Pregenerated sensors for PAXBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022974Ensembl transcript IDs: ENSMUST00000023698.12, ENSMUST00000118522.8, ENSMUST00000145136.2
Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGACAGGCCTTCCAGGTGATCTGCCATCTGACCGGTTTGCTCTCTaGCTTGCCTACGGCGAGTCCTCCTGGCTTCCCGCTCTGCAATCC | + |
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Preference number: 1 (lower is better) Translates to: WTGLPGDLPSDRFAL*LAYGESSWLPALQS Trigger: GGATTGCAGAGCGGGAAGCCAGGAGGACTCGCCGTAGGCAAGCCAGAGAGCAAACCGGTCAGATGGCAGATCACCTGGAAGGCCTGTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR GCA 90 bp | TGTAGACGTCTCTTCATCATCACTGGACAGGCCTTCCAGGTGATCTaGCATCTGACCGGTTTGCTCTCTGGCTTGCCTACGGCGAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: CRRLFIITGQAFQVI*HLTGLLSGLPTASP Trigger: AGGACTCGCCGTAGGCAAGCCAGAGAGCAAACCGGTCAGATGGCAGATCACCTGGAAGGCCTGTCCAGTGATGATGAAGAGACGTCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR GCA 90 bp | CCTACGGCGAGTCCTCCTGGCTTCCCGCTCTGCAATCCGACGTTTTaGATGTTCTTGATAAAGTGCCCGATCACGTCCAAAGGAATCAAG | + |
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Preference number: 1 (lower is better) Translates to: PTASPPGFPLCNPTF*MFLIKCPITSKGIK Trigger: CTTGATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAGCGGGAAGCCAGGAGGACTCGCCGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR TCA 90 bp | TCAAAGTCACGGCATTTTGCCTCAAGAGGAGTCCAGGTGAGAAGCTaGAGTCTGATTAGGGGGTTGAACAGTTTGGGCAGACAAAGACCA | + |
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Preference number: 1 (lower is better) Translates to: SKSRHFASRGVQVRS*SLIRGLNSLGRQRP Trigger: TGGTCTTTGTCTGCCCAAACTGTTCAACCCCCTAATCAGACTTCAGCTTCTCACCTGGACTCCTCTTGAGGCAAAATGCCGTGACTTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR GCA 90 bp | TTCAAAATTCGATCTCCTGGCTTCCCGCTCTGCAATCCGACGTTTTaGATGTTCTTGATAAAGTGCCCGATCACGTCCAAAGGAATCAAG | + |
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Preference number: 1 (lower is better) Translates to: FKIRSPGFPLCNPTF*MFLIKCPITSKGIK Trigger: CTTGATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAGCGGGAAGCCAGGAGATCGAATTTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145136.2 |
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| 3UTR GCA 90 bp | ACTTTGCTAGACTCTTTCAAAATTCGATCTCCTGGCTTCCCGCTCTaGAATCCGACGTTTTGCATGTTCTTGATAAAGTGCCCGATCACG | + |
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Preference number: 1 (lower is better) Translates to: TLLDSFKIRSPGFPL*NPTFCMFLIKCPIT Trigger: CGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAGCGGGAAGCCAGGAGATCGAATTTTGAAAGAGTCTAGCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145136.2 |
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| 3UTR GCA 90 bp | TTTTCCTTCAATCAGAGACTTGACTTCCTTCACATTGTGGTCACTTaGAACAGATATAGCGTGATCCAAAGCCCGAACGCTTGCAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: FSFNQRLDFLHIVVT*NRYSVIQSPNACKK Trigger: CTTCTTGCAAGCGTTCGGGCTTTGGATCACGCTATATCTGTTGCAAGTGACCACAATGTGAAGGAAGTCAAGTCTCTGATTGAAGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR TCA 90 bp | GAAACATTACAGAATACCATGGATAGTAAATTGCCTGGGTGTGTCTaGTCAGCAAGGCATGTTCTTTATTGCATATATAACTCACATATG | + |
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Preference number: 1 (lower is better) Translates to: ETLQNTMDSKLPGCV*SARHVLYCIYNSHM Trigger: CATATGTGAGTTATATATGCAATAAAGAACATGCCTTGCTGATCAGACACACCCAGGCAATTTACTATCCATGGTATTCTGTAATGTTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
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| 3UTR CAA 90 bp | ATCATCACTGGACAGGCCTTCCAGGTGATCTGCCATCTGACCGGTTaGCTCTCTGGCTTGCCTACGGCGAGTCCTCCTGGCTTCCCGCTC | + |
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Preference number: 2 (lower is better) Translates to: IITGQAFQVICHLTG*LSGLPTASPPGFPL Trigger: GAGCGGGAAGCCAGGAGGACTCGCCGTAGGCAAGCCAGAGAGCAAACCGGTCAGATGGCAGATCACCTGGAAGGCCTGTCCAGTGATGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR CAA 90 bp | GCCTACGGCGAGTCCTCCTGGCTTCCCGCTCTGCAATCCGACGTTTaGCATGTTCTTGATAAAGTGCCCGATCACGTCCAAAGGAATCAA | + |
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Preference number: 2 (lower is better) Translates to: AYGESSWLPALQSDV*HVLDKVPDHVQRNQ Trigger: TTGATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAGCGGGAAGCCAGGAGGACTCGCCGTAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR CAA 90 bp | AGTCCTCCTGGCTTCCCGCTCTGCAATCCGACGTTTTGCATGTTCTaGATAAAGTGCCCGATCACGTCCAAAGGAATCAAGATTTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: SPPGFPLCNPTFCMF*IKCPITSKGIKIWC Trigger: GCACCAAATCTTGATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAGCGGGAAGCCAGGAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR CAA 90 bp | CGATCTCCTGGCTTCCCGCTCTGCAATCCGACGTTTTGCATGTTCTaGATAAAGTGCCCGATCACGTCCAAAGGAATCAAGATTTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: RSPGFPLCNPTFCMF*IKCPITSKGIKIWC Trigger: GCACCAAATCTTGATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAGCGGGAAGCCAGGAGATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145136.2 |
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| 3UTR-3UTR GCA 90 bp | GAACAGCAGAGATTCAAACCACAGCATGGTTTCAAAGTCACGGCATTTTGCCTCCCTGGCTTCCCGCTCTaGAATCCGACGTTTTGCATG | + |
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Preference number: 2 (lower is better) Translates to: EQQRFKPQHGFKVTAFCLPGFPL*NPTFCM Trigger: CATGCAAAACGTCGGATTGCAGAGCGGGAAGCCAGG...GAGGCAAAATGCCGTGACTTTGAAACCATGCTGTGGTTTGAATCTCTGCTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR CAA 90 bp | TTTCAAAATTCGATCTCCTGGCTTCCCGCTCTGCAATCCGACGTTTaGCATGTTCTTGATAAAGTGCCCGATCACGTCCAAAGGAATCAA | + |
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Preference number: 2 (lower is better) Translates to: FQNSISWLPALQSDV*HVLDKVPDHVQRNQ Trigger: TTGATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAGCGGGAAGCCAGGAGATCGAATTTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145136.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGTGATTCCAACCATCCTTGAAGTCTGTGTTGTAGAAAAGGGATCCCACATGAAAGTCACGGCATTTTaGCTCAAGAGGAGTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: IVIPTILEVCVVEKGSHMKVTAF*LKRSPG Trigger: ACCTGGACTCCTCTTGAGGCAAAATGCCGTGACTTT...CATGTGGGATCCCTTTTCTACAACACAGACTTCAAGGATGGTTGGAATCACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR-3UTR GCA 90 bp | GAAAGCATCAACCTTAAAACAAGTTTCTCTGAGTATTTACAGTGTGGTAGAAACGTGAAGGTCATCACCTaGCAGCCCTTCAGCTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: ESINLKTSFSEYLQCGRNVKVIT*QPFSCC Trigger: GCAGCAGCTGAAGGGCTGGCAGGTGATGACCTTCAC...GTTTCTACCACACTGTAAATACTCAGAGAAACTTGTTTTAAGGTTGATGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTCAAAAACTTTGCTAGACTCTTTCAAAATTCGATCTCCTGGCTTCCCGCTCATGTTCTTGATAAAGTaGCCGATCACGTCCAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SSKTLLDSFKIRSPGFPLMFLIK*PITSKG Trigger: TCCTTTGGACGTGATCGGGCACTTTATCAAGAACAT...GAGCGGGAAGCCAGGAGATCGAATTTTGAAAGAGTCTAGCAAAGTTTTTGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145136.2 |
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| 3UTR-3UTR GCA 90 bp | TATAAGCATCCTTATAGGACATGTAGTATTTTGAACGCCATGCTTCAAACTGTGATGTTCTTGATAAAGTaGCCGATCACGTCCAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: YKHPYRTCSILNAMLQTVMFLIK*PITSKG Trigger: TCCTTTGGACGTGATCGGGCACTTTATCAAGAACAT...CACAGTTTGAAGCATGGCGTTCAAAATACTACATGTCCTATAAGGATGCTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000145136.2 |
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| 3UTR-3UTR GCA 90 bp | TATACAAAATGTACACACTGGAAATGGCAGCAAAGCAAACACTTTTTGGTCGCATGCAATCCGACGTTTTaGATGTTCTTGATAAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: YTKCTHWKWQQSKHFLVACNPTF*MFLIKC Trigger: GCACTTTATCAAGAACATGCAAAACGTCGGATTGCA...TGCGACCAAAAAGTGTTTGCTTTGCTGCCATTTCCAGTGTGTACATTTTGTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR-3UTR TCA 90 bp | TATACAAAATGTACACACTGGAAATGGCAGCAAAGCAAACACTTTTTGGTCGCACTCCTAGAAATAATCTaGGTTCCTTTCATTCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: YTKCTHWKWQQSKHFLVALLEII*VPFILK Trigger: CTTGAGAATGAAAGGAACTCAGATTATTTCTAGGAG...TGCGACCAAAAAGTGTTTGCTTTGCTGCCATTTCCAGTGTGTACATTTTGTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
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| 3UTR CCA 72 bp | CTTCCAGGTGATCTGCCATCTGACCGGTTTGCTCTCTaGCTTGCCTACGGCGAGTCCTCCTGGCTTCCCGCT | + |
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Preference number: 3 (lower is better) Translates to: LPGDLPSDRFAL*LAYGESSWLPA Trigger: AGCGGGAAGCCAGGAGGACTCGCCGTAGGCAAGCCAGAGAGCAAACCGGTCAGATGGCAGATCACCTGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR GCA 72 bp | CTCTTCATCATCACTGGACAGGCCTTCCAGGTGATCTaGCATCTGACCGGTTTGCTCTCTGGCTTGCCTACG | + |
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Preference number: 3 (lower is better) Translates to: LFIITGQAFQVI*HLTGLLSGLPT Trigger: CGTAGGCAAGCCAGAGAGCAAACCGGTCAGATGGCAGATCACCTGGAAGGCCTGTCCAGTGATGATGAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR CCA 72 bp | GAAAGGTCAGTCAGCCCAGGCCATGCAGTTAGTTTGTaGCTCATCCTACCCCACACTACTGCATATGTCGCC | + |
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Preference number: 3 (lower is better) Translates to: ERSVSPGHAVSL*LILPHTTAYVA Trigger: GGCGACATATGCAGTAGTGTGGGGTAGGATGAGCCACAAACTAACTGCATGGCCTGGGCTGACTGACCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
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| 3UTR GCA 72 bp | AGTCCTCCTGGCTTCCCGCTCTGCAATCCGACGTTTTaGATGTTCTTGATAAAGTGCCCGATCACGTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: SPPGFPLCNPTF*MFLIKCPITSK Trigger: TTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAGCGGGAAGCCAGGAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR GCA 72 bp | CGATCTCCTGGCTTCCCGCTCTGCAATCCGACGTTTTaGATGTTCTTGATAAAGTGCCCGATCACGTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: RSPGFPLCNPTF*MFLIKCPITSK Trigger: TTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAGCGGGAAGCCAGGAGATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145136.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCTTCACATTGTGGTCACTTGCAACAGATATAGCGTGATCCAAAGCCCGAACCAAAGTCACGGCATTTaGCCTCAAGAGGAGTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: FLHIVVTCNRYSVIQSPNQSHGI*PQEESR Trigger: CCTGGACTCCTCTTGAGGCAAAATGCCGTGACTTTG...GTTCGGGCTTTGGATCACGCTATATCTGTTGCAAGTGACCACAATGTGAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR-3UTR CAA 90 bp | CAAACCACAGCATGGTTTCAAAGTCACGGCATTTTGCCTCAAGAGGAGTCCAGGACGTTTTGCATGTTCTaGATAAAGTGCCCGATCACG | + |
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Preference number: 3 (lower is better) Translates to: QTTAWFQSHGILPQEESRTFCMF*IKCPIT Trigger: CGTGATCGGGCACTTTATCAAGAACATGCAAAACGT...CCTGGACTCCTCTTGAGGCAAAATGCCGTGACTTTGAAACCATGCTGTGGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR GCA 72 bp | CTCTGCAATCCGACGTTTTGCATGTTCTTGATAAAGTaGCCGATCACGTCCAAAGGAATCAAGATTTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: LCNPTFCMFLIK*PITSKGIKIWC Trigger: GCACCAAATCTTGATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000145136.2 |
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| 3UTR GCA 72 bp | AATCAGAGACTTGACTTCCTTCACATTGTGGTCACTTaGAACAGATATAGCGTGATCCAAAGCCCGAACGCT | + |
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Preference number: 3 (lower is better) Translates to: NQRLDFLHIVVT*NRYSVIQSPNA Trigger: AGCGTTCGGGCTTTGGATCACGCTATATCTGTTGCAAGTGACCACAATGTGAAGGAAGTCAAGTCTCTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR GCA 72 bp | GACTCTTTCAAAATTCGATCTCCTGGCTTCCCGCTCTaGAATCCGACGTTTTGCATGTTCTTGATAAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: DSFKIRSPGFPL*NPTFCMFLIKC Trigger: GCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAGCGGGAAGCCAGGAGATCGAATTTTGAAAGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145136.2 |
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| 3UTR-3UTR CAA 90 bp | CAATATAAGCATCCTTATAGGACATGTAGTATTTTGAACGCCATGCTTCAAACTTGCCATCTGACCGGTTaGCTCTCTGGCTTGCCTACG | + |
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Preference number: 3 (lower is better) Translates to: QYKHPYRTCSILNAMLQTCHLTG*LSGLPT Trigger: CGTAGGCAAGCCAGAGAGCAAACCGGTCAGATGGCA...AGTTTGAAGCATGGCGTTCAAAATACTACATGTCCTATAAGGATGCTTATATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR TCA 72 bp | TCCTTCACATTGTGGTCACTTGCAACAGATATAGCGTaGTCCAAAGCCCGAACGCTTGCAAGAAGTTTTACT | + |
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Preference number: 3 (lower is better) Translates to: SFTLWSLATDIA*SKARTLARSFT Trigger: AGTAAAACTTCTTGCAAGCGTTCGGGCTTTGGATCACGCTATATCTGTTGCAAGTGACCACAATGTGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR-3UTR CAA 90 bp | TATACAAAATGTACACACTGGAAATGGCAGCAAAGCAAACACTTTTTGGTCGCAAGGGGGTTGAACAGTTaGGGCAGACAAAGACCAATA | + |
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Preference number: 3 (lower is better) Translates to: YTKCTHWKWQQSKHFLVARGLNS*GRQRPI Trigger: TATTGGTCTTTGTCTGCCCAAACTGTTCAACCCCCT...TGCGACCAAAAAGTGTTTGCTTTGCTGCCATTTCCAGTGTGTACATTTTGTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR CCA 72 bp | GTACACACTGGAAATGGCAGCAAAGCAAACACTTTTTaGTCGCAGATCTATTTTCCTTCAATCAGAGACTTG | + |
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Preference number: 3 (lower is better) Translates to: VHTGNGSKANTF*SQIYFPSIRDL Trigger: CAAGTCTCTGATTGAAGGAAAATAGATCTGCGACCAAAAAGTGTTTGCTTTGCTGCCATTTCCAGTGTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| 3UTR TCA 72 bp | CAGAATACCATGGATAGTAAATTGCCTGGGTGTGTCTaGTCAGCAAGGCATGTTCTTTATTGCATATATAAC | + |
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Preference number: 3 (lower is better) Translates to: QNTMDSKLPGCV*SARHVLYCIYN Trigger: GTTATATATGCAATAAAGAACATGCCTTGCTGATCAGACACACCCAGGCAATTTACTATCCATGGTATTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
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| 3UTR TCA 72 bp | ACCAATATAAGCATCCTTATAGGACATGTAGTATTTTaGACGCCATGCTTCAAACTGTGCTTTAATGCAGTC | + |
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Preference number: 3 (lower is better) Translates to: TNISILIGHVVF*TPCFKLCFNAV Trigger: GACTGCATTAAAGCACAGTTTGAAGCATGGCGTTCAAAATACTACATGTCCTATAAGGATGCTTATATTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000145136.2 |
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| CDS-3UTR GCA 90 bp | GCTGCCTCCAGGGCAGACTCCCAGAAGTCCCACACTCACTCAACGACAAAGTCTCCGAGTCGTTCCGCTTaGGCACGTTCACCCGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: AASRADSQKSHTHSTTKSPSRSA*ARSPAG Trigger: CCCGGCGGGTGAACGTGCGCAAGCGGAACGACTCGG...AGACTTTGTCGTTGAGTGAGTGTGGGACTTCTGGGAGTCTGCCCTGGAGGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
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| 3UTR CAA 72 bp | GGACAGGCCTTCCAGGTGATCTGCCATCTGACCGGTTaGCTCTCTGGCTTGCCTACGGCGAGTCCTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GQAFQVICHLTG*LSGLPTASPPG Trigger: GCCAGGAGGACTCGCCGTAGGCAAGCCAGAGAGCAAACCGGTCAGATGGCAGATCACCTGGAAGGCCTGTCC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
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| CDS-3UTR TCA 90 bp | CTACTGCATATGTCGCCTCAGGCTCGTATTAAACCCACAGCTGCCTCCAGGGCACACTGTCGTGAGGCGTaGAGTCGCCCAGCTCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: LLHMSPQARIKPTAASRAHCREA*SRPAPG Trigger: CCCGGGAGCTGGGCGACTTCACGCCTCACGACAGTG...TGCCCTGGAGGCAGCTGTGGGTTTAATACGAGCCTGAGGCGACATATGCAGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
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| CDS-3UTR GCA 90 bp | ATCTATAGCTGGGCAGGGAAGACAATAGTGAGAAAGGTCAGTCAGCCCAGGCCAAACGGTGGCGGCTCCTaGTCCTCATCGCGCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: IYSWAGKTIVRKVSQPRPNGGGS*SSSRSR Trigger: GCGGGAGCGCGATGAGGAGCAGGAGCCGCCACCGTT...TGGCCTGGGCTGACTGACCTTTCTCACTATTGTCTTCCCTGCCCAGCTATAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
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| CDS-3UTR CCA 90 bp | AATAGTGAGAAAGGTCAGTCAGCCCAGGCCATGCAGTTAGTTTGTGGCTCATCCCGGGGGCAGCAACGGTaGCGGCTCCTGCTCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: NSEKGQSAQAMQLVCGSSRGQQR*RLLLLI Trigger: GATGAGGAGCAGGAGCCGCCACCGTTGCTGCCCCCG...GGATGAGCCACAAACTAACTGCATGGCCTGGGCTGACTGACCTTTCTCACTATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
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| CDS-3UTR GCA 90 bp | ATCTATAGCTGGGCAGGGAAGACAATAGTGAGAAAGGTCAGTCAGCCCAGGCCATCTCGCGAGGCCTCTTaGGCGGCTTCAGCCCATTGC | + |
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Preference number: 4 (lower is better) Translates to: IYSWAGKTIVRKVSQPRPSREAS*AASAHC Trigger: GCAATGGGCTGAAGCCGCGCAAGAGGCCTCGCGAGA...TGGCCTGGGCTGACTGACCTTTCTCACTATTGTCTTCCCTGCCCAGCTATAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
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| CDS-3UTR GCA 90 bp | ATCTATAGCTGGGCAGGGAAGACAATAGTGAGAAAGGTCAGTCAGCCCAGGCCAGGACGAGGCGGCCTTTaGCAGGCTCACTGTCGTGAG | + |
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Preference number: 4 (lower is better) Translates to: IYSWAGKTIVRKVSQPRPGRGGL*QAHCRE Trigger: CTCACGACAGTGAGCCTGGCAAAGGCCGCCTCGTCC...TGGCCTGGGCTGACTGACCTTTCTCACTATTGTCTTCCCTGCCCAGCTATAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
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| CDS-3UTR GCA 90 bp | GCTGCCTCCAGGGCAGACTCCCAGAAGTCCCACACTCACTCAACGACAAAGTCTTTTCTAATCTGCTCCTaGTCCCAGCGGCTGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: AASRADSQKSHTHSTTKSFLICS*SQRLSS Trigger: GGAGCTCAGCCGCTGGGAGCAGGAGCAGATTAGAAA...AGACTTTGTCGTTGAGTGAGTGTGGGACTTCTGGGAGTCTGCCCTGGAGGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
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| CDS-3UTR GCA 90 bp | CTACTGCATATGTCGCCTCAGGCTCGTATTAAACCCACAGCTGCCTCCAGGGCACTGAGCTCCTCGTCTTaGTCTCCAGTTACTAACGCG | + |
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Preference number: 4 (lower is better) Translates to: LLHMSPQARIKPTAASRALSSSS*SPVTNA Trigger: CGCGTTAGTAACTGGAGAGCAAGACGAGGAGCTCAG...TGCCCTGGAGGCAGCTGTGGGTTTAATACGAGCCTGAGGCGACATATGCAGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
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| CDS-3UTR CCA 90 bp | AATAGTGAGAAAGGTCAGTCAGCCCAGGCCATGCAGTTAGTTTGTGGCTCATCCTACGGCGAGTCCTCCTaGCTTCCCGCTCTGCAATCC | + |
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Preference number: 4 (lower is better) Translates to: NSEKGQSAQAMQLVCGSSYGESS*LPALQS Trigger: GGATTGCAGAGCGGGAAGCCAGGAGGACTCGCCGTA...GGATGAGCCACAAACTAACTGCATGGCCTGGGCTGACTGACCTTTCTCACTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
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| CDS-3UTR TCA 90 bp | TTGCATGTTCTTGATAAAGTGCCCGATCACGTCCAAAGGAATCAAGATTTGGTGCACTGTCGTGAGGCGTaGAGTCGCCCAGCTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHVLDKVPDHVQRNQDLVHCREA*SRPAPG Trigger: CCCGGGAGCTGGGCGACTTCACGCCTCACGACAGTG...CACCAAATCTTGATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR GCA 90 bp | GCTGCCTCCAGGGCAGACTCCCAGAAGTCCCACACTCACTCAACGACAAAGTCTCTGGTCACTGTCAGCTaGTGTGTTGAGTTCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AASRADSQKSHTHSTTKSLVTVS*CVEFCL Trigger: AAGACAGAACTCAACACAGCAGCTGACAGTGACCAG...AGACTTTGTCGTTGAGTGAGTGTGGGACTTCTGGGAGTCTGCCCTGGAGGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR GCA 90 bp | TGCAATCCGACGTTTTGCATGTTCTTGATAAAGTGCCCGATCACGTCCAAAGGAGGACGAGGCGGCCTTTaGCAGGCTCACTGTCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CNPTFCMFLIKCPITSKGGRGGL*QAHCRE Trigger: CTCACGACAGTGAGCCTGGCAAAGGCCGCCTCGTCC...TCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CCA 90 bp | AATAGTGAGAAAGGTCAGTCAGCCCAGGCCATGCAGTTAGTTTGTGGCTCATCCTCTTCCTCCTCGTCTTaGAAGCTGAGCAGGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSEKGQSAQAMQLVCGSSSSSSS*KLSRLA Trigger: GGCCAGCCTGCTCAGCTTCCAAGACGAGGAGGAAGA...GGATGAGCCACAAACTAACTGCATGGCCTGGGCTGACTGACCTTTCTCACTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCAGGGCAGACTCCCAGAAGTCCCACACTCACTCAACGACAAAGTCTTTATGAAAGCTGCATCTaGGATTTCTCCTGGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPPGQTPRSPTLTQRQSLYESCI*DFSWAE Trigger: CTCCGCCCAGGAGAAATCCCAGATGCAGCTTTCATA...AAGACTTTGTCGTTGAGTGAGTGTGGGACTTCTGGGAGTCTGCCCTGGAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CCA 90 bp | ATCTATAGCTGGGCAGGGAAGACAATAGTGAGAAAGGTCAGTCAGCCCAGGCCACCTTCTCCACAATGGTaGGCAGCAGAGCAACGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IYSWAGKTIVRKVSQPRPPSPQW*AAEQRQ Trigger: CTGACGTTGCTCTGCTGCCCACCATTGTGGAGAAGG...TGGCCTGGGCTGACTGACCTTTCTCACTATTGTCTTCCCTGCCCAGCTATAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| 3UTR CAA 72 bp | GAGTCCTCCTGGCTTCCCGCTCTGCAATCCGACGTTTaGCATGTTCTTGATAAAGTGCCCGATCACGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ESSWLPALQSDV*HVLDKVPDHVQ Trigger: TTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAGCGGGAAGCCAGGAGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR TCA 90 bp | ATCTATAGCTGGGCAGGGAAGACAATAGTGAGAAAGGTCAGTCAGCCCAGGCCATCAGCTTGGGGAGAATaGCCTTCTCCACAATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IYSWAGKTIVRKVSQPRPSAWGE*PSPQWW Trigger: CCACCATTGTGGAGAAGGTCATTCTCCCCAAGCTGA...TGGCCTGGGCTGACTGACCTTTCTCACTATTGTCTTCCCTGCCCAGCTATAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCCTCCAGGGCAGACTCCCAGAAGTCCCACACTCACTCAACGACAAAGTCTGGACATGTAGTATTTTaGACGCCATGCTTCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: AASRADSQKSHTHSTTKSGHVVF*TPCFKL Trigger: CAGTTTGAAGCATGGCGTTCAAAATACTACATGTCC...AGACTTTGTCGTTGAGTGAGTGTGGGACTTCTGGGAGTCTGCCCTGGAGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR GCA 90 bp | ATCTATAGCTGGGCAGGGAAGACAATAGTGAGAAAGGTCAGTCAGCCCAGGCCACGGTATGCCATAGGATaGACCGTAAGGCATTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IYSWAGKTIVRKVSQPRPRYAIG*TVRHCL Trigger: CAGACAATGCCTTACGGTGCATCCTATGGCATACCG...TGGCCTGGGCTGACTGACCTTTCTCACTATTGTCTTCCCTGCCCAGCTATAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGCAAAGCAAACACTTTTTGGTCGCAGATCTATTTTCCTTCAATCAGAGAGGCGCCCCCGGCCTTaGGCTTCTCCTCCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQTLFGRRSIFLQSERRPRP*ASPPPS Trigger: AGAAGGAGGAGGAGAAGCCCAAGGCCGGGGGCGCCT...CTCTGATTGAAGGAAAATAGATCTGCGACCAAAAAGTGTTTGCTTTGCTGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| 3UTR CAA 72 bp | TCGATCTCCTGGCTTCCCGCTCTGCAATCCGACGTTTaGCATGTTCTTGATAAAGTGCCCGATCACGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SISWLPALQSDV*HVLDKVPDHVQ Trigger: TTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAGCGGGAAGCCAGGAGATCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145136.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCTCCAGGGCAGACTCCCAGAAGTCCCACACTCACTCAACGACAAAGTCTTCGCTGTTTGTACAGCTaGTGTATTGCTGATTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPGQTPRSPTLTQRQSLRCLYS*CIADSS Trigger: ACTTGAATCAGCAATACATCAGCTGTACAAACAGCG...AAGACTTTGTCGTTGAGTGAGTGTGGGACTTCTGGGAGTCTGCCCTGGAGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR TCA 90 bp | CTACTGCATATGTCGCCTCAGGCTCGTATTAAACCCACAGCTGCCTCCAGGGCATTTTATTGTCTGCATTaGCTACTGAGGGGTAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLHMSPQARIKPTAASRAFYCLH*LLRGSH Trigger: ATGGCTACCCCTCAGTAGTCAATGCAGACAATAAAA...TGCCCTGGAGGCAGCTGTGGGTTTAATACGAGCCTGAGGCGACATATGCAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR GCA 90 bp | CTACTGCATATGTCGCCTCAGGCTCGTATTAAACCCACAGCTGCCTCCAGGGCATTGTCGCTTCTTTCTTaGAGCATGTATGAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLHMSPQARIKPTAASRALSLLS*SMYESC Trigger: GCAGCTTTCATACATGCTGCAAGAAAGAAGCGACAA...TGCCCTGGAGGCAGCTGTGGGTTTAATACGAGCCTGAGGCGACATATGCAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR GCA 90 bp | AATAGTGAGAAAGGTCAGTCAGCCCAGGCCATGCAGTTAGTTTGTGGCTCATCCATTCCTTTTCTAATCTaGTCCTGCTCCCAGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSEKGQSAQAMQLVCGSSIPFLI*SCSQRL Trigger: CAGCCGCTGGGAGCAGGAGCAGATTAGAAAAGGAAT...GGATGAGCCACAAACTAACTGCATGGCCTGGGCTGACTGACCTTTCTCACTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR GCA 90 bp | ATCTATAGCTGGGCAGGGAAGACAATAGTGAGAAAGGTCAGTCAGCCCAGGCCAGAGTCCACTCGGCTTTaGAGATGTTTTTCATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IYSWAGKTIVRKVSQPRPESTRL*RCFSCC Trigger: GCAGCATGAAAAACATCTGCAAAGCCGAGTGGACTC...TGGCCTGGGCTGACTGACCTTTCTCACTATTGTCTTCCCTGCCCAGCTATAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR GCA 90 bp | CTACTGCATATGTCGCCTCAGGCTCGTATTAAACCCACAGCTGCCTCCAGGGCACAAAGCCCGAACGCTTaGAAGAAGTTTTACTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLHMSPQARIKPTAASRAQSPNA*KKFYYL Trigger: CAGATAGTAAAACTTCTTGCAAGCGTTCGGGCTTTG...TGCCCTGGAGGCAGCTGTGGGTTTAATACGAGCCTGAGGCGACATATGCAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CCA 90 bp | GATCTATTTTCCTTCAATCAGAGACTTGACTTCCTTCACATTGTGGTCACTTGCGGGAAGACAGAGCATTaGAGAAGGCGCCCCCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLFSFNQRLDFLHIVVTCGKTEH*RRRPRP Trigger: AGGCCGGGGGCGCCTTCTCCAATGCTCTGTCTTCCC...GCAAGTGACCACAATGTGAAGGAAGTCAAGTCTCTGATTGAAGGAAAATAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCAATCCGACGTTTTGCATGTTCTTGATAAAGTGCCCGATCACGTCCAATCATCTTGTCGTCTTTaGACAAGGCGGGAAGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ALQSDVLHVLDKVPDHVQSSCRL*TRREAR Trigger: GCGAGCTTCCCGCCTTGTCCAAAGACGACAAGATGA...TTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000145136.2 |
||
| 3UTR CAA 72 bp | GGCTTCCCGCTCTGCAATCCGACGTTTTGCATGTTCTaGATAAAGTGCCCGATCACGTCCAAAGGAATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GFPLCNPTFCMF*IKCPITSKGIK Trigger: CTTGATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAGCGGGAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000145136.2 |
||
| CDS-3UTR GCA 90 bp | AATCCGACGTTTTGCATGTTCTTGATAAAGTGCCCGATCACGTCCAAAGGAATCTTTCTAATCTGCTCCTaGTCCCAGCGGCTGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NPTFCMFLIKCPITSKGIFLICS*SQRLSS Trigger: GGAGCTCAGCCGCTGGGAGCAGGAGCAGATTAGAAA...GATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGCTATCACTGTCAGCTTGGGGAGAATGACCTTCTCCACAATGGTGGGCACACATTCACTTCACTaGGCTGACTTGCTTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: VSAITVSLGRMTFSTMVGTHSLH*ADLLEP Trigger: AGGTTCAAGCAAGTCAGCCCAGTGAAGTGAATGTGT...GCCCACCATTGTGGAGAAGGTCATTCTCCCCAAGCTGACAGTGATAGCTGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CCA 90 bp | ATCTATAGCTGGGCAGGGAAGACAATAGTGAGAAAGGTCAGTCAGCCCAGGCCAACACATTCACTTCACTaGGCTGACTTGCTTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: IYSWAGKTIVRKVSQPRPTHSLH*ADLLEP Trigger: AGGTTCAAGCAAGTCAGCCCAGTGAAGTGAATGTGT...TGGCCTGGGCTGACTGACCTTTCTCACTATTGTCTTCCCTGCCCAGCTATAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR TCA 90 bp | CTACTGCATATGTCGCCTCAGGCTCGTATTAAACCCACAGCTGCCTCCAGGGCAAAAATGCCATACCACTaGAGAAAATTTCCCAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLHMSPQARIKPTAASRAKMPYH*RKFPNS Trigger: GCTATTGGGAAATTTTCTTCAGTGGTATGGCATTTT...TGCCCTGGAGGCAGCTGTGGGTTTAATACGAGCCTGAGGCGACATATGCAGTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR TCA 90 bp | ATCTATAGCTGGGCAGGGAAGACAATAGTGAGAAAGGTCAGTCAGCCCAGGCCACTTCAATCAGAGACTTaGCTTCCTTCACATTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IYSWAGKTIVRKVSQPRPLQSET*LPSHCG Trigger: ACCACAATGTGAAGGAAGTCAAGTCTCTGATTGAAG...TGGCCTGGGCTGACTGACCTTTCTCACTATTGTCTTCCCTGCCCAGCTATAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTCACATTGTGGTCACTTGCAACAGATATAGCGTGATCCAAAGCCCGAACCGGTATGCCATAGGATaGACCGTAAGGCATTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLHIVVTCNRYSVIQSPNRYAIG*TVRHCL Trigger: CAGACAATGCCTTACGGTGCATCCTATGGCATACCG...GTTCGGGCTTTGGATCACGCTATATCTGTTGCAAGTGACCACAATGTGAAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CCA 90 bp | ACACTGCAAAATTTCCAGCATGAAAATCCATGGTGGTATAAATATACATGCACAAGGCGCCCCCGGCCTTaGGCTTCTCCTCCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFQHENPWWYKYTCTRRPRP*ASPPPS Trigger: AGAAGGAGGAGGAGAAGCCCAAGGCCGGGGGCGCCT...TGTGCATGTATATTTATACCACCATGGATTTTCATGCTGGAAATTTTGCAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CCA 90 bp | AATAGTGAGAAAGGTCAGTCAGCCCAGGCCATGCAGTTAGTTTGTGGCTCATCCCACTCAAGCAAGTCTTaGACATACCCTCGCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSEKGQSAQAMQLVCGSSHSSKS*TYPRIS Trigger: AGAAATGCGAGGGTATGTCCAAGACTTGCTTGAGTG...GGATGAGCCACAAACTAACTGCATGGCCTGGGCTGACTGACCTTTCTCACTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR GCA 90 bp | CAATATAAGCATCCTTATAGGACATGTAGTATTTTGAACGCCATGCTTCAAACTTCTCGCGAGGCCTCTTaGGCGGCTTCAGCCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: QYKHPYRTCSILNAMLQTSREAS*AASAHC Trigger: GCAATGGGCTGAAGCCGCGCAAGAGGCCTCGCGAGA...AGTTTGAAGCATGGCGTTCAAAATACTACATGTCCTATAAGGATGCTTATATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR GCA 90 bp | TTCATTGTGATTCCAACCATCCTTGAAGTCTGTGTTGTAGAAAAGGGATCCCACCTGAGCTCCTCGTCTTaGTCTCCAGTTACTAACGCG | + |
|
Preference number: 4 (lower is better) Translates to: FIVIPTILEVCVVEKGSHLSSSS*SPVTNA Trigger: CGCGTTAGTAACTGGAGAGCAAGACGAGGAGCTCAG...GTGGGATCCCTTTTCTACAACACAGACTTCAAGGATGGTTGGAATCACAATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR GCA 90 bp | AATAGTGAGAAAGGTCAGTCAGCCCAGGCCATGCAGTTAGTTTGTGGCTCATCCATGTTCTTGATAAAGTaGCCGATCACGTCCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NSEKGQSAQAMQLVCGSSMFLIK*PITSKG Trigger: TCCTTTGGACGTGATCGGGCACTTTATCAAGAACAT...GGATGAGCCACAAACTAACTGCATGGCCTGGGCTGACTGACCTTTCTCACTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR GCA 90 bp | AATAGTGAGAAAGGTCAGTCAGCCCAGGCCATGCAGTTAGTTTGTGGCTCATCCCACATTGTGGTCACTTaGAACAGATATAGCGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: NSEKGQSAQAMQLVCGSSHIVVT*NRYSVI Trigger: GATCACGCTATATCTGTTGCAAGTGACCACAATGTG...GGATGAGCCACAAACTAACTGCATGGCCTGGGCTGACTGACCTTTCTCACTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CCA 90 bp | CTACTGCATATGTCGCCTCAGGCTCGTATTAAACCCACAGCTGCCTCCAGGGCAAAGTTCATTAATCAGTaGCACCTTTTCACTGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LLHMSPQARIKPTAASRAKFINQ*HLFTET Trigger: TGTTTCAGTGAAAAGGTGCCACTGATTAATGAACTT...TGCCCTGGAGGCAGCTGTGGGTTTAATACGAGCCTGAGGCGACATATGCAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CCA 90 bp | ATCTATAGCTGGGCAGGGAAGACAATAGTGAGAAAGGTCAGTCAGCCCAGGCCAATTCAAACCACAGCATaGTTTCAAAGTCACGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: IYSWAGKTIVRKVSQPRPIQTTA*FQSHGI Trigger: AATGCCGTGACTTTGAAACCATGCTGTGGTTTGAAT...TGGCCTGGGCTGACTGACCTTTCTCACTATTGTCTTCCCTGCCCAGCTATAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR TCA 90 bp | AATAGTGAGAAAGGTCAGTCAGCCCAGGCCATGCAGTTAGTTTGTGGCTCATCCGATTCCAACCATCCTTaGAGTCTGTGTTGTAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NSEKGQSAQAMQLVCGSSDSNHP*SLCCRK Trigger: TTTTCTACAACACAGACTTCAAGGATGGTTGGAATC...GGATGAGCCACAAACTAACTGCATGGCCTGGGCTGACTGACCTTTCTCACTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR GCA 90 bp | AACAGATATAGCGTGATCCAAAGCCCGAACGCTTGCAAGAAGTTTTACTATCTGATTCCTTTTCTAATCTaGTCCTGCTCCCAGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NRYSVIQSPNACKKFYYLIPFLI*SCSQRL Trigger: CAGCCGCTGGGAGCAGGAGCAGATTAGAAAAGGAAT...CAGATAGTAAAACTTCTTGCAAGCGTTCGGGCTTTGGATCACGCTATATCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CCA 90 bp | AACAGATATAGCGTGATCCAAAGCCCGAACGCTTGCAAGAAGTTTTACTATCTGTATGAAAGCTGCATCTaGGATTTCTCCTGGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NRYSVIQSPNACKKFYYLYESCI*DFSWAE Trigger: CTCCGCCCAGGAGAAATCCCAGATGCAGCTTTCATA...CAGATAGTAAAACTTCTTGCAAGCGTTCGGGCTTTGGATCACGCTATATCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR TCA 90 bp | AATCCGACGTTTTGCATGTTCTTGATAAAGTGCCCGATCACGTCCAAAGGAATCGTGGCACCTTTTCACTaGAACACTCAAGCAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NPTFCMFLIKCPITSKGIVAPFH*NTQASL Trigger: AAGACTTGCTTGAGTGTTTCAGTGAAAAGGTGCCAC...GATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR GCA 90 bp | TGCAATCCGACGTTTTGCATGTTCTTGATAAAGTGCCCGATCACGTCCAAAGGATTGTCGCTTCTTTCTTaGAGCATGTATGAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CNPTFCMFLIKCPITSKGLSLLS*SMYESC Trigger: GCAGCTTTCATACATGCTGCAAGAAAGAAGCGACAA...TCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CCA 90 bp | CAATATAAGCATCCTTATAGGACATGTAGTATTTTGAACGCCATGCTTCAAACTTCTTCCTCCTCGTCTTaGAAGCTGAGCAGGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QYKHPYRTCSILNAMLQTSSSSS*KLSRLA Trigger: GGCCAGCCTGCTCAGCTTCCAAGACGAGGAGGAAGA...AGTTTGAAGCATGGCGTTCAAAATACTACATGTCCTATAAGGATGCTTATATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CCA 90 bp | AATAGTGAGAAAGGTCAGTCAGCCCAGGCCATGCAGTTAGTTTGTGGCTCATCCCATGCTGCTGTTGATTaGTTTTGTGCAATTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NSEKGQSAQAMQLVCGSSHAAVD*FCAILS Trigger: TGAAAGAATTGCACAAAACCAATCAACAGCAGCATG...GGATGAGCCACAAACTAACTGCATGGCCTGGGCTGACTGACCTTTCTCACTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CCA 90 bp | TATACAAAATGTACACACTGGAAATGGCAGCAAAGCAAACACTTTTTGGTCGCATCATCTTGTCGTCTTTaGACAAGGCGGGAAGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: YTKCTHWKWQQSKHFLVASSCRL*TRREAR Trigger: GCGAGCTTCCCGCCTTGTCCAAAGACGACAAGATGA...TGCGACCAAAAAGTGTTTGCTTTGCTGCCATTTCCAGTGTGTACATTTTGTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS-3UTR GCA 90 bp | GATCTATTTTCCTTCAATCAGAGACTTGACTTCCTTCACATTGTGGTCACTTGCGAGTCCACTCGGCTTTaGAGATGTTTTTCATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DLFSFNQRLDFLHIVVTCESTRL*RCFSCC Trigger: GCAGCATGAAAAACATCTGCAAAGCCGAGTGGACTC...GCAAGTGACCACAATGTGAAGGAAGTCAAGTCTCTGATTGAAGGAAAATAGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR GCA 90 bp | GAAAGCATCAACCTTAAAACAAGTTTCTCTGAGTATTTACAGTGTGGTAGAAACCCTGGCTTCCCGCTCTaGAATCCGACGTTTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ESINLKTSFSEYLQCGRNPGFPL*NPTFCM Trigger: CATGCAAAACGTCGGATTGCAGAGCGGGAAGCCAGG...GTTTCTACCACACTGTAAATACTCAGAGAAACTTGTTTTAAGGTTGATGCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR GCA 90 bp | TACAAAATGTACACACTGGAAATGGCAGCAAAGCAAACACTTTTTGGTCGCAGAAAAGTCACGGCATTTTaGCTCAAGAGGAGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YKMYTLEMAAKQTLFGRRKVTAF*LKRSPG Trigger: ACCTGGACTCCTCTTGAGGCAAAATGCCGTGACTTT...TCTGCGACCAAAAAGTGTTTGCTTTGCTGCCATTTCCAGTGTGTACATTTTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGCAAAATTTCCAGCATGAAAATCCATGGTGGTATAAATATACATGCACAGCCTCATCCTTCTCCTaGTCTCGGTCTTCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFQHENPWWYKYTCTASSFS*SRSSQP Trigger: TGGCTGTGAAGACCGAGAGCAGGAGAAGGATGAGGC...TGTGCATGTATATTTATACCACCATGGATTTTCATGCTGGAAATTTTGCAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CCA 90 bp | GACCAATATAAGCATCCTTATAGGACATGTAGTATTTTGAACGCCATGCTTCAATCATCTTGTCGTCTTTaGACAAGGCGGGAAGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: DQYKHPYRTCSILNAMLQSSCRL*TRREAR Trigger: GCGAGCTTCCCGCCTTGTCCAAAGACGACAAGATGA...TTGAAGCATGGCGTTCAAAATACTACATGTCCTATAAGGATGCTTATATTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000145136.2 |
||
| CDS-3UTR TCA 90 bp | TTGCATGTTCTTGATAAAGTGCCCGATCACGTCCAAAGGAATCAAGATTTGGTGCGCTGTTTGTACAGCTaGTGTATTGCTGATTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHVLDKVPDHVQRNQDLVRCLYS*CIADSS Trigger: ACTTGAATCAGCAATACATCAGCTGTACAAACAGCG...CACCAAATCTTGATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR TCA 90 bp | GAAAGCATCAACCTTAAAACAAGTTTCTCTGAGTATTTACAGTGTGGTAGAAACGTCCAGGTGAGAAGCTaGAGTCTGATTAGGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ESINLKTSFSEYLQCGRNVQVRS*SLIRGL Trigger: CAACCCCCTAATCAGACTTCAGCTTCTCACCTGGAC...GTTTCTACCACACTGTAAATACTCAGAGAAACTTGTTTTAAGGTTGATGCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR GCA 90 bp | AAGCATCCTTATAGGACATGTAGTATTTTGAACGCCATGCTTCAAACTGTGCTTCTGGTCACTGTCAGCTaGTGTGTTGAGTTCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KHPYRTCSILNAMLQTVLLVTVS*CVEFCL Trigger: AAGACAGAACTCAACACAGCAGCTGACAGTGACCAG...AAGCACAGTTTGAAGCATGGCGTTCAAAATACTACATGTCCTATAAGGATGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR GCA 90 bp | ATGGCAGCAAAGCAAACACTTTTTGGTCGCAGATCTATTTTCCTTCAATCAGAGAGCATGTATGAAAGCTaGATCTGGGATTTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQTLFGRRSIFLQSESMYES*IWDFSW Trigger: CCAGGAGAAATCCCAGATGCAGCTTTCATACATGCT...CTCTGATTGAAGGAAAATAGATCTGCGACCAAAAAGTGTTTGCTTTGCTGCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CCA 90 bp | ACGTTTTGCATGTTCTTGATAAAGTGCCCGATCACGTCCAAAGGAATCAAGATTCACTCAAGCAAGTCTTaGACATACCCTCGCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFCMFLIKCPITSKGIKIHSSKS*TYPRIS Trigger: AGAAATGCGAGGGTATGTCCAAGACTTGCTTGAGTG...AATCTTGATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CCA 90 bp | TTCATTGTGATTCCAACCATCCTTGAAGTCTGTGTTGTAGAAAAGGGATCCCACCATGCTGCTGTTGATTaGTTTTGTGCAATTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FIVIPTILEVCVVEKGSHHAAVD*FCAILS Trigger: TGAAAGAATTGCACAAAACCAATCAACAGCAGCATG...GTGGGATCCCTTTTCTACAACACAGACTTCAAGGATGGTTGGAATCACAATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| 3UTR CAA 72 bp | TGTACACACTGGAAATGGCAGCAAAGCAAACACTTTTaGGTCGCAGATCTATTTTCCTTCAATCAGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: CTHWKWQQSKHF*VADLFSFNQRL Trigger: AAGTCTCTGATTGAAGGAAAATAGATCTGCGACCAAAAAGTGTTTGCTTTGCTGCCATTTCCAGTGTGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR TCA 90 bp | TACAAAATGTACACACTGGAAATGGCAGCAAAGCAAACACTTTTTGGTCGCAGATTTTCATGCTGCTGTTaGTTGGTTTTGTGCAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: YKMYTLEMAAKQTLFGRRFSCCC*LVLCNS Trigger: AGAATTGCACAAAACCAATCAACAGCAGCATGAAAA...TCTGCGACCAAAAAGTGTTTGCTTTGCTGCCATTTCCAGTGTGTACATTTTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS-3UTR TCA 90 bp | TATACAAAATGTACACACTGGAAATGGCAGCAAAGCAAACACTTTTTGGTCGCATTTTCATGCTGCTGTTaGTTGGTTTTGTGCAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: YTKCTHWKWQQSKHFLVAFSCCC*LVLCNS Trigger: AGAATTGCACAAAACCAATCAACAGCAGCATGAAAA...TGCGACCAAAAAGTGTTTGCTTTGCTGCCATTTCCAGTGTGTACATTTTGTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGCATCAACCTTAAAACAAGTTTCTCTGAGTATTTACAGTGTGGTAGAAACGTCATCTCCGTATTCTaGGTTCTGAAAAGCCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: ESINLKTSFSEYLQCGRNVISVF*VLKSHK Trigger: CTTATGGCTTTTCAGAACTCAGAATACGGAGATGAC...GTTTCTACCACACTGTAAATACTCAGAGAAACTTGTTTTAAGGTTGATGCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGCATCAACCTTAAAACAAGTTTCTCTGAGTATTTACAGTGTGGTAGAAACCCGTATTCTGAGTTCTaGAAAGCCATAAGGATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ESINLKTSFSEYLQCGRNPYSEF*KAIRMY Trigger: ATACATCCTTATGGCTTTTCAGAACTCAGAATACGG...GTTTCTACCACACTGTAAATACTCAGAGAAACTTGTTTTAAGGTTGATGCTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGCAAAATTTCCAGCATGAAAATCCATGGTGGTATAAATATACATGCACATGCAATCCGACGTTTTaGATGTTCTTGATAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLQNFQHENPWWYKYTCTCNPTF*MFLIKC Trigger: GCACTTTATCAAGAACATGCAAAACGTCGGATTGCA...TGTGCATGTATATTTATACCACCATGGATTTTCATGCTGGAAATTTTGCAGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CCA 90 bp | CATCAGAGCACCCAATACTGTTCCTGTAAATTGTATCTGCTAAATGTACAAGATAAGTTCATTAATCAGTaGCACCTTTTCACTGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HQSTQYCSCKLYLLNVQDKFINQ*HLFTET Trigger: TGTTTCAGTGAAAAGGTGCCACTGATTAATGAACTT...ATCTTGTACATTTAGCAGATACAATTTACAGGAACAGTATTGGGTGCTCTGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| 3UTR CAA 72 bp | TTTCCACATCAGAGCACCCAATACTGTTCCTGTAAATaGTATCTGCTAAATGTACAAGATATCGGCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FPHQSTQYCSCK*YLLNVQDIGKN Trigger: ATTTTTGCCGATATCTTGTACATTTAGCAGATACAATTTACAGGAACAGTATTGGGTGCTCTGATGTGGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS GCA 90 bp | GCACCTCTTTGTTCTCGCGAGGCCTCTTGCGCGGCTTCAGCCCATTaGCGGGCTCCGCGCCGCCGGAGATGCCGCCCCCGGCCTCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: APLCSREASCAASAH*RAPRRRRCRPRPQR Trigger: GCGCTGAGGCCGGGGGCGGCATCTCCGGCGGCGCGGAGCCCGGCAATGGGCTGAAGCCGCGCAAGAGGCCTCGCGAGAACAAAGAGGTGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS TCA 90 bp | CCTCGCGGACGAGGCGGCCTTTGCCAGGCTCACTGTCGTGAGGCGTaGAGTCGCCCAGCTCCCGGGCCAGTTGTCGCTTCTTTCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRGRGGLCQAHCREA*SRPAPGPVVASFLQ Trigger: CTGCAAGAAAGAAGCGACAACTGGCCCGGGAGCTGGGCGACTTCACGCCTCACGACAGTGAGCCTGGCAAAGGCCGCCTCGTCCGCGAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS TCA 90 bp | TTCTCGTCCTCGCGGACGAGGCGGCCTTTGCCAGGCTCACTGTCGTaGGGCGTGAAGTCGCCCAGCTCCCGGGCCAGTTGTCGCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FSSSRTRRPLPGSLS*GVKSPSSRASCRFF Trigger: AAAGAAGCGACAACTGGCCCGGGAGCTGGGCGACTTCACGCCTCACGACAGTGAGCCTGGCAAAGGCCGCCTCGTCCGCGAGGACGAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS CCA 90 bp | CTGGGATTTCTCCTGGGCGGAGCACGTTCAGGGAAGACAGAGCATTaGAGAAGGCGCCCCCGGCCTTGGGCTTCTCCTCCTCCTTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LGFLLGGARSGKTEH*RRRPRPWASPPPSR Trigger: GCGAGAAGGAGGAGGAGAAGCCCAAGGCCGGGGGCGCCTTCTCCAATGCTCTGTCTTCCCTGAACGTGCTCCGCCCAGGAGAAATCCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGTGATCTGCCATCTGACCGGTTTGCTCTCTGGCTTGCCTACGGCGAGTCCGCCCTGGGCACCTCTTaGTTCTCGCGAGGCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGDLPSDRFALWLAYGESALGTS*FSRGLL Trigger: CAAGAGGCCTCGCGAGAACAAAGAGGTGCCCAGGGC...GGACTCGCCGTAGGCAAGCCAGAGAGCAAACCGGTCAGATGGCAGATCACCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CAA 90 bp | GCTGCCTCCAGGGCAGACTCCCAGAAGTCCCACACTCACTCAACGACAAAGTCTTTCTCGCGAGGCCTCTaGCGCGGCTTCAGCCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: AASRADSQKSHTHSTTKSFSRGL*RGFSPL Trigger: CAATGGGCTGAAGCCGCGCAAGAGGCCTCGCGAGAA...AGACTTTGTCGTTGAGTGAGTGTGGGACTTCTGGGAGTCTGCCCTGGAGGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS TCA 90 bp | CGCCCAGCTCCCGGGCCAGTTGTCGCTTCTTTCTTGCAGCATGTATaGAAGCTGCATCTGGGATTTCTCCTGGGCGGAGCACGTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RPAPGPVVASFLQHV*KLHLGFLLGGARSG Trigger: CCCTGAACGTGCTCCGCCCAGGAGAAATCCCAGATGCAGCTTTCATACATGCTGCAAGAAAGAAGCGACAACTGGCCCGGGAGCTGGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS GCA 90 bp | AGGCGTGAAGTCGCCCAGCTCCCGGGCCAGTTGTCGCTTCTTTCTTaGAGCATGTATGAAAGCTGCATCTGGGATTTCTCCTGGGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RREVAQLPGQLSLLS*SMYESCIWDFSWAE Trigger: CTCCGCCCAGGAGAAATCCCAGATGCAGCTTTCATACATGCTGCAAGAAAGAAGCGACAACTGGCCCGGGAGCTGGGCGACTTCACGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | AATAGTGAGAAAGGTCAGTCAGCCCAGGCCATGCAGTTAGTTTGTGGCTCATCCAAGGCGCCCCCGGCCTaGGGCTTCTCCTCCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSEKGQSAQAMQLVCGSSKAPPA*GFSSSF Trigger: GAAGGAGGAGGAGAAGCCCAAGGCCGGGGGCGCCTT...GGATGAGCCACAAACTAACTGCATGGCCTGGGCTGACTGACCTTTCTCACTATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS GCA 90 bp | CTCCCGGGCCAGTTGTCGCTTCTTTCTTGCAGCATGTATGAAAGCTaGATCTGGGATTTCTCCTGGGCGGAGCACGTTCAGGGAAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: LPGQLSLLSCSMYES*IWDFSWAEHVQGRQ Trigger: CTGTCTTCCCTGAACGTGCTCCGCCCAGGAGAAATCCCAGATGCAGCTTTCATACATGCTGCAAGAAAGAAGCGACAACTGGCCCGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS GCA 90 bp | CCTTTTCTAATCTGCTCCTGCTCCCAGCGGCTGAGCTCCTCGTCTTaGTCTCCAGTTACTAACGCGTCATCGTCACTCCCCTCAATACCT | + |
|
Preference number: 5 (lower is better) Translates to: PFLICSCSQRLSSSS*SPVTNASSSLPSIP Trigger: AGGTATTGAGGGGAGTGACGATGACGCGTTAGTAACTGGAGAGCAAGACGAGGAGCTCAGCCGCTGGGAGCAGGAGCAGATTAGAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGCCCAGGCCATGCAGTTAGTTTGTGGCTCATCCTACCCCACACTACTGCAATCATCTTGTCGTCTTaGGACAAGGCGGGAAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VSPGHAVSLWLILPHTTAIILSS*DKAGSS Trigger: CGAGCTTCCCGCCTTGTCCAAAGACGACAAGATGAT...TGCAGTAGTGTGGGGTAGGATGAGCCACAAACTAACTGCATGGCCTGGGCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | CTACTGCATATGTCGCCTCAGGCTCGTATTAAACCCACAGCTGCCTCCAGGGCACAAAGTCACGGCATTTaGCCTCAAGAGGAGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLHMSPQARIKPTAASRAQSHGI*PQEESR Trigger: CCTGGACTCCTCTTGAGGCAAAATGCCGTGACTTTG...TGCCCTGGAGGCAGCTGTGGGTTTAATACGAGCCTGAGGCGACATATGCAGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | GAACAGCAGAGATTCAAACCACAGCATGGTTTCAAAGTCACGGCATTTTGCCTCTTCTCGCGAGGCCTCTaGCGCGGCTTCAGCCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: EQQRFKPQHGFKVTAFCLFSRGL*RGFSPL Trigger: CAATGGGCTGAAGCCGCGCAAGAGGCCTCGCGAGAA...GAGGCAAAATGCCGTGACTTTGAAACCATGCTGTGGTTTGAATCTCTGCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CAA 90 bp | ATTGTGATTCCAACCATCCTTGAAGTCTGTGTTGTAGAAAAGGGATCCCACATGAAGGCGCCCCCGGCCTaGGGCTTCTCCTCCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IVIPTILEVCVVEKGSHMKAPPA*GFSSSF Trigger: GAAGGAGGAGGAGAAGCCCAAGGCCGGGGGCGCCTT...CATGTGGGATCCCTTTTCTACAACACAGACTTCAAGGATGGTTGGAATCACAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS CCA 90 bp | GGCCAGTTGTCGCTTCTTTCTTGCAGCATGTATGAAAGCTGCATCTaGGATTTCTCCTGGGCGGAGCACGTTCAGGGAAGACAGAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: GQLSLLSCSMYESCI*DFSWAEHVQGRQSI Trigger: AATGCTCTGTCTTCCCTGAACGTGCTCCGCCCAGGAGAAATCCCAGATGCAGCTTTCATACATGCTGCAAGAAAGAAGCGACAACTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | GGATCCCACATGGTTTCAGCTATCACTGTCAGCTTGGGGAGAATGACCTTCTCCATCATCTTGTCGTCTTaGGACAAGGCGGGAAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GSHMVSAITVSLGRMTFSIILSS*DKAGSS Trigger: CGAGCTTCCCGCCTTGTCCAAAGACGACAAGATGAT...GGAGAAGGTCATTCTCCCCAAGCTGACAGTGATAGCTGAAACCATGTGGGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CAA 90 bp | GCTGCCTCCAGGGCAGACTCCCAGAAGTCCCACACTCACTCAACGACAAAGTCTACGTTTTGCATGTTCTaGATAAAGTGCCCGATCACG | + |
|
Preference number: 5 (lower is better) Translates to: AASRADSQKSHTHSTTKSTFCMF*IKCPIT Trigger: CGTGATCGGGCACTTTATCAAGAACATGCAAAACGT...AGACTTTGTCGTTGAGTGAGTGTGGGACTTCTGGGAGTCTGCCCTGGAGGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | CTACTGCATATGTCGCCTCAGGCTCGTATTAAACCCACAGCTGCCTCCAGGGCAAGGGGGTTGAACAGTTaGGGCAGACAAAGACCAATA | + |
|
Preference number: 5 (lower is better) Translates to: LLHMSPQARIKPTAASRARGLNS*GRQRPI Trigger: TATTGGTCTTTGTCTGCCCAAACTGTTCAACCCCCT...TGCCCTGGAGGCAGCTGTGGGTTTAATACGAGCCTGAGGCGACATATGCAGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS TCA 90 bp | TGCTCGCTGATGACAACTCCATCTTCTGGGTTTGTGTCCTTAGCATaGCACGTTTTGTCCAGAGGCTGGTCACTGTCAGCTGCTGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CSLMTTPSSGFVSLA*HVLSRGWSLSAAVL Trigger: CAACACAGCAGCTGACAGTGACCAGCCTCTGGACAAAACGTGTCATGCTAAGGACACAAACCCAGAAGATGGAGTTGTCATCAGCGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS CCA 90 bp | GTCCATTTCATCCTCACCGTGCTCGCTGATGACAACTCCATCTTCTaGGTTTGTGTCCTTAGCATGACACGTTTTGTCCAGAGGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VHFILTVLADDNSIF*VCVLSMTRFVQRLV Trigger: GACCAGCCTCTGGACAAAACGTGTCATGCTAAGGACACAAACCCAGAAGATGGAGTTGTCATCAGCGAGCACGGTGAGGATGAAATGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGCCCAGGCCATGCAGTTAGTTTGTGGCTCATCCTACCCCACACTACTGCACTGTCAGCTGCTGTGTaGAGTTCTGTCTTGATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VSPGHAVSLWLILPHTTALSAAV*SSVLIF Trigger: AAAGATCAAGACAGAACTCAACACAGCAGCTGACAG...TGCAGTAGTGTGGGGTAGGATGAGCCACAAACTAACTGCATGGCCTGGGCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCCTCCAGGGCAGACTCCCAGAAGTCCCACACTCACTCAACGACAAAGTCTCTGCAATCCGACGTTTaGCATGTTCTTGATAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AASRADSQKSHTHSTTKSLQSDV*HVLDKV Trigger: CACTTTATCAAGAACATGCAAAACGTCGGATTGCAG...AGACTTTGTCGTTGAGTGAGTGTGGGACTTCTGGGAGTCTGCCCTGGAGGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGCCCAGGCCATGCAGTTAGTTTGTGGCTCATCCTACCCCACACTACTGCACCAAAGCCCGAACGCTaGCAAGAAGTTTTACTATCT | + |
|
Preference number: 5 (lower is better) Translates to: VSPGHAVSLWLILPHTTAPKPER*QEVLLS Trigger: AGATAGTAAAACTTCTTGCAAGCGTTCGGGCTTTGG...TGCAGTAGTGTGGGGTAGGATGAGCCACAAACTAACTGCATGGCCTGGGCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | ATCTATAGCTGGGCAGGGAAGACAATAGTGAGAAAGGTCAGTCAGCCCAGGCCAACACTCAAGCAAGTCTaGGACATACCCTCGCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: IYSWAGKTIVRKVSQPRPTLKQV*DIPSHF Trigger: GAAATGCGAGGGTATGTCCAAGACTTGCTTGAGTGT...TGGCCTGGGCTGACTGACCTTTCTCACTATTGTCTTCCCTGCCCAGCTATAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS GCA 90 bp | GGCTTCCCGCTCTGCAATCCGACGTTTTGCATGTTCTTGATAAAGTaGCCGATCACGTCCAAAGGAATCAAGATTTGGTGCCATCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GFPLCNPTFCMFLIK*PITSKGIKIWCHQS Trigger: GCTTTGATGGCACCAAATCTTGATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAGCGGGAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | AGCATGGTTTCAAAGTCACGGCATTTTGCCTCAAGAGGAGTCCAGGTGAGAAGCACTGGGCTGACTTGCTaGAACCTGAGGGATGTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SMVSKSRHFASRGVQVRSTGLTC*NLRDVN Trigger: ATTAACATCCCTCAGGTTCAAGCAAGTCAGCCCAGT...GCTTCTCACCTGGACTCCTCTTGAGGCAAAATGCCGTGACTTTGAAACCATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CAA 90 bp | CTGCCTCCAGGGCAGACTCCCAGAAGTCCCACACTCACTCAACGACAAAGTCTTATCTTTAATATCATCTaGTCGTCTTTGGACAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LPPGQTPRSPTLTQRQSLIFNII*SSLDKA Trigger: CGCCTTGTCCAAAGACGACAAGATGATATTAAAGAT...AAGACTTTGTCGTTGAGTGAGTGTGGGACTTCTGGGAGTCTGCCCTGGAGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | ACACTGCAAAATTTCCAGCATGAAAATCCATGGTGGTATAAATATACATGCACATCCGAGTCGTTCCGCTaGCGCACGTTCACCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TLQNFQHENPWWYKYTCTSESFR*RTFTRR Trigger: CCGGCGGGTGAACGTGCGCAAGCGGAACGACTCGGA...TGTGCATGTATATTTATACCACCATGGATTTTCATGCTGGAAATTTTGCAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | CTACTGCATATGTCGCCTCAGGCTCGTATTAAACCCACAGCTGCCTCCAGGGCAAGGACATGTAGTATTTaGAACGCCATGCTTCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: LLHMSPQARIKPTAASRARTCSI*NAMLQT Trigger: AGTTTGAAGCATGGCGTTCAAAATACTACATGTCCT...TGCCCTGGAGGCAGCTGTGGGTTTAATACGAGCCTGAGGCGACATATGCAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS GCA 90 bp | GAGACTTGGCATCTGATGATCCATAGGCTGTGTAACTATACGGTATaGCATAGGATGCACCGTAAGGCATTGTCTGGTAGGTGTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ETWHLMIHRLCNYTV*HRMHRKALSGRCSG Trigger: ACCAGAACACCTACCAGACAATGCCTTACGGTGCATCCTATGGCATACCGTATAGTTACACAGCCTATGGATCATCAGATGCCAAGTCTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | ACGTTTTGCATGTTCTTGATAAAGTGCCCGATCACGTCCAAAGGAATCAAGATTTTCTTCCTCCTCGTCTaGGAAGCTGAGCAGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TFCMFLIKCPITSKGIKIFFLLV*EAEQAG Trigger: GCCAGCCTGCTCAGCTTCCAAGACGAGGAGGAAGAA...AATCTTGATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CAA 90 bp | TTCCTTCACATTGTGGTCACTTGCAACAGATATAGCGTGATCCAAAGCCCGAACATGCACCGTAAGGCATaGTCTGGTAGGTGTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FLHIVVTCNRYSVIQSPNMHRKA*SGRCSG Trigger: ACCAGAACACCTACCAGACAATGCCTTACGGTGCAT...GTTCGGGCTTTGGATCACGCTATATCTGTTGCAAGTGACCACAATGTGAAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CAA 90 bp | CTACTGCATATGTCGCCTCAGGCTCGTATTAAACCCACAGCTGCCTCCAGGGCATCATTACTGGGAGTTTaGAAAGGGACTGTATTATCT | + |
|
Preference number: 5 (lower is better) Translates to: LLHMSPQARIKPTAASRASLLGV*KGTVLS Trigger: AGATAATACAGTCCCTTTCAAAACTCCCAGTAATGA...TGCCCTGGAGGCAGCTGTGGGTTTAATACGAGCCTGAGGCGACATATGCAGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGCATCAACCTTAAAACAAGTTTCTCTGAGTATTTACAGTGTGGTAGAAACGCCCTGGGCACCTCTTaGTTCTCGCGAGGCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ESINLKTSFSEYLQCGRNALGTS*FSRGLL Trigger: CAAGAGGCCTCGCGAGAACAAAGAGGTGCCCAGGGC...GTTTCTACCACACTGTAAATACTCAGAGAAACTTGTTTTAAGGTTGATGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | TATACAAAATGTACACACTGGAAATGGCAGCAAAGCAAACACTTTTTGGTCGCATGCCATCTGACCGGTTaGCTCTCTGGCTTGCCTACG | + |
|
Preference number: 5 (lower is better) Translates to: YTKCTHWKWQQSKHFLVACHLTG*LSGLPT Trigger: CGTAGGCAAGCCAGAGAGCAAACCGGTCAGATGGCA...TGCGACCAAAAAGTGTTTGCTTTGCTGCCATTTCCAGTGTGTACATTTTGTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | GAACAGCAGAGATTCAAACCACAGCATGGTTTCAAAGTCACGGCATTTTGCCTCCTGTCAGCTGCTGTGTaGAGTTCTGTCTTGATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EQQRFKPQHGFKVTAFCLLSAAV*SSVLIF Trigger: AAAGATCAAGACAGAACTCAACACAGCAGCTGACAG...GAGGCAAAATGCCGTGACTTTGAAACCATGCTGTGGTTTGAATCTCTGCTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CAA 90 bp | TTCATTGTGATTCCAACCATCCTTGAAGTCTGTGTTGTAGAAAAGGGATCCCACGGAGTCCACTCGGCTTaGCAGATGTTTTTCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FIVIPTILEVCVVEKGSHGVHSA*QMFFML Trigger: CAGCATGAAAAACATCTGCAAAGCCGAGTGGACTCC...GTGGGATCCCTTTTCTACAACACAGACTTCAAGGATGGTTGGAATCACAATGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CAA 90 bp | ACGTTTTGCATGTTCTTGATAAAGTGCCCGATCACGTCCAAAGGAATCAAGATTATCATCTTGTCGTCTTaGGACAAGGCGGGAAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TFCMFLIKCPITSKGIKIIILSS*DKAGSS Trigger: CGAGCTTCCCGCCTTGTCCAAAGACGACAAGATGAT...AATCTTGATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000145136.2 |
||
| CDS-3UTR CAA 90 bp | AACTTTGCTAGACTCTTTCAAAATTCGATCTCCTGGCTTCCCGCTCTGCAATCCTCAAGATGGACTGACTaGAATGGCTTGAAAACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: NFARLFQNSISWLPALQSSRWTD*NGLKTP Trigger: CGGAGTTTTCAAGCCATTCAAGTCAGTCCATCTTGA...GGATTGCAGAGCGGGAAGCCAGGAGATCGAATTTTGAAAGAGTCTAGCAAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145136.2 |
||
| CDS-3UTR CAA 90 bp | AATAGTGAGAAAGGTCAGTCAGCCCAGGCCATGCAGTTAGTTTGTGGCTCATCCCCATCAAAGCTTTATTaGAATGGCTTGAAAACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: NSEKGQSAQAMQLVCGSSPSKLY*NGLKTP Trigger: CGGAGTTTTCAAGCCATTCAAATAAAGCTTTGATGG...GGATGAGCCACAAACTAACTGCATGGCCTGGGCTGACTGACCTTTCTCACTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | ATCTATAGCTGGGCAGGGAAGACAATAGTGAGAAAGGTCAGTCAGCCCAGGCCACAAAGGAATCAAGATTaGGTGCCATCAAAGCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: IYSWAGKTIVRKVSQPRPQRNQD*VPSKLY Trigger: ATAAAGCTTTGATGGCACCAAATCTTGATTCCTTTG...TGGCCTGGGCTGACTGACCTTTCTCACTATTGTCTTCCCTGCCCAGCTATAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS TCA 90 bp | CTGGTGGAGTCCACTCGGCTTTGCAGATGTTTTTCATGCTGCTGTTaGTTGGTTTTGTGCAATTCTTTCATGGAGTCCAACCTGTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LVESTRLCRCFSCCC*LVLCNSFMESNLSL Trigger: TAAAGACAGGTTGGACTCCATGAAAGAATTGCACAAAACCAATCAACAGCAGCATGAAAAACATCTGCAAAGCCGAGTGGACTCCACCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS TCA 90 bp | TTGGACAAGGCGGGAAGCTCGCTGTTTGTACAGCTGATGTATTGCTaGTTCAAGTTCATTAATCAGTGGCACCTTTTCACTGAAACACTC | + |
|
Preference number: 5 (lower is better) Translates to: LDKAGSSLFVQLMYC*FKFINQWHLFTETL Trigger: GAGTGTTTCAGTGAAAAGGTGCCACTGATTAATGAACTTGAATCAGCAATACATCAGCTGTACAAACAGCGAGCTTCCCGCCTTGTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS TCA 90 bp | TCTTGTCGTCTTTGGACAAGGCGGGAAGCTCGCTGTTTGTACAGCTaGTGTATTGCTGATTCAAGTTCATTAATCAGTGGCACCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCRLWTRREARCLYS*CIADSSSLISGTFS Trigger: TGAAAAGGTGCCACTGATTAATGAACTTGAATCAGCAATACATCAGCTGTACAAACAGCGAGCTTCCCGCCTTGTCCAAAGACGACAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | CAAACCACAGCATGGTTTCAAAGTCACGGCATTTTGCCTCAAGAGGAGTCCAGGGTGTTGAGTTCTGTCTaGATCTTTGATTTTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QTTAWFQSHGILPQEESRVLSSV*IFDFSR Trigger: CCTTGAAAAATCAAAGATCAAGACAGAACTCAACAC...CCTGGACTCCTCTTGAGGCAAAATGCCGTGACTTTGAAACCATGCTGTGGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CAA 90 bp | AATAGTGAGAAAGGTCAGTCAGCCCAGGCCATGCAGTTAGTTTGTGGCTCATCCTTTTTCATGCTGCTGTaGATTGGTTTTGTGCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: NSEKGQSAQAMQLVCGSSFFMLL*IGFVQF Trigger: GAATTGCACAAAACCAATCAACAGCAGCATGAAAAA...GGATGAGCCACAAACTAACTGCATGGCCTGGGCTGACTGACCTTTCTCACTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | AACAGATATAGCGTGATCCAAAGCCCGAACGCTTGCAAGAAGTTTTACTATCTGACACTCAAGCAAGTCTaGGACATACCCTCGCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: NRYSVIQSPNACKKFYYLTLKQV*DIPSHF Trigger: GAAATGCGAGGGTATGTCCAAGACTTGCTTGAGTGT...CAGATAGTAAAACTTCTTGCAAGCGTTCGGGCTTTGGATCACGCTATATCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CAA 90 bp | TTCAAAATTCGATCTCCTGGCTTCCCGCTCTGCAATCCGACGTTTTGCATGTTCATCTTTAATATCATCTaGTCGTCTTTGGACAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FKIRSPGFPLCNPTFCMFIFNII*SSLDKA Trigger: CGCCTTGTCCAAAGACGACAAGATGATATTAAAGAT...GAACATGCAAAACGTCGGATTGCAGAGCGGGAAGCCAGGAGATCGAATTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145136.2 |
||
| CDS GCA 90 bp | TCACTGAAACACTCAAGCAAGTCTTGGACATACCCTCGCATTTCTTaGAAAAATTTATACCGTTCACCAATACCCCCAGAAGACCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLKHSSKSWTYPRIS*KNLYRSPIPPEDPS Trigger: AGAAGGGTCTTCTGGGGGTATTGGTGAACGGTATAAATTTTTGCAAGAAATGCGAGGGTATGTCCAAGACTTGCTTGAGTGTTTCAGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | TATACAAAATGTACACACTGGAAATGGCAGCAAAGCAAACACTTTTTGGTCGCAATGCACCGTAAGGCATaGTCTGGTAGGTGTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: YTKCTHWKWQQSKHFLVAMHRKA*SGRCSG Trigger: ACCAGAACACCTACCAGACAATGCCTTACGGTGCAT...TGCGACCAAAAAGTGTTTGCTTTGCTGCCATTTCCAGTGTGTACATTTTGTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTGATTCCAACCATCCTTGAAGTCTGTGTTGTAGAAAAGGGATCCCACATGTCAAGATGGACTGACTaGAATGGCTTGAAAACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: IVIPTILEVCVVEKGSHMSRWTD*NGLKTP Trigger: CGGAGTTTTCAAGCCATTCAAGTCAGTCCATCTTGA...CATGTGGGATCCCTTTTCTACAACACAGACTTCAAGGATGGTTGGAATCACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CAA 90 bp | CTCTGCAATCCGACGTTTTGCATGTTCTTGATAAAGTGCCCGATCACGTCCAAATCATTACTGGGAGTTTaGAAAGGGACTGTATTATCT | + |
|
Preference number: 5 (lower is better) Translates to: LCNPTFCMFLIKCPITSKSLLGV*KGTVLS Trigger: AGATAATACAGTCCCTTTCAAAACTCCCAGTAATGA...TTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATTGCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CAA 90 bp | AATCCGACGTTTTGCATGTTCTTGATAAAGTGCCCGATCACGTCCAAAGGAATCACTGACTTGAATGGCTaGAAAACTCCGAAGATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: NPTFCMFLIKCPITSKGITDLNG*KTPKIH Trigger: ATGAATCTTCGGAGTTTTCAAGCCATTCAAGTCAGT...GATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATGCAAAACGTCGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000145136.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGCATCAACCTTAAAACAAGTTTCTCTGAGTATTTACAGTGTGGTAGAAACGGAGTCCACTCGGCTTaGCAGATGTTTTTCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ESINLKTSFSEYLQCGRNGVHSA*QMFFML Trigger: CAGCATGAAAAACATCTGCAAAGCCGAGTGGACTCC...GTTTCTACCACACTGTAAATACTCAGAGAAACTTGTTTTAAGGTTGATGCTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | TATACAAAATGTACACACTGGAAATGGCAGCAAAGCAAACACTTTTTGGTCGCACCTTCAATCAGAGACTaGACTTCCTTCACATTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YTKCTHWKWQQSKHFLVAPSIRD*TSFTLW Trigger: CCACAATGTGAAGGAAGTCAAGTCTCTGATTGAAGG...TGCGACCAAAAAGTGTTTGCTTTGCTGCCATTTCCAGTGTGTACATTTTGTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGCATCAACCTTAAAACAAGTTTCTCTGAGTATTTACAGTGTGGTAGAAACACTGGGCTGACTTGCTaGAACCTGAGGGATGTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: ESINLKTSFSEYLQCGRNTGLTC*NLRDVN Trigger: ATTAACATCCCTCAGGTTCAAGCAAGTCAGCCCAGT...GTTTCTACCACACTGTAAATACTCAGAGAAACTTGTTTTAAGGTTGATGCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCAGCAAAGCAAACACTTTTTGGTCGCAGATCTATTTTCCTTCAATCAGAGATCTTTAATATCATCTaGTCGTCTTTGGACAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: MAAKQTLFGRRSIFLQSEIFNII*SSLDKA Trigger: CGCCTTGTCCAAAGACGACAAGATGATATTAAAGAT...CTCTGATTGAAGGAAAATAGATCTGCGACCAAAAAGTGTTTGCTTTGCTGCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CAA 90 bp | TATACAAAATGTACACACTGGAAATGGCAGCAAAGCAAACACTTTTTGGTCGCAACAGTTGATTACATTTaGGGCTTTTCTGATGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: YTKCTHWKWQQSKHFLVATVDYI*GFSDAV Trigger: GACAGCATCAGAAAAGCCCAAAATGTAATCAACTGT...TGCGACCAAAAAGTGTTTGCTTTGCTGCCATTTCCAGTGTGTACATTTTGTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | GACCAATATAAGCATCCTTATAGGACATGTAGTATTTTGAACGCCATGCTTCAAACTGACTTGAATGGCTaGAAAACTCCGAAGATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DQYKHPYRTCSILNAMLQTDLNG*KTPKIH Trigger: ATGAATCTTCGGAGTTTTCAAGCCATTCAAGTCAGT...TTGAAGCATGGCGTTCAAAATACTACATGTCCTATAAGGATGCTTATATTGGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000145136.2 |
||
| CDS-3UTR CAA 90 bp | TATAAGCATCCTTATAGGACATGTAGTATTTTGAACGCCATGCTTCAAACTGTGTTTTTCATGCTGCTGTaGATTGGTTTTGTGCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: YKHPYRTCSILNAMLQTVFFMLL*IGFVQF Trigger: GAATTGCACAAAACCAATCAACAGCAGCATGAAAAA...CACAGTTTGAAGCATGGCGTTCAAAATACTACATGTCCTATAAGGATGCTTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CAA 90 bp | GACCAATATAAGCATCCTTATAGGACATGTAGTATTTTGAACGCCATGCTTCAAATACCCTCGCATTTCTaGCAAAAATTTATACCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DQYKHPYRTCSILNAMLQIPSHF*QKFIPF Trigger: GAACGGTATAAATTTTTGCAAGAAATGCGAGGGTAT...TTGAAGCATGGCGTTCAAAATACTACATGTCCTATAAGGATGCTTATATTGGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023698.12 |
||
| CDS-3UTR CAA 90 bp | GAAAGCATCAACCTTAAAACAAGTTTCTCTGAGTATTTACAGTGTGGTAGAAACGTGTTGAGTTCTGTCTaGATCTTTGATTTTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ESINLKTSFSEYLQCGRNVLSSV*IFDFSR Trigger: CCTTGAAAAATCAAAGATCAAGACAGAACTCAACAC...GTTTCTACCACACTGTAAATACTCAGAGAAACTTGTTTTAAGGTTGATGCTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGCATCAACCTTAAAACAAGTTTCTCTGAGTATTTACAGTGTGGTAGAAACATACCCTCGCATTTCTaGCAAAAATTTATACCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ESINLKTSFSEYLQCGRNIPSHF*QKFIPF Trigger: GAACGGTATAAATTTTTGCAAGAAATGCGAGGGTAT...GTTTCTACCACACTGTAAATACTCAGAGAAACTTGTTTTAAGGTTGATGCTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
||
| CDS GCA 72 bp | TGTTCTCGCGAGGCCTCTTGCGCGGCTTCAGCCCATTaGCGGGCTCCGCGCCGCCGGAGATGCCGCCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: CSREASCAASAH*RAPRRRRCRPR Trigger: CCGGGGGCGGCATCTCCGGCGGCGCGGAGCCCGGCAATGGGCTGAAGCCGCGCAAGAGGCCTCGCGAGAACA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS GCA 72 bp | TGGCCCTGGGCACCTCTTTGTTCTCGCGAGGCCTCTTaGGCGGCTTCAGCCCATTGCCGGGCTCCGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: WPWAPLCSREAS*AASAHCRAPRR Trigger: GCGGCGCGGAGCCCGGCAATGGGCTGAAGCCGCGCAAGAGGCCTCGCGAGAACAAAGAGGTGCCCAGGGCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS TCA 72 bp | TCGCGGACGAGGCGGCCTTTGCCAGGCTCACTGTCGTaGGGCGTGAAGTCGCCCAGCTCCCGGGCCAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SRTRRPLPGSLS*GVKSPSSRASC Trigger: ACAACTGGCCCGGGAGCTGGGCGACTTCACGCCTCACGACAGTGAGCCTGGCAAAGGCCGCCTCGTCCGCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS TCA 72 bp | CGAGGCGGCCTTTGCCAGGCTCACTGTCGTGAGGCGTaGAGTCGCCCAGCTCCCGGGCCAGTTGTCGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RGGLCQAHCREA*SRPAPGPVVAS Trigger: AGAAGCGACAACTGGCCCGGGAGCTGGGCGACTTCACGCCTCACGACAGTGAGCCTGGCAAAGGCCGCCTCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS CCA 72 bp | CTCCTGGGCGGAGCACGTTCAGGGAAGACAGAGCATTaGAGAAGGCGCCCCCGGCCTTGGGCTTCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLGGARSGKTEH*RRRPRPWASPP Trigger: AGGAGGAGAAGCCCAAGGCCGGGGGCGCCTTCTCCAATGCTCTGTCTTCCCTGAACGTGCTCCGCCCAGGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS CAA 90 bp | TCTGGGATTTCTCCTGGGCGGAGCACGTTCAGGGAAGACAGAGCATaGGAGAAGGCGCCCCCGGCCTTGGGCTTCTCCTCCTCCTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SGISPGRSTFREDRA*EKAPPALGFSSSFS Trigger: CGAGAAGGAGGAGGAGAAGCCCAAGGCCGGGGGCGCCTTCTCCAATGCTCTGTCTTCCCTGAACGTGCTCCGCCCAGGAGAAATCCCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS GCA 72 bp | ATCTGCTCCTGCTCCCAGCGGCTGAGCTCCTCGTCTTaGTCTCCAGTTACTAACGCGTCATCGTCACTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ICSCSQRLSSSS*SPVTNASSSLP Trigger: GGGGAGTGACGATGACGCGTTAGTAACTGGAGAGCAAGACGAGGAGCTCAGCCGCTGGGAGCAGGAGCAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS CAA 90 bp | AGGCTCACTGTCGTGAGGCGTGAAGTCGCCCAGCTCCCGGGCCAGTaGTCGCTTCTTTCTTGCAGCATGTATGAAAGCTGCATCTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RLTVVRREVAQLPGQ*SLLSCSMYESCIWD Trigger: ATCCCAGATGCAGCTTTCATACATGCTGCAAGAAAGAAGCGACAACTGGCCCGGGAGCTGGGCGACTTCACGCCTCACGACAGTGAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS GCA 72 bp | GTCGCCCAGCTCCCGGGCCAGTTGTCGCTTCTTTCTTaGAGCATGTATGAAAGCTGCATCTGGGATTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VAQLPGQLSLLS*SMYESCIWDFS Trigger: GGAGAAATCCCAGATGCAGCTTTCATACATGCTGCAAGAAAGAAGCGACAACTGGCCCGGGAGCTGGGCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS GCA 72 bp | CAGTTGTCGCTTCTTTCTTGCAGCATGTATGAAAGCTaGATCTGGGATTTCTCCTGGGCGGAGCACGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QLSLLSCSMYES*IWDFSWAEHVQ Trigger: CTGAACGTGCTCCGCCCAGGAGAAATCCCAGATGCAGCTTTCATACATGCTGCAAGAAAGAAGCGACAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
||
| CDS CCA 72 bp | TCGCTTCTTTCTTGCAGCATGTATGAAAGCTGCATCTaGGATTTCTCCTGGGCGGAGCACGTTCAGGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLLSCSMYESCI*DFSWAEHVQGR Trigger: TCTTCCCTGAACGTGCTCCGCCCAGGAGAAATCCCAGATGCAGCTTTCATACATGCTGCAAGAAAGAAGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
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| CDS CCA 72 bp | ATCCTCACCGTGCTCGCTGATGACAACTCCATCTTCTaGGTTTGTGTCCTTAGCATGACACGTTTTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ILTVLADDNSIF*VCVLSMTRFVQ Trigger: CTGGACAAAACGTGTCATGCTAAGGACACAAACCCAGAAGATGGAGTTGTCATCAGCGAGCACGGTGAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
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| CDS TCA 72 bp | ATGACAACTCCATCTTCTGGGTTTGTGTCCTTAGCATaGCACGTTTTGTCCAGAGGCTGGTCACTGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: MTTPSSGFVSLA*HVLSRGWSLSA Trigger: AGCTGACAGTGACCAGCCTCTGGACAAAACGTGTCATGCTAAGGACACAAACCCAGAAGATGGAGTTGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
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| CDS CAA 90 bp | AGGCTGTGTAACTATACGGTATGCCATAGGATGCACCGTAAGGCATaGTCTGGTAGGTGTTCTGGTAGTACACATTCACTTCACTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RLCNYTVCHRMHRKA*SGRCSGSTHSLHWA Trigger: AGCCCAGTGAAGTGAATGTGTACTACCAGAACACCTACCAGACAATGCCTTACGGTGCATCCTATGGCATACCGTATAGTTACACAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
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| CDS GCA 72 bp | TCCATAGGCTGTGTAACTATACGGTATGCCATAGGATaGACCGTAAGGCATTGTCTGGTAGGTGTTCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: SIGCVTIRYAIG*TVRHCLVGVLV Trigger: TACCAGAACACCTACCAGACAATGCCTTACGGTGCATCCTATGGCATACCGTATAGTTACACAGCCTATGGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
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| CDS GCA 72 bp | CATCTGATGATCCATAGGCTGTGTAACTATACGGTATaGCATAGGATGCACCGTAAGGCATTGTCTGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: HLMIHRLCNYTV*HRMHRKALSGR Trigger: CCTACCAGACAATGCCTTACGGTGCATCCTATGGCATACCGTATAGTTACACAGCCTATGGATCATCAGATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
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| CDS CAA 90 bp | CCTGGTGGAGTCCACTCGGCTTTGCAGATGTTTTTCATGCTGCTGTaGATTGGTTTTGTGCAATTCTTTCATGGAGTCCAACCTGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: PGGVHSALQMFFMLL*IGFVQFFHGVQPVF Trigger: AAAGACAGGTTGGACTCCATGAAAGAATTGCACAAAACCAATCAACAGCAGCATGAAAAACATCTGCAAAGCCGAGTGGACTCCACCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
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| CDS TCA 72 bp | CTTTGGACAAGGCGGGAAGCTCGCTGTTTGTACAGCTaGTGTATTGCTGATTCAAGTTCATTAATCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LWTRREARCLYS*CIADSSSLISG Trigger: GCCACTGATTAATGAACTTGAATCAGCAATACATCAGCTGTACAAACAGCGAGCTTCCCGCCTTGTCCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
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| CDS CAA 72 bp | CTCCGAAGATTCATCTTTAATATCATCTTGTCGTCTTaGGACAAGGCGGGAAGCTCGCTGTTTGTACAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LRRFIFNIILSS*DKAGSSLFVQL Trigger: CAGCTGTACAAACAGCGAGCTTCCCGCCTTGTCCAAAGACGACAAGATGATATTAAAGATGAATCTTCGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
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| CDS CAA 72 bp | AACTATACGGTATGCCATAGGATGCACCGTAAGGCATaGTCTGGTAGGTGTTCTGGTAGTACACATTCACTT | + |
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Preference number: 6 (lower is better) Translates to: NYTVCHRMHRKA*SGRCSGSTHSL Trigger: AAGTGAATGTGTACTACCAGAACACCTACCAGACAATGCCTTACGGTGCATCCTATGGCATACCGTATAGTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
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| CDS CAA 90 bp | TTCACTGAAACACTCAAGCAAGTCTTGGACATACCCTCGCATTTCTaGCAAAAATTTATACCGTTCACCAATACCCCCAGAAGACCCTTC | + |
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Preference number: 6 (lower is better) Translates to: FTETLKQVLDIPSHF*QKFIPFTNTPRRPF Trigger: GAAGGGTCTTCTGGGGGTATTGGTGAACGGTATAAATTTTTGCAAGAAATGCGAGGGTATGTCCAAGACTTGCTTGAGTGTTTCAGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
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| CDS CAA 72 bp | GTCCACTCGGCTTTGCAGATGTTTTTCATGCTGCTGTaGATTGGTTTTGTGCAATTCTTTCATGGAGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: VHSALQMFFMLL*IGFVQFFHGVQ Trigger: TTGGACTCCATGAAAGAATTGCACAAAACCAATCAACAGCAGCATGAAAAACATCTGCAAAGCCGAGTGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
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| CDS CAA 72 bp | ACACTCAAGCAAGTCTTGGACATACCCTCGCATTTCTaGCAAAAATTTATACCGTTCACCAATACCCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: TLKQVLDIPSHF*QKFIPFTNTPR Trigger: TCTGGGGGTATTGGTGAACGGTATAAATTTTTGCAAGAAATGCGAGGGTATGTCCAAGACTTGCTTGAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023698.12 ENSMUST00000118522.8 |
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| CDS CAA 90 bp | CATGTTCTTGATAAAGTGCCCGATCACGTCCAAAGGAATCAAGATTaGGTGCCATCAAAGCTTTATTTGAATGGCTTGAAAACTCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: HVLDKVPDHVQRNQD*VPSKLYLNGLKTPK Trigger: CTTCGGAGTTTTCAAGCCATTCAAATAAAGCTTTGATGGCACCAAATCTTGATTCCTTTGGACGTGATCGGGCACTTTATCAAGAACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
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| CDS CAA 72 bp | GATAAAGTGCCCGATCACGTCCAAAGGAATCAAGATTaGGTGCCATCAAAGCTTTATTTGAATGGCTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: DKVPDHVQRNQD*VPSKLYLNGLK Trigger: TTTCAAGCCATTCAAATAAAGCTTTGATGGCACCAAATCTTGATTCCTTTGGACGTGATCGGGCACTTTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118522.8 |
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