Pregenerated sensors for PAX9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001497Ensembl transcript IDs: ENSMUST00000001538.10, ENSMUST00000153250.9
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGAATACACACGACCTGGGGCAAGTCCAGGTCCAGGAGCCCAAGTaGCCCACCACCAAACAGAGAAATACATCACCAGCAAGTCACCTT | + |
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Preference number: 1 (lower is better) Translates to: LNTHDLGQVQVQEPK*PTTKQRNTSPASHL Trigger: AAGGTGACTTGCTGGTGATGTATTTCTCTGTTTGGTGGTGGGCCACTTGGGCTCCTGGACCTGGACTTGCCCCAGGTCGTGTGTATTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR TCA 90 bp | GAACAAGTGGGTCTGTGTTGCATGGCTGTTTTCTGTCCTGGAAGGTaGTACACACTAGAGTCCTCTGCAAGAGAGCTAAAGGCACACAAC | + |
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Preference number: 1 (lower is better) Translates to: EQVGLCCMAVFCPGR*YTLESSARELKAHN Trigger: GTTGTGTGCCTTTAGCTCTCTTGCAGAGGACTCTAGTGTGTATCACCTTCCAGGACAGAAAACAGCCATGCAACACAGACCCACTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR CCA 90 bp | GATAGCAGTCCCCACCAAAATATTGGATTGGATCTTAATGCCATTTaGTTACAGCCTGTCTTCTTACCACGCGGGAGGGAACGCGAATTG | + |
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Preference number: 1 (lower is better) Translates to: DSSPHQNIGLDLNAI*LQPVFLPRGREREL Trigger: CAATTCGCGTTCCCTCCCGCGTGGTAAGAAGACAGGCTGTAACCAAATGGCATTAAGATCCAATCCAATATTTTGGTGGGGACTGCTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR CCA 90 bp | TTCAGTCAGATTCTCTGGATAGCAGTCCCCACCAAAATATTGGATTaGATCTTAATGCCATTTGGTTACAGCCTGTCTTCTTACCACGCG | + |
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Preference number: 1 (lower is better) Translates to: FSQILWIAVPTKILD*ILMPFGYSLSSYHA Trigger: CGCGTGGTAAGAAGACAGGCTGTAACCAAATGGCATTAAGATCCAATCCAATATTTTGGTGGGGACTGCTATCCAGAGAATCTGACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR GCA 90 bp | ATAATCCTCTTTGTAGCAACGAGTGTTGGTTGCTTTAGAAAGAAATaGAGCATGAAGCTCTCTATAAGAAATTTCATAAGACAACTCTCT | + |
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Preference number: 1 (lower is better) Translates to: IILFVATSVGCFRKK*SMKLSIRNFIRQLS Trigger: AGAGAGTTGTCTTATGAAATTTCTTATAGAGAGCTTCATGCTGCATTTCTTTCTAAAGCAACCAACACTCGTTGCTACAAAGAGGATTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR GCA 90 bp | TCTTCTCCTAAAGTTATAATCCTCTTTGTAGCAACGAGTGTTGGTTaGTTTAGAAAGAAATGCAGCATGAAGCTCTCTATAAGAAATTTC | + |
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Preference number: 1 (lower is better) Translates to: SSPKVIILFVATSVG*FRKKCSMKLSIRNF Trigger: GAAATTTCTTATAGAGAGCTTCATGCTGCATTTCTTTCTAAAGCAACCAACACTCGTTGCTACAAAGAGGATTATAACTTTAGGAGAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGAGCCCAAGTGGCCCACCACCAAACAGAGAAATACATCACCAGCAAGTCTGGAGGGGTGGGGTGTaGCGAGAGGGAGGATGTGCT | + |
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Preference number: 2 (lower is better) Translates to: SRSPSGPPPNREIHHQQVWRGGV*REGGCA Trigger: AGCACATCCTCCCTCTCGTCACACCCCACCCCTCCA...GACTTGCTGGTGATGTATTTCTCTGTTTGGTGGTGGGCCACTTGGGCTCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR CCA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGAGGGAAGACCGGAAGTaGGGCTGCCGGAGTGGACGC | + |
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Preference number: 2 (lower is better) Translates to: FPVDLPLSIRDLERGARMREDRK*GCRSGR Trigger: GCGTCCACTCCGGCAGCCCCACTTCCGGTCTTCCCT...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR CCA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGGGACCACTGGAGGGGTaGGGTGTGACGAGAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: FPVDLPLSIRDLERGARMGPLEG*GVTRGR Trigger: CCTCCCTCTCGTCACACCCCACCCCTCCAGTGGTCC...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR CCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCGGACCACTGGAGGGGTaGGGTGTGACGAGAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: NYEECMCQLRKCSPLRRSGPLEG*GVTRGR Trigger: CCTCCCTCTCGTCACACCCCACCCCTCCAGTGGTCC...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR GCA 90 bp | TCCAGGAGCCCAAGTGGCCCACCACCAAACAGAGAAATACATCACCAGCAAGTCTGTGTTAAAACAGTGTaGGGGCAACACAAATGCCTC | + |
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Preference number: 2 (lower is better) Translates to: SRSPSGPPPNREIHHQQVCVKTV*GQHKCL Trigger: GAGGCATTTGTGTTGCCCGCACACTGTTTTAACACA...GACTTGCTGGTGATGTATTTCTCTGTTTGGTGGTGGGCCACTTGGGCTCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGAAGCCTCTACTGAATACACACGACCTGGGGCAAGTCCAGGTCCAGGAGCCCAAAATCTCAACAATTaGACGTTTCGAAAGTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: AEASTEYTRPGASPGPGAQNLNN*TFRKFR Trigger: CCTGAACTTTCGAAACGTGCAATTGTTGAGATTTTG...GGCTCCTGGACCTGGACTTGCCCCAGGTCGTGTGTATTCAGTAGAGGCTTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR CCA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGAGGTGTTGGTGTTGGTaGAGGGGTACCCCGTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: FPVDLPLSIRDLERGARMRCWCW*RGTPWN Trigger: GTTCCACGGGGTACCCCTCCACCAACACCAACACCT...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR CCA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGGTCCAGGAGCCCAAGTaGCCCACCACCAAACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: FPVDLPLSIRDLERGARMVQEPK*PTTKQR Trigger: TCTCTGTTTGGTGGTGGGCCACTTGGGCTCCTGGAC...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR CCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCGTCCAGGAGCCCAAGTaGCCCACCACCAAACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: NYEECMCQLRKCSPLRRSVQEPK*PTTKQR Trigger: TCTCTGTTTGGTGGTGGGCCACTTGGGCTCCTGGAC...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR TCA 90 bp | CACAGCAAGCCATTGTTACTACATTCATTAGAGAAGAGTTCTCCATCTCCTTTTTGGAGGGGTGGGGTGTaGCGAGAGGGAGGATGTGCT | + |
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Preference number: 2 (lower is better) Translates to: HSKPLLLHSLEKSSPSPFWRGGV*REGGCA Trigger: AGCACATCCTCCCTCTCGTCACACCCCACCCCTCCA...AAAAGGAGATGGAGAACTCTTCTCTAATGAATGTAGTAACAATGGCTTGCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR CCA 90 bp | ACGAGTGTTGGTTGCTTTAGAAAGAAATGCAGCATGAAGCTCTCTATAAGAAATAGGGAAGACCGGAAGTaGGGCTGCCGGAGTGGACGC | + |
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Preference number: 2 (lower is better) Translates to: TSVGCFRKKCSMKLSIRNREDRK*GCRSGR Trigger: GCGTCCACTCCGGCAGCCCCACTTCCGGTCTTCCCT...ATTTCTTATAGAGAGCTTCATGCTGCATTTCTTTCTAAAGCAACCAACACTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGAAGCCTCTACTGAATACACACGACCTGGGGCAAGTCCAGGTCCAGGAGCCATAAATATACAGGTGTaGTTTTACCAAAGACAGACC | + |
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Preference number: 2 (lower is better) Translates to: AEASTEYTRPGASPGPGAINIQV*FYQRQT Trigger: GGTCTGTCTTTGGTAAAACCACACCTGTATATTTAT...GGCTCCTGGACCTGGACTTGCCCCAGGTCGTGTGTATTCAGTAGAGGCTTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR CCA 90 bp | CACAGCAAGCCATTGTTACTACATTCATTAGAGAAGAGTTCTCCATCTCCTTTTAGGTGTTGGTGTTGGTaGAGGGGTACCCCGTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: HSKPLLLHSLEKSSPSPFRCWCW*RGTPWN Trigger: GTTCCACGGGGTACCCCTCCACCAACACCAACACCT...AAAAGGAGATGGAGAACTCTTCTCTAATGAATGTAGTAACAATGGCTTGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR GCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCTGCGGGCAACACAAATaGCTCATTCCACCTTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: NYEECMCQLRKCSPLRRSCGQHK*LIPPLE Trigger: CTCTAAAGGTGGAATGAGGCATTTGTGTTGCCCGCA...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR CAA 90 bp | CTTCAGTCAGATTCTCTGGATAGCAGTCCCCACCAAAATATTGGATaGGATCTTAATGCCATTTGGTTACAGCCTGTCTTCTTACCACGC | + |
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Preference number: 2 (lower is better) Translates to: LQSDSLDSSPHQNIG*DLNAIWLQPVFLPR Trigger: GCGTGGTAAGAAGACAGGCTGTAACCAAATGGCATTAAGATCCAATCCAATATTTTGGTGGGGACTGCTATCCAGAGAATCTGACTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR CCA 90 bp | ATTAGATATAGAATAATTCTGTGCCTTCAGTCAGATTCTCTGGATAGCAGTCCCCACCTAGTTGGGCAGTaGTGGCGCATGCCTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: IRYRIILCLQSDSLDSSPHLVGQ*WRMPLI Trigger: GATTAAAGGCATGCGCCACCACTGCCCAACTAGGTG...GGGACTGCTATCCAGAGAATCTGACTGAAGGCACAGAATTATTCTATATCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR CCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCAGAGTTGATCAGCTCTaGCTCCTTCTGCTTACTCTT | + |
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Preference number: 2 (lower is better) Translates to: NYEECMCQLRKCSPLRRSRVDQL*LLLLTL Trigger: AAGAGTAAGCAGAAGGAGCCAGAGCTGATCAACTCT...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR CAA 90 bp | TGTGCCTTCAGTCAGATTCTCTGGATAGCAGTCCCCACCAAAATATaGGATTGGATCTTAATGCCATTTGGTTACAGCCTGTCTTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: CAFSQILWIAVPTKI*DWILMPFGYSLSSY Trigger: GTAAGAAGACAGGCTGTAACCAAATGGCATTAAGATCCAATCCAATATTTTGGTGGGGACTGCTATCCAGAGAATCTGACTGAAGGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGTCAGCACAAAGATTATaGATCCATGAAGCCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: FPVDLPLSIRDLERGARMSAQRL*IHEASS Trigger: AGAGCTGGCTTCATGGATTCATAATCTTTGTGCTGA...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGCATGGTCACACACATTaGATGTCCTATAGCTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: FPVDLPLSIRDLERGARMHGHTH*MSYSSV Trigger: AACAGAGCTATAGGACATGCAATGTGTGTGACCATG...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR GCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCGAAGTGGCTATGAATTaGCAACACGGTTTTCCATTG | + |
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Preference number: 2 (lower is better) Translates to: NYEECMCQLRKCSPLRRSEVAMN*QHGFPL Trigger: CAATGGAAAACCGTGTTGGCAATTCATAGCCACTTC...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR CAA 90 bp | GTGTGCGGGCAACACAAATGCCTCATTCCACCTTTAGAGTTGCTTTaGTTTTTAAATCCTAAAGTTATGCCAGGTTTCCTGGAAAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: VCGQHKCLIPPLELL*FLNPKVMPGFLEKG Trigger: TCCCTTTTCCAGGAAACCTGGCATAACTTTAGGATTTAAAAACAAAAGCAACTCTAAAGGTGGAATGAGGCATTTGTGTTGCCCGCACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR TCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCAAAAAGTATCCTTCATaGGATGCTGAAGCCTCTACT | + |
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Preference number: 2 (lower is better) Translates to: NYEECMCQLRKCSPLRRSKKYPS*DAEAST Trigger: AGTAGAGGCTTCAGCATCTCATGAAGGATACTTTTT...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGTTGTTGTCCTGTGCTTaGCATATGTGTTGTTTGACT | + |
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Preference number: 2 (lower is better) Translates to: FPVDLPLSIRDLERGARMLLSCA*HMCCLT Trigger: AGTCAAACAACACATATGTCAAGCACAGGACAACAA...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR CAA 90 bp | CGCGAAACATGCTTCAGTACGCACTGTAAACTTCACAGCAAGCCATaGTTACTACATTCATTAGAGAAGAGTTCTCCATCTCCTTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: RETCFSTHCKLHSKP*LLHSLEKSSPSPFK Trigger: CTTAAAAGGAGATGGAGAACTCTTCTCTAATGAATGTAGTAACAATGGCTTGCTGTGAAGTTTACAGTGCGTACTGAAGCATGTTTCGCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR GCA 90 bp | ATTAGATATAGAATAATTCTGTGCCTTCAGTCAGATTCTCTGGATAGCAGTCCCTGTGTTAAAACAGTGTaGGGGCAACACAAATGCCTC | + |
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Preference number: 2 (lower is better) Translates to: IRYRIILCLQSDSLDSSPCVKTV*GQHKCL Trigger: GAGGCATTTGTGTTGCCCGCACACTGTTTTAACACA...GGGACTGCTATCCAGAGAATCTGACTGAAGGCACAGAATTATTCTATATCTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR GCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCATTTTAACCCTATTTTaGCAAGCAGCAGAAGGAATG | + |
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Preference number: 2 (lower is better) Translates to: NYEECMCQLRKCSPLRRSILTLF*QAAEGM Trigger: CATTCCTTCTGCTGCTTGGCAAAATAGGGTTAAAAT...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR CAA 90 bp | GTTCTCCATCTCCTTTTAAGTTATCAGACAAATGTGGGGCTGAGATaGCTGAACACACAGGTAAGCCAACAACAACAGTACAATTTCATT | + |
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Preference number: 2 (lower is better) Translates to: VLHLLLSYQTNVGLR*LNTQVSQQQQYNFI Trigger: AATGAAATTGTACTGTTGTTGTTGGCTTACCTGTGTGTTCAGCAATCTCAGCCCCACATTTGTCTGATAACTTAAAAGGAGATGGAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGCTTTTTGTTGTCCTGTaGTTGACATATGTGTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: FPVDLPLSIRDLERGARMLFVVL*LTYVLF Trigger: AAACAACACATATGTCAAGCACAGGACAACAAAAAG...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGTGCTTTAGAAAGAAATaGAGCATGAAGCTCTCTATA | + |
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Preference number: 2 (lower is better) Translates to: FPVDLPLSIRDLERGARMCFRKK*SMKLSI Trigger: TATAGAGAGCTTCATGCTGCATTTCTTTCTAAAGCA...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR CCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCAAACATATAATCACATaGTCACACACATTGCATGTC | + |
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Preference number: 2 (lower is better) Translates to: NYEECMCQLRKCSPLRRSKHIIT*SHTLHV Trigger: GACATGCAATGTGTGTGACCATGTGATTATATGTTT...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR TCA 90 bp | ATTAGATATAGAATAATTCTGTGCCTTCAGTCAGATTCTCTGGATAGCAGTCCCAAAAAGTATCCTTCATaGGATGCTGAAGCCTCTACT | + |
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Preference number: 2 (lower is better) Translates to: IRYRIILCLQSDSLDSSPKKYPS*DAEAST Trigger: AGTAGAGGCTTCAGCATCTCATGAAGGATACTTTTT...GGGACTGCTATCCAGAGAATCTGACTGAAGGCACAGAATTATTCTATATCTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR TCA 90 bp | CACAGCAAGCCATTGTTACTACATTCATTAGAGAAGAGTTCTCCATCTCCTTTTTTGTTGTCCTGTGCTTaGCATATGTGTTGTTTGACT | + |
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Preference number: 2 (lower is better) Translates to: HSKPLLLHSLEKSSPSPFLLSCA*HMCCLT Trigger: AGTCAAACAACACATATGTCAAGCACAGGACAACAA...AAAAGGAGATGGAGAACTCTTCTCTAATGAATGTAGTAACAATGGCTTGCTGTG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR GCA 90 bp | ATTAGATATAGAATAATTCTGTGCCTTCAGTCAGATTCTCTGGATAGCAGTCCCTTCCTTAAATACAGCTaGATATCACCTAGTTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: IRYRIILCLQSDSLDSSPFLKYS*ISPSWA Trigger: TGCCCAACTAGGTGATATGCAGCTGTATTTAAGGAA...GGGACTGCTATCCAGAGAATCTGACTGAAGGCACAGAATTATTCTATATCTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR CCA 72 bp | CACGACCTGGGGCAAGTCCAGGTCCAGGAGCCCAAGTaGCCCACCACCAAACAGAGAAATACATCACCAGCA | + |
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Preference number: 3 (lower is better) Translates to: HDLGQVQVQEPK*PTTKQRNTSPA Trigger: TGCTGGTGATGTATTTCTCTGTTTGGTGGTGGGCCACTTGGGCTCCTGGACCTGGACTTGCCCCAGGTCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR CAA 90 bp | GCTGAAGCCTCTACTGAATACACACGACCTGGGGCAAGTCCAGGTCCAGGAGCCTGTTCCATAAGCCCTTaGAGGGGGATAGGTTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: AEASTEYTRPGASPGPGACSISP*RGIGFF Trigger: GAAGAAACCTATCCCCCTCAAAGGGCTTATGGAACA...GGCTCCTGGACCTGGACTTGCCCCAGGTCGTGTGTATTCAGTAGAGGCTTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR CCA 72 bp | TCTTCTTACCACGCGGGAGGGAACGCGAATTGTCAGTaGGGAGTTTTACAACATCGAAGGGCTTCTATGGCC | + |
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Preference number: 3 (lower is better) Translates to: SSYHAGGNANCQ*GVLQHRRASMA Trigger: GGCCATAGAAGCCCTTCGATGTTGTAAAACTCCCCACTGACAATTCGCGTTCCCTCCCGCGTGGTAAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| 3UTR-3UTR CAA 90 bp | TCCAGGAGCCCAAGTGGCCCACCACCAAACAGAGAAATACATCACCAGCAAGTCGATAAAAGAGAGGTGTaGGTGTTGGTGGAGGGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: SRSPSGPPPNREIHHQQVDKREV*VLVEGY Trigger: GTACCCCTCCACCAACACCAACACCTCTCTTTTATC...GACTTGCTGGTGATGTATTTCTCTGTTTGGTGGTGGGCCACTTGGGCTCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAAGCCTCTACTGAATACACACGACCTGGGGCAAGTCCAGGTCCAGGAGCCGCAAAATCTCAACAATaGCACGTTTCGAAAGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: AEASTEYTRPGASPGPGAAKSQQ*HVSKVQ Trigger: CTGAACTTTCGAAACGTGCAATTGTTGAGATTTTGC...GGCTCCTGGACCTGGACTTGCCCCAGGTCGTGTGTATTCAGTAGAGGCTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGAGAGAGGTGTTGGTGTaGGTGGAGGGGTACCCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: FPVDLPLSIRDLERGARMREVLV*VEGYPV Trigger: CACGGGGTACCCCTCCACCAACACCAACACCTCTCT...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR-3UTR CAA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCAGAGAGGTGTTGGTGTaGGTGGAGGGGTACCCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: NYEECMCQLRKCSPLRRSREVLV*VEGYPV Trigger: CACGGGGTACCCCTCCACCAACACCAACACCTCTCT...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR TCA 72 bp | AAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTaGGGAGGAGCTAGTGTCTGGAGGAGGCTGGTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: KSACANLENVPL*GGASVWRRLVL Trigger: TAACACCAGCCTCCTCCAGACACTAGCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR CCA 72 bp | AAAGAGAGGTGTTGGTGTTGGTGGAGGGGTACCCCGTaGAACGAAGACATCCACATCCATATTTACAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: KERCWCWWRGTP*NEDIHIHIYKV Trigger: GACCTTGTAAATATGGATGTGGATGTCTTCGTTCCACGGGGTACCCCTCCACCAACACCAACACCTCTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR TCA 72 bp | TTTACAACATCGAAGGGCTTCTATGGCCCTGAGAGTTaGTCAGCTCTGGCTCCTTCTGCTTACTCTTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FTTSKGFYGPES*SALAPSAYSSP Trigger: AGGAGAAGAGTAAGCAGAAGGAGCCAGAGCTGATCAACTCTCAGGGCCATAGAAGCCCTTCGATGTTGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR TCA 72 bp | GGTCTGTGTTGCATGGCTGTTTTCTGTCCTGGAAGGTaGTACACACTAGAGTCCTCTGCAAGAGAGCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLCCMAVFCPGR*YTLESSARELK Trigger: CTTTAGCTCTCTTGCAGAGGACTCTAGTGTGTATCACCTTCCAGGACAGAAAACAGCCATGCAACACAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGAATGTGGGGCTGAGATaGCTGAACACACAGGTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: FPVDLPLSIRDLERGARMNVGLR*LNTQVS Trigger: GCTTACCTGTGTGTTCAGCAATCTCAGCCCCACATT...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR CCA 72 bp | CCCCACCAAAATATTGGATTGGATCTTAATGCCATTTaGTTACAGCCTGTCTTCTTACCACGCGGGAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PHQNIGLDLNAI*LQPVFLPRGRE Trigger: TTCCCTCCCGCGTGGTAAGAAGACAGGCTGTAACCAAATGGCATTAAGATCCAATCCAATATTTTGGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR-3UTR CAA 90 bp | CACAGCAAGCCATTGTTACTACATTCATTAGAGAAGAGTTCTCCATCTCCTTTTGATAAAAGAGAGGTGTaGGTGTTGGTGGAGGGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: HSKPLLLHSLEKSSPSPFDKREV*VLVEGY Trigger: GTACCCCTCCACCAACACCAACACCTCTCTTTTATC...AAAAGGAGATGGAGAACTCTTCTCTAATGAATGTAGTAACAATGGCTTGCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGGCAAAATCTCAACAATaGCACGTTTCGAAAGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FPVDLPLSIRDLERGARMAKSQQ*HVSKVQ Trigger: CTGAACTTTCGAAACGTGCAATTGTTGAGATTTTGC...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGACCAGCAAGTCACCTTaGCAAAGGAAGAAAGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: FPVDLPLSIRDLERGARMTSKSP*QRKKDK Trigger: TTTATCTTTCTTCCTTTGCAAAGGTGACTTGCTGGT...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR-3UTR CAA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCTTTGTTGTCCTGTGCTaGACATATGTGTTGTTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: NYEECMCQLRKCSPLRRSFVVLC*TYVLFD Trigger: GTCAAACAACACATATGTCAAGCACAGGACAACAAA...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGACTTCTGTTAGAGGATaGCAGTACAGGTATGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: FPVDLPLSIRDLERGARMTSVRG*QYRYVT Trigger: TGTAACATACCTGTACTGCAATCCTCTAACAGAAGT...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR GCA 72 bp | GCAGTACAGGTATGTTACAGCCTTTTTGTTGTCCTGTaGTTGACATATGTGTTGTTTGACTGGGATACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: AVQVCYSLFVVL*LTYVLFDWDTN Trigger: GTTTGTATCCCAGTCAAACAACACATATGTCAAGCACAGGACAACAAAAAGGCTGTAACATACCTGTACTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR-3UTR CAA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCAATTTTAACCCTATTTaGCCAAGCAGCAGAAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: NYEECMCQLRKCSPLRRSNFNPI*PSSRRN Trigger: ATTCCTTCTGCTGCTTGGCAAAATAGGGTTAAAATT...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTAGATATAGAATAATTCTGTGCCTTCAGTCAGATTCTCTGGATAGCAGTCCCCTTCACAGCAAGCCATaGTTACTACATTCATTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IRYRIILCLQSDSLDSSPLHSKP*LLHSLE Trigger: CTCTAATGAATGTAGTAACAATGGCTTGCTGTGAAG...GGGACTGCTATCCAGAGAATCTGACTGAAGGCACAGAATTATTCTATATCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR-3UTR CAA 90 bp | ACGAGTGTTGGTTGCTTTAGAAAGAAATGCAGCATGAAGCTCTCTATAAGAAATAATTTTAACCCTATTTaGCCAAGCAGCAGAAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TSVGCFRKKCSMKLSIRNNFNPI*PSSRRN Trigger: ATTCCTTCTGCTGCTTGGCAAAATAGGGTTAAAATT...ATTTCTTATAGAGAGCTTCATGCTGCATTTCTTTCTAAAGCAACCAACACTCGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR GCA 72 bp | TTTGTAGCAACGAGTGTTGGTTGCTTTAGAAAGAAATaGAGCATGAAGCTCTCTATAAGAAATTTCATAAGA | + |
|
Preference number: 3 (lower is better) Translates to: FVATSVGCFRKK*SMKLSIRNFIR Trigger: TCTTATGAAATTTCTTATAGAGAGCTTCATGCTGCATTTCTTTCTAAAGCAACCAACACTCGTTGCTACAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR TCA 90 bp | TGGACCACTGGAGGGGTGGGGTGTGACGAGAGGGAGGATGTGCTAGGAGGGAAGATGTCCGTGACGGAGTaGGAGGAGGGCCAGGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WTTGGVGCDEREDVLGGKMSVTE*EEGQVR Trigger: GCGCACCTGGCCCTCCTCTCACTCCGTCACGGACAT...CTTCCCTCCTAGCACATCCTCCCTCTCGTCACACCCCACCCCTCCAGTGGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | TGGACCACTGGAGGGGTGGGGTGTGACGAGAGGGAGGATGTGCTAGGAGGGAAGCGGCAGGGAAGTTGTTaGGGCCCAGGCTGCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: WTTGGVGCDEREDVLGGKRQGSC*GPGCST Trigger: AGTGGAGCAGCCTGGGCCGCAACAACTTCCCTGCCG...CTTCCCTCCTAGCACATCCTCCCTCTCGTCACACCCCACCCCTCCAGTGGTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | GCTGAAGCCTCTACTGAATACACACGACCTGGGGCAAGTCCAGGTCCAGGAGCCCTCCAATCCATTCACTaGGTGCGGGGCGGCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AEASTEYTRPGASPGPGALQSIH*VRGGGR Trigger: CCTGCCGCCGCCCCGCACGCAGTGAATGGATTGGAG...GGCTCCTGGACCTGGACTTGCCCCAGGTCGTGTGTATTCAGTAGAGGCTTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | TGGACCACTGGAGGGGTGGGGTGTGACGAGAGGGAGGATGTGCTAGGAGGGAAGGAAGCCGAATGGCGTTaGGCAGCGGCCTTCCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WTTGGVGCDEREDVLGGKEAEWR*AAAFRS Trigger: TGAACGGAAGGCCGCTGCCCAACGCCATTCGGCTTC...CTTCCCTCCTAGCACATCCTCCCTCTCGTCACACCCCACCCCTCCAGTGGTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | TGGACCACTGGAGGGGTGGGGTGTGACGAGAGGGAGGATGTGCTAGGAGGGAAGGTGCCTGGCCGTACTTaGCTTCCTGCTCCAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WTTGGVGCDEREDVLGGKVPGRT*LPAPRL Trigger: GAGCCTTGGAGCAGGAAGCCAAGTACGGCCAGGCAC...CTTCCCTCCTAGCACATCCTCCCTCTCGTCACACCCCACCCCTCCAGTGGTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR TCA 90 bp | TGGACCACTGGAGGGGTGGGGTGTGACGAGAGGGAGGATGTGCTAGGAGGGAAGTCACTCCTTGGTCGGTaGTGGAGCGGATGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WTTGGVGCDEREDVLGGKSLLGR*WSGCPE Trigger: TTCTGGGCATCCGCTCCATCACCGACCAAGGAGTGA...CTTCCCTCCTAGCACATCCTCCCTCTCGTCACACCCCACCCCTCCAGTGGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | GCTGAAGCCTCTACTGAATACACACGACCTGGGGCAAGTCCAGGTCCAGGAGCCCGGCAGGGAAGTTGTTaGGGCCCAGGCTGCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: AEASTEYTRPGASPGPGARQGSC*GPGCST Trigger: AGTGGAGCAGCCTGGGCCGCAACAACTTCCCTGCCG...GGCTCCTGGACCTGGACTTGCCCCAGGTCGTGTGTATTCAGTAGAGGCTTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | GCTGAAGCCTCTACTGAATACACACGACCTGGGGCAAGTCCAGGTCCAGGAGCCCGATGCGAAGCCGAATaGCGTTGGGCAGCGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AEASTEYTRPGASPGPGARCEAE*RWAAAF Trigger: GAAGGCCGCTGCCCAACGCCATTCGGCTTCGCATCG...GGCTCCTGGACCTGGACTTGCCCCAGGTCGTGTGTATTCAGTAGAGGCTTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | TGGACCACTGGAGGGGTGGGGTGTGACGAGAGGGAGGATGTGCTAGGAGGGAAGGGAATGTCACAGTTGTaGGGGGACAGTGGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WTTGGVGCDEREDVLGGKGMSQL*GDSGVL Trigger: CAGCACCCCACTGTCCCCCCACAACTGTGACATTCC...CTTCCCTCCTAGCACATCCTCCCTCTCGTCACACCCCACCCCTCCAGTGGTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR TCA 90 bp | TGGACCACTGGAGGGGTGGGGTGTGACGAGAGGGAGGATGTGCTAGGAGGGAAGAGCCATGCTGGATGCTaGGACGAAACTGCTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: WTTGGVGCDEREDVLGGKSHAGC*DETAHS Trigger: GCTGTGAGCAGTTTCGTCTCAGCATCCAGCATGGCT...CTTCCCTCCTAGCACATCCTCCCTCTCGTCACACCCCACCCCTCCAGTGGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR TCA 90 bp | TGGACCACTGGAGGGGTGGGGTGTGACGAGAGGGAGGATGTGCTAGGAGGGAAGGTAGGTCATGTAGGGTaGCACTTGGGCTGGTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: WTTGGVGCDEREDVLGGKVGHVG*HLGWCR Trigger: CCTACACCAGCCCAAGTGTCACCCTACATGACCTAC...CTTCCCTCCTAGCACATCCTCCCTCTCGTCACACCCCACCCCTCCAGTGGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | GCTGAAGCCTCTACTGAATACACACGACCTGGGGCAAGTCCAGGTCCAGGAGCCCGGTCACAGAATGGCTaGCTTCCCTGGCTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AEASTEYTRPGASPGPGARSQNG*LPWLPA Trigger: TGCAGGCAGCCAGGGAAGGCAGCCATTCTGTGACCG...GGCTCCTGGACCTGGACTTGCCCCAGGTCGTGTGTATTCAGTAGAGGCTTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | GCTGAAGCCTCTACTGAATACACACGACCTGGGGCAAGTCCAGGTCCAGGAGCCCTGTCGCTCACTCCTTaGTCGGTGATGGAGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AEASTEYTRPGASPGPGALSLTP*SVMERM Trigger: CATCCGCTCCATCACCGACCAAGGAGTGAGCGACAG...GGCTCCTGGACCTGGACTTGCCCCAGGTCGTGTGTATTCAGTAGAGGCTTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGGAGCCCAAGTGGCCCACCACCAAACAGAGAAATACATCACCAGCAAGTCGGGACAGTGGGGTGCTaGCGGCATGTTGCCACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRSPSGPPPNREIHHQQVGTVGC*RHVATH Trigger: ATGGGTGGCAACATGCCGGCAGCACCCCACTGTCCC...GACTTGCTGGTGATGTATTTCTCTGTTTGGTGGTGGGCCACTTGGGCTCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | GCTGAAGCCTCTACTGAATACACACGACCTGGGGCAAGTCCAGGTCCAGGAGCCGGTCGGATGCCCAGTTaGGCTAATTCCACGATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: AEASTEYTRPGASPGPGAGRMPS*ANSTMR Trigger: TCGCATCGTGGAATTAGCCCAACTGGGCATCCGACC...GGCTCCTGGACCTGGACTTGCCCCAGGTCGTGTGTATTCAGTAGAGGCTTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGGAGCCCAAGTGGCCCACCACCAAACAGAGAAATACATCACCAGCAAGTCGTGCTGCCGGCATGTTaGCACCCATGTCCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SRSPSGPPPNREIHHQQVVLPAC*HPCPAT Trigger: TGTGGCTGGACATGGGTGGCAACATGCCGGCAGCAC...GACTTGCTGGTGATGTATTTCTCTGTTTGGTGGTGGGCCACTTGGGCTCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGGAGCCCAAGTGGCCCACCACCAAACAGAGAAATACATCACCAGCAAGTCGAAGCCGAATGGCGTTaGGCAGCGGCCTTCCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRSPSGPPPNREIHHQQVEAEWR*AAAFRS Trigger: TGAACGGAAGGCCGCTGCCCAACGCCATTCGGCTTC...GACTTGCTGGTGATGTATTTCTCTGTTTGGTGGTGGGCCACTTGGGCTCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | GCTGAAGCCTCTACTGAATACACACGACCTGGGGCAAGTCCAGGTCCAGGAGCCGGTAAGGAGCCATGCTaGATGCTGAGACGAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: AEASTEYTRPGASPGPGAGKEPC*MLRRNC Trigger: GCAGTTTCGTCTCAGCATCCAGCATGGCTCCTTACC...GGCTCCTGGACCTGGACTTGCCCCAGGTCGTGTGTATTCAGTAGAGGCTTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | GCTGAAGCCTCTACTGAATACACACGACCTGGGGCAAGTCCAGGTCCAGGAGCCCTTGAAAGCCAGCGATaGGGGAATGTCACAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AEASTEYTRPGASPGPGALESQR*GNVTVV Trigger: CACAACTGTGACATTCCCGCATCGCTGGCTTTCAAG...GGCTCCTGGACCTGGACTTGCCCCAGGTCGTGTGTATTCAGTAGAGGCTTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR TCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCCCCGTAGCTGGCGGCTaGTGTCACAAGGTCGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: NYEECMCQLRKCSPLRRSPVAGG*CHKVGC Trigger: GCATCCGACCTTGTGACATCAGCCGCCAGCTACGGG...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCAATCCATTCACTGCGTaGGGGGCGGCGGCAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NYEECMCQLRKCSPLRRSNPFTA*GAAAGK Trigger: CTTCCCTGCCGCCGCCCCGCACGCAGTGAATGGATT...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCGGGACAGTGGGGTGCTaGCGGCATGTTGCCACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NYEECMCQLRKCSPLRRSGTVGC*RHVATH Trigger: ATGGGTGGCAACATGCCGGCAGCACCCCACTGTCCC...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGGAGCCCAAGTGGCCCACCACCAAACAGAGAAATACATCACCAGCAAGTCCTTGAAAGCCAGCGATaGGGGAATGTCACAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRSPSGPPPNREIHHQQVLESQR*GNVTVV Trigger: CACAACTGTGACATTCCCGCATCGCTGGCTTTCAAG...GACTTGCTGGTGATGTATTTCTCTGTTTGGTGGTGGGCCACTTGGGCTCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGGGATAGGTTTCTTCTCTGTGTTAAAACAGTGTGCGGGCAACACAAATGCGCTGCCTTCCCTGGCTaGCTGCATTCCCTTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGDRFLLCVKTVCGQHKCAAFPG*LHSLES Trigger: GCTTTCAAGGGAATGCAGGCAGCCAGGGAAGGCAGC...GCATTTGTGTTGCCCGCACACTGTTTTAACACAGAGAAGAAACCTATCCCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGGGATAGGTTTCTTCTCTGTGTTAAAACAGTGTGCGGGCAACACAAATGCTGCGAGACCCGTAGCTaGCGGCTGATGTCACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGDRFLLCVKTVCGQHKCCETRS*RLMSQG Trigger: ACCTTGTGACATCAGCCGCCAGCTACGGGTCTCGCA...GCATTTGTGTTGCCCGCACACTGTTTTAACACAGAGAAGAAACCTATCCCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR TCA 90 bp | GAGGGGGATAGGTTTCTTCTCTGTGTTAAAACAGTGTGCGGGCAACACAAATGCAGCCATGCTGGATGCTaGGACGAAACTGCTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGDRFLLCVKTVCGQHKCSHAGC*DETAHS Trigger: GCTGTGAGCAGTTTCGTCTCAGCATCCAGCATGGCT...GCATTTGTGTTGCCCGCACACTGTTTTAACACAGAGAAGAAACCTATCCCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR TCA 90 bp | GAGGGGGATAGGTTTCTTCTCTGTGTTAAAACAGTGTGCGGGCAACACAAATGCGTAGGTCATGTAGGGTaGCACTTGGGCTGGTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGDRFLLCVKTVCGQHKCVGHVG*HLGWCR Trigger: CCTACACCAGCCCAAGTGTCACCCTACATGACCTAC...GCATTTGTGTTGCCCGCACACTGTTTTAACACAGAGAAGAAACCTATCCCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGGGATAGGTTTCTTCTCTGTGTTAAAACAGTGTGCGGGCAACACAAATGCCCTGCTGGGCCAAGTTaGCGATCTTGTTGCGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGDRFLLCVKTVCGQHKCPAGPS*RSCCAE Trigger: TTCTGCGCAACAAGATCGGCAACTTGGCCCAGCAGG...GCATTTGTGTTGCCCGCACACTGTTTTAACACAGAGAAGAAACCTATCCCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGGGATAGGTTTCTTCTCTGTGTTAAAACAGTGTGCGGGCAACACAAATGCGGTCGGATGCCCAGTTaGGCTAATTCCACGATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: EGDRFLLCVKTVCGQHKCGRMPS*ANSTMR Trigger: TCGCATCGTGGAATTAGCCCAACTGGGCATCCGACC...GCATTTGTGTTGCCCGCACACTGTTTTAACACAGAGAAGAAACCTATCCCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGGTGCCTGGCCGTACTTaGCTTCCTGCTCCAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FPVDLPLSIRDLERGARMVPGRT*LPAPRL Trigger: GAGCCTTGGAGCAGGAAGCCAAGTACGGCCAGGCAC...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR CAA 72 bp | GAACAGAGAGCCAGGAGCAGAACAAGTGGGTCTGTGTaGCATGGCTGTTTTCTGTCCTGGAAGGTGATACAC | + |
|
Preference number: 4 (lower is better) Translates to: EQRARSRTSGSV*HGCFLSWKVIH Trigger: GTGTATCACCTTCCAGGACAGAAAACAGCCATGCAACACAGACCCACTTGTTCTGCTCCTGGCTCTCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR TCA 90 bp | GAGGGGGATAGGTTTCTTCTCTGTGTTAAAACAGTGTGCGGGCAACACAAATGCCTGGTGCTGCTTGTATaGGTCGTAATGACCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGDRFLLCVKTVCGQHKCLVLLV*VVMTLL Trigger: CAGCAGGGTCATTACGACTCATACAAGCAGCACCAG...GCATTTGTGTTGCCCGCACACTGTTTTAACACAGAGAAGAAACCTATCCCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR TCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCTCACTCCTTGGTCGGTaGTGGAGCGGATGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NYEECMCQLRKCSPLRRSSLLGR*WSGCPE Trigger: TTCTGGGCATCCGCTCCATCACCGACCAAGGAGTGA...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR TCA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGCTGCCTGCATTCCCTTaGAAGCCAGCGATGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FPVDLPLSIRDLERGARMLPAFP*KPAMRE Trigger: TTCCCGCATCGCTGGCTTTCAAGGGAATGCAGGCAG...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR TCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCCTGCCTGCATTCCCTTaGAAGCCAGCGATGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NYEECMCQLRKCSPLRRSLPAFP*KPAMRE Trigger: TTCCCGCATCGCTGGCTTTCAAGGGAATGCAGGCAG...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | CACAGCAAGCCATTGTTACTACATTCATTAGAGAAGAGTTCTCCATCTCCTTTTCTCCAATCCATTCACTaGGTGCGGGGCGGCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSKPLLLHSLEKSSPSPFLQSIH*VRGGGR Trigger: CCTGCCGCCGCCCCGCACGCAGTGAATGGATTGGAG...AAAAGGAGATGGAGAACTCTTCTCTAATGAATGTAGTAACAATGGCTTGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGCCGTACTTGGCTTCCTaGTCCAAGGCTCCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPVDLPLSIRDLERGARMPYLAS*SKAPFS Trigger: GGAGAAGGGAGCCTTGGAGCAGGAAGCCAAGTACGG...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCCCTTCCCTGGCTGCCTaGATTCCCTTGAAAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NYEECMCQLRKCSPLRRSPSLAA*IPLKAS Trigger: GCTGGCTTTCAAGGGAATGCAGGCAGCCAGGGAAGG...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGCCTTCCCTGGCTGCCTaGATTCCCTTGAAAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPVDLPLSIRDLERGARMPSLAA*IPLKAS Trigger: GCTGGCTTTCAAGGGAATGCAGGCAGCCAGGGAAGG...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCAACACTCCTCCCAGCTaGTTCACCTCCCCGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NYEECMCQLRKCSPLRRSNTPPS*FTSPKA Trigger: AGCCTTCGGGGAGGTGAACCAGCTGGGAGGAGTGTT...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGGGATAGGTTTCTTCTCTGTGTTAAAACAGTGTGCGGGCAACACAAATGCCCAAGCGAAGATGCCTaGGTCCCTCTGCTTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EGDRFLLCVKTVCGQHKCPSEDA*VPLLVS Trigger: ACTTACAAGCAGAGGGACCCAGGCATCTTCGCTTGG...GCATTTGTGTTGCCCGCACACTGTTTTAACACAGAGAAGAAACCTATCCCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | ATTAGATATAGAATAATTCTGTGCCTTCAGTCAGATTCTCTGGATAGCAGTCCCGGCTGCGGCGCGGGCTaGTGCTGCTTGTATGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: IRYRIILCLQSDSLDSSPGCGAG*CCLYES Trigger: CGACTCATACAAGCAGCACCAGCCCGCGCCGCAGCC...GGGACTGCTATCCAGAGAATCTGACTGAAGGCACAGAATTATTCTATATCTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | CACAGCAAGCCATTGTTACTACATTCATTAGAGAAGAGTTCTCCATCTCCTTTTGGCTGCGGCGCGGGCTaGTGCTGCTTGTATGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HSKPLLLHSLEKSSPSPFGCGAG*CCLYES Trigger: CGACTCATACAAGCAGCACCAGCCCGCGCCGCAGCC...AAAAGGAGATGGAGAACTCTTCTCTAATGAATGTAGTAACAATGGCTTGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR TCA 90 bp | ATTAGATATAGAATAATTCTGTGCCTTCAGTCAGATTCTCTGGATAGCAGTCCCCCCGTAGCTGGCGGCTaGTGTCACAAGGTCGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: IRYRIILCLQSDSLDSSPPVAGG*CHKVGC Trigger: GCATCCGACCTTGTGACATCAGCCGCCAGCTACGGG...GGGACTGCTATCCAGAGAATCTGACTGAAGGCACAGAATTATTCTATATCTAAT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR TCA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGCTGGTGCTGCTTGTATaGGTCGTAATGACCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPVDLPLSIRDLERGARMLVLLV*VVMTLL Trigger: CAGCAGGGTCATTACGACTCATACAAGCAGCACCAG...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | ATTAGATATAGAATAATTCTGTGCCTTCAGTCAGATTCTCTGGATAGCAGTCCCCGGTCACAGAATGGCTaGCTTCCCTGGCTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IRYRIILCLQSDSLDSSPRSQNG*LPWLPA Trigger: TGCAGGCAGCCAGGGAAGGCAGCCATTCTGTGACCG...GGGACTGCTATCCAGAGAATCTGACTGAAGGCACAGAATTATTCTATATCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCCCAAGCGAAGATGCCTaGGTCCCTCTGCTTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NYEECMCQLRKCSPLRRSPSEDA*VPLLVS Trigger: ACTTACAAGCAGAGGGACCCAGGCATCTTCGCTTGG...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCGGTAAGGAGCCATGCTaGATGCTGAGACGAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: NYEECMCQLRKCSPLRRSGKEPC*MLRRNC Trigger: GCAGTTTCGTCTCAGCATCCAGCATGGCTCCTTACC...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGATGCTGAGACGAAACTaGTCACAGCTGGGAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: FPVDLPLSIRDLERGARMMLRRN*SQLGDH Trigger: ATGGTCTCCCAGCTGTGAGCAGTTTCGTCTCAGCAT...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCATGCTGAGACGAAACTaGTCACAGCTGGGAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: NYEECMCQLRKCSPLRRSMLRRN*SQLGDH Trigger: ATGGTCTCCCAGCTGTGAGCAGTTTCGTCTCAGCAT...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | ACGAGTGTTGGTTGCTTTAGAAAGAAATGCAGCATGAAGCTCTCTATAAGAAATGTGCTGCCGGCATGTTaGCACCCATGTCCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TSVGCFRKKCSMKLSIRNVLPAC*HPCPAT Trigger: TGTGGCTGGACATGGGTGGCAACATGCCGGCAGCAC...ATTTCTTATAGAGAGCTTCATGCTGCATTTCTTTCTAAAGCAACCAACACTCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | ATTAGATATAGAATAATTCTGTGCCTTCAGTCAGATTCTCTGGATAGCAGTCCCGCTGCCTTCCCTGGCTaGCTGCATTCCCTTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IRYRIILCLQSDSLDSSPAAFPG*LHSLES Trigger: GCTTTCAAGGGAATGCAGGCAGCCAGGGAAGGCAGC...GGGACTGCTATCCAGAGAATCTGACTGAAGGCACAGAATTATTCTATATCTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | CACAGCAAGCCATTGTTACTACATTCATTAGAGAAGAGTTCTCCATCTCCTTTTAACACTCCTCCCAGCTaGTTCACCTCCCCGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSKPLLLHSLEKSSPSPFNTPPS*FTSPKA Trigger: AGCCTTCGGGGAGGTGAACCAGCTGGGAGGAGTGTT...AAAAGGAGATGGAGAACTCTTCTCTAATGAATGTAGTAACAATGGCTTGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | ATTAGATATAGAATAATTCTGTGCCTTCAGTCAGATTCTCTGGATAGCAGTCCCTGCGAGACCCGTAGCTaGCGGCTGATGTCACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IRYRIILCLQSDSLDSSPCETRS*RLMSQG Trigger: ACCTTGTGACATCAGCCGCCAGCTACGGGTCTCGCA...GGGACTGCTATCCAGAGAATCTGACTGAAGGCACAGAATTATTCTATATCTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | CACAGCAAGCCATTGTTACTACATTCATTAGAGAAGAGTTCTCCATCTCCTTTTCTGTCGCTCACTCCTTaGTCGGTGATGGAGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: HSKPLLLHSLEKSSPSPFLSLTP*SVMERM Trigger: CATCCGCTCCATCACCGACCAAGGAGTGAGCGACAG...AAAAGGAGATGGAGAACTCTTCTCTAATGAATGTAGTAACAATGGCTTGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CCA 90 bp | ATTAGATATAGAATAATTCTGTGCCTTCAGTCAGATTCTCTGGATAGCAGTCCCGGAATGTCACAGTTGTaGGGGGACAGTGGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRYRIILCLQSDSLDSSPGMSQL*GDSGVL Trigger: CAGCACCCCACTGTCCCCCCACAACTGTGACATTCC...GGGACTGCTATCCAGAGAATCTGACTGAAGGCACAGAATTATTCTATATCTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR CAA 72 bp | AGATCTAGCCGGCCCTACCTCACTGTGTTCTTGTTCTaGGTTGTTAATGTGGCTTCAGTCAGAAGTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RSSRPYLTVFLF*VVNVASVRSGY Trigger: ATAGCCACTTCTGACTGAAGCCACATTAACAACCAAGAACAAGAACACAGTGAGGTAGGGCCGGCTAGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | ACGAGTGTTGGTTGCTTTAGAAAGAAATGCAGCATGAAGCTCTCTATAAGAAATCCGTACTTGGCTTCCTaGTCCAAGGCTCCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSVGCFRKKCSMKLSIRNPYLAS*SKAPFS Trigger: GGAGAAGGGAGCCTTGGAGCAGGAAGCCAAGTACGG...ATTTCTTATAGAGAGCTTCATGCTGCATTTCTTTCTAAAGCAACCAACACTCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR GCA 90 bp | ACGAGTGTTGGTTGCTTTAGAAAGAAATGCAGCATGAAGCTCTCTATAAGAAATCCTGCTGGGCCAAGTTaGCGATCTTGTTGCGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSVGCFRKKCSMKLSIRNPAGPS*RSCCAE Trigger: TTCTGCGCAACAAGATCGGCAACTTGGCCCAGCAGG...ATTTCTTATAGAGAGCTTCATGCTGCATTTCTTTCTAAAGCAACCAACACTCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR CAA 72 bp | CTCCTTTTAAGTTATCAGACAAATGTGGGGCTGAGATaGCTGAACACACAGGTAAGCCAACAACAACAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSYQTNVGLR*LNTQVSQQQQY Trigger: GTACTGTTGTTGTTGGCTTACCTGTGTGTTCAGCAATCTCAGCCCCACATTTGTCTGATAACTTAAAAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR CAA 72 bp | TTACCAAAGACAGACCTACAATGTTCCATAAGCCCTTaGAGGGGGATAGGTTTCTTCTCTGTGTTAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPKTDLQCSISP*RGIGFFSVLKQ Trigger: CTGTTTTAACACAGAGAAGAAACCTATCCCCCTCAAAGGGCTTATGGAACATTGTAGGTCTGTCTTTGGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR CAA 72 bp | TGCTTCAGTACGCACTGTAAACTTCACAGCAAGCCATaGTTACTACATTCATTAGAGAAGAGTTCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CFSTHCKLHSKP*LLHSLEKSSPS Trigger: AGATGGAGAACTCTTCTCTAATGAATGTAGTAACAATGGCTTGCTGTGAAGTTTACAGTGCGTACTGAAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| 3UTR CAA 72 bp | CAACACAAATGCCTCATTCCACCTTTAGAGTTGCTTTaGTTTTTAAATCCTAAAGTTATGCCAGGTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QHKCLIPPLELL*FLNPKVMPGFL Trigger: CAGGAAACCTGGCATAACTTTAGGATTTAAAAACAAAAGCAACTCTAAAGGTGGAATGAGGCATTTGTGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS CCA 90 bp | GGTGCGCGGCAAGGCCACCGATCCGGGGATGGCCGGCACCCCAGGTaGTGTAGGCACCTTAGCTGCTGCCGCCGTGATGGGACTGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: GARQGHRSGDGRHPR*CRHLSCCRRDGTGI Trigger: TATCCCAGTCCCATCACGGCGGCAGCAGCTAAGGTGCCTACACCACCTGGGGTGCCGGCCATCCCCGGATCGGTGGCCTTGCCGCGCACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS GCA 90 bp | TCTCCAATCCATTCACTGCGTGCGGGGCGGCGGCAGGGAAGTTGTTaGGGCCCAGGCTGCTCCACTCCTCCACCTTGGGGCTGTGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPIHSLRAGRRQGSC*GPGCSTPPPWGCGR Trigger: CCTACCACAGCCCCAAGGTGGAGGAGTGGAGCAGCCTGGGCCGCAACAACTTCCCTGCCGCCGCCCCGCACGCAGTGAATGGATTGGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS GCA 90 bp | TTGGCTTCCTGCTCCAAGGCTCCCTTCTCCAATCCATTCACTGCGTaGGGGGCGGCGGCAGGGAAGTTGTTGCGGCCCAGGCTGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LASCSKAPFSNPFTA*GAAAGKLLRPRLLH Trigger: GTGGAGCAGCCTGGGCCGCAACAACTTCCCTGCCGCCGCCCCGCACGCAGTGAATGGATTGGAGAAGGGAGCCTTGGAGCAGGAAGCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS GCA 90 bp | GTACTTGGCTTCCTGCTCCAAGGCTCCCTTCTCCAATCCATTCACTaGGTGCGGGGCGGCGGCAGGGAAGTTGTTGCGGCCCAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLGFLLQGSLLQSIH*VRGGGREVVAAQAA Trigger: AGCAGCCTGGGCCGCAACAACTTCCCTGCCGCCGCCCCGCACGCAGTGAATGGATTGGAGAAGGGAGCCTTGGAGCAGGAAGCCAAGTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS-3UTR CAA 90 bp | TGGACCACTGGAGGGGTGGGGTGTGACGAGAGGGAGGATGTGCTAGGAGGGAAGGCTGCCTGCATTCCCTaGAAAGCCAGCGATGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WTTGGVGCDEREDVLGGKAACIP*KASDAG Trigger: TCCCGCATCGCTGGCTTTCAAGGGAATGCAGGCAGC...CTTCCCTCCTAGCACATCCTCCCTCTCGTCACACCCCACCCCTCCAGTGGTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
||
| CDS CCA 90 bp | GCCTGCATTCCCTTGAAAGCCAGCGATGCGGGAATGTCACAGTTGTaGGGGGACAGTGGGGTGCTGCCGGCATGTTGCCACCCATGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ACIPLKASDAGMSQL*GDSGVLPACCHPCP Trigger: TGGACATGGGTGGCAACATGCCGGCAGCACCCCACTGTCCCCCCACAACTGTGACATTCCCGCATCGCTGGCTTTCAAGGGAATGCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS-3UTR CAA 90 bp | GCTGAAGCCTCTACTGAATACACACGACCTGGGGCAAGTCCAGGTCCAGGAGCCCTCACCGAGGGCACGTaGTACTTGTCGCACACGCCA | + |
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Preference number: 5 (lower is better) Translates to: AEASTEYTRPGASPGPGALTEGT*YLSHTP Trigger: TGGCGTGTGCGACAAGTACAACGTGCCCTCGGTGAG...GGCTCCTGGACCTGGACTTGCCCCAGGTCGTGTGTATTCAGTAGAGGCTTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS-3UTR CAA 90 bp | TCCAGGAGCCCAAGTGGCCCACCACCAAACAGAGAAATACATCACCAGCAAGTCCGAAGCCGAATGGCGTaGGGCAGCGGCCTTCCGTTC | + |
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Preference number: 5 (lower is better) Translates to: SRSPSGPPPNREIHHQQVRSRMA*GSGLPF Trigger: GAACGGAAGGCCGCTGCCCAACGCCATTCGGCTTCG...GACTTGCTGGTGATGTATTTCTCTGTTTGGTGGTGGGCCACTTGGGCTCCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS GCA 90 bp | CAGAGTGCAGAAGCGGTCACAGAATGGCTGCCTTCCCTGGCTGCCTaGATTCCCTTGAAAGCCAGCGATGCGGGAATGTCACAGTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: QSAEAVTEWLPSLAA*IPLKASDAGMSQLW Trigger: CCACAACTGTGACATTCCCGCATCGCTGGCTTTCAAGGGAATGCAGGCAGCCAGGGAAGGCAGCCATTCTGTGACCGCTTCTGCACTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS-3UTR CAA 90 bp | GAGGGGGATAGGTTTCTTCTCTGTGTTAAAACAGTGTGCGGGCAACACAAATGCGAGGGCACGTTGTACTaGTCGCACACGCCATCCGCC | + |
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Preference number: 5 (lower is better) Translates to: EGDRFLLCVKTVCGQHKCEGTLY*SHTPSA Trigger: GGCGGATGGCGTGTGCGACAAGTACAACGTGCCCTC...GCATTTGTGTTGCCCGCACACTGTTTTAACACAGAGAAGAAACCTATCCCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS-3UTR CAA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGGGTGCTGCCGGCATGTaGCCACCCATGTCCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: FPVDLPLSIRDLERGARMGAAGM*PPMSSH Trigger: GTGGCTGGACATGGGTGGCAACATGCCGGCAGCACC...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS-3UTR CAA 90 bp | AATTATGAAGAGTGCATGTGCCAACTTAGAAAATGTTCCCCTCTGAGGAGGAGCGGTGCTGCCGGCATGTaGCCACCCATGTCCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: NYEECMCQLRKCSPLRRSGAAGM*PPMSSH Trigger: GTGGCTGGACATGGGTGGCAACATGCCGGCAGCACC...GCTCCTCCTCAGAGGGGAACATTTTCTAAGTTGGCACATGCACTCTTCATAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS-3UTR CAA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGGAGGGCACGTTGTACTaGTCGCACACGCCATCCGCC | + |
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Preference number: 5 (lower is better) Translates to: FPVDLPLSIRDLERGARMEGTLY*SHTPSA Trigger: GGCGGATGGCGTGTGCGACAAGTACAACGTGCCCTC...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS-3UTR CAA 90 bp | ATTAGATATAGAATAATTCTGTGCCTTCAGTCAGATTCTCTGGATAGCAGTCCCGCGGCGGCAGGGAAGTaGTTGCGGCCCAGGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: IRYRIILCLQSDSLDSSPAAAGK*LRPRLL Trigger: GAGCAGCCTGGGCCGCAACAACTTCCCTGCCGCCGC...GGGACTGCTATCCAGAGAATCTGACTGAAGGCACAGAATTATTCTATATCTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS-3UTR CAA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGGGTGCCTGGCCGTACTaGGCTTCCTGCTCCAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: FPVDLPLSIRDLERGARMGAWPY*ASCSKA Trigger: AGCCTTGGAGCAGGAAGCCAAGTACGGCCAGGCACC...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS-3UTR CAA 90 bp | ACGAGTGTTGGTTGCTTTAGAAAGAAATGCAGCATGAAGCTCTCTATAAGAAATGCGGCGGCAGGGAAGTaGTTGCGGCCCAGGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: TSVGCFRKKCSMKLSIRNAAAGK*LRPRLL Trigger: GAGCAGCCTGGGCCGCAACAACTTCCCTGCCGCCGC...ATTTCTTATAGAGAGCTTCATGCTGCATTTCTTTCTAAAGCAACCAACACTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS-3UTR CAA 90 bp | TTCCCTGTGGATTTACCATTATCAATTAGAGACCTGGAGAGAGGAGCGAGAATGGCCAAGTTGCCGATCTaGTTGCGCAGAATACGGCTG | + |
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Preference number: 5 (lower is better) Translates to: FPVDLPLSIRDLERGARMAKLPI*LRRIRL Trigger: CAGCCGTATTCTGCGCAACAAGATCGGCAACTTGGC...CATTCTCGCTCCTCTCTCCAGGTCTCTAATTGATAATGGTAAATCCACAGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS-3UTR CAA 90 bp | CACAGCAAGCCATTGTTACTACATTCATTAGAGAAGAGTTCTCCATCTCCTTTTCTCACCGAGGGCACGTaGTACTTGTCGCACACGCCA | + |
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Preference number: 5 (lower is better) Translates to: HSKPLLLHSLEKSSPSPFLTEGT*YLSHTP Trigger: TGGCGTGTGCGACAAGTACAACGTGCCCTCGGTGAG...AAAAGGAGATGGAGAACTCTTCTCTAATGAATGTAGTAACAATGGCTTGCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS-3UTR CAA 90 bp | ATTAGATATAGAATAATTCTGTGCCTTCAGTCAGATTCTCTGGATAGCAGTCCCGCTGTCGCTCACTCCTaGGTCGGTGATGGAGCGGAT | + |
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Preference number: 5 (lower is better) Translates to: IRYRIILCLQSDSLDSSPAVAHS*VGDGAD Trigger: ATCCGCTCCATCACCGACCAAGGAGTGAGCGACAGC...GGGACTGCTATCCAGAGAATCTGACTGAAGGCACAGAATTATTCTATATCTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS-3UTR CAA 90 bp | ACGAGTGTTGGTTGCTTTAGAAAGAAATGCAGCATGAAGCTCTCTATAAGAAATGCTGTCGCTCACTCCTaGGTCGGTGATGGAGCGGAT | + |
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Preference number: 5 (lower is better) Translates to: TSVGCFRKKCSMKLSIRNAVAHS*VGDGAD Trigger: ATCCGCTCCATCACCGACCAAGGAGTGAGCGACAGC...ATTTCTTATAGAGAGCTTCATGCTGCATTTCTTTCTAAAGCAACCAACACTCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS-3UTR CAA 90 bp | ACGAGTGTTGGTTGCTTTAGAAAGAAATGCAGCATGAAGCTCTCTATAAGAAATGCTGCCTGCATTCCCTaGAAAGCCAGCGATGCGGGA | + |
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Preference number: 5 (lower is better) Translates to: TSVGCFRKKCSMKLSIRNAACIP*KASDAG Trigger: TCCCGCATCGCTGGCTTTCAAGGGAATGCAGGCAGC...ATTTCTTATAGAGAGCTTCATGCTGCATTTCTTTCTAAAGCAACCAACACTCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS-3UTR CAA 90 bp | ACGAGTGTTGGTTGCTTTAGAAAGAAATGCAGCATGAAGCTCTCTATAAGAAATGCCAAGTTGCCGATCTaGTTGCGCAGAATACGGCTG | + |
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Preference number: 5 (lower is better) Translates to: TSVGCFRKKCSMKLSIRNAKLPI*LRRIRL Trigger: CAGCCGTATTCTGCGCAACAAGATCGGCAACTTGGC...ATTTCTTATAGAGAGCTTCATGCTGCATTTCTTTCTAAAGCAACCAACACTCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS GCA 72 bp | GCGGGGCGGCGGCAGGGAAGTTGTTGCGGCCCAGGCTaGTCCACTCCTCCACCTTGGGGCTGTGGTAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: AGRRQGSCCGPG*STPPPWGCGRG Trigger: CCCCCTACCACAGCCCCAAGGTGGAGGAGTGGAGCAGCCTGGGCCGCAACAACTTCCCTGCCGCCGCCCCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS CCA 72 bp | CAAGGCCACCGATCCGGGGATGGCCGGCACCCCAGGTaGTGTAGGCACCTTAGCTGCTGCCGCCGTGATGGG | + |
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Preference number: 6 (lower is better) Translates to: QGHRSGDGRHPR*CRHLSCCRRDG Trigger: CCCATCACGGCGGCAGCAGCTAAGGTGCCTACACCACCTGGGGTGCCGGCCATCCCCGGATCGGTGGCCTTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS CAA 72 bp | CCATTCACTGCGTGCGGGGCGGCGGCAGGGAAGTTGTaGCGGCCCAGGCTGCTCCACTCCTCCACCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: PFTACGAAAGKL*RPRLLHSSTLG Trigger: CCCCAAGGTGGAGGAGTGGAGCAGCCTGGGCCGCAACAACTTCCCTGCCGCCGCCCCGCACGCAGTGAATGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS CAA 90 bp | CCCTTCTCCAATCCATTCACTGCGTGCGGGGCGGCGGCAGGGAAGTaGTTGCGGCCCAGGCTGCTCCACTCCTCCACCTTGGGGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: PFSNPFTACGAAAGK*LRPRLLHSSTLGLW Trigger: CCACAGCCCCAAGGTGGAGGAGTGGAGCAGCCTGGGCCGCAACAACTTCCCTGCCGCCGCCCCGCACGCAGTGAATGGATTGGAGAAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS TCA 72 bp | CAGCGCGGGCTGCGGCGCGGGCTGGTGCTGCTTGTATaGGTCGTAATGACCCTGCTGGGCCAAGTTGCCGAT | + |
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Preference number: 6 (lower is better) Translates to: QRGLRRGLVLLV*VVMTLLGQVAD Trigger: ATCGGCAACTTGGCCCAGCAGGGTCATTACGACTCATACAAGCAGCACCAGCCCGCGCCGCAGCCCGCGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS GCA 72 bp | TGCTCCAAGGCTCCCTTCTCCAATCCATTCACTGCGTaGGGGGCGGCGGCAGGGAAGTTGTTGCGGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: CSKAPFSNPFTA*GAAAGKLLRPR Trigger: CCTGGGCCGCAACAACTTCCCTGCCGCCGCCCCGCACGCAGTGAATGGATTGGAGAAGGGAGCCTTGGAGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS CAA 72 bp | AATCCATTCACTGCGTGCGGGGCGGCGGCAGGGAAGTaGTTGCGGCCCAGGCTGCTCCACTCCTCCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: NPFTACGAAAGK*LRPRLLHSSTL Trigger: CAAGGTGGAGGAGTGGAGCAGCCTGGGCCGCAACAACTTCCCTGCCGCCGCCCCGCACGCAGTGAATGGATT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS CCA 72 bp | CCCTTGAAAGCCAGCGATGCGGGAATGTCACAGTTGTaGGGGGACAGTGGGGTGCTGCCGGCATGTTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: PLKASDAGMSQL*GDSGVLPACCH Trigger: GTGGCAACATGCCGGCAGCACCCCACTGTCCCCCCACAACTGTGACATTCCCGCATCGCTGGCTTTCAAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS GCA 72 bp | GGGAGACCATTCGGTGCCTGGCCGTACTTGGCTTCCTaGTCCAAGGCTCCCTTCTCCAATCCATTCACTGCG | + |
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Preference number: 6 (lower is better) Translates to: GRPFGAWPYLAS*SKAPFSNPFTA Trigger: CGCAGTGAATGGATTGGAGAAGGGAGCCTTGGAGCAGGAAGCCAAGTACGGCCAGGCACCGAATGGTCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS GCA 72 bp | GAAGCGGTCACAGAATGGCTGCCTTCCCTGGCTGCCTaGATTCCCTTGAAAGCCAGCGATGCGGGAATGTCA | + |
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Preference number: 6 (lower is better) Translates to: EAVTEWLPSLAA*IPLKASDAGMS Trigger: TGACATTCCCGCATCGCTGGCTTTCAAGGGAATGCAGGCAGCCAGGGAAGGCAGCCATTCTGTGACCGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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| CDS TCA 72 bp | TTGGGCTGGTGTAGGGTAAGGAGCCATGCTGGATGCTaGGACGAAACTGCTCACAGCTGGGAGACCATTCGG | + |
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Preference number: 6 (lower is better) Translates to: LGWCRVRSHAGC*DETAHSWETIR Trigger: CCGAATGGTCTCCCAGCTGTGAGCAGTTTCGTCTCAGCATCCAGCATGGCTCCTTACCCTACACCAGCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001538.10 ENSMUST00000153250.9 |
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