Pregenerated sensors for PBLD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000112129Ensembl transcript IDs: ENSMUST00000020266.15, ENSMUST00000178684.3, ENSMUST00000219045.2, ENSMUST00000219687.2, ENSMUST00000219829.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCGCACCTCCATCAGGTGTCTTCCCTTTTGGGTTCACACGACGACTaGACCAAGCTCTGTGCATCTGCTGTTGAGTTGGGTTGGGTCGGG | + |
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Preference number: 1 (lower is better) Translates to: PHLHQVSSLLGSHDD*TKLCASAVELGWVG Trigger: CCCGACCCAACCCAACTCAACAGCAGATGCACAGAGCTTGGTTCAGTCGTCGTGTGAACCCAAAAGGGAAGACACCTGATGGAGGTGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR TCA 90 bp | GAAGGTACAGCCCGTCACAGCTGGGATGTGGCGACAGCAGGAACTTaGAGCCGCTGCTCTCATCTCATCCACAGTAGAAGCCAGCAATGG | + |
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Preference number: 1 (lower is better) Translates to: EGTARHSWDVATAGT*SRCSHLIHSRSQQW Trigger: CCATTGCTGGCTTCTACTGTGGATGAGATGAGAGCAGCGGCTTCAAGTTCCTGCTGTCGCCACATCCCAGCTGTGACGGGCTGTACCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219829.2 |
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| 3UTR CCA 90 bp | ACCAAGCTCTGTGCATCTGCTGTTGAGTTGGGTTGGGTCGGGTTCTaGGCTCTAGAGAAGACACTTGTGGAACAGTGGCCCCAAGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: TKLCASAVELGWVGF*ALEKTLVEQWPQAQ Trigger: CTGGGCTTGGGGCCACTGTTCCACAAGTGTCTTCTCTAGAGCCCAGAACCCGACCCAACCCAACTCAACAGCAGATGCACAGAGCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR GCA 90 bp | TGGTTGCTGGGATTTGAACTTCGGACCTTCGGAAGAGCAGTCGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCCCTCATCTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: WLLGFELRTFGRAVG*SYPLSHLTSPLIFP Trigger: AGGAAAGATGAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR TCA 90 bp | GGCAGGGCTGCTGTTGTTTCTGCCACCACACAGTGTGGTCCAGCTTaGCTGGACTGCAAGCTTCCAGATGATTCTCTGATCTCCCACTCA | + |
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Preference number: 1 (lower is better) Translates to: GRAAVVSATTQCGPA*LDCKLPDDSLISHS Trigger: TGAGTGGGAGATCAGAGAATCATCTGGAAGCTTGCAGTCCAGTCAAGCTGGACCACACTGTGTGGTGGCAGAAACAACAGCAGCCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219045.2 ENSMUST00000219687.2 |
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| 3UTR GCA 90 bp | ACGGGGCCTCCTCTGAGAACCCAGCCACTCACTACCTCCTATGTATaGAACATTGCCCTAATTGCACATGGCCTCAAAGAGGCTGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: TGPPLRTQPLTTSYV*NIALIAHGLKEAGG Trigger: TCCTCCAGCCTCTTTGAGGCCATGTGCAATTAGGGCAATGTTGCATACATAGGAGGTAGTGAGTGGCTGGGTTCTCAGAGGAGGCCCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR CCA 90 bp | TGCACACACAGGCAGAGTTCAGAGCCCACCATCGGGAAAGGATTCTaGAGACACTACCGCACCTCCATCAGGTGTCTTCCCTTTTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: CTHRQSSEPTIGKGF*RHYRTSIRCLPFWV Trigger: AACCCAAAAGGGAAGACACCTGATGGAGGTGCGGTAGTGTCTCCAGAATCCTTTCCCGATGGTGGGCTCTGAACTCTGCCTGTGTGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR CCA 90 bp | GGTCAGAGGACAGCATGTAGGAGTTGGATCTCTGCTTCTACCATATaGGTCCCAGGATTCGAACTCAGGGTGTCAGCCTTGGCAGCAAGC | + |
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Preference number: 1 (lower is better) Translates to: GQRTACRSWISASTI*VPGFELRVSALAAS Trigger: GCTTGCTGCCAAGGCTGACACCCTGAGTTCGAATCCTGGGACCCATATGGTAGAAGCAGAGATCCAACTCCTACATGCTGTCCTCTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR TCA 90 bp | TTTACATCTCCTCATAGAGGGATGGGGAGATCACGGGGCCTCCTCTaGGAACCCAGCCACTCACTACCTCCTATGTATGCAACATTGCCC | + |
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Preference number: 1 (lower is better) Translates to: FTSPHRGMGRSRGLL*EPSHSLPPMYATLP Trigger: GGGCAATGTTGCATACATAGGAGGTAGTGAGTGGCTGGGTTCTCAGAGGAGGCCCCGTGATCTCCCCATCCCTCTATGAGGAGATGTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR GCA 90 bp | TCCTCTGAGAACCCAGCCACTCACTACCTCCTATGTATGCAACATTaGCCTAATTGCACATGGCCTCAAAGAGGCTGGAGGACACAGGCC | + |
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Preference number: 1 (lower is better) Translates to: SSENPATHYLLCMQH*PNCTWPQRGWRTQA Trigger: GGCCTGTGTCCTCCAGCCTCTTTGAGGCCATGTGCAATTAGGGCAATGTTGCATACATAGGAGGTAGTGAGTGGCTGGGTTCTCAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR CCA 90 bp | CTTCTACCATATGGGTCCCAGGATTCGAACTCAGGGTGTCAGCCTTaGCAGCAAGCGTTTCAGCCACTCAGCAAGCCCCCAACTCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: LLPYGSQDSNSGCQP*QQAFQPLSKPPTLF Trigger: AAAAAGAGTTGGGGGCTTGCTGAGTGGCTGAAACGCTTGCTGCCAAGGCTGACACCCTGAGTTCGAATCCTGGGACCCATATGGTAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR GCA 90 bp | AACCCAGCCACTCACTACCTCCTATGTATGCAACATTGCCCTAATTaGACATGGCCTCAAAGAGGCTGGAGGACACAGGCCAGCAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: NPATHYLLCMQHCPN*TWPQRGWRTQASRD Trigger: ATCTCTGCTGGCCTGTGTCCTCCAGCCTCTTTGAGGCCATGTGCAATTAGGGCAATGTTGCATACATAGGAGGTAGTGAGTGGCTGGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR CCA 90 bp | ATTGGCAGTCATGATCAAAAGAAGGGGCAGCATCCCTATCTGCTGTaGGGACTGAAGATGCACACACAGGCAGAGTTCAGAGCCCACCAT | + |
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Preference number: 1 (lower is better) Translates to: IGSHDQKKGQHPYLL*GLKMHTQAEFRAHH Trigger: ATGGTGGGCTCTGAACTCTGCCTGTGTGTGCATCTTCAGTCCCCACAGCAGATAGGGATGCTGCCCCTTCTTTTGATCATGACTGCCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR TCA 90 bp | ATCATGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTTCGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: IMLQMVVSHHVVAGI*TSDLRKSSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR CCA 90 bp | GAGTCAGATCATGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTTCGGACCTTCGGAAGAGCAGTCGGGTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: ESDHVTDGCEPPCGC*DLNFGPSEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACATGATCTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR TCA 90 bp | TTGAACTTCGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTaGGCCATCTCACCAGCCCCCTCATCTTTCCTAGTATTATTACAT | + |
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Preference number: 1 (lower is better) Translates to: LNFGPSEEQSGALTH*AISPAPSSFLVLLH Trigger: ATGTAATAATACTAGGAAAGATGAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR TCA 90 bp | TTACATCAGGAGATGGACTTTTGCATGTTGCTCAGGACCATACCCTaGGCCAAGCAACTTCCATCTTCAGGAGTTCAGCTGTGCGCACTT | + |
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Preference number: 1 (lower is better) Translates to: LHQEMDFCMLLRTIP*AKQLPSSGVQLCAL Trigger: AAGTGCGCACAGCTGAACTCCTGAAGATGGAAGTTGCTTGGCTCAGGGTATGGTCCTGAGCAACATGCAAAAGTCCATCTCCTGATGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR TCA 90 bp | ATTGAAATGGCATTCTCTGGCTCCTTATCAGTGCACCTCTCACTTTaGTTGGCAGTCATGATCAAAAGAAGGGGCAGCATCCCTATCTGC | + |
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Preference number: 1 (lower is better) Translates to: IEMAFSGSLSVHLSL*LAVMIKRRGSIPIC Trigger: GCAGATAGGGATGCTGCCCCTTCTTTTGATCATGACTGCCAATCAAAGTGAGAGGTGCACTGATAAGGAGCCAGAGAATGCCATTTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR CCA 90 bp | CGAACTCAGGGTGTCAGCCTTGGCAGCAAGCGTTTCAGCCACTCAGCAAGCCCCCATCCCTATCTGCTGTaGGGACTGAAGATGCACACA | + |
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Preference number: 2 (lower is better) Translates to: RTQGVSLGSKRFSHSASPHPYLL*GLKMHT Trigger: TGTGTGCATCTTCAGTCCCCACAGCAGATAGGGATG...GGGGCTTGCTGAGTGGCTGAAACGCTTGCTGCCAAGGCTGACACCCTGAGTTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR CCA 90 bp | CGAACTCAGGGTGTCAGCCTTGGCAGCAAGCGTTTCAGCCACTCAGCAAGCCCCCCACATTTTAGGGGATaGAACCCACACCGCTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: RTQGVSLGSKRFSHSASPPHFRG*NPHRCK Trigger: CTTACAGCGGTGTGGGTTCCATCCCCTAAAATGTGG...GGGGCTTGCTGAGTGGCTGAAACGCTTGCTGCCAAGGCTGACACCCTGAGTTCG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR TCA 90 bp | GGTCAGAGGACAGCATGTAGGAGTTGGATCTCTGCTTCTACCATATGGGTCCCATCACGGGGCCTCCTCTaGGAACCCAGCCACTCACTA | + |
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Preference number: 2 (lower is better) Translates to: GQRTACRSWISASTIWVPSRGLL*EPSHSL Trigger: TAGTGAGTGGCTGGGTTCTCAGAGGAGGCCCCGTGA...TGGGACCCATATGGTAGAAGCAGAGATCCAACTCCTACATGCTGTCCTCTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR CCA 90 bp | CCATCAGGTGTCTTCCCTTTTGGGTTCACACGACGACTGAACCAAGCTCTGTGCACACTTGTGGAACAGTaGCCCCAAGCCCAGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: PSGVFPFGFTRRLNQALCTLVEQ*PQAQQE Trigger: CTCCTGCTGGGCTTGGGGCCACTGTTCCACAAGTGT...GCACAGAGCTTGGTTCAGTCGTCGTGTGAACCCAAAAGGGAAGACACCTGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR CCA 90 bp | CGAACTCAGGGTGTCAGCCTTGGCAGCAAGCGTTTCAGCCACTCAGCAAGCCCCAGGTGTCTTCCCTTTTaGGTTCACACGACGACTGAA | + |
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Preference number: 2 (lower is better) Translates to: RTQGVSLGSKRFSHSASPRCLPF*VHTTTE Trigger: TTCAGTCGTCGTGTGAACCCAAAAGGGAAGACACCT...GGGGCTTGCTGAGTGGCTGAAACGCTTGCTGCCAAGGCTGACACCCTGAGTTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGTGTGCCTTGGTTGGTCTTTGGAACCTTAGGGGGCGGAGAGAAAATGTTACACTTGTGGAACAGTaGCCCCAAGCCCAGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: WWCALVGLWNLRGRRENVTLVEQ*PQAQQE Trigger: CTCCTGCTGGGCTTGGGGCCACTGTTCCACAAGTGT...AACATTTTCTCTCCGCCCCCTAAGGTTCCAAAGACCAACCAAGGCACACCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGAGGACAGCATGTAGGAGTTGGATCTCTGCTTCTACCATATGGGTCCCATGGCCTCAAAGAGGCTaGAGGACACAGGCCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GQRTACRSWISASTIWVPWPQRG*RTQASR Trigger: TCTGCTGGCCTGTGTCCTCCAGCCTCTTTGAGGCCA...TGGGACCCATATGGTAGAAGCAGAGATCCAACTCCTACATGCTGTCCTCTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR CAA 90 bp | CCTGAGCCAAGCAACTTCCATCTTCAGGAGTTCAGCTGTGCGCACTaGCCAAAGATCATGCCAGCTGGGTCTGGCGACTGTTTACATCTC | + |
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Preference number: 2 (lower is better) Translates to: PEPSNFHLQEFSCAH*PKIMPAGSGDCLHL Trigger: GAGATGTAAACAGTCGCCAGACCCAGCTGGCATGATCTTTGGCAAGTGCGCACAGCTGAACTCCTGAAGATGGAAGTTGCTTGGCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR TCA 90 bp | ACTTTTGCATGTTGCTCAGGACCATACCCTGAGCCAAGCAACTTCCATCTTCAGTCACGGGGCCTCCTCTaGGAACCCAGCCACTCACTA | + |
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Preference number: 2 (lower is better) Translates to: TFACCSGPYPEPSNFHLQSRGLL*EPSHSL Trigger: TAGTGAGTGGCTGGGTTCTCAGAGGAGGCCCCGTGA...CTGAAGATGGAAGTTGCTTGGCTCAGGGTATGGTCCTGAGCAACATGCAAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR TCA 90 bp | CTGTCGAAACACAAGGCAGGGCTGCTGTTGTTTCTGCCACCACACAGTGTGGTCCTGCAAGCTTCCAGATaGTTCTCTGATCTCCCACTC | + |
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Preference number: 2 (lower is better) Translates to: LSKHKAGLLLFLPPHSVVLQASR*FSDLPL Trigger: GAGTGGGAGATCAGAGAATCATCTGGAAGCTTGCAG...GACCACACTGTGTGGTGGCAGAAACAACAGCAGCCCTGCCTTGTGTTTCGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219045.2 ENSMUST00000219687.2 |
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| 3UTR CAA 90 bp | GATCATGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTTCGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCAC | + |
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Preference number: 2 (lower is better) Translates to: DHVTDGCEPPCGCWD*NFGPSEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACATGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR TCA 90 bp | AAACACAAGGCAGGGCTGCTGTTGTTTCTGCCACCACACAGTGTGGTCCAGCTTCTGCAAGCTTCCAGATaGTTCTCTGATCTCCCACTC | + |
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Preference number: 2 (lower is better) Translates to: KHKAGLLLFLPPHSVVQLLQASR*FSDLPL Trigger: GAGTGGGAGATCAGAGAATCATCTGGAAGCTTGCAG...AAGCTGGACCACACTGTGTGGTGGCAGAAACAACAGCAGCCCTGCCTTGTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219045.2 ENSMUST00000219687.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTGCAGCACAGCCTCCAACAGTTTTCAGTCTACTCATCTTTCCTAGTATTTGGCCTCAAAGAGGCTaGAGGACACAGGCCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: SPAAQPPTVFSLLIFPSIWPQRG*RTQASR Trigger: TCTGCTGGCCTGTGTCCTCCAGCCTCTTTGAGGCCA...AATACTAGGAAAGATGAGTAGACTGAAAACTGTTGGAGGCTGTGCTGCAGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTGCAGCACAGCCTCCAACAGTTTTCAGTCTACTCATCTTTCCTAGTATTCTAGGGGAGCTTTGGTaGTGGTGTGCCTTGGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: SPAAQPPTVFSLLIFPSILGELW*WCALVG Trigger: ACCAACCAAGGCACACCACCACCAAAGCTCCCCTAG...AATACTAGGAAAGATGAGTAGACTGAAAACTGTTGGAGGCTGTGCTGCAGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR CCA 90 bp | ACTTTTGCATGTTGCTCAGGACCATACCCTGAGCCAAGCAACTTCCATCTTCAGTGCCCTAATTGCACATaGCCTCAAAGAGGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: TFACCSGPYPEPSNFHLQCPNCT*PQRGWR Trigger: CCTCCAGCCTCTTTGAGGCCATGTGCAATTAGGGCA...CTGAAGATGGAAGTTGCTTGGCTCAGGGTATGGTCCTGAGCAACATGCAAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR GCA 90 bp | ACTTTTGCATGTTGCTCAGGACCATACCCTGAGCCAAGCAACTTCCATCTTCAGGCTTTGGTGGTGGTGTaGCTTGGTTGGTCTTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: TFACCSGPYPEPSNFHLQALVVV*LGWSLE Trigger: TTCCAAAGACCAACCAAGGCACACCACCACCAAAGC...CTGAAGATGGAAGTTGCTTGGCTCAGGGTATGGTCCTGAGCAACATGCAAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR CCA 90 bp | CCTAGTATTATTACATCAGGAGATGGACTTTTGCATGTTGCTCAGGACCATACCCTAGGGGAGCTTTGGTaGTGGTGTGCCTTGGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: PSIITSGDGLLHVAQDHTLGELW*WCALVG Trigger: ACCAACCAAGGCACACCACCACCAAAGCTCCCCTAG...GGTATGGTCCTGAGCAACATGCAAAAGTCCATCTCCTGATGTAATAATACTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR CCA 90 bp | CCTAGTATTATTACATCAGGAGATGGACTTTTGCATGTTGCTCAGGACCATACCTGCCCTAATTGCACATaGCCTCAAAGAGGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: PSIITSGDGLLHVAQDHTCPNCT*PQRGWR Trigger: CCTCCAGCCTCTTTGAGGCCATGTGCAATTAGGGCA...GGTATGGTCCTGAGCAACATGCAAAAGTCCATCTCCTGATGTAATAATACTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR GCA 90 bp | ACTTTTGCATGTTGCTCAGGACCATACCCTGAGCCAAGCAACTTCCATCTTCAGGGAAACCTTCACCTCTaGTCTGTAAAGAAGTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: TFACCSGPYPEPSNFHLQGNLHL*SVKKSD Trigger: ATCAGACTTCTTTACAGAGCAGAGGTGAAGGTTTCC...CTGAAGATGGAAGTTGCTTGGCTCAGGGTATGGTCCTGAGCAACATGCAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR GCA 90 bp | CCTAGTATTATTACATCAGGAGATGGACTTTTGCATGTTGCTCAGGACCATACCGGAAACCTTCACCTCTaGTCTGTAAAGAAGTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: PSIITSGDGLLHVAQDHTGNLHL*SVKKSD Trigger: ATCAGACTTCTTTACAGAGCAGAGGTGAAGGTTTCC...GGTATGGTCCTGAGCAACATGCAAAAGTCCATCTCCTGATGTAATAATACTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR CCA 90 bp | CCTAGTATTATTACATCAGGAGATGGACTTTTGCATGTTGCTCAGGACCATACCATACCTCAATTGAAATaGCATTCTCTGGCTCCTTAT | + |
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Preference number: 2 (lower is better) Translates to: PSIITSGDGLLHVAQDHTIPQLK*HSLAPY Trigger: ATAAGGAGCCAGAGAATGCCATTTCAATTGAGGTAT...GGTATGGTCCTGAGCAACATGCAAAAGTCCATCTCCTGATGTAATAATACTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR-3UTR CAA 90 bp | CGAACTCAGGGTGTCAGCCTTGGCAGCAAGCGTTTCAGCCACTCAGCAAGCCCCTGGTGGTGGTGTGCCTaGGTTGGTCTTTGGAACCTT | + |
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Preference number: 3 (lower is better) Translates to: RTQGVSLGSKRFSHSASPWWWCA*VGLWNL Trigger: AAGGTTCCAAAGACCAACCAAGGCACACCACCACCA...GGGGCTTGCTGAGTGGCTGAAACGCTTGCTGCCAAGGCTGACACCCTGAGTTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR TCA 72 bp | GCCCGTCACAGCTGGGATGTGGCGACAGCAGGAACTTaGAGCCGCTGCTCTCATCTCATCCACAGTAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: ARHSWDVATAGT*SRCSHLIHSRS Trigger: GCTTCTACTGTGGATGAGATGAGAGCAGCGGCTTCAAGTTCCTGCTGTCGCCACATCCCAGCTGTGACGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219829.2 |
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| 3UTR GCA 72 bp | GGATTTGAACTTCGGACCTTCGGAAGAGCAGTCGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: GFELRTFGRAVG*SYPLSHLTSPL Trigger: GAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR CCA 72 bp | TATGGGTCCCAGGATTCGAACTCAGGGTGTCAGCCTTaGCAGCAAGCGTTTCAGCCACTCAGCAAGCCCCCA | + |
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Preference number: 3 (lower is better) Translates to: YGSQDSNSGCQP*QQAFQPLSKPP Trigger: TGGGGGCTTGCTGAGTGGCTGAAACGCTTGCTGCCAAGGCTGACACCCTGAGTTCGAATCCTGGGACCCATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| 3UTR CCA 72 bp | TCCCAGTTGAAGGTACAGCCCGTCACAGCTGGGATGTaGCGACAGCAGGAACTTGAAGCCGCTGCTCTCATC | + |
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Preference number: 3 (lower is better) Translates to: SQLKVQPVTAGM*RQQELEAAALI Trigger: GATGAGAGCAGCGGCTTCAAGTTCCTGCTGTCGCCACATCCCAGCTGTGACGGGCTGTACCTTCAACTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219829.2 |
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| 3UTR TCA 72 bp | GGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTaGGCCATCTCACCAGCCCCCTCATCTTTCCTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: GPSEEQSGALTH*AISPAPSSFLV Trigger: TACTAGGAAAGATGAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR CCA 72 bp | AGGCAGAGTTCAGAGCCCACCATCGGGAAAGGATTCTaGAGACACTACCGCACCTCCATCAGGTGTCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RQSSEPTIGKGF*RHYRTSIRCLP Trigger: GGGAAGACACCTGATGGAGGTGCGGTAGTGTCTCCAGAATCCTTTCCCGATGGTGGGCTCTGAACTCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTTCGGACCTTCGGAAGAGCAGTCGGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QMVVSHHVVAGI*TSDLRKSSRVL Trigger: GAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR GCA 72 bp | ACCTCACAGCCCATACGGTCCTACGTACCCCAGCCCTaGAGCACAGCCTCCAACAGTTTTCAGTCTACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TSQPIRSYVPQP*STASNSFQSTH Trigger: ATGAGTAGACTGAAAACTGTTGGAGGCTGTGCTGCAGGGCTGGGGTACGTAGGACCGTATGGGCTGTGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR GCA 72 bp | GACTGTCGAAACACAAGGCAGGGCTGCTGTTGTTTCTaGCACCACACAGTGTGGTCCAGCTTGACTGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: DCRNTRQGCCCF*HHTVWSSLTGL Trigger: CAGTCCAGTCAAGCTGGACCACACTGTGTGGTGGCAGAAACAACAGCAGCCCTGCCTTGTGTTTCGACAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219045.2 ENSMUST00000219687.2 |
||
| 3UTR CCA 72 bp | CGCTGCTCTCATCTCATCCACAGTAGAAGCCAGCAATaGACGCAGCTGCTCCTCGACCCCTCTCTCCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: RCSHLIHSRSQQ*TQLLLDPSLHL Trigger: TAAATGGAGAGAGGGGTCGAGGAGCAGCTGCGTCCATTGCTGGCTTCTACTGTGGATGAGATGAGAGCAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219829.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGGAAAGAGAGAGTAGGCACAGGTACACAGGTCAGAGGGCAACTTCCTAGTACAGTGTGGTCCAGCTaGACTGGACTGCAAGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RGKERVGTGTQVRGQLPSTVWSS*TGLQAS Trigger: GGAAGCTTGCAGTCCAGTCAAGCTGGACCACACTGT...ACTAGGAAGTTGCCCTCTGACCTGTGTACCTGTGCCTACTCTCTCTTTCCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000219045.2 ENSMUST00000219687.2 |
||
| 3UTR TCA 72 bp | ACACGACGACTGAACCAAGCTCTGTGCATCTGCTGTTaGGTTGGGTTGGGTCGGGTTCTGGGCTCTAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TRRLNQALCICC*VGLGRVLGSRE Trigger: TTCTCTAGAGCCCAGAACCCGACCCAACCCAACTCAACAGCAGATGCACAGAGCTTGGTTCAGTCGTCGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR GCA 72 bp | CAACTTCCTAGTGACTGTCGAAACACAAGGCAGGGCTaGTGTTGTTTCTGCCACCACACAGTGTGGTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QLPSDCRNTRQG*CCFCHHTVWSS Trigger: GCTGGACCACACTGTGTGGTGGCAGAAACAACAGCAGCCCTGCCTTGTGTTTCGACAGTCACTAGGAAGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219045.2 ENSMUST00000219687.2 |
||
| 3UTR TCA 72 bp | CATCAGGTGTCTTCCCTTTTGGGTTCACACGACGACTaGACCAAGCTCTGTGCATCTGCTGTTGAGTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: HQVSSLLGSHDD*TKLCASAVELG Trigger: ACCCAACTCAACAGCAGATGCACAGAGCTTGGTTCAGTCGTCGTGTGAACCCAAAAGGGAAGACACCTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR TCA 72 bp | GCTGTTGTTTCTGCCACCACACAGTGTGGTCCAGCTTaGCTGGACTGCAAGCTTCCAGATGATTCTCTGATC | + |
|
Preference number: 3 (lower is better) Translates to: AVVSATTQCGPA*LDCKLPDDSLI Trigger: GATCAGAGAATCATCTGGAAGCTTGCAGTCCAGTCAAGCTGGACCACACTGTGTGGTGGCAGAAACAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219045.2 ENSMUST00000219687.2 |
||
| 3UTR GCA 72 bp | AACCCAGCCACTCACTACCTCCTATGTATGCAACATTaGCCTAATTGCACATGGCCTCAAAGAGGCTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NPATHYLLCMQH*PNCTWPQRGWR Trigger: CCTCCAGCCTCTTTGAGGCCATGTGCAATTAGGGCAATGTTGCATACATAGGAGGTAGTGAGTGGCTGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR CCA 72 bp | CATGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTTCGGACCTTCGGAAGAGCAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: HVTDGCEPPCGC*DLNFGPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR CCA 72 bp | ACAGCATGTAGGAGTTGGATCTCTGCTTCTACCATATaGGTCCCAGGATTCGAACTCAGGGTGTCAGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TACRSWISASTI*VPGFELRVSAL Trigger: CAAGGCTGACACCCTGAGTTCGAATCCTGGGACCCATATGGTAGAAGCAGAGATCCAACTCCTACATGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCTGCAGCACAGCCTCCAACAGTTTTCAGTCTACTCATCTTTCCTAGTATTTCTGTGCATCTGCTGTaGAGTTGGGTTGGGTCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SPAAQPPTVFSLLIFPSISVHLL*SWVGSG Trigger: ACCCGACCCAACCCAACTCAACAGCAGATGCACAGA...AATACTAGGAAAGATGAGTAGACTGAAAACTGTTGGAGGCTGTGCTGCAGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR TCA 72 bp | GAGATGGACTTTTGCATGTTGCTCAGGACCATACCCTaGGCCAAGCAACTTCCATCTTCAGGAGTTCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EMDFCMLLRTIP*AKQLPSSGVQL Trigger: CAGCTGAACTCCTGAAGATGGAAGTTGCTTGGCTCAGGGTATGGTCCTGAGCAACATGCAAAAGTCCATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR GCA 72 bp | GATCATGTTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTTCGGACCTTCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DHVTDGCEPPCG*WDLNFGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACATGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCTGCAGCACAGCCTCCAACAGTTTTCAGTCTACTCATCTTTCCTAGTATTTGGTGGTGGTGTGCCTaGGTTGGTCTTTGGAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: SPAAQPPTVFSLLIFPSIWWWCA*VGLWNL Trigger: AAGGTTCCAAAGACCAACCAAGGCACACCACCACCA...AATACTAGGAAAGATGAGTAGACTGAAAACTGTTGGAGGCTGTGCTGCAGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR TCA 72 bp | CCTTATCAGTGCACCTCTCACTTTGATTGGCAGTCATaGTCAAAAGAAGGGGCAGCATCCCTATCTGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PYQCTSHFDWQS*SKEGAASLSAV Trigger: CACAGCAGATAGGGATGCTGCCCCTTCTTTTGATCATGACTGCCAATCAAAGTGAGAGGTGCACTGATAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTAGTATTATTACATCAGGAGATGGACTTTTGCATGTTGCTCAGGACCATACCTCTGTGCATCTGCTGTaGAGTTGGGTTGGGTCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PSIITSGDGLLHVAQDHTSVHLL*SWVGSG Trigger: ACCCGACCCAACCCAACTCAACAGCAGATGCACAGA...GGTATGGTCCTGAGCAACATGCAAAAGTCCATCTCCTGATGTAATAATACTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCTGCAGCACAGCCTCCAACAGTTTTCAGTCTACTCATCTTTCCTAGTATTTCAGGAGATGGACTTTaGCATGTTGCTCAGGACCAT | + |
|
Preference number: 3 (lower is better) Translates to: SPAAQPPTVFSLLIFPSISGDGL*HVAQDH Trigger: ATGGTCCTGAGCAACATGCAAAAGTCCATCTCCTGA...AATACTAGGAAAGATGAGTAGACTGAAAACTGTTGGAGGCTGTGCTGCAGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR CCA 72 bp | CATTTATCCAGCCCAGGGAATGTCCCACAATTAAGATaGGCCTTCCCACTTGAATTATCGTCATCGAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HLSSPGNVPQLR*AFPLELSSSRE Trigger: TTCTCTCGATGACGATAATTCAAGTGGGAAGGCCCATCTTAATTGTGGGACATTCCCTGGGCTGGATAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219829.2 |
||
| CDS-3UTR GCA 90 bp | GTCGAAACACAAGGCAGGGCTGCTGTTGTTTCTGCCACCACACAGTGTGGTCCATGTCTGAGGGCTCCCTaGCCTGCTCGGAGCCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VETQGRAAVVSATTQCGPCLRAP*PARSPL Trigger: AAGCGGGCTCCGAGCAGGGCAGGGAGCCCTCAGACA...TGGACCACACTGTGTGGTGGCAGAAACAACAGCAGCCCTGCCTTGTGTTTCGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219687.2 |
||
| CDS-3UTR TCA 90 bp | CGAACTCAGGGTGTCAGCCTTGGCAGCAAGCGTTTCAGCCACTCAGCAAGCCCCGATGAAAGCCGTTTCTaGGAGGTTCATCTCCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RTQGVSLGSKRFSHSASPDESRF*EVHLPR Trigger: GCGAGGGAGATGAACCTCTCAGAAACGGCTTTCATC...GGGGCTTGCTGAGTGGCTGAAACGCTTGCTGCCAAGGCTGACACCCTGAGTTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| CDS-3UTR GCA 90 bp | GTGACTGTCGAAACACAAGGCAGGGCTGCTGTTGTTTCTGCCACCACACAGTGTTGCTGGGGTTACAGGTaGGCGCTCCAGGAGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VTVETQGRAAVVSATTQCCWGYR*ALQEAD Trigger: GTCTGCCTCCTGGAGCGCGCACCTGTAACCCCAGCA...ACACTGTGTGGTGGCAGAAACAACAGCAGCCCTGCCTTGTGTTTCGACAGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219045.2 ENSMUST00000219687.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGAGAGAGTAGGCACAGGTACACAGGTCAGAGGGCAACTTCCTAGTGACTGCTGGGGTTACAGGTaGGCGCTCCAGGAGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GKERVGTGTQVRGQLPSDCWGYR*ALQEAD Trigger: GTCTGCCTCCTGGAGCGCGCACCTGTAACCCCAGCA...GTCACTAGGAAGTTGCCCTCTGACCTGTGTACCTGTGCCTACTCTCTCTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219045.2 ENSMUST00000219687.2 |
||
| 3UTR CAA 72 bp | ATTGGTGCCCTAGGGGAGCTTTGGTGGTGGTGTGCCTaGGTTGGTCTTTGGAACCTTAGGGGGCGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IGALGELWWWCA*VGLWNLRGRRE Trigger: TTCTCTCCGCCCCCTAAGGTTCCAAAGACCAACCAAGGCACACCACCACCAAAGCTCCCCTAGGGCACCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| CDS-3UTR CCA 90 bp | GAGAGAACCCCTCAGAGTCACGCTCAGAGGCCCAGAGTGTGTAGCCAGCTGTTTACGGCGCGAAGTATCTaGAGTAGAAGTCATACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ERTPQSHAQRPRVCSQLFTARSI*SRSHTG Trigger: CCCCGTATGACTTCTACTCCAGATACTTCGCGCCGT...AAACAGCTGGCTACACACTCTGGGCCTCTGAGCGTGACTCTGAGGGGTTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219829.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGGACAGCATGTAGGAGTTGGATCTCTGCTTCTACCATATGGGTCCCAGGACGTCTTCCTCCAATGTaGGCTCCAGGAGGCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: QRTACRSWISASTIWVPGRLPPM*APGGRL Trigger: CAGTCTGCCTCCTGGAGCGCACATTGGAGGAAGACG...TCCTGGGACCCATATGGTAGAAGCAGAGATCCAACTCCTACATGCTGTCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTTCGGACCTTCGGAAGAGCAGTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NFGPSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| CDS-3UTR TCA 90 bp | GGTCAGAGGACAGCATGTAGGAGTTGGATCTCTGCTTCTACCATATGGGTCCCAAGCGAGAGCTTTGTGTaGAGCTGTCAGTCGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQRTACRSWISASTIWVPSESFV*SCQSAA Trigger: TGCAGCCGACTGACAGCTTCACACAAAGCTCTCGCT...TGGGACCCATATGGTAGAAGCAGAGATCCAACTCCTACATGCTGTCCTCTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| CDS-3UTR TCA 90 bp | TGGTGGTGTGCCTTGGTTGGTCTTTGGAACCTTAGGGGGCGGAGAGAAAATGTTAGCGAGAGCTTTGTGTaGAGCTGTCAGTCGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WWCALVGLWNLRGRRENVSESFV*SCQSAA Trigger: TGCAGCCGACTGACAGCTTCACACAAAGCTCTCGCT...AACATTTTCTCTCCGCCCCCTAAGGTTCCAAAGACCAACCAAGGCACACCACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| CDS-3UTR CCA 90 bp | AGTGACTGTCGAAACACAAGGCAGGGCTGCTGTTGTTTCTGCCACCACACAGTGCTTCATTTTCCTCGCTaGCTTTGTCTGAGGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SDCRNTRQGCCCFCHHTVLHFPR*LCLRAP Trigger: GGGAGCCCTCAGACAAAGCCAGCGAGGAAAATGAAG...CACTGTGTGGTGGCAGAAACAACAGCAGCCCTGCCTTGTGTTTCGACAGTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219687.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGGACAGCATGTAGGAGTTGGATCTCTGCTTCTACCATATGGGTCCCAGGAGATGAAAGCCGTTTCTaGGAGGTTCATCTCCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QRTACRSWISASTIWVPGDESRF*EVHLPR Trigger: GCGAGGGAGATGAACCTCTCAGAAACGGCTTTCATC...TCCTGGGACCCATATGGTAGAAGCAGAGATCCAACTCCTACATGCTGTCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| CDS-3UTR TCA 90 bp | GAGATTAGGGGAGCTGGGCTCCATCTGTGCCACTATAGGAAGGTCACCATTGATGCATCTCTTTCTTCCTaGGCTGCTGGGACCAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: EIRGAGLHLCHYRKVTIDASLSS*AAGTSN Trigger: GTTACTGGTCCCAGCAGCTCAGGAAGAAAGAGATGC...ATCAATGGTGACCTTCCTATAGTGGCACAGATGGAGCCCAGCTCCCCTAATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| CDS-3UTR TCA 90 bp | TGGTGGTGTGCCTTGGTTGGTCTTTGGAACCTTAGGGGGCGGAGAGAAAATGTTGCATCTCTTTCTTCCTaGGCTGCTGGGACCAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: WWCALVGLWNLRGRRENVASLSS*AAGTSN Trigger: GTTACTGGTCCCAGCAGCTCAGGAAGAAAGAGATGC...AACATTTTCTCTCCGCCCCCTAAGGTTCCAAAGACCAACCAAGGCACACCACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| CDS-3UTR CCA 90 bp | GAGATTAGGGGAGCTGGGCTCCATCTGTGCCACTATAGGAAGGTCACCATTGATGGGGACTTCACTCACTaGCGTAAACCATCTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EIRGAGLHLCHYRKVTIDGDFTH*RKPSQS Trigger: GGACTGAGATGGTTTACGCCAGTGAGTGAAGTCCCC...ATCAATGGTGACCTTCCTATAGTGGCACAGATGGAGCCCAGCTCCCCTAATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| CDS-3UTR CCA 90 bp | GGTCAGAGGACAGCATGTAGGAGTTGGATCTCTGCTTCTACCATATGGGTCCCACATCTTCTGCTCTTCTaGCCTTTAGCTCCCCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GQRTACRSWISASTIWVPHLLLF*PLAPRS Trigger: TGAGCGGGGAGCTAAAGGCCAGAAGAGCAGAAGATG...TGGGACCCATATGGTAGAAGCAGAGATCCAACTCCTACATGCTGTCCTCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| CDS-3UTR CCA 90 bp | CAGAGGACAGCATGTAGGAGTTGGATCTCTGCTTCTACCATATGGGTCCCAGGAACGGCGCGAAGTATCTaGAGTAGAAGTCATACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRTACRSWISASTIWVPGTARSI*SRSHTG Trigger: CCCCGTATGACTTCTACTCCAGATACTTCGCGCCGT...TCCTGGGACCCATATGGTAGAAGCAGAGATCCAACTCCTACATGCTGTCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| CDS-3UTR CCA 90 bp | GATGGAACCCACACCGCTGTAAGGAAACCTTCACCTCTGCTCTGTAAAGAAGTCCATCTTCTGCTCTTCTaGCCTTTAGCTCCCCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DGTHTAVRKPSPLLCKEVHLLLF*PLAPRS Trigger: TGAGCGGGGAGCTAAAGGCCAGAAGAGCAGAAGATG...GACTTCTTTACAGAGCAGAGGTGAAGGTTTCCTTACAGCGGTGTGGGTTCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| CDS-3UTR CCA 90 bp | GAAGGGGCAGCATCCCTATCTGCTGTGGGGACTGAAGATGCACACACAGGCAGAAAGTCTTCAACTTCATaGAAGTCCTGGGGAAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EGAASLSAVGTEDAHTGRKSSTS*KSWGKV Trigger: AACCTTTCCCCAGGACTTCCATGAAGTTGAAGACTT...TCTGCCTGTGTGTGCATCTTCAGTCCCCACAGCAGATAGGGATGCTGCCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR CAA 72 bp | AGAAGTCTGATAACTCATTGGTGCCCTAGGGGAGCTTaGGTGGTGGTGTGCCTTGGTTGGTCTTTGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLITHWCPRGA*VVVCLGWSLEP Trigger: AGGTTCCAAAGACCAACCAAGGCACACCACCACCAAAGCTCCCCTAGGGCACCAATGAGTTATCAGACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| CDS-3UTR CCA 90 bp | ACTTTTGCATGTTGCTCAGGACCATACCCTGAGCCAAGCAACTTCCATCTTCAGGGGGACTTCACTCACTaGCGTAAACCATCTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFACCSGPYPEPSNFHLQGDFTH*RKPSQS Trigger: GGACTGAGATGGTTTACGCCAGTGAGTGAAGTCCCC...CTGAAGATGGAAGTTGCTTGGCTCAGGGTATGGTCCTGAGCAACATGCAAAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| CDS-3UTR GCA 90 bp | CCTAGTATTATTACATCAGGAGATGGACTTTTGCATGTTGCTCAGGACCATACCCGTCTTCCTCCAATGTaGGCTCCAGGAGGCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: PSIITSGDGLLHVAQDHTRLPPM*APGGRL Trigger: CAGTCTGCCTCCTGGAGCGCACATTGGAGGAAGACG...GGTATGGTCCTGAGCAACATGCAAAAGTCCATCTCCTGATGTAATAATACTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| CDS-3UTR CCA 90 bp | AGCCCTGCAGCACAGCCTCCAACAGTTTTCAGTCTACTCATCTTTCCTAGTATTACGGCGCGAAGTATCTaGAGTAGAAGTCATACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPAAQPPTVFSLLIFPSITARSI*SRSHTG Trigger: CCCCGTATGACTTCTACTCCAGATACTTCGCGCCGT...AATACTAGGAAAGATGAGTAGACTGAAAACTGTTGGAGGCTGTGCTGCAGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| 3UTR CAA 72 bp | CTGGGCTCCATCTGTGCCACTATAGGAAGGTCACCATaGATGCTATGTAAAAGCCCTTCTGGTGCCACATTT | + |
|
Preference number: 4 (lower is better) Translates to: LGSICATIGRSP*MLCKSPSGATF Trigger: AAATGTGGCACCAGAAGGGCTTTTACATAGCATCAATGGTGACCTTCCTATAGTGGCACAGATGGAGCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
||
| CDS-3UTR TCA 90 bp | AGCCCTGCAGCACAGCCTCCAACAGTTTTCAGTCTACTCATCTTTCCTAGTATTCTGTTCTGTATTTTGTaGAACAGCACAGCCGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPAAQPPTVFSLLIFPSILFCIL*NSTAAE Trigger: CTCTGCGGCTGTGCTGTTTCACAAAATACAGAACAG...AATACTAGGAAAGATGAGTAGACTGAAAACTGTTGGAGGCTGTGCTGCAGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178684.3 |
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| 3UTR CAA 72 bp | ATCTTTCCTAGTATTATTACATCAGGAGATGGACTTTaGCATGTTGCTCAGGACCATACCCTGAGCCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: IFPSIITSGDGL*HVAQDHTLSQA Trigger: TGCTTGGCTCAGGGTATGGTCCTGAGCAACATGCAAAAGTCCATCTCCTGATGTAATAATACTAGGAAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS-3UTR TCA 90 bp | CCTAGTATTATTACATCAGGAGATGGACTTTTGCATGTTGCTCAGGACCATACCTTATTACGTATTTTGTaGAACAGCACAGCCGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PSIITSGDGLLHVAQDHTLLRIL*NSTAAE Trigger: CTCTGCGGCTGTGCTGTTTCACAAAATACGTAATAA...GGTATGGTCCTGAGCAACATGCAAAAGTCCATCTCCTGATGTAATAATACTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020266.15 |
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| CDS GCA 90 bp | GGTTCATCTCCCTCGCAATTTGCTGATGGGCGTCTTCCTCCAATGTaGGCTCCAGGAGGCAGACTGCGGCAGGATTGCCCCGGAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: GSSPSQFADGRLPPM*APGGRLRQDCPGKL Trigger: CAGCTTTCCGGGGCAATCCTGCCGCAGTCTGCCTCCTGGAGCGCACATTGGAGGAAGACGCCCATCAGCAAATTGCGAGGGAGATGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS-3UTR CAA 90 bp | GAAGGGGCAGCATCCCTATCTGCTGTGGGGACTGAAGATGCACACACAGGCAGACCCCCAGGCTCTCCTTaGACAGTGAGGATGAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: EGAASLSAVGTEDAHTGRPPGSP*TVRMRP Trigger: AGGCCTCATCCTCACTGTCAAAGGAGAGCCTGGGGG...TCTGCCTGTGTGTGCATCTTCAGTCCCCACAGCAGATAGGGATGCTGCCCCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS CCA 90 bp | CGCAGAGGCCAGTGTGGCGTGGCCGCACAAGGGGACTTCACTCACTaGCGTAAACCATCTCAGTCCAAAGCGAGAGCTTTGTGTGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: RRGQCGVAAQGDFTH*RKPSQSKARALCEA Trigger: AGCTTCACACAAAGCTCTCGCTTTGGACTGAGATGGTTTACGCCAGTGAGTGAAGTCCCCTTGTGCGGCCACGCCACACTGGCCTCTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS GCA 90 bp | GGAGCTTCATTTTCCTCGCTGGCTTTGTCTGAGGGCTCCCTGCCCTaGTCGGAGCCCGCTTCACTTCCAGCTTTAGAGATACCAATCCTC | + |
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Preference number: 5 (lower is better) Translates to: GASFSSLALSEGSLP*SEPASLPALEIPIL Trigger: GAGGATTGGTATCTCTAAAGCTGGAAGTGAAGCGGGCTCCGAGCAGGGCAGGGAGCCCTCAGACAAAGCCAGCGAGGAAAATGAAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219687.2 |
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| CDS-3UTR CAA 90 bp | GGGAAAGAGAGAGTAGGCACAGGTACACAGGTCAGAGGGCAACTTCCTAGTGACTTTTCCTCGCTGGCTTaGTCTGAGGGCTCCCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: GKERVGTGTQVRGQLPSDFSSLA*SEGSLP Trigger: GGGCAGGGAGCCCTCAGACAAAGCCAGCGAGGAAAA...GTCACTAGGAAGTTGCCCTCTGACCTGTGTACCTGTGCCTACTCTCTCTTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219687.2 |
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| CDS TCA 90 bp | CTGATGAAAGCCGTTTCTGAGAGGTTCATCTCCCTCGCAATTTGCTaGTGGGCGTCTTCCTCCAATGTGCGCTCCAGGAGGCAGACTGCG | + |
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Preference number: 5 (lower is better) Translates to: LMKAVSERFISLAIC*WASSSNVRSRRQTA Trigger: CGCAGTCTGCCTCCTGGAGCGCACATTGGAGGAAGACGCCCATCAGCAAATTGCGAGGGAGATGAACCTCTCAGAAACGGCTTTCATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS-3UTR CAA 90 bp | GAGAGAACCCCTCAGAGTCACGCTCAGAGGCCCAGAGTGTGTAGCCAGCTGTTTAGTCCTGGGGAAAGGTaGGGTAGACAGGAAAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: ERTPQSHAQRPRVCSQLFSPGER*GRQESP Trigger: TGGACTTTCCTGTCTACCCAACCTTTCCCCAGGACT...AAACAGCTGGCTACACACTCTGGGCCTCTGAGCGTGACTCTGAGGGGTTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219829.2 |
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| CDS-3UTR CAA 90 bp | TTCCCACTTGAATTATCGTCATCGAGAGAACCCCTCAGAGTCACGCTCAGAGGCCCCCCAGGCTCTCCTTaGACAGTGAGGATGAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: FPLELSSSREPLRVTLRGPPGSP*TVRMRP Trigger: AGGCCTCATCCTCACTGTCAAAGGAGAGCCTGGGGG...GCCTCTGAGCGTGACTCTGAGGGGTTCTCTCGATGACGATAATTCAAGTGGGAA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000219829.2 |
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| CDS-3UTR CAA 90 bp | GATGGAACCCACACCGCTGTAAGGAAACCTTCACCTCTGCTCTGTAAAGAAGTCCCCCCAGGCTCTCCTTaGACAGTGAGGATGAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: DGTHTAVRKPSPLLCKEVPPGSP*TVRMRP Trigger: AGGCCTCATCCTCACTGTCAAAGGAGAGCCTGGGGG...GACTTCTTTACAGAGCAGAGGTGAAGGTTTCCTTACAGCGGTGTGGGTTCCATC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS TCA 90 bp | TGTGAAGCTGTCAGTCGGCTGCAGTTTCCTGATGAAAGCCGTTTCTaGGAGGTTCATCTCCCTCGCAATTTGCTGATGGGCGTCTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: CEAVSRLQFPDESRF*EVHLPRNLLMGVFL Trigger: GAGGAAGACGCCCATCAGCAAATTGCGAGGGAGATGAACCTCTCAGAAACGGCTTTCATCAGGAAACTGCAGCCGACTGACAGCTTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS-3UTR CAA 90 bp | TGGTGGTGTGCCTTGGTTGGTCTTTGGAACCTTAGGGGGCGGAGAGAAAATGTTAGTCCTGGGGAAAGGTaGGGTAGACAGGAAAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: WWCALVGLWNLRGRRENVSPGER*GRQESP Trigger: TGGACTTTCCTGTCTACCCAACCTTTCCCCAGGACT...AACATTTTCTCTCCGCCCCCTAAGGTTCCAAAGACCAACCAAGGCACACCACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS GCA 90 bp | CATCTCAGTCCAAAGCGAGAGCTTTGTGTGAAGCTGTCAGTCGGCTaGAGTTTCCTGATGAAAGCCGTTTCTGAGAGGTTCATCTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: HLSPKRELCVKLSVG*SFLMKAVSERFISL Trigger: GAGGGAGATGAACCTCTCAGAAACGGCTTTCATCAGGAAACTGCAGCCGACTGACAGCTTCACACAAAGCTCTCGCTTTGGACTGAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS-3UTR CAA 90 bp | GATGGAACCCACACCGCTGTAAGGAAACCTTCACCTCTGCTCTGTAAAGAAGTCAGTCCTGGGGAAAGGTaGGGTAGACAGGAAAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: DGTHTAVRKPSPLLCKEVSPGER*GRQESP Trigger: TGGACTTTCCTGTCTACCCAACCTTTCCCCAGGACT...GACTTCTTTACAGAGCAGAGGTGAAGGTTTCCTTACAGCGGTGTGGGTTCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS-3UTR CAA 90 bp | ACTTTTGCATGTTGCTCAGGACCATACCCTGAGCCAAGCAACTTCCATCTTCAGTCCCTGTCTTCTCAATaGCAGGCAGAGGCTCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: TFACCSGPYPEPSNFHLQSLSSQ*QAEALC Trigger: ACACAGAGCCTCTGCCTGCAATTGAGAAGACAGGGA...CTGAAGATGGAAGTTGCTTGGCTCAGGGTATGGTCCTGAGCAACATGCAAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS-3UTR CAA 90 bp | CCTAGTATTATTACATCAGGAGATGGACTTTTGCATGTTGCTCAGGACCATACCTCCCTGTCTTCTCAATaGCAGGCAGAGGCTCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: PSIITSGDGLLHVAQDHTSLSSQ*QAEALC Trigger: ACACAGAGCCTCTGCCTGCAATTGAGAAGACAGGGA...GGTATGGTCCTGAGCAACATGCAAAAGTCCATCTCCTGATGTAATAATACTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS CAA 90 bp | GCTGGGGTTACAGGTGCGCGCTCCAGGAGGCAGACTGCGGCAGGATaGCCCCGGAAAGCTGTCGCAGTGAACGCATCTGCTATGAAGATT | + |
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Preference number: 6 (lower is better) Translates to: AGVTGARSRRQTAAG*PRKAVAVNASAMKI Trigger: AATCTTCATAGCAGATGCGTTCACTGCGACAGCTTTCCGGGGCAATCCTGCCGCAGTCTGCCTCCTGGAGCGCGCACCTGTAACCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219045.2 ENSMUST00000219687.2 |
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| CDS CCA 72 bp | GTATTTTGTGAAACAGCACAGCCGCAGAGGCCAGTGTaGCGTGGCCGCACAAGGGGACTTCACTCACTGGCG | + |
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Preference number: 6 (lower is better) Translates to: VFCETAQPQRPV*RGRTRGLHSLA Trigger: CGCCAGTGAGTGAAGTCCCCTTGTGCGGCCACGCCACACTGGCCTCTGCGGCTGTGCTGTTTCACAAAATAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS CAA 90 bp | GCGTCTTCCTCCAATGTGCGCTCCAGGAGGCAGACTGCGGCAGGATaGCCCCGGAAAGCTGTCGCAGTGAACGCATCTGCTATGAAGATT | + |
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Preference number: 6 (lower is better) Translates to: ASSSNVRSRRQTAAG*PRKAVAVNASAMKI Trigger: AATCTTCATAGCAGATGCGTTCACTGCGACAGCTTTCCGGGGCAATCCTGCCGCAGTCTGCCTCCTGGAGCGCACATTGGAGGAAGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS TCA 72 bp | GCCGTTTCTGAGAGGTTCATCTCCCTCGCAATTTGCTaGTGGGCGTCTTCCTCCAATGTGCGCTCCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: AVSERFISLAIC*WASSSNVRSRR Trigger: CCTCCTGGAGCGCACATTGGAGGAAGACGCCCATCAGCAAATTGCGAGGGAGATGAACCTCTCAGAAACGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS GCA 72 bp | TTTTCCTCGCTGGCTTTGTCTGAGGGCTCCCTGCCCTaGTCGGAGCCCGCTTCACTTCCAGCTTTAGAGATA | + |
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Preference number: 6 (lower is better) Translates to: FSSLALSEGSLP*SEPASLPALEI Trigger: TATCTCTAAAGCTGGAAGTGAAGCGGGCTCCGAGCAGGGCAGGGAGCCCTCAGACAAAGCCAGCGAGGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219687.2 |
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| CDS CCA 72 bp | CAGTGTGGCGTGGCCGCACAAGGGGACTTCACTCACTaGCGTAAACCATCTCAGTCCAAAGCGAGAGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: QCGVAAQGDFTH*RKPSQSKARAL Trigger: CAAAGCTCTCGCTTTGGACTGAGATGGTTTACGCCAGTGAGTGAAGTCCCCTTGTGCGGCCACGCCACACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS TCA 72 bp | GTCAGTCGGCTGCAGTTTCCTGATGAAAGCCGTTTCTaGGAGGTTCATCTCCCTCGCAATTTGCTGATGGGC | + |
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Preference number: 6 (lower is better) Translates to: VSRLQFPDESRF*EVHLPRNLLMG Trigger: GCCCATCAGCAAATTGCGAGGGAGATGAACCTCTCAGAAACGGCTTTCATCAGGAAACTGCAGCCGACTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS CAA 90 bp | GACTTCACTCACTGGCGTAAACCATCTCAGTCCAAAGCGAGAGCTTaGTGTGAAGCTGTCAGTCGGCTGCAGTTTCCTGATGAAAGCCGT | + |
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Preference number: 6 (lower is better) Translates to: DFTHWRKPSQSKARA*CEAVSRLQFPDESR Trigger: ACGGCTTTCATCAGGAAACTGCAGCCGACTGACAGCTTCACACAAAGCTCTCGCTTTGGACTGAGATGGTTTACGCCAGTGAGTGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS GCA 72 bp | CCAAAGCGAGAGCTTTGTGTGAAGCTGTCAGTCGGCTaGAGTTTCCTGATGAAAGCCGTTTCTGAGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: PKRELCVKLSVG*SFLMKAVSERF Trigger: GAACCTCTCAGAAACGGCTTTCATCAGGAAACTGCAGCCGACTGACAGCTTCACACAAAGCTCTCGCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS CAA 72 bp | CACTGGCGTAAACCATCTCAGTCCAAAGCGAGAGCTTaGTGTGAAGCTGTCAGTCGGCTGCAGTTTCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: HWRKPSQSKARA*CEAVSRLQFPD Trigger: ATCAGGAAACTGCAGCCGACTGACAGCTTCACACAAAGCTCTCGCTTTGGACTGAGATGGTTTACGCCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 |
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| CDS TCA 72 bp | CTTCTGCTCTTCTGGCCTTTAGCTCCCCGCTCATTGTaGCAAAGGTCAGGGTGCTGTTCCTGTTCTGTATTT | + |
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Preference number: 6 (lower is better) Translates to: LLLFWPLAPRSL*QRSGCCSCSVF Trigger: AAATACAGAACAGGAACAGCACCCTGACCTTTGTCACAATGAGCGGGGAGCTAAAGGCCAGAAGAGCAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178684.3 |
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| CDS CCA 72 bp | AGGAGTTTTCTGGTATCTGTAGAGTACCGGATGTCCTaGACCAGGGTGTCACCTATGGCTGCCTTTATCAAG | + |
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Preference number: 6 (lower is better) Translates to: RSFLVSVEYRMS*TRVSPMAAFIK Trigger: CTTGATAAAGGCAGCCATAGGTGACACCCTGGTCCAGGACATCCGGTACTCTACAGATACCAGAAAACTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 ENSMUST00000219829.2 |
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| CDS CCA 72 bp | CAAGTCTTCAACTTCATGGAAGTCCTGGGGAAAGGTTaGGTAGACAGGAAAGTCCAGGACTATCCCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: QVFNFMEVLGKG*VDRKVQDYPIF Trigger: GAAGATGGGATAGTCCTGGACTTTCCTGTCTACCCAACCTTTCCCCAGGACTTCCATGAAGTTGAAGACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020266.15 ENSMUST00000178684.3 ENSMUST00000219829.2 |
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