTCCTTGATGCC...AACAAGACCTGTCTGGGGTTTGACCGTGTGCGCTAGGTGCTGCACAGACTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR TCA 90 bp | GCGCTTATCAAGGCATGTCAGCTGGGAAAGCGCCGGGGATTAGTTAGAGGTATCATACCTGTGATACTGTaGTGCTGCATTTCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALIKACQLGKRRGLVRGIIPVIL*CCISWP Trigger: TGGCCAAGAAATGCAGCATCACAGTATCACAGGTAT...GATACCTCTAACTAATCCCCGGCGCTTTCCCAGCTGACATGCCTTGATAAGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | TTCAAAACGCTTCTCAGTATTTACAACAGCTTGGATGATCCTGTGTTAAGAGTCCGATGTCCTGCTTCCTaGCGTCGCCGTCCGCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FKTLLSIYNSLDDPVLRVRCPAS*RRRPPL Trigger: AAGGGGCGGACGGCGACGGCAGGAAGCAGGACATCG...GACTCTTAACACAGGATCATCCAAGCTGTTGTAAATACTGAGAAGCGTTTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | GGTTACAAACGCTTTCCTTCTCCTAGTGCTCCAAATGCGCTTATCAAGGCATGTTTGGTCTGGTTGTTCTaGACGGCTGCAGCCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GYKRFPSPSAPNALIKACLVWLF*TAAATA Trigger: TGCAGTGGCTGCAGCCGTGCAGAACAACCAGACCAA...ACATGCCTTGATAAGCGCATTTGGAGCACTAGGAGAAGGAAAGCGTTTGTAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | AGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGTTTAGAGGTATCCGAGTaGACACTGCCCGGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPNVANLGFLRVANATLSLEVSE*TLPGPS Trigger: GGAAGGCCCGGGCAGTGTGCACTCGGATACCTCTAA...ACTCAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040638.15 |
||
| CDS-3UTR CCA 90 bp | GTCAGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGGTGGGTGAGTTGGTCTaGTTGTTCTGCACGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VRPNVANLGFLRVANATLVGELV*LFCTAA Trigger: TGCAGCCGTGCAGAACAACCAGACCAACTCACCCAC...CAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR CCA 90 bp | AGCTTGGATGATCCTGTGTTAAGAGTCAGACCCAATGTTGCCAATCTTGGCTTTGCGTGGTGGGTGAGTTaGTCTGGTTGTTCTGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SLDDPVLRVRPNVANLGFAWWVS*SGCSAR Trigger: CCGTGCAGAACAACCAGACCAACTCACCCACCACGC...AAAGCCAAGATTGGCAACATTGGGTCTGACTCTTAACACAGGATCATCCAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTGGATACCTGTGATACTGTGATGCTGCATTTCTTGGCCAGCTCCTCTTTGCAGAGCATGTTTCTTTaGTTGCGCCTCGTCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLDTCDTVMLHFLASSSLQSMFL*LRLVQA Trigger: AGCTTGGACGAGGCGCAAGCAAAGAAACATGCTCTG...CAAAGAGGAGCTGGCCAAGAAATGCAGCATCACAGTATCACAGGTATCCAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
||
| CDS-3UTR GCA 90 bp | CCCGGGCCTTCCGTAGGAGAAGTCACAGAAGATGGAGTTGTTGCGTCCTGCCAGTGTGAATTCATTACATaGCTGTTCATATTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGPSVGEVTEDGVVASCQCEFIT*LFIFLQ Trigger: CTGGAGAAATATGAACAGGCATGTAATGAATTCACA...CTGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACGGAAGGCCCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
||
| CDS-3UTR CCA 90 bp | CCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGTTTTTCCAGTCTCATTAGCTaGGGGTCGGGAGGGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PNVANLGFLRVANATLSFSSLIS*GSGGSS Trigger: GGAAGACCCTCCCGACCCCCAGCTAATGAGACTGGA...AAAACTCAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR CCA 90 bp | TACATCAGAATCACCGCCACAAATTATTGTCACGACCCAGTCAGTTTCAGAATCTCCAGTCTCATTAGCTaGGGGTCGGGAGGGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YIRITATNYCHDPVSFRISSLIS*GSGGSS Trigger: GGAAGACCCTCCCGACCCCCAGCTAATGAGACTGGA...GATTCTGAAACTGACTGGGTCGTGACAATAATTTGTGGCGGTGATTCTGATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTGAAATGTACAGTGCTGAATACTGAATCTGAACGCATCACAAGAACCCGCCAGAGTTTGGCGTGGTaGGTGAGTTGGTCTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVKCTVLNTESERITRTRQSLAW*VSWSGC Trigger: ACAACCAGACCAACTCACCCACCACGCCAAACTCTG...GCGGGTTCTTGTGATGCGTTCAGATTCAGTATTCAGCACTGTACATTTCACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
||
| CDS-3UTR TCA 90 bp | GTCAGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGACCTTTCTCAGGACCTaGAACCCCTTCTGCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRPNVANLGFLRVANATLTFLRT*NPFCQK Trigger: CTTTTGGCAGAAGGGGTTTCAGGTCCTGAGAAAGGT...CAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR CCA 90 bp | TTACAACATAAGAGATGGCAACACAAACATGGCAAGGGAAGTCCTGAAATGCCTCCTGTGACTGCACATTaGCTCCGACTTGGGACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQHKRWQHKHGKGSPEMPPVTAH*LRLGTL Trigger: AAGGGTCCCAAGTCGGAGCCAATGTGCAGTCACAGG...AGGCATTTCAGGACTTCCCTTGCCATGTTTGTGTTGCCATCTCTTATGTTGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040638.15 |
||
| CDS-3UTR GCA 90 bp | CCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGTTTTGTATCCACCTGTGACTaGACATTGGCTCCGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PNVANLGFLRVANATLSFVSTCD*TLAPTW Trigger: CCAAGTCGGAGCCAATGTGCAGTCACAGGTGGATAC...AAAACTCAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040638.15 |
||
| CDS-3UTR CCA 90 bp | TTCAAAACGCTTCTCAGTATTTACAACAGCTTGGATGATCCTGTGTTAAGAGTCGGAGGGTCTTCCTCCTaGGCTCCTCTGATGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FKTLLSIYNSLDDPVLRVGGSSS*APLMLR Trigger: TCTCAGCATCAGAGGAGCCCAGGAGGAAGACCCTCC...GACTCTTAACACAGGATCATCCAAGCTGTTGTAAATACTGAGAAGCGTTTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR CCA 90 bp | GGTTACAAACGCTTTCCTTCTCCTAGTGCTCCAAATGCGCTTATCAAGGCATGTTACGCCTTTTCCGTCTaGCATCAAGGAACCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GYKRFPSPSAPNALIKACYAFSV*HQGTLI Trigger: GATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTA...ACATGCCTTGATAAGCGCATTTGGAGCACTAGGAGAAGGAAAGCGTTTGTAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR CCA 90 bp | GGTTACAAACGCTTTCCTTCTCCTAGTGCTCCAAATGCGCTTATCAAGGCATGTAGAAGTCACAGAAGATaGAGTTGTTGCGTCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GYKRFPSPSAPNALIKACRSHRR*SCCVLP Trigger: TGGCAGGACGCAACAACTCCATCTTCTGTGACTTCT...ACATGCCTTGATAAGCGCATTTGGAGCACTAGGAGAAGGAAAGCGTTTGTAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040638.15 |
||
| CDS-3UTR TCA 90 bp | AGCTTGGATGATCCTGTGTTAAGAGTCAGACCCAATGTTGCCAATCTTGGCTTTGCCGGTTTCATTCTGTaGCAGTTCAGAGCATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLDDPVLRVRPNVANLGFAGFIL*QFRACF Trigger: GAAACATGCTCTGAACTGTCACAGAATGAAACCGGC...AAAGCCAAGATTGGCAACATTGGGTCTGACTCTTAACACAGGATCATCCAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR TCA 90 bp | CCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGTTTTCACACGTGCTTTGCTTaGGCTGCATCTGAATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PNVANLGFLRVANATLSFHTCFA*AASEWN Trigger: GTTCCATTCAGATGCAGCTCAAGCAAAGCACGTGTG...AAAACTCAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | AGTTCTCTAAGAAGACAGGGTTACAGTAAAGCTGTAGGTGGTGGGTTACAAACGTGTCACGGCTGTTTTTaGAGCATAGAGATTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLRRQGYSKAVGGGLQTCHGCF*SIEIGL Trigger: GAGGCCAATCTCTATGCTGCAAAAACAGCCGTGACA...CGTTTGTAACCCACCACCTACAGCTTTACTGTAACCCTGTCTTCTTAGAGAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | TTACAACATAAGAGATGGCAACACAAACATGGCAAGGGAAGTCCTGAAATGCCTAGAAGATGGAGTTGTTaGGTCCTGCCAGCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LQHKRWQHKHGKGSPEMPRRWSC*VLPASI Trigger: AATGGAGGCTGGCAGGACGCAACAACTCCATCTTCT...AGGCATTTCAGGACTTCCCTTGCCATGTTTGTGTTGCCATCTCTTATGTTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040638.15 |
||
| CDS-3UTR CCA 90 bp | TTCAAAACGCTTCTCAGTATTTACAACAGCTTGGATGATCCTGTGTTAAGAGTCGTGGGTGAGTTGGTCTaGTTGTTCTGCACGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FKTLLSIYNSLDDPVLRVVGELV*LFCTAA Trigger: TGCAGCCGTGCAGAACAACCAGACCAACTCACCCAC...GACTCTTAACACAGGATCATCCAAGCTGTTGTAAATACTGAGAAGCGTTTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR TCA 90 bp | AGCTTGGATGATCCTGTGTTAAGAGTCAGACCCAATGTTGCCAATCTTGGCTTTTTCAATAGAGTTATCTaGAGAACCTCCAGAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLDDPVLRVRPNVANLGFFNRVI*RTSRGC Trigger: GCAGCCTCTGGAGGTTCTTCAGATAACTCTATTGAA...AAAGCCAAGATTGGCAACATTGGGTCTGACTCTTAACACAGGATCATCCAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR TCA 90 bp | AGTCAGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTATACCTGTGATACTGTaGTGCTGCATTTCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQTQCCQSWLFKGCKCNPIPVIL*CCISWP Trigger: TGGCCAAGAAATGCAGCATCACAGTATCACAGGTAT...AGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR CCA 90 bp | GTTACAAACGCTTTCCTTCTCCTAGTGCTCCAAATGCGCTTATCAAGGCATGTCCATGTCCCCAGAATTTaGGAGGTTAAAAGAACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTNAFLLLVLQMRLSRHVHVPRI*EVKRTR Trigger: TCTGGTTCTTTTAACCTCCCAAATTCTGGGGACATG...GACATGCCTTGATAAGCGCATTTGGAGCACTAGGAGAAGGAAAGCGTTTGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040638.15 |
||
| CDS-3UTR TCA 90 bp | CCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGTTTTGACTCTGCATGTTCATaGACATGTCCCCAGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: PNVANLGFLRVANATLSFDSACS*TCPQNL Trigger: CAAATTCTGGGGACATGTTCATGAACATGCAGAGTC...AAAACTCAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040638.15 |
||
| CDS-3UTR GCA 90 bp | TTCAAAACGCTTCTCAGTATTTACAACAGCTTGGATGATCCTGTGTTAAGAGTCCAGAGCATGTTTCTTTaGTTGCGCCTCGTCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FKTLLSIYNSLDDPVLRVQSMFL*LRLVQA Trigger: AGCTTGGACGAGGCGCAAGCAAAGAAACATGCTCTG...GACTCTTAACACAGGATCATCCAAGCTGTTGTAAATACTGAGAAGCGTTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | CCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGTTTTTCCCCATTCAGACTCTaGATGTTCATGAACATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PNVANLGFLRVANATLSFSPFRL*MFMNMS Trigger: GGACATGTTCATGAACATGCAGAGTCTGAATGGGGA...AAAACTCAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000040638.15 |
||
| CDS-3UTR TCA 90 bp | TTCAAAACGCTTCTCAGTATTTACAACAGCTTGGATGATCCTGTGTTAAGAGTCGCCGGTTTCATTCTGTaGCAGTTCAGAGCATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FKTLLSIYNSLDDPVLRVAGFIL*QFRACF Trigger: GAAACATGCTCTGAACTGTCACAGAATGAAACCGGC...GACTCTTAACACAGGATCATCCAAGCTGTTGTAAATACTGAGAAGCGTTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | TCATGTTTGAAACTACATATAACTACCACAAGGAAGACTTTTCAATCCAGGGTGCAGAGCATGTTTCTTTaGTTGCGCCTCGTCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCLKLHITTTRKTFQSRVQSMFL*LRLVQA Trigger: AGCTTGGACGAGGCGCAAGCAAAGAAACATGCTCTG...CACCCTGGATTGAAAAGTCTTCCTTGTGGTAGTTATATGTAGTTTCAAACATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | TTCAAAACGCTTCTCAGTATTTACAACAGCTTGGATGATCCTGTGTTAAGAGTCTGTCACGGCTGTTTTTaGAGCATAGAGATTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FKTLLSIYNSLDDPVLRVCHGCF*SIEIGL Trigger: GAGGCCAATCTCTATGCTGCAAAAACAGCCGTGACA...GACTCTTAACACAGGATCATCCAAGCTGTTGTAAATACTGAGAAGCGTTTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR TCA 90 bp | AGTTCTCTAAGAAGACAGGGTTACAGTAAAGCTGTAGGTGGTGGGTTACAAACGTTTGGCTCTGTAATCTaGGTGTTCAATAGAGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: SSLRRQGYSKAVGGGLQTFGSVI*VFNRVI Trigger: GATAACTCTATTGAACACTCAGATTACAGAGCCAAA...CGTTTGTAACCCACCACCTACAGCTTTACTGTAACCCTGTCTTCTTAGAGAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR CCA 90 bp | TCATGTTTGAAACTACATATAACTACCACAAGGAAGACTTTTCAATCCAGGGTGTACGCCTTTTCCGTCTaGCATCAAGGAACCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SCLKLHITTTRKTFQSRVYAFSV*HQGTLI Trigger: GATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTA...CACCCTGGATTGAAAAGTCTTCCTTGTGGTAGTTATATGTAGTTTCAAACATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
||
| CDS-3UTR GCA 90 bp | AGTTCTCTAAGAAGACAGGGTTACAGTAAAGCTGTAGGTGGTGGGTTACAAACGTGTGAATTCATTACATaGCTGTTCATATTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSLRRQGYSKAVGGGLQTCEFIT*LFIFLQ Trigger: CTGGAGAAATATGAACAGGCATGTAATGAATTCACA...CGTTTGTAACCCACCACCTACAGCTTTACTGTAACCCTGTCTTCTTAGAGAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| CDS-3UTR CCA 90 bp | TTCAAAACGCTTCTCAGTATTTACAACAGCTTGGATGATCCTGTGTTAAGAGTCGAACTAAATTTCCGATaGATGATGCCCACCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FKTLLSIYNSLDDPVLRVELNFR*MMPTIL Trigger: AAGGATGGTGGGCATCATCCATCGGAAATTTAGTTC...GACTCTTAACACAGGATCATCCAAGCTGTTGTAAATACTGAGAAGCGTTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
||
| 3UTR CAA 72 bp | ACGCTTTTAATACATCAGAATCACCGCCACAAATTATaGTCACGACCCAGTCAGTTTCAGAATCGCATACAA | + |
|
Preference number: 4 (lower is better) Translates to: TLLIHQNHRHKL*SRPSQFQNRIQ Trigger: TTGTATGCGATTCTGAAACTGACTGGGTCGTGACAATAATTTGTGGCGGTGATTCTGATGTATTAAAAGCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
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| CDS-3UTR CCA 90 bp | TCATGTTTGAAACTACATATAACTACCACAAGGAAGACTTTTCAATCCAGGGTGGAACTAAATTTCCGATaGATGATGCCCACCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: SCLKLHITTTRKTFQSRVELNFR*MMPTIL Trigger: AAGGATGGTGGGCATCATCCATCGGAAATTTAGTTC...CACCCTGGATTGAAAAGTCTTCCTTGTGGTAGTTATATGTAGTTTCAAACATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
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| CDS-3UTR TCA 90 bp | AAAGGAACACGGAACGCTTTTAATACATCAGAATCACCGCCACAAATTATTGTCTTTGGCTCTGTAATCTaGGTGTTCAATAGAGTTATC | + |
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Preference number: 4 (lower is better) Translates to: KGTRNAFNTSESPPQIIVFGSVI*VFNRVI Trigger: GATAACTCTATTGAACACTCAGATTACAGAGCCAAA...GACAATAATTTGTGGCGGTGATTCTGATGTATTAAAAGCGTTCCGTGTTCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
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| CDS-3UTR TCA 90 bp | AATTATTGTCACGACCCAGTCAGTTTCAGAATCGCATACAATACAAAAAGAGAATGTGATAGATTTGTCTaGTCTGGGTCAATTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: NYCHDPVSFRIAYNTKRECDRFV*SGSIWL Trigger: GAGCCAAATTGACCCAGATCAGACAAATCTATCACA...TTCTCTTTTTGTATTGTATGCGATTCTGAAACTGACTGGGTCGTGACAATAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
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| CDS-3UTR CAA 90 bp | CACCTTGACAAGTCTGTGCAGCACCTAGCGCACACGGTCAAACCCCAGACAGGTGGCGTGGTGGGTGAGTaGGTCTGGTTGTTCTGCACG | + |
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Preference number: 5 (lower is better) Translates to: HLDKSVQHLAHTVKPQTGGVVGE*VWLFCT Trigger: CGTGCAGAACAACCAGACCAACTCACCCACCACGCC...ACCTGTCTGGGGTTTGACCGTGTGCGCTAGGTGCTGCACAGACTTGTCAAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| CDS-3UTR CAA 90 bp | GCCCGGGCCTTCCGTAGGAGAAGTCACAGAAGATGGAGTTGTTGCGTCCTGCCAAGCATGTTTCTTTGCTaGCGCCTCGTCCAAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: ARAFRRRSHRRWSCCVLPSMFLC*RLVQAL Trigger: CAGAGCTTGGACGAGGCGCAAGCAAAGAAACATGCT...TGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACGGAAGGCCCGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113132.9 ENSMUST00000143776.8 ENSMUST00000153278.8 |
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| CDS-3UTR CAA 90 bp | GACAAGTCTGTGCAGCACCTAGCGCACACGGTCAAACCCCAGACAGGTCTTGTTACCTGTGACTGCACATaGGCTCCGACTTGGGACCCT | + |
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Preference number: 5 (lower is better) Translates to: DKSVQHLAHTVKPQTGLVTCDCT*APTWDP Trigger: AGGGTCCCAAGTCGGAGCCAATGTGCAGTCACAGGT...AACAAGACCTGTCTGGGGTTTGACCGTGTGCGCTAGGTGCTGCACAGACTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040638.15 |
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| CDS-3UTR CAA 90 bp | ACAGGCAGACATCGCCTTCCCTCCAAGCCCATCCGTGATATGAGAACGATGATGTCAGAGCATGTTTCTTaGCTTGCGCCTCGTCCAAGC | + |
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Preference number: 5 (lower is better) Translates to: TGRHRLPSKPIRDMRTMMSEHVS*LAPRPS Trigger: GCTTGGACGAGGCGCAAGCAAAGAAACATGCTCTGA...CATCATCGTTCTCATATCACGGATGGGCTTGGAGGGAAGGCGATGTCTGCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| CDS-3UTR CAA 90 bp | GCCCGGGCCTTCCGTAGGAGAAGTCACAGAAGATGGAGTTGTTGCGTCCTGCCATCTGCCAAAAGCATATaGTCCAGTCTCATTAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: ARAFRRRSHRRWSCCVLPSAKSI*SSLISW Trigger: CCAGCTAATGAGACTGGACAATATGCTTTTGGCAGA...TGGCAGGACGCAACAACTCCATCTTCTGTGACTTCTCCTACGGAAGGCCCGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
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| CDS-3UTR CAA 90 bp | CGATCTCTTTCGGGGAAATGGGACGCGTTCTACTCTGTTCTCGGAGAAGGTTCAAGCATGTTTCTTTGCTaGCGCCTCGTCCAAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: RSLSGKWDAFYSVLGEGSSMFLC*RLVQAL Trigger: CAGAGCTTGGACGAGGCGCAAGCAAAGAAACATGCT...TGAACCTTCTCCGAGAACAGAGTAGAACGCGTCCCATTTCCCCGAAAGAGATCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
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| CDS-3UTR CAA 90 bp | AGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGTGGCGTGGTGGGTGAGTaGGTCTGGTTGTTCTGCACG | + |
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Preference number: 5 (lower is better) Translates to: RPNVANLGFLRVANATLSGVVGE*VWLFCT Trigger: CGTGCAGAACAACCAGACCAACTCACCCACCACGCC...ACTCAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| CDS-3UTR CAA 90 bp | CACTGCATGTGCGGCTGTCACGGCTGTTTTTGCAGCATAGAGATTGGCCTCCTCATGCCTGTTTTCTCTTaGATCTCACACAAGACGCTG | + |
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Preference number: 5 (lower is better) Translates to: HCMCGCHGCFCSIEIGLLMPVFS*ISHKTL Trigger: CAGCGTCTTGTGTGAGATCAAAGAGAAAACAGGCAT...GAGGAGGCCAATCTCTATGCTGCAAAAACAGCCGTGACAGCCGCACATGCAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
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| CDS-3UTR CAA 90 bp | ATGCCTTCCTTAAGAAGACAGGCAGACATCGCCTTCCCTCCAAGCCCATCCGTGTTGCCGATGTTCTTCTaGTACCTGATTCGTTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: MPSLRRQADIAFPPSPSVLPMFF*YLIRLL Trigger: CAACAAACGAATCAGGTACAAGAAGAACATCGGCAA...CACGGATGGGCTTGGAGGGAAGGCGATGTCTGCCTGTCTTCTTAAGGAAGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| CDS-3UTR CAA 90 bp | GCTCCAAATGCGCTTATCAAGGCATGTCAGCTGGGAAAGCGCCGGGGATTAGTTGAGATTGGCCTCCTCTaGAAATTTGCCGATGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: APNALIKACQLGKRRGLVEIGLL*KFADVL Trigger: AAGAACATCGGCAAATTTCAAGAGGAGGCCAATCTC...AACTAATCCCCGGCGCTTTCCCAGCTGACATGCCTTGATAAGCGCATTTGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
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| CDS-3UTR CAA 90 bp | GGTTACAAACGCTTTCCTTCTCCTAGTGCTCCAAATGCGCTTATCAAGGCATGTTCACAGAAGATGGAGTaGTTGCGTCCTGCCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: GYKRFPSPSAPNALIKACSQKME*LRPASL Trigger: GAGGCTGGCAGGACGCAACAACTCCATCTTCTGTGA...ACATGCCTTGATAAGCGCATTTGGAGCACTAGGAGAAGGAAAGCGTTTGTAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040638.15 |
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| CDS-3UTR CAA 90 bp | GTCAGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGCATGTTTCTTTGCTaGCGCCTCGTCCAAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: VRPNVANLGFLRVANATLSMFLC*RLVQAL Trigger: CAGAGCTTGGACGAGGCGCAAGCAAAGAAACATGCT...CAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| CDS-3UTR CAA 90 bp | CGATCTCTTTCGGGGAAATGGGACGCGTTCTACTCTGTTCTCGGAGAAGGTTCATCTGCCAAAAGCATATaGTCCAGTCTCATTAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: RSLSGKWDAFYSVLGEGSSAKSI*SSLISW Trigger: CCAGCTAATGAGACTGGACAATATGCTTTTGGCAGA...TGAACCTTCTCCGAGAACAGAGTAGAACGCGTCCCATTTCCCCGAAAGAGATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175855.3 |
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| CDS-3UTR CAA 90 bp | AGTCAGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTCAGAAGATGGAGTTGTaGCGTCCTGCCAGCCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: SQTQCCQSWLFKGCKCNPQKMEL*RPASLH Trigger: ATGGAGGCTGGCAGGACGCAACAACTCCATCTTCTG...AGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040638.15 |
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| CDS-3UTR CAA 90 bp | CGATCTCTTTCGGGGAAATGGGACGCGTTCTACTCTGTTCTCGGAGAAGGTTCAATGCCTGTTTTCTCTTaGATCTCACACAAGACGCTG | + |
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Preference number: 5 (lower is better) Translates to: RSLSGKWDAFYSVLGEGSMPVFS*ISHKTL Trigger: CAGCGTCTTGTGTGAGATCAAAGAGAAAACAGGCAT...TGAACCTTCTCCGAGAACAGAGTAGAACGCGTCCCATTTCCCCGAAAGAGATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143776.8 ENSMUST00000153278.8 |
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| CDS-3UTR CAA 90 bp | GTGAAATGTACAGTGCTGAATACTGAATCTGAACGCATCACAAGAACCCGCCTTAGCATGTTTCTTTGCTaGCGCCTCGTCCAAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: VKCTVLNTESERITRTRLSMFLC*RLVQAL Trigger: CAGAGCTTGGACGAGGCGCAAGCAAAGAAACATGCT...AAGGCGGGTTCTTGTGATGCGTTCAGATTCAGTATTCAGCACTGTACATTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113132.9 |
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| CDS-3UTR CAA 90 bp | AGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGTCTGTCACGGCTGTTTTaGCAGCATAGAGATTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: RPNVANLGFLRVANATLSLSRLF*QHRDWP Trigger: AGGCCAATCTCTATGCTGCAAAAACAGCCGTGACAG...ACTCAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| CDS-3UTR CAA 90 bp | AGCTTGGATGATCCTGTGTTAAGAGTCAGACCCAATGTTGCCAATCTTGGCTTTCTGTCACGGCTGTTTTaGCAGCATAGAGATTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: SLDDPVLRVRPNVANLGFLSRLF*QHRDWP Trigger: AGGCCAATCTCTATGCTGCAAAAACAGCCGTGACAG...AAAGCCAAGATTGGCAACATTGGGTCTGACTCTTAACACAGGATCATCCAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| CDS-3UTR CAA 90 bp | CCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGTTTTGACTGTACAGTGAGTTaGCTCCAAGGCCGTCACTGT | + |
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Preference number: 5 (lower is better) Translates to: PNVANLGFLRVANATLSFDCTVS*LQGRHC Trigger: ACAGTGACGGCCTTGGAGCAAACTCACTGTACAGTC...AAAACTCAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040638.15 |
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| CDS-3UTR CAA 90 bp | GTCAGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGACCTGTTTTCTCTTaGATCTCACACAAGACGCTG | + |
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Preference number: 5 (lower is better) Translates to: VRPNVANLGFLRVANATLRPVFS*ISHKTL Trigger: CAGCGTCTTGTGTGAGATCAAAGAGAAAACAGGTCT...CAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| CDS-3UTR CAA 90 bp | GTCAGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGTTGCCGATGTTCTTCTaGTACCTGATTCGTTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: VRPNVANLGFLRVANATLLPMFF*YLIRLL Trigger: CAACAAACGAATCAGGTACAAGAAGAACATCGGCAA...CAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| CDS-3UTR CAA 90 bp | AGCTTGGATGATCCTGTGTTAAGAGTCAGACCCAATGTTGCCAATCTTGGCTTTGAGATTGGCCTCCTCTaGAAATTTGCCGATGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: SLDDPVLRVRPNVANLGFEIGLL*KFADVL Trigger: AAGAACATCGGCAAATTTCAAGAGGAGGCCAATCTC...AAAGCCAAGATTGGCAACATTGGGTCTGACTCTTAACACAGGATCATCCAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| CDS-3UTR CAA 90 bp | CCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTGAGTTTTTCTGCCAAAAGCATATaGTCCAGTCTCATTAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PNVANLGFLRVANATLSFSAKSI*SSLISW Trigger: CCAGCTAATGAGACTGGACAATATGCTTTTGGCAGA...AAAACTCAGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| CDS-3UTR CAA 90 bp | GTTACAAACGCTTTCCTTCTCCTAGTGCTCCAAATGCGCTTATCAAGGCATGTCTTCTGTGTGATAGATTaGTCTGATCTGGGTCAATTT | + |
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Preference number: 5 (lower is better) Translates to: VTNAFLLLVLQMRLSRHVFCVID*SDLGQF Trigger: AAATTGACCCAGATCAGACAAATCTATCACACAGAA...GACATGCCTTGATAAGCGCATTTGGAGCACTAGGAGAAGGAAAGCGTTTGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| CDS-3UTR CAA 90 bp | AGTCAGACCCAATGTTGCCAATCTTGGCTTTTTAAGGGTTGCAAATGCAACCCTTTCTGTGTGATAGATTaGTCTGATCTGGGTCAATTT | + |
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Preference number: 5 (lower is better) Translates to: SQTQCCQSWLFKGCKCNPFCVID*SDLGQF Trigger: AAATTGACCCAGATCAGACAAATCTATCACACAGAA...AGGGTTGCATTTGCAACCCTTAAAAAGCCAAGATTGGCAACATTGGGTCTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 |
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| CDS GCA 72 bp | ATGGTCATGATCTGGTGGAGGATGTCGCCGATGTCCTaGTTCCTGCCGTCGCCGTCCGCCCCTTCGTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: MVMIWWRMSPMS*FLPSPSAPSWP Trigger: CGGCCACGAAGGGGCGGACGGCGACGGCAGGAAGCAGGACATCGGCGACATCCTCCACCAGATCATGACCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040638.15 ENSMUST00000113132.9 ENSMUST00000143776.8 ENSMUST00000153278.8 |
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