Pregenerated sensors for PAX8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026976Ensembl transcript IDs: ENSMUST00000028355.11, ENSMUST00000136228.10, ENSMUST00000149294.8, ENSMUST00000153535.2, ENSMUST00000153601.8
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGCCAGAGAGGGAATCTTGTTGCTGGCCTTGGGGGTCTCTTCAGTaGCTGCGCGGGCTGGAACTGCAGAAAGCACACTTGAATTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: EPERESCCWPWGSLQ*LRGLELQKAHLNWQ Trigger: TTGCCAATTCAAGTGTGCTTTCTGCAGTTCCAGCCCGCGCAGCCACTGAAGAGACCCCCAAGGCCAGCAACAAGATTCCCTCTCTGGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR TCA 90 bp | GGTGGCCCTGTACACCCTCAGACTCATCTCCCTCTAAGTTCTTCGTaGACCCCTTTTCTCTCCTTTGGTGGGTGCCAGCTTCGGTACATT | + |
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Preference number: 1 (lower is better) Translates to: GGPVHPQTHLPLSSS*TPFLSFGGCQLRYI Trigger: AATGTACCGAAGCTGGCACCCACCAAAGGAGAGAAAAGGGGTTCACGAAGAACTTAGAGGGAGATGAGTCTGAGGGTGTACAGGGCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR CCA 90 bp | GCTGTGATTGTAGGCCAGAAGGACTTGCATACTGTTCATAATTGCTaGAGTTGTCTAGATGAAGACCAAACAGGTGGCCCTGTACACCCT | + |
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Preference number: 1 (lower is better) Translates to: AVIVGQKDLHTVHNC*SCLDEDQTGGPVHP Trigger: AGGGTGTACAGGGCCACCTGTTTGGTCTTCATCTAGACAACTCCAGCAATTATGAACAGTATGCAAGTCCTTCTGGCCTACAATCACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR TCA 90 bp | TTTGGTGGGTGCCAGCTTCGGTACATTTCTCCTCTGTGTCTCTTTTaGAATGGGTGGTTCTTGTTTCCTGGAACTCCTGTCACTCACAAA | + |
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Preference number: 1 (lower is better) Translates to: FGGCQLRYISPLCLF*NGWFLFPGTPVTHK Trigger: TTTGTGAGTGACAGGAGTTCCAGGAAACAAGAACCACCCATTTCAAAAGAGACACAGAGGAGAAATGTACCGAAGCTGGCACCCACCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR CCA 90 bp | TGGGTGCCAGCTTCGGTACATTTCTCCTCTGTGTCTCTTTTGAAATaGGTGGTTCTTGTTTCCTGGAACTCCTGTCACTCACAAAATGAA | + |
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Preference number: 1 (lower is better) Translates to: WVPASVHFSSVSLLK*VVLVSWNSCHSQNE Trigger: TTCATTTTGTGAGTGACAGGAGTTCCAGGAAACAAGAACCACCCATTTCAAAAGAGACACAGAGGAGAAATGTACCGAAGCTGGCACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR CCA 90 bp | CATTTCTCCTCTGTGTCTCTTTTGAAATGGGTGGTTCTTGTTTCCTaGAACTCCTGTCACTCACAAAATGAATCCTGGAGGACAGTTTGG | + |
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Preference number: 1 (lower is better) Translates to: HFSSVSLLKWVVLVS*NSCHSQNESWRTVW Trigger: CCAAACTGTCCTCCAGGATTCATTTTGTGAGTGACAGGAGTTCCAGGAAACAAGAACCACCCATTTCAAAAGAGACACAGAGGAGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR TCA 90 bp | AGATATTTCAGAGACCAAAGACTGGGGGATGGAAAGAGGAAAGCTTaGCCGAAACAGAGTTTCATTTACGGTATTTACAGTGAGGTTGTA | + |
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Preference number: 1 (lower is better) Translates to: RYFRDQRLGDGKRKA*PKQSFIYGIYSEVV Trigger: TACAACCTCACTGTAAATACCGTAAATGAAACTCTGTTTCGGTCAAGCTTTCCTCTTTCCATCCCCCAGTCTTTGGTCTCTGAAATATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCCTTGGGGGTCTCTTCAGTGGCTGCGCGGGCTGGAACTGCAGAAAGCACCTCTCCTTTGGTGGGTaGCAGCTTCGGTACATTTCT | + |
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Preference number: 2 (lower is better) Translates to: AGLGGLFSGCAGWNCRKHLSFGG*QLRYIS Trigger: AGAAATGTACCGAAGCTGGCACCCACCAAAGGAGAG...GTGCTTTCTGCAGTTCCAGCCCGCGCAGCCACTGAAGAGACCCCCAAGGCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGAGCCAGAGAGGGAATCTTGTTGCTGGCCTTGGGGGTCTCTTCAGTGGCTCCTGGAGGACAGTTTaGCCTTCTCCAAGGTCATCC | + |
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Preference number: 2 (lower is better) Translates to: LRSQRGNLVAGLGGLFSGSWRTV*PSPRSS Trigger: GGATGACCTTGGAGAAGGCCAAACTGTCCTCCAGGA...GCCACTGAAGAGACCCCCAAGGCCAGCAACAAGATTCCCTCTCTGGCTCCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR CAA 90 bp | TCTTCAGTGGCTGCGCGGGCTGGAACTGCAGAAAGCACACTTGAATaGGCAAGGCTGTTGAGGAGAGGACATGGCTGGTCCCATCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: SSVAARAGTAESTLE*ARLLRRGHGWSHLL Trigger: CAACAGATGGGACCAGCCATGTCCTCTCCTCAACAGCCTTGCCAATTCAAGTGTGCTTTCTGCAGTTCCAGCCCGCGCAGCCACTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR TCA 90 bp | AACAGGTGGCCCTGTACACCCTCAGACTCATCTCCCTCTAAGTTCTTCGTGAACCAGGCCAAGTCCTCCTaGTTCTTGCCTGGTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: NRWPCTPSDSSPSKFFVNQAKSS*FLPGSS Trigger: GGAAGAACCAGGCAAGAATCAGGAGGACTTGGCCTG...GTTCACGAAGAACTTAGAGGGAGATGAGTCTGAGGGTGTACAGGGCCACCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR TCA 90 bp | AGACCAAAGACTGGGGGATGGAAAGAGGAAAGCTTGACCGAAACAGAGTTTCATGGGGTAGCCACTGGTTaGGAGGCTAAGGGGTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: RPKTGGWKEESLTETEFHGVATG*EAKGCL Trigger: CAAGCACCCCTTAGCCTCTCAACCAGTGGCTACCCC...ATGAAACTCTGTTTCGGTCAAGCTTTCCTCTTTCCATCCCCCAGTCTTTGGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR CCA 90 bp | AACAGGTGGCCCTGTACACCCTCAGACTCATCTCCCTCTAAGTTCTTCGTGAACCTCCTGATTCTTGCCTaGTTCTTCCCACTGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: NRWPCTPSDSSPSKFFVNLLILA*FFPLSP Trigger: TGGGGACAGTGGGAAGAACCAGGCAAGAATCAGGAG...GTTCACGAAGAACTTAGAGGGAGATGAGTCTGAGGGTGTACAGGGCCACCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR CCA 90 bp | AGACCAAAGACTGGGGGATGGAAAGAGGAAAGCTTGACCGAAACAGAGTTTCATCTTTGTGTGACTCTCTaGGGCCTGTCTCAGGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: RPKTGGWKEESLTETEFHLCVTL*GLSQAK Trigger: CTTGGCCTGAGACAGGCCCCAGAGAGTCACACAAAG...ATGAAACTCTGTTTCGGTCAAGCTTTCCTCTTTCCATCCCCCAGTCTTTGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR TCA 90 bp | AACAGGTGGCCCTGTACACCCTCAGACTCATCTCCCTCTAAGTTCTTCGTGAACCTGTCACTCACAAAATaGATCCTGGAGGACAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: NRWPCTPSDSSPSKFFVNLSLTK*ILEDSL Trigger: CAAACTGTCCTCCAGGATTCATTTTGTGAGTGACAG...GTTCACGAAGAACTTAGAGGGAGATGAGTCTGAGGGTGTACAGGGCCACCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR CCA 90 bp | TCATTTACGGTATTTACAGTGAGGTTGTATGTGGGGAAAGAGCTGAGGAGCCAGGTTGAGGAGAGGACATaGCTGGTCCCATCTGTTGTG | + |
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Preference number: 2 (lower is better) Translates to: SFTVFTVRLYVGKELRSQVEERT*LVPSVV Trigger: CACAACAGATGGGACCAGCCATGTCCTCTCCTCAAC...CTGGCTCCTCAGCTCTTTCCCCACATACAACCTCACTGTAAATACCGTAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR CAA 90 bp | CTTTGGTGGGTGCCAGCTTCGGTACATTTCTCCTCTGTGTCTCTTTaGAAATGGGTGGTTCTTGTTTCCTGGAACTCCTGTCACTCACAA | + |
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Preference number: 2 (lower is better) Translates to: LWWVPASVHFSSVSL*KWVVLVSWNSCHSQ Trigger: TTGTGAGTGACAGGAGTTCCAGGAAACAAGAACCACCCATTTCAAAAGAGACACAGAGGAGAAATGTACCGAAGCTGGCACCCACCAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR TCA 90 bp | AACAGGTGGCCCTGTACACCCTCAGACTCATCTCCCTCTAAGTTCTTCGTGAACCCTCTGTGTCTCTTTTaGAATGGGTGGTTCTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: NRWPCTPSDSSPSKFFVNPLCLF*NGWFLF Trigger: AAACAAGAACCACCCATTTCAAAAGAGACACAGAGG...GTTCACGAAGAACTTAGAGGGAGATGAGTCTGAGGGTGTACAGGGCCACCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR GCA 90 bp | AGACCAAAGACTGGGGGATGGAAAGAGGAAAGCTTGACCGAAACAGAGTTTCATAGTCCTCCTGATTCTTaGCTGGTTCTTCCCACTGTC | + |
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Preference number: 2 (lower is better) Translates to: RPKTGGWKEESLTETEFHSPPDS*LVLPTV Trigger: GACAGTGGGAAGAACCAGGCAAGAATCAGGAGGACT...ATGAAACTCTGTTTCGGTCAAGCTTTCCTCTTTCCATCCCCCAGTCTTTGGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR CCA 90 bp | TGTCTAGATGAAGACCAAACAGGTGGCCCTGTACACCCTCAGACTCATCTCCCTAGTGAGCGGCAATGCTaGAATTGTGGTTATTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: CLDEDQTGGPVHPQTHLPSERQC*NCGYFS Trigger: TGAAAAATAACCACAATTCCAGCATTGCCGCTCACT...AGGGAGATGAGTCTGAGGGTGTACAGGGCCACCTGTTTGGTCTTCATCTAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR GCA 90 bp | TCATTTACGGTATTTACAGTGAGGTTGTATGTGGGGAAAGAGCTGAGGAGCCAGGGGAGTGAGCGGCAATaGTGGAATTGTGGTTATTTT | + |
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Preference number: 2 (lower is better) Translates to: SFTVFTVRLYVGKELRSQGSERQ*WNCGYF Trigger: AAAATAACCACAATTCCAGCATTGCCGCTCACTCCC...CTGGCTCCTCAGCTCTTTCCCCACATACAACCTCACTGTAAATACCGTAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR CAA 90 bp | AAGCTTGACCGAAACAGAGTTTCATTTACGGTATTTACAGTGAGGTaGTATGTGGGGAAAGAGCTGAGGAGCCAGAGAGGGAATCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: KLDRNRVSFTVFTVR*YVGKELRSQRGNLV Trigger: AACAAGATTCCCTCTCTGGCTCCTCAGCTCTTTCCCCACATACAACCTCACTGTAAATACCGTAAATGAAACTCTGTTTCGGTCAAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR GCA 90 bp | GATATTTCAGAGACCAAAGACTGGGGGATGGAAAGAGGAAAGCTTGACCGAAACAGGGGTGCTTGTAAATaGACAGCAACTGGAAATAGA | + |
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Preference number: 2 (lower is better) Translates to: DISETKDWGMERGKLDRNRGACK*TATGNR Trigger: TCTATTTCCAGTTGCTGTGCATTTACAAGCACCCCT...GTTTCGGTCAAGCTTTCCTCTTTCCATCCCCCAGTCTTTGGTCTCTGAAATATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR CCA 90 bp | AGACCAAAGACTGGGGGATGGAAAGAGGAAAGCTTGACCGAAACAGAGTTTCATGTGTCTCTTTTGAAATaGGTGGTTCTTGTTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RPKTGGWKEESLTETEFHVSLLK*VVLVSW Trigger: CCAGGAAACAAGAACCACCCATTTCAAAAGAGACAC...ATGAAACTCTGTTTCGGTCAAGCTTTCCTCTTTCCATCCCCCAGTCTTTGGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR CCA 72 bp | GCTGAGGAGCCAGAGAGGGAATCTTGTTGCTGGCCTTaGGGGTCTCTTCAGTGGCTGCGCGGGCTGGAACTG | + |
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Preference number: 3 (lower is better) Translates to: AEEPERESCCWP*GSLQWLRGLEL Trigger: CAGTTCCAGCCCGCGCAGCCACTGAAGAGACCCCCAAGGCCAGCAACAAGATTCCCTCTCTGGCTCCTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR CCA 72 bp | GAAAGAGCTGAGGAGCCAGAGAGGGAATCTTGTTGCTaGCCTTGGGGGTCTCTTCAGTGGCTGCGCGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: ERAEEPERESCC*PWGSLQWLRGL Trigger: CAGCCCGCGCAGCCACTGAAGAGACCCCCAAGGCCAGCAACAAGATTCCCTCTCTGGCTCCTCAGCTCTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR CAA 90 bp | GCTGGCCTTGGGGGTCTCTTCAGTGGCTGCGCGGGCTGGAACTGCAGAAAGCACGGCTGGTCCCATCTGTaGTGTCTTCCTATGTTCTAC | + |
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Preference number: 3 (lower is better) Translates to: AGLGGLFSGCAGWNCRKHGWSHL*CLPMFY Trigger: GTAGAACATAGGAAGACACAACAGATGGGACCAGCC...GTGCTTTCTGCAGTTCCAGCCCGCGCAGCCACTGAAGAGACCCCCAAGGCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR CCA 72 bp | AGGGAATCTTGTTGCTGGCCTTGGGGGTCTCTTCAGTaGCTGCGCGGGCTGGAACTGCAGAAAGCACACTTG | + |
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Preference number: 3 (lower is better) Translates to: RESCCWPWGSLQ*LRGLELQKAHL Trigger: CAAGTGTGCTTTCTGCAGTTCCAGCCCGCGCAGCCACTGAAGAGACCCCCAAGGCCAGCAACAAGATTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR TCA 72 bp | AGTGGCTGCGCGGGCTGGAACTGCAGAAAGCACACTTaGATTGGCAAGGCTGTTGAGGAGAGGACATGGCTG | + |
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Preference number: 3 (lower is better) Translates to: SGCAGWNCRKHT*IGKAVEERTWL Trigger: CAGCCATGTCCTCTCCTCAACAGCCTTGCCAATTCAAGTGTGCTTTCTGCAGTTCCAGCCCGCGCAGCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR CAA 90 bp | AACAGGTGGCCCTGTACACCCTCAGACTCATCTCCCTCTAAGTTCTTCGTGAACATCCTGGAGGACAGTTaGGCCTTCTCCAAGGTCATC | + |
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Preference number: 3 (lower is better) Translates to: NRWPCTPSDSSPSKFFVNILEDS*AFSKVI Trigger: GATGACCTTGGAGAAGGCCAAACTGTCCTCCAGGAT...GTTCACGAAGAACTTAGAGGGAGATGAGTCTGAGGGTGTACAGGGCCACCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR CAA 90 bp | CTGAGGAGCCAGAGAGGGAATCTTGTTGCTGGCCTTGGGGGTCTCTTCAGTGGCTCCTCTGTGTCTCTTTaGAAATGGGTGGTTCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: LRSQRGNLVAGLGGLFSGSSVSL*KWVVLV Trigger: AACAAGAACCACCCATTTCAAAAGAGACACAGAGGA...GCCACTGAAGAGACCCCCAAGGCCAGCAACAAGATTCCCTCTCTGGCTCCTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR CAA 90 bp | GATATTTCAGAGACCAAAGACTGGGGGATGGAAAGAGGAAAGCTTGACCGAAACCCCCTTTTCTCTCCTTaGGTGGGTGCCAGCTTCGGT | + |
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Preference number: 3 (lower is better) Translates to: DISETKDWGMERGKLDRNPLFSP*VGASFG Trigger: ACCGAAGCTGGCACCCACCAAAGGAGAGAAAAGGGG...GTTTCGGTCAAGCTTTCCTCTTTCCATCCCCCAGTCTTTGGTCTCTGAAATATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR TCA 72 bp | GAACTGCAGAAAGCACACTTGAATTGGCAAGGCTGTTaGGGAGAGGACATGGCTGGTCCCATCTGTTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: ELQKAHLNWQGC*GEDMAGPICCV Trigger: GACACAACAGATGGGACCAGCCATGTCCTCTCCTCAACAGCCTTGCCAATTCAAGTGTGCTTTCTGCAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR TCA 72 bp | TGCCAGCTTCGGTACATTTCTCCTCTGTGTCTCTTTTaGAATGGGTGGTTCTTGTTTCCTGGAACTCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: CQLRYISPLCLF*NGWFLFPGTPV Trigger: GACAGGAGTTCCAGGAAACAAGAACCACCCATTTCAAAAGAGACACAGAGGAGAAATGTACCGAAGCTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR-3UTR CAA 90 bp | GATATTTCAGAGACCAAAGACTGGGGGATGGAAAGAGGAAAGCTTGACCGAAACGTATTTACAGTGAGGTaGTATGTGGGGAAAGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: DISETKDWGMERGKLDRNVFTVR*YVGKEL Trigger: CAGCTCTTTCCCCACATACAACCTCACTGTAAATAC...GTTTCGGTCAAGCTTTCCTCTTTCCATCCCCCAGTCTTTGGTCTCTGAAATATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| 3UTR CCA 72 bp | TCTGTGTCTCTTTTGAAATGGGTGGTTCTTGTTTCCTaGAACTCCTGTCACTCACAAAATGAATCCTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SVSLLKWVVLVS*NSCHSQNESWR Trigger: CCTCCAGGATTCATTTTGTGAGTGACAGGAGTTCCAGGAAACAAGAACCACCCATTTCAAAAGAGACACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| CDS-3UTR CCA 90 bp | GCTGGCCTTGGGGGTCTCTTCAGTGGCTGCGCGGGCTGGAACTGCAGAAAGCACCCCCTTTGGTGTGGCTaGGGGAGGCATAGGCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: AGLGGLFSGCAGWNCRKHPLWCG*GRHRPP Trigger: CGGAGGCCTATGCCTCCCCCAGCCACACCAAAGGGG...GTGCTTTCTGCAGTTCCAGCCCGCGCAGCCACTGAAGAGACCCCCAAGGCCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| CDS-3UTR CCA 90 bp | GCTGGCCTTGGGGGTCTCTTCAGTGGCTGCGCGGGCTGGAACTGCAGAAAGCACGGTATCCAGGCAGCGTaGGCCCCACCATCTCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: AGLGGLFSGCAGWNCRKHGIQAA*APPSLA Trigger: GGCGAGAGATGGTGGGGCCCACGCTGCCTGGATACC...GTGCTTTCTGCAGTTCCAGCCCGCGCAGCCACTGAAGAGACCCCCAAGGCCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| CDS-3UTR CCA 90 bp | GCTGGCCTTGGGGGTCTCTTCAGTGGCTGCGCGGGCTGGAACTGCAGAAAGCACTCAGCAGGCTGGAGTTaGGGAAGCGCCAGGCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: AGLGGLFSGCAGWNCRKHSAGWS*GSARPH Trigger: GTGAGGCCTGGCGCTTCCCCAACTCCAGCCTGCTGA...GTGCTTTCTGCAGTTCCAGCCCGCGCAGCCACTGAAGAGACCCCCAAGGCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| CDS-3UTR CCA 90 bp | GCTGGCCTTGGGGGTCTCTTCAGTGGCTGCGCGGGCTGGAACTGCAGAAAGCACTGCCCTGTCCACTGGTaGGGATGTGGGGTGGGTATC | + |
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Preference number: 4 (lower is better) Translates to: AGLGGLFSGCAGWNCRKHCPVHW*GCGVGI Trigger: GATACCCACCCCACATCCCCACCAGTGGACAGGGCA...GTGCTTTCTGCAGTTCCAGCCCGCGCAGCCACTGAAGAGACCCCCAAGGCCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| CDS-3UTR CCA 90 bp | CCCCATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTCCCCTTTGGTGTGGCTaGGGGAGGCATAGGCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: PHDNYRWSKAVAEVGGALPLWCG*GRHRPP Trigger: CGGAGGCCTATGCCTCCCCCAGCCACACCAAAGGGG...AAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
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| CDS-3UTR CCA 90 bp | ACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCTTGGGTATCCAGGCAGCGTaGGCCCCACCATCTCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: TTTDGQRLWQRWVVRLALGIQAA*APPSLA Trigger: GGCGAGAGATGGTGGGGCCCACGCTGCCTGGATACC...CAAGGCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGAGCCAGAGAGGGAATCTTGTTGCTGGCCTTGGGGGTCTCTTCAGTGGCCCACTGGTGGGGATGTaGGGTGGGTATCCAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LRSQRGNLVAGLGGLFSGPLVGM*GGYPGS Trigger: GCTGCCTGGATACCCACCCCACATCCCCACCAGTGG...GCCACTGAAGAGACCCCCAAGGCCAGCAACAAGATTCCCTCTCTGGCTCCTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| CDS-3UTR TCA 90 bp | CTGAGGAGCCAGAGAGGGAATCTTGTTGCTGGCCTTGGGGGTCTCTTCAGTGGCAAGGCCCCTCCTAGTTaGTTCAGCCCTCCATGGCCG | + |
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Preference number: 4 (lower is better) Translates to: LRSQRGNLVAGLGGLFSGKAPPS*FSPPWP Trigger: CGGCCATGGAGGGCTGAATCAACTAGGAGGGGCCTT...GCCACTGAAGAGACCCCCAAGGCCAGCAACAAGATTCCCTCTCTGGCTCCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| CDS-3UTR CCA 90 bp | CTGAGGAGCCAGAGAGGGAATCTTGTTGCTGGCCTTGGGGGTCTCTTCAGTGGCTGGCCACCTTGGGCTTaGAGCCCCCTATCACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LRSQRGNLVAGLGGLFSGWPPWA*SPLSLQ Trigger: CTGGAGTGATAGGGGGCTCCAAGCCCAAGGTGGCCA...GCCACTGAAGAGACCCCCAAGGCCAGCAACAAGATTCCCTCTCTGGCTCCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| CDS-3UTR CCA 90 bp | CATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCCACTGGTGGGGATGTaGGGTGGGTATCCAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HDNYRWSKAVAEVGGALGPLVGM*GGYPGS Trigger: GCTGCCTGGATACCCACCCCACATCCCCACCAGTGG...GCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
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| CDS-3UTR CCA 90 bp | TGTCCCCATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGTCAGCAGGCTGGAGTTaGGGAAGCGCCAGGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CPHDNYRWSKAVAEVGGASAGWS*GSARPH Trigger: GTGAGGCCTGGCGCTTCCCCAACTCCAGCCTGCTGA...CGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATGGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCCCATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGGGAATCCGACTGGGGTaGCTCTGGGGGTGTTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: CPHDNYRWSKAVAEVGGAGIRLG*LWGCYS Trigger: GCTGTAACACCCCCAGAGTCACCCCAGTCGGATTCC...CGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATGGGGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR CCA 90 bp | CCCCATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTTGGCCACCTTGGGCTTaGAGCCCCCTATCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PHDNYRWSKAVAEVGGALWPPWA*SPLSLQ Trigger: CTGGAGTGATAGGGGGCTCCAAGCCCAAGGTGGCCA...AAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR CCA 90 bp | CATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCTCTTCTCCACCACCTTaGGGGTGGCCACCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HDNYRWSKAVAEVGGALGSSPPP*GWPPWA Trigger: AGCCCAAGGTGGCCACCCCCAAGGTGGTGGAGAAGA...GCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR TCA 90 bp | TACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCTTGATGTAAAGGCCCCTCCTAGTTaGTTCAGCCCTCCATGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YRWSKAVAEVGGALGLDVKAPPS*FSPPWP Trigger: CGGCCATGGAGGGCTGAATCAACTAGGAGGGGCCTT...TACATCAAGGCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR TCA 90 bp | ATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCTGGGGGTGTTACAGCTaGGCTGGGGATCAGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MTTTDGQRLWQRWVVRLAWGCYS*AGDQCV Trigger: CACACACTGATCCCCAGCTCAGCTGTAACACCCCCA...GGCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR TCA 90 bp | GACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCTTCGAGATGGTGCTGGCTaGAGGTGTCCGTACGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DNYRWSKAVAEVGGALGLRDGAG*RCPYEG Trigger: ACCTTCGTACGGACACCTTCAGCCAGCACCATCTCG...AAGGCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTCTGGCAGAGGCCTaGCATTCACAAAGGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPHDNYRWSKAVAEVGGALLAEA*HSQRPL Trigger: GAGGGGCCTTTGTGAATGGCAGGCCTCTGCCAGAAG...CGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATGGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGTCACTCCAGGCCGGATaGTGCCAGTCTCGTAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: CPHDNYRWSKAVAEVGGASLQAG*CQSRST Trigger: GGTACTACGAGACTGGCAGCATCCGGCCTGGAGTGA...CGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATGGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGAGCCAGAGAGGGAATCTTGTTGCTGGCCTTGGGGGTCTCTTCAGTGGCTTCGAGGACCACTGCTaGTGCTCTGTGAGTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LRSQRGNLVAGLGGLFSGFEDHC*CSVSRC Trigger: GCATCGACTCACAGAGCAGCAGCAGTGGTCCTCGAA...GCCACTGAAGAGACCCCCAAGGCCAGCAACAAGATTCCCTCTCTGGCTCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR GCA 90 bp | CTGAGGAGCCAGAGAGGGAATCTTGTTGCTGGCCTTGGGGGTCTCTTCAGTGGCCCAGAGCCGACTTGCTaGAGATCCAAAAAGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRSQRGNLVAGLGGLFSGPEPTC*RSKKAE Trigger: CTCCGCCTTTTTGGATCTGCAGCAAGTCGGCTCTGG...GCCACTGAAGAGACCCCCAAGGCCAGCAACAAGATTCCCTCTCTGGCTCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCCCATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCACCATCTCTCGCCCTaGTCCCCTTTGGTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVPMTTTDGQRLWQRWVVHHLSP*SPLVWL Trigger: CAGCCACACCAAAGGGGAGCAGGGCGAGAGATGGTG...CACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATGGGGACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR CCA 90 bp | ATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCCCCAAGGAATCCGACTaGGGTGACTCTGGGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MTTTDGQRLWQRWVVRLAPKESD*GDSGGV Trigger: AACACCCCCAGAGTCACCCCAGTCGGATTCCTTGGG...GGCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGTCAAGGGCCTCGAGATaGTGCTGGCTGAAGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPHDNYRWSKAVAEVGGASRASR*CWLKVS Trigger: GGACACCTTCAGCCAGCACCATCTCGAGGCCCTTGA...CGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATGGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR CCA 90 bp | CACTGTCCCCATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTTGCCCTGTCCACTGGTaGGGATGTGGGGTGGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: HCPHDNYRWSKAVAEVGGCPVHW*GCGVGI Trigger: GATACCCACCCCACATCCCCACCAGTGGACAGGGCA...ACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATGGGGACAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| 3UTR CAA 72 bp | GCTGCGCGGGCTGGAACTGCAGAAAGCACACTTGAATaGGCAAGGCTGTTGAGGAGAGGACATGGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AARAGTAESTLE*ARLLRRGHGWS Trigger: GGACCAGCCATGTCCTCTCCTCAACAGCCTTGCCAATTCAAGTGTGCTTTCTGCAGTTCCAGCCCGCGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR TCA 90 bp | TGTCCCCATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGTTACACAGCCATGGCTaGCACGGAGCTGGCGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CPHDNYRWSKAVAEVGGALHSHG*HGAGEK Trigger: TTTCTCGCCAGCTCCGTGTCAGCCATGGCTGTGTAA...CGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATGGGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
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| CDS-3UTR GCA 90 bp | CTGAGGAGCCAGAGAGGGAATCTTGTTGCTGGCCTTGGGGGTCTCTTCAGTGGCTGCTCTGTGAGTCGATaGTTAGCCGACAGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRSQRGNLVAGLGGLFSGCSVSR*LADSCP Trigger: AGGACAGCTGTCGGCTAAGCATCGACTCACAGAGCA...GCCACTGAAGAGACCCCCAAGGCCAGCAACAAGATTCCCTCTCTGGCTCCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| CDS-3UTR GCA 90 bp | CATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCTTCGAGGACCACTGCTaGTGCTCTGTGAGTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: HDNYRWSKAVAEVGGALGFEDHC*CSVSRC Trigger: GCATCGACTCACAGAGCAGCAGCAGTGGTCCTCGAA...GCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR CCA 90 bp | GACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCTTTGGCTGACACGGAGCTaGCGAGAAATATCACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DNYRWSKAVAEVGGALGLWLTRS*REISQG Trigger: GCCCTGTGATATTTCTCGCCAGCTCCGTGTCAGCCA...AAGGCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
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| CDS-3UTR CCA 90 bp | CCCATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGCTGGGCTCAGAGACTTaGTGGCCACACAGCTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PMTTTDGQRLWQRWVVRLLGSET*WPHSYP Trigger: TGGATAGCTGTGTGGCCACCAAGTCTCTGAGCCCAG...CAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGAGCCAGAGAGGGAATCTTGTTGCTGGCCTTGGGGGTCTCTTCAGTGGCGTCCCAGAGGTGTATTaGAAGATGTCAGGGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRSQRGNLVAGLGGLFSGVPEVY*KMSGWP Trigger: AGGCCACCCTGACATCTTCCAATACACCTCTGGGAC...GCCACTGAAGAGACCCCCAAGGCCAGCAACAAGATTCCCTCTCTGGCTCCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CCA 90 bp | TGTCTAGATGAAGACCAAACAGGTGGCCCTGTACACCCTCAGACTCATCTCCCTAGGCTGTGGCAGAGGTaGGTGGTGCGCTTGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLDEDQTGGPVHPQTHLPRLWQR*VVRLAL Trigger: CAAGGCCAAGCGCACCACCCACCTCTGCCACAGCCT...AGGGAGATGAGTCTGAGGGTGTACAGGGCCACCTGTTTGGTCTTCATCTAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR TCA 90 bp | AACAGGTGGCCCTGTACACCCTCAGACTCATCTCCCTCTAAGTTCTTCGTGAACGGAATCCGACTGGGGTaGCTCTGGGGGTGTTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NRWPCTPSDSSPSKFFVNGIRLG*LWGCYS Trigger: GCTGTAACACCCCCAGAGTCACCCCAGTCGGATTCC...GTTCACGAAGAACTTAGAGGGAGATGAGTCTGAGGGTGTACAGGGCCACCTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR TCA 90 bp | TCATTTACGGTATTTACAGTGAGGTTGTATGTGGGGAAAGAGCTGAGGAGCCAGGGAGGGCCTGGCCCGTaGACTGCCCATACACGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFTVFTVRLYVGKELRSQGGPGP*TAHTRR Trigger: CCTCCGTGTATGGGCAGTTCACGGGCCAGGCCCTCC...CTGGCTCCTCAGCTCTTTCCCCACATACAACCTCACTGTAAATACCGTAAATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR GCA 90 bp | ACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCTTGTGCTCTGTGAGTCGATaGTTAGCCGACAGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTTDGQRLWQRWVVRLALCSVSR*LADSCP Trigger: AGGACAGCTGTCGGCTAAGCATCGACTCACAGAGCA...CAAGGCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCCCATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGGCTTTCGAGGACCACTaGTGCTGCTCTGTGAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TVPMTTTDGQRLWQRWVVAFEDH*CCSVSR Trigger: TCGACTCACAGAGCAGCAGCAGTGGTCCTCGAAAGC...CACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATGGGGACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR GCA 90 bp | AACAGGTGGCCCTGTACACCCTCAGACTCATCTCCCTCTAAGTTCTTCGTGAACCTTCTGGCAGAGGCCTaGCATTCACAAAGGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NRWPCTPSDSSPSKFFVNLLAEA*HSQRPL Trigger: GAGGGGCCTTTGTGAATGGCAGGCCTCTGCCAGAAG...GTTCACGAAGAACTTAGAGGGAGATGAGTCTGAGGGTGTACAGGGCCACCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| CDS-3UTR GCA 90 bp | GTTGTGTCTTCCTATGTTCTACGTAGAGCCTCACTGAACTTTCCAGGGGACAGGAGTGGGTACAGCCCCTaGTCCCCTTTGGTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVSSYVLRRASLNFPGDRSGYSP*SPLVWL Trigger: CAGCCACACCAAAGGGGAGCAGGGGCTGTACCCACT...CCTGTCCCCTGGAAAGTTCAGTGAGGCTCTACGTAGAACATAGGAAGACACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CCA 90 bp | CATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCTTGACGTACAACTTCTaGCAGAGGCCTGCCATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HDNYRWSKAVAEVGGALGLTYNF*QRPAIH Trigger: GTGAATGGCAGGCCTCTGCCAGAAGTTGTACGTCAA...GCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
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| CDS-3UTR CCA 90 bp | GTTGTGTCTTCCTATGTTCTACGTAGAGCCTCACTGAACTTTCCAGGGGACAGGTCTTCTCCACCACCTTaGGGGTGGCCACCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VVSSYVLRRASLNFPGDRSSPPP*GWPPWA Trigger: AGCCCAAGGTGGCCACCCCCAAGGTGGTGGAGAAGA...CCTGTCCCCTGGAAAGTTCAGTGAGGCTCTACGTAGAACATAGGAAGACACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CCA 90 bp | TACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCTTGATGTAGTGTTACAGCTGAGCTaGGGATCAGTGTGTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YRWSKAVAEVGGALGLDVVLQLS*GSVCVL Trigger: CAGGACACACACTGATCCCCAGCTCAGCTGTAACAC...TACATCAAGGCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR GCA 90 bp | ATTTACGGTATTTACAGTGAGGTTGTATGTGGGGAAAGAGCTGAGGAGCCAGAGGCCTGGCCCGTGAACTaGCCATACACGGAGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IYGIYSEVVCGERAEEPEAWPVN*PYTEAA Trigger: TGCTGCCTCCGTGTATGGGCAGTTCACGGGCCAGGC...CTCTGGCTCCTCAGCTCTTTCCCCACATACAACCTCACTGTAAATACCGTAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CCA 90 bp | GTTGTGTCTTCCTATGTTCTACGTAGAGCCTCACTGAACTTTCCAGGGGACAGGCCCAAGGAATCCGACTaGGGTGACTCTGGGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VVSSYVLRRASLNFPGDRPKESD*GDSGGV Trigger: AACACCCCCAGAGTCACCCCAGTCGGATTCCTTGGG...CCTGTCCCCTGGAAAGTTCAGTGAGGCTCTACGTAGAACATAGGAAGACACAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CCA 90 bp | GATATTTCAGAGACCAAAGACTGGGGGATGGAAAGAGGAAAGCTTGACCGAAACCCTGAGAGGAGGGCCTaGCCCGTGAACTGCCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: DISETKDWGMERGKLDRNPERRA*PVNCPY Trigger: GTATGGGCAGTTCACGGGCCAGGCCCTCCTCTCAGG...GTTTCGGTCAAGCTTTCCTCTTTCCATCCCCCAGTCTTTGGTCTCTGAAATATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR TCA 90 bp | TGTCTAGATGAAGACCAAACAGGTGGCCCTGTACACCCTCAGACTCATCTCCCTTATCCATGGGGAGGTTaGATGGCTGCTGCACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLDEDQTGGPVHPQTHLPYPWGG*MAAALW Trigger: CCAAAGTGCAGCAGCCATTCAACCTCCCCATGGATA...AGGGAGATGAGTCTGAGGGTGTACAGGGCCACCTGTTTGGTCTTCATCTAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR TCA 90 bp | AGACCAAAGACTGGGGGATGGAAAGAGGAAAGCTTGACCGAAACAGAGTTTCATCATGGGGAAAGGCATTaGAGGGTGGGACCGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RPKTGGWKEESLTETEFHHGERH*RVGPRH Trigger: GTGCCTCGGTCCCACCCTTCAATGCCTTTCCCCATG...ATGAAACTCTGTTTCGGTCAAGCTTTCCTCTTTCCATCCCCCAGTCTTTGGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CCA 90 bp | GTTGTGTCTTCCTATGTTCTACGTAGAGCCTCACTGAACTTTCCAGGGGACAGGTGGCTGACACGGAGCTaGCGAGAAATATCACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VVSSYVLRRASLNFPGDRWLTRS*REISQG Trigger: GCCCTGTGATATTTCTCGCCAGCTCCGTGTCAGCCA...CCTGTCCCCTGGAAAGTTCAGTGAGGCTCTACGTAGAACATAGGAAGACACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CCA 90 bp | GTTGTGTCTTCCTATGTTCTACGTAGAGCCTCACTGAACTTTCCAGGGGACAGGTTGCTTACACAGCCATaGCTGACACGGAGCTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VVSSYVLRRASLNFPGDRLLTQP*LTRSWR Trigger: TCGCCAGCTCCGTGTCAGCCATGGCTGTGTAAGCAA...CCTGTCCCCTGGAAAGTTCAGTGAGGCTCTACGTAGAACATAGGAAGACACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CCA 90 bp | TGGGTGCCAGCTTCGGTACATTTCTCCTCTGTGTCTCTTTTGAAATGGGTGGTTTCAAGGGCCTCGAGATaGTGCTGGCTGAAGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WVPASVHFSSVSLLKWVVSRASR*CWLKVS Trigger: GGACACCTTCAGCCAGCACCATCTCGAGGCCCTTGA...AACCACCCATTTCAAAAGAGACACAGAGGAGAAATGTACCGAAGCTGGCACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR TCA 90 bp | ATTTACGGTATTTACAGTGAGGTTGTATGTGGGGAAAGAGCTGAGGAGCCAGAGCGAGATGGTGCTGGCTaGAGGTGTCCGTACGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IYGIYSEVVCGERAEEPERDGAG*RCPYEG Trigger: ACCTTCGTACGGACACCTTCAGCCAGCACCATCTCG...CTCTGGCTCCTCAGCTCTTTCCCCACATACAACCTCACTGTAAATACCGTAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR TCA 90 bp | TCATTTACGGTATTTACAGTGAGGTTGTATGTGGGGAAAGAGCTGAGGAGCCAGATGGCGAAGGGTGAATaGGGATCTGCCACCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFTVFTVRLYVGKELRSQMAKGE*GSATTG Trigger: CCCTGTGGTGGCAGATCCTCATTCACCCTTCGCCAT...CTGGCTCCTCAGCTCTTTCCCCACATACAACCTCACTGTAAATACCGTAAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR TCA 90 bp | GTTGTGTCTTCCTATGTTCTACGTAGAGCCTCACTGAACTTTCCAGGGGACAGGCTTTATGGCGAAGGGTaGATGAGGATCTGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: VVSSYVLRRASLNFPGDRLYGEG*MRICHH Trigger: GTGGTGGCAGATCCTCATTCACCCTTCGCCATAAAG...CCTGTCCCCTGGAAAGTTCAGTGAGGCTCTACGTAGAACATAGGAAGACACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR GCA 90 bp | AGACCAAAGACTGGGGGATGGAAAGAGGAAAGCTTGACCGAAACAGAGTTTCATTCACTCCAGGCCGGATaGTGCCAGTCTCGTAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: RPKTGGWKEESLTETEFHSLQAG*CQSRST Trigger: GGTACTACGAGACTGGCAGCATCCGGCCTGGAGTGA...ATGAAACTCTGTTTCGGTCAAGCTTTCCTCTTTCCATCCCCCAGTCTTTGGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR GCA 90 bp | TGGGTGCCAGCTTCGGTACATTTCTCCTCTGTGTCTCTTTTGAAATGGGTGGTTGCTTTCGAGGACCACTaGTGCTGCTCTGTGAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WVPASVHFSSVSLLKWVVAFEDH*CCSVSR Trigger: TCGACTCACAGAGCAGCAGCAGTGGTCCTCGAAAGC...AACCACCCATTTCAAAAGAGACACAGAGGAGAAATGTACCGAAGCTGGCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR GCA 90 bp | AACAGGTGGCCCTGTACACCCTCAGACTCATCTCCCTCTAAGTTCTTCGTGAACAGCTCTGGGGTTTCCTaGTTTATGGCGAAGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NRWPCTPSDSSPSKFFVNSSGVS*FMAKGE Trigger: TTCACCCTTCGCCATAAAGCAGGAAACCCCAGAGCT...GTTCACGAAGAACTTAGAGGGAGATGAGTCTGAGGGTGTACAGGGCCACCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CCA 90 bp | TGGGTGCCAGCTTCGGTACATTTCTCCTCTGTGTCTCTTTTGAAATGGGTGGTTCTGGGCTCAGAGACTTaGTGGCCACACAGCTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVPASVHFSSVSLLKWVVLGSET*WPHSYP Trigger: TGGATAGCTGTGTGGCCACCAAGTCTCTGAGCCCAG...AACCACCCATTTCAAAAGAGACACAGAGGAGAAATGTACCGAAGCTGGCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR GCA 90 bp | AGTTTCATTTACGGTATTTACAGTGAGGTTGTATGTGGGGAAAGAGCTGAGGAGGTCACAAACGCCTTCTaGCAGGAGCCGGTCCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SFIYGIYSEVVCGERAEEVTNAF*QEPVPD Trigger: ATCCGGGACCGGCTCCTGGCAGAAGGCGTTTGTGAC...CTCCTCAGCTCTTTCCCCACATACAACCTCACTGTAAATACCGTAAATGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR GCA 90 bp | TCATTTACGGTATTTACAGTGAGGTTGTATGTGGGGAAAGAGCTGAGGAGCCAGGGTGAGTCGAGAGGTTaGGTCCCAGAGGTGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFTVFTVRLYVGKELRSQGESRG*VPEVYW Trigger: CCAATACACCTCTGGGACGCAACCTCTCGACTCACC...CTGGCTCCTCAGCTCTTTCCCCACATACAACCTCACTGTAAATACCGTAAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CCA 90 bp | TGTCTAGATGAAGACCAAACAGGTGGCCCTGTACACCCTCAGACTCATCTCCCTGGGTTTCCTGCTTTATaGCGAAGGGTGAATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CLDEDQTGGPVHPQTHLPGFPAL*RRVNED Trigger: ATCCTCATTCACCCTTCGCCATAAAGCAGGAAACCC...AGGGAGATGAGTCTGAGGGTGTACAGGGCCACCTGTTTGGTCTTCATCTAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR TCA 90 bp | ACCACACAGGGAGTGAGCGGCAATGCTGGAATTGTGGTTATTTTTCATGTAATATGGGGGTGTTACAGCTaGGCTGGGGATCAGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTQGVSGNAGIVVIFHVIWGCYS*AGDQCV Trigger: CACACACTGATCCCCAGCTCAGCTGTAACACCCCCA...TATTACATGAAAAATAACCACAATTCCAGCATTGCCGCTCACTCCCTGTGTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CCA 90 bp | TGGGTGCCAGCTTCGGTACATTTCTCCTCTGTGTCTCTTTTGAAATGGGTGGTTTTGACGTACAACTTCTaGCAGAGGCCTGCCATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WVPASVHFSSVSLLKWVVLTYNF*QRPAIH Trigger: GTGAATGGCAGGCCTCTGCCAGAAGTTGTACGTCAA...AACCACCCATTTCAAAAGAGACACAGAGGAGAAATGTACCGAAGCTGGCACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CCA 90 bp | AGACCAAAGACTGGGGGATGGAAAGAGGAAAGCTTGACCGAAACAGAGTTTCATGTGTTACAGCTGAGCTaGGGATCAGTGTGTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPKTGGWKEESLTETEFHVLQLS*GSVCVL Trigger: CAGGACACACACTGATCCCCAGCTCAGCTGTAACAC...ATGAAACTCTGTTTCGGTCAAGCTTTCCTCTTTCCATCCCCCAGTCTTTGGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR TCA 90 bp | ACCACACAGGGAGTGAGCGGCAATGCTGGAATTGTGGTTATTTTTCATGTAATATTACACAGCCATGGCTaGCACGGAGCTGGCGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TTQGVSGNAGIVVIFHVILHSHG*HGAGEK Trigger: TTTCTCGCCAGCTCCGTGTCAGCCATGGCTGTGTAA...TATTACATGAAAAATAACCACAATTCCAGCATTGCCGCTCACTCCCTGTGTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR TCA 90 bp | AGTTTCATTTACGGTATTTACAGTGAGGTTGTATGTGGGGAAAGAGCTGAGGAGCATCCAGGGCACTGTTaGGTAAGGGCAGTGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SFIYGIYSEVVCGERAEEHPGHC*VRAVGT Trigger: TGTACCCACTGCCCTTACTCAACAGTGCCCTGGATG...CTCCTCAGCTCTTTCCCCACATACAACCTCACTGTAAATACCGTAAATGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR GCA 90 bp | CTTTTGAAATGGGTGGTTCTTGTTTCCTGGAACTCCTGTCACTCACAAAATGAACCCCCAGAGCCGACTTaGTGCAGATCCAAAAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLKWVVLVSWNSCHSQNEPPEPT*CRSKKA Trigger: CGCCTTTTTGGATCTGCAGCAAGTCGGCTCTGGGGG...TTCATTTTGTGAGTGACAGGAGTTCCAGGAAACAAGAACCACCCATTTCAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CCA 90 bp | ATTTACGGTATTTACAGTGAGGTTGTATGTGGGGAAAGAGCTGAGGAGCCAGAGAGAACTGGAGAGCTCTaGGGTTTCCTGCTTTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: IYGIYSEVVCGERAEEPERTGEL*GFLLYG Trigger: GCCATAAAGCAGGAAACCCCAGAGCTCTCCAGTTCT...CTCTGGCTCCTCAGCTCTTTCCCCACATACAACCTCACTGTAAATACCGTAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CCA 90 bp | GTTGTGTCTTCCTATGTTCTACGTAGAGCCTCACTGAACTTTCCAGGGGACAGGAGAGCTGTAATAATATaGAGAACTCAGCAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVSSYVLRRASLNFPGDRRAVII*RTQQAG Trigger: TCCAGCCTGCTGAGTTCTCCATATTATTACAGCTCT...CCTGTCCCCTGGAAAGTTCAGTGAGGCTCTACGTAGAACATAGGAAGACACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| 3UTR CAA 72 bp | CGAAACAGAGTTTCATTTACGGTATTTACAGTGAGGTaGTATGTGGGGAAAGAGCTGAGGAGCCAGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RNRVSFTVFTVR*YVGKELRSQRG Trigger: CCCTCTCTGGCTCCTCAGCTCTTTCCCCACATACAACCTCACTGTAAATACCGTAAATGAAACTCTGTTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| 3UTR CAA 72 bp | CAGAGACCAAAGACTGGGGGATGGAAAGAGGAAAGCTaGACCGAAACAGAGTTTCATTTACGGTATTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: QRPKTGGWKEES*TETEFHLRYLQ Trigger: CTGTAAATACCGTAAATGAAACTCTGTTTCGGTCAAGCTTTCCTCTTTCCATCCCCCAGTCTTTGGTCTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR TCA 90 bp | ACCACACAGGGAGTGAGCGGCAATGCTGGAATTGTGGTTATTTTTCATGTAATATGGTGCGCTTGGCCTTaGTGTAGAGCTGTAATAATA | + |
|
Preference number: 4 (lower is better) Translates to: TTQGVSGNAGIVVIFHVIWCAWP*CRAVII Trigger: TATTATTACAGCTCTACATCAAGGCCAAGCGCACCA...TATTACATGAAAAATAACCACAATTCCAGCATTGCCGCTCACTCCCTGTGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS CCA 90 bp | GAGAGGAGGGCCTGGCCCGTGAACTGCCCATACACGGAGGCAGCATaGGGAAAGGCATTGAAGGGTGGGACCGAGGCACCTGCTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ERRAWPVNCPYTEAA*GKALKGGTEAPAGP Trigger: GGGCCCAGCAGGTGCCTCGGTCCCACCCTTCAATGCCTTTCCCCATGCTGCCTCCGTGTATGGGCAGTTCACGGGCCAGGCCCTCCTCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 |
||
| CDS GCA 90 bp | GGCCCCACCATCTCTCGCCCTGAGAGGAGGGCCTGGCCCGTGAACTaGCCATACACGGAGGCAGCATGGGGAAAGGCATTGAAGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GPTISRPERRAWPVN*PYTEAAWGKALKGG Trigger: CCCACCCTTCAATGCCTTTCCCCATGCTGCCTCCGTGTATGGGCAGTTCACGGGCCAGGCCCTCCTCTCAGGGCGAGAGATGGTGGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 |
||
| CDS GCA 90 bp | AAGGGTGGGACCGAGGCACCTGCTGGGCCCCCAGAGCCGACTTGCTaGAGATCCAAAAAGGCGGAGCTGCCACCACAGGGTAGGTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KGGTEAPAGPPEPTC*RSKKAELPPQGRSG Trigger: ACCAGACCTACCCTGTGGTGGCAGCTCCGCCTTTTTGGATCTGCAGCAAGTCGGCTCTGGGGGCCCAGCAGGTGCCTCGGTCCCACCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149294.8 |
||
| CDS CCA 90 bp | GAACTGCCCATACACGGAGGCAGCATGGGGAAAGGCATTGAAGGGTaGGACCGAGGCACCTGCTGGGCCCCCAGAGCCGACTTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ELPIHGGSMGKGIEG*DRGTCWAPRADLLQ Trigger: CTGCAGCAAGTCGGCTCTGGGGGCCCAGCAGGTGCCTCGGTCCCACCCTTCAATGCCTTTCCCCATGCTGCCTCCGTGTATGGGCAGTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 |
||
| CDS GCA 90 bp | TTGAAGGGTGGGACCGAGGCACCTGCTGGGCCCCCAGAGCCGACTTaGTGCAGATCCAAAAAGGCGGAGCTGCCACCACAGGGTAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LKGGTEAPAGPPEPT*CRSKKAELPPQGRS Trigger: AGACCTACCCTGTGGTGGCAGCTCCGCCTTTTTGGATCTGCAGCAAGTCGGCTCTGGGGGCCCAGCAGGTGCCTCGGTCCCACCCTTCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149294.8 |
||
| CDS TCA 90 bp | GCTGCCGCTCAAACGGGCACTCAAGGGCCTCGAGATGGTGCTGGCTaGAGGTGTCCGTACGAAGGTGCTTTCGAGGACCACTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AAAQTGTQGPRDGAG*RCPYEGAFEDHCCC Trigger: GCAGCAGCAGTGGTCCTCGAAAGCACCTTCGTACGGACACCTTCAGCCAGCACCATCTCGAGGCCCTTGAGTGCCCGTTTGAGCGGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 ENSMUST00000153601.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCCATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCGTGGCCACCTTGGGCTaGGAGCCCCCTATCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VPMTTTDGQRLWQRWVVRVATLG*EPPITP Trigger: TGGAGTGATAGGGGGCTCCAAGCCCAAGGTGGCCAC...GCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCATGGGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGGAGCCAGAGAGGGAATCTTGTTGCTGGCCTTGGGGGTCTCTTCAGTGGCATCTTCTCCACCACCTaGGGGGTGGCCACCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRSQRGNLVAGLGGLFSGIFSTT*GVATLG Trigger: GCCCAAGGTGGCCACCCCCAAGGTGGTGGAGAAGAT...GCCACTGAAGAGACCCCCAAGGCCAGCAACAAGATTCCCTCTCTGGCTCCTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CAA 90 bp | ACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCTTGATGATCTTCTCCACCACCTaGGGGGTGGCCACCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TTDGQRLWQRWVVRLALMIFSTT*GVATLG Trigger: GCCCAAGGTGGCCACCCCCAAGGTGGTGGAGAAGAT...CATCAAGGCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS GCA 90 bp | AAGGCGGAGCTGCCACCACAGGGTAGGTCTGGTGAGTCGAGAGGTTaGGTCCCAGAGGTGTATTGGAAGATGTCAGGGTGGCCTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KAELPPQGRSGESRG*VPEVYWKMSGWPSH Trigger: ATGGGAAGGCCACCCTGACATCTTCCAATACACCTCTGGGACGCAACCTCTCGACTCACCAGACCTACCCTGTGGTGGCAGCTCCGCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149294.8 |
||
| CDS-3UTR CAA 90 bp | GACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCTTCCTGGGCTCAGAGACTaGGTGGCCACACAGCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: DNYRWSKAVAEVGGALGLPGLRD*VATQLS Trigger: GGATAGCTGTGTGGCCACCAAGTCTCTGAGCCCAGG...AAGGCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS TCA 90 bp | TATTGGAAGATGTCAGGGTGGCCTTCCCATCATCCAGGGCACTGTTaGGTAAGGGCAGTGGGTACAGCCCCTGCTCCCCTTTGGTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: YWKMSGWPSHHPGHC*VRAVGTAPAPLWCG Trigger: GCCACACCAAAGGGGAGCAGGGGCTGTACCCACTGCCCTTACTCAACAGTGCCCTGGATGATGGGAAGGCCACCCTGACATCTTCCAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 |
||
| CDS GCA 90 bp | TCAAGGGCCTCGAGATGGTGCTGGCTGAAGGTGTCCGTACGAAGGTaGTTTCGAGGACCACTGCTGCTGCTCTGTGAGTCGATGCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRASRWCWLKVSVRR*FRGPLLLLCESMLS Trigger: GCTAAGCATCGACTCACAGAGCAGCAGCAGTGGTCCTCGAAAGCACCTTCGTACGGACACCTTCAGCCAGCACCATCTCGAGGCCCTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 ENSMUST00000153601.8 |
||
| CDS GCA 90 bp | AATGAGGATCTGCCACCACAGGGTAGGTCTGGTGAGTCGAGAGGTTaGGTCCCAGAGGTGTATTGGAAGATGTCAGGGTGGCCTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NEDLPPQGRSGESRG*VPEVYWKMSGWPSH Trigger: ATGGGAAGGCCACCCTGACATCTTCCAATACACCTCTGGGACGCAACCTCTCGACTCACCAGACCTACCCTGTGGTGGCAGATCCTCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 |
||
| CDS-3UTR CAA 90 bp | AACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCTTGATGTCCGGATGATTCTGTaGATGGAGCTGACACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NYRWSKAVAEVGGALGLDVRMIL*MELTLG Trigger: CCCCAGTGTCAGCTCCATCAACAGAATCATCCGGAC...ATCAAGGCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS-3UTR CAA 90 bp | ATGACAACTACAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCCTATCCATGGGGAGGTaGAATGGCTGCTGCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: MTTTDGQRLWQRWVVRLALSMGR*NGCCTL Trigger: CAAAGTGCAGCAGCCATTCAACCTCCCCATGGATAG...GGCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTGTAGTTGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153601.8 |
||
| CDS TCA 90 bp | CAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCTTaGTGTAGAGCTGTAATAATATGGAGAACCTGCCACCATGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QMVKGCGRGGWCAWP*CRAVIIWRTCHHAC Trigger: GCAGGCATGGTGGCAGGTTCTCCATATTATTACAGCTCTACATCAAGGCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149294.8 |
||
| CDS-3UTR CAA 90 bp | GATATTTCAGAGACCAAAGACTGGGGGATGGAAAGAGGAAAGCTTGACCGAAACGTGGCCACCTTGGGCTaGGAGCCCCCTATCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DISETKDWGMERGKLDRNVATLG*EPPITP Trigger: TGGAGTGATAGGGGGCTCCAAGCCCAAGGTGGCCAC...GTTTCGGTCAAGCTTTCCTCTTTCCATCCCCCAGTCTTTGGTCTCTGAAATATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CAA 90 bp | AACAGGTGGCCCTGTACACCCTCAGACTCATCTCCCTCTAAGTTCTTCGTGAACGTCCGGATGATTCTGTaGATGGAGCTGACACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NRWPCTPSDSSPSKFFVNVRMIL*MELTLG Trigger: CCCCAGTGTCAGCTCCATCAACAGAATCATCCGGAC...GTTCACGAAGAACTTAGAGGGAGATGAGTCTGAGGGTGTACAGGGCCACCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS TCA 90 bp | CAGATGGTCAAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCTTaGTGTAGAGCTGTAATAATATGGAGAACTCAGCAGGCTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QMVKGCGRGGWCAWP*CRAVIIWRTQQAGV Trigger: AACTCCAGCCTGCTGAGTTCTCCATATTATTACAGCTCTACATCAAGGCCAAGCGCACCACCCACCTCTGCCACAGCCTTTGACCATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CAA 90 bp | AGACCAAAGACTGGGGGATGGAAAGAGGAAAGCTTGACCGAAACAGAGTTTCATGCCCCCAGAGCCGACTaGCTGCAGATCCAAAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPKTGGWKEESLTETEFHAPRAD*LQIQKG Trigger: GCCTTTTTGGATCTGCAGCAAGTCGGCTCTGGGGGC...ATGAAACTCTGTTTCGGTCAAGCTTTCCTCTTTCCATCCCCCAGTCTTTGGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CAA 90 bp | TGGGTGCCAGCTTCGGTACATTTCTCCTCTGTGTCTCTTTTGAAATGGGTGGTTCTGGGGACAGTGTCATaGTCACAAACGCCTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: WVPASVHFSSVSLLKWVVLGTVS*SQTPSA Trigger: GGCAGAAGGCGTTTGTGACAATGACACTGTCCCCAG...AACCACCCATTTCAAAAGAGACACAGAGGAGAAATGTACCGAAGCTGGCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CAA 90 bp | CTTTTGAAATGGGTGGTTCTTGTTTCCTGGAACTCCTGTCACTCACAAAATGAACCTGGGCTCAGAGACTaGGTGGCCACACAGCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: LLKWVVLVSWNSCHSQNEPGLRD*VATQLS Trigger: GGATAGCTGTGTGGCCACCAAGTCTCTGAGCCCAGG...TTCATTTTGTGAGTGACAGGAGTTCCAGGAAACAAGAACCACCCATTTCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS-3UTR CAA 90 bp | TCTGTGTCTCTTTTGAAATGGGTGGTTCTTGTTTCCTGGAACTCCTGTCACTCACTATCCATGGGGAGGTaGAATGGCTGCTGCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVSLLKWVVLVSWNSCHSLSMGR*NGCCTL Trigger: CAAAGTGCAGCAGCCATTCAACCTCCCCATGGATAG...TGAGTGACAGGAGTTCCAGGAAACAAGAACCACCCATTTCAAAAGAGACACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
||
| CDS GCA 72 bp | GGGACCGAGGCACCTGCTGGGCCCCCAGAGCCGACTTaGTGCAGATCCAAAAAGGCGGAGCTGCCACCACAG | + |
|
Preference number: 6 (lower is better) Translates to: GTEAPAGPPEPT*CRSKKAELPPQ Trigger: CTGTGGTGGCAGCTCCGCCTTTTTGGATCTGCAGCAAGTCGGCTCTGGGGGCCCAGCAGGTGCCTCGGTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149294.8 |
||
| CDS CAA 90 bp | TGGCCCGTGAACTGCCCATACACGGAGGCAGCATGGGGAAAGGCATaGAAGGGTGGGACCGAGGCACCTGCTGGGCCCCCAGAGCCGACT | + |
|
Preference number: 6 (lower is better) Translates to: WPVNCPYTEAAWGKA*KGGTEAPAGPPEPT Trigger: AGTCGGCTCTGGGGGCCCAGCAGGTGCCTCGGTCCCACCCTTCAATGCCTTTCCCCATGCTGCCTCCGTGTATGGGCAGTTCACGGGCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 |
||
| CDS TCA 72 bp | CCACCATCTCTCGCCCTGAGAGGAGGGCCTGGCCCGTaGACTGCCCATACACGGAGGCAGCATGGGGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PPSLALRGGPGP*TAHTRRQHGER Trigger: CCTTTCCCCATGCTGCCTCCGTGTATGGGCAGTTCACGGGCCAGGCCCTCCTCTCAGGGCGAGAGATGGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 |
||
| CDS GCA 72 bp | ACCGAGGCACCTGCTGGGCCCCCAGAGCCGACTTGCTaGAGATCCAAAAAGGCGGAGCTGCCACCACAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: TEAPAGPPEPTC*RSKKAELPPQG Trigger: ACCCTGTGGTGGCAGCTCCGCCTTTTTGGATCTGCAGCAAGTCGGCTCTGGGGGCCCAGCAGGTGCCTCGGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149294.8 |
||
| CDS CAA 72 bp | TGGGACCGAGGCACCTGCTGGGCCCCCAGAGCCGACTaGCTGCAGATCCAAAAAGGCGGAGCTGCCACCACA | + |
|
Preference number: 6 (lower is better) Translates to: WDRGTCWAPRAD*LQIQKGGAATT Trigger: TGTGGTGGCAGCTCCGCCTTTTTGGATCTGCAGCAAGTCGGCTCTGGGGGCCCAGCAGGTGCCTCGGTCCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149294.8 |
||
| CDS CCA 72 bp | GCCTGGCCCGTGAACTGCCCATACACGGAGGCAGCATaGGGAAAGGCATTGAAGGGTGGGACCGAGGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: AWPVNCPYTEAA*GKALKGGTEAP Trigger: AGGTGCCTCGGTCCCACCCTTCAATGCCTTTCCCCATGCTGCCTCCGTGTATGGGCAGTTCACGGGCCAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 |
||
| CDS CAA 72 bp | ATCTTCTCCACCACCTTGGGGGTGGCCACCTTGGGCTaGGAGCCCCCTATCACTCCAGGCCGGATGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: IFSTTLGVATLG*EPPITPGRMLP Trigger: TGGCAGCATCCGGCCTGGAGTGATAGGGGGCTCCAAGCCCAAGGTGGCCACCCCCAAGGTGGTGGAGAAGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 ENSMUST00000153535.2 ENSMUST00000153601.8 |
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| CDS GCA 72 bp | ATGGGGAAAGGCATTGAAGGGTGGGACCGAGGCACCTaGTGGGCCCCCAGAGCCGACTTGCTGCAGATCCAA | + |
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Preference number: 6 (lower is better) Translates to: MGKGIEGWDRGT*WAPRADLLQIQ Trigger: TTGGATCTGCAGCAAGTCGGCTCTGGGGGCCCAGCAGGTGCCTCGGTCCCACCCTTCAATGCCTTTCCCCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 |
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| CDS GCA 72 bp | ATCTCTCGCCCTGAGAGGAGGGCCTGGCCCGTGAACTaGCCATACACGGAGGCAGCATGGGGAAAGGCATTG | + |
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Preference number: 6 (lower is better) Translates to: ISRPERRAWPVN*PYTEAAWGKAL Trigger: CAATGCCTTTCCCCATGCTGCCTCCGTGTATGGGCAGTTCACGGGCCAGGCCCTCCTCTCAGGGCGAGAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 |
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| CDS GCA 72 bp | GGGACCGAGGCACCTGCTGGGCCCCCAGAGCCGACTTaGTGCAGATCCAAAAAGGCGGAGCTAGATAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: GTEAPAGPPEPT*CRSKKAELDKE Trigger: CTCTTTATCTAGCTCCGCCTTTTTGGATCTGCAGCAAGTCGGCTCTGGGGGCCCAGCAGGTGCCTCGGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 |
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| CDS CCA 72 bp | GGGAAAGGCATTGAAGGGTGGGACCGAGGCACCTGCTaGGCCCCCAGAGCCGACTTGCTGCAGATCCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: GKGIEGWDRGTC*APRADLLQIQK Trigger: TTTTTGGATCTGCAGCAAGTCGGCTCTGGGGGCCCAGCAGGTGCCTCGGTCCCACCCTTCAATGCCTTTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 |
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| CDS CAA 72 bp | GATGTCAGGGTGGCCTTCCCATCATCCAGGGCACTGTaGAGTAAGGGCAGTGGGTACAGCCCCTGCTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: DVRVAFPSSRAL*SKGSGYSPCSP Trigger: AGGGGAGCAGGGGCTGTACCCACTGCCCTTACTCAACAGTGCCCTGGATGATGGGAAGGCCACCCTGACATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 |
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| CDS TCA 72 bp | CAAACGGGCACTCAAGGGCCTCGAGATGGTGCTGGCTaGAGGTGTCCGTACGAAGGTGCTTTCGAGGACCAC | + |
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Preference number: 6 (lower is better) Translates to: QTGTQGPRDGAG*RCPYEGAFEDH Trigger: GTGGTCCTCGAAAGCACCTTCGTACGGACACCTTCAGCCAGCACCATCTCGAGGCCCTTGAGTGCCCGTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 ENSMUST00000153601.8 |
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| CDS TCA 72 bp | ATGTCAGGGTGGCCTTCCCATCATCCAGGGCACTGTTaGGTAAGGGCAGTGGGTACAGCCCCTGCTCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: MSGWPSHHPGHC*VRAVGTAPAPL Trigger: AAGGGGAGCAGGGGCTGTACCCACTGCCCTTACTCAACAGTGCCCTGGATGATGGGAAGGCCACCCTGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 |
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| CDS GCA 72 bp | TGCCGCTCAAACGGGCACTCAAGGGCCTCGAGATGGTaGTGGCTGAAGGTGTCCGTACGAAGGTGCTTTCGA | + |
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Preference number: 6 (lower is better) Translates to: CRSNGHSRASRW*WLKVSVRRCFR Trigger: TCGAAAGCACCTTCGTACGGACACCTTCAGCCAGCACCATCTCGAGGCCCTTGAGTGCCCGTTTGAGCGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 ENSMUST00000153601.8 |
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| CDS CCA 72 bp | CGCTCAAACGGGCACTCAAGGGCCTCGAGATGGTGCTaGCTGAAGGTGTCCGTACGAAGGTGCTTTCGAGGA | + |
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Preference number: 6 (lower is better) Translates to: RSNGHSRASRWC*LKVSVRRCFRG Trigger: TCCTCGAAAGCACCTTCGTACGGACACCTTCAGCCAGCACCATCTCGAGGCCCTTGAGTGCCCGTTTGAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 ENSMUST00000153601.8 |
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| CDS CAA 90 bp | GTTACAGCTGAGCTGGGGATCAGTGTGTGTCCTGGGCTCAGAGACTaGGTGGCCACACAGCTATCCATGGGGAGGTTGAATGGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: VTAELGISVCPGLRD*VATQLSMGRLNGCC Trigger: GCAGCAGCCATTCAACCTCCCCATGGATAGCTGTGTGGCCACCAAGTCTCTGAGCCCAGGACACACACTGATCCCCAGCTCAGCTGTAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 ENSMUST00000153535.2 ENSMUST00000153601.8 |
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| CDS CAA 90 bp | GTATTGGAAGATGTCAGGGTGGCCTTCCCATCATCCAGGGCACTGTaGAGTAAGGGCAGTGGGTACAGCCCCTGCTCCCCTTTGGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: VLEDVRVAFPSSRAL*SKGSGYSPCSPLVW Trigger: CCACACCAAAGGGGAGCAGGGGCTGTACCCACTGCCCTTACTCAACAGTGCCCTGGATGATGGGAAGGCCACCCTGACATCTTCCAATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 |
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| CDS GCA 72 bp | TCGAGATGGTGCTGGCTGAAGGTGTCCGTACGAAGGTaGTTTCGAGGACCACTGCTGCTGCTCTGTGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: SRWCWLKVSVRR*FRGPLLLLCES Trigger: CGACTCACAGAGCAGCAGCAGTGGTCCTCGAAAGCACCTTCGTACGGACACCTTCAGCCAGCACCATCTCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 ENSMUST00000153601.8 |
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| CDS GCA 72 bp | ACCGAGGCACCTGCTGGGCCCCCAGAGCCGACTTGCTaGAGATCCAAAAAGGCGGAGCTAGATAAAGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: TEAPAGPPEPTC*RSKKAELDKEE Trigger: TTCCTCTTTATCTAGCTCCGCCTTTTTGGATCTGCAGCAAGTCGGCTCTGGGGGCCCAGCAGGTGCCTCGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 |
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| CDS TCA 72 bp | GGAGAGCTCTGGGGTTTCCTGCTTTATGGCGAAGGGTaGATGAGGATCTGCCACCACAGGGTAGGTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: GELWGFLLYGEG*MRICHHRVGLV Trigger: CACCAGACCTACCCTGTGGTGGCAGATCCTCATTCACCCTTCGCCATAAAGCAGGAAACCCCAGAGCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 |
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| CDS GCA 72 bp | TGTCCGTACGAAGGTGCTTTCGAGGACCACTGCTGCTaGTCTGTGAGTCGATGCTTAGCCGACAGCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: CPYEGAFEDHCC*SVSRCLADSCP Trigger: AGGACAGCTGTCGGCTAAGCATCGACTCACAGAGCAGCAGCAGTGGTCCTCGAAAGCACCTTCGTACGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 ENSMUST00000153601.8 |
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| CDS GCA 72 bp | AGGTGTCCGTACGAAGGTGCTTTCGAGGACCACTGCTaGTGCTCTGTGAGTCGATGCTTAGCCGACAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RCPYEGAFEDHC*CSVSRCLADSC Trigger: ACAGCTGTCGGCTAAGCATCGACTCACAGAGCAGCAGCAGTGGTCCTCGAAAGCACCTTCGTACGGACACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 ENSMUST00000153601.8 |
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| CDS CCA 72 bp | TCTGGTGAGTCGAGAGGTTGCGTCCCAGAGGTGTATTaGAAGATGTCAGGGTGGCCTTCCCATCATCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SGESRGCVPEVY*KMSGWPSHHPG Trigger: CCCTGGATGATGGGAAGGCCACCCTGACATCTTCCAATACACCTCTGGGACGCAACCTCTCGACTCACCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 |
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| CDS CAA 72 bp | GAGCTGGGGATCAGTGTGTGTCCTGGGCTCAGAGACTaGGTGGCCACACAGCTATCCATGGGGAGGTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: ELGISVCPGLRD*VATQLSMGRLN Trigger: ATTCAACCTCCCCATGGATAGCTGTGTGGCCACCAAGTCTCTGAGCCCAGGACACACACTGATCCCCAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 ENSMUST00000153535.2 ENSMUST00000153601.8 |
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| CDS GCA 72 bp | GCTTTCGAGGACCACTGCTGCTGCTCTGTGAGTCGATaGTTAGCCGACAGCTGTCCTGGTCACTATCATCCA | + |
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Preference number: 6 (lower is better) Translates to: AFEDHCCCSVSR*LADSCPGHYHP Trigger: TGGATGATAGTGACCAGGACAGCTGTCGGCTAAGCATCGACTCACAGAGCAGCAGCAGTGGTCCTCGAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 ENSMUST00000153601.8 |
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| CDS GCA 72 bp | CCACAATGCGTTGACGTACAACTTCTGGCAGAGGCCTaGCATTCACAAAGGCCCCTCCTAGTTGATTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PQCVDVQLLAEA*HSQRPLLVDSA Trigger: GGCTGAATCAACTAGGAGGGGCCTTTGTGAATGGCAGGCCTCTGCCAGAAGTTGTACGTCAACGCATTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028355.11 ENSMUST00000136228.10 ENSMUST00000149294.8 ENSMUST00000153535.2 ENSMUST00000153601.8 |
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| CDS TCA 72 bp | AAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCTTaGTGTAGAGCTGTAATAATATGGAGAACCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: KGCGRGGWCAWP*CRAVIIWRTCH Trigger: GTGGCAGGTTCTCCATATTATTACAGCTCTACATCAAGGCCAAGCGCACCACCCACCTCTGCCACAGCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149294.8 |
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| CDS TCA 72 bp | AAAGGCTGTGGCAGAGGTGGGTGGTGCGCTTGGCCTTaGTGTAGAGCTGTAATAATATGGAGAACTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: KGCGRGGWCAWP*CRAVIIWRTQQ Trigger: CTGCTGAGTTCTCCATATTATTACAGCTCTACATCAAGGCCAAGCGCACCACCCACCTCTGCCACAGCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028355.11 |
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| CDS GCA 72 bp | AGAGCTGTAATAATATGGAGAACCTGCCACCATGCCTaGGATAGCAGAAGAGGCATAGCTGCCCTGTCCACT | + |
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Preference number: 6 (lower is better) Translates to: RAVIIWRTCHHA*DSRRGIAALST Trigger: AGTGGACAGGGCAGCTATGCCTCTTCTGCTATCGCAGGCATGGTGGCAGGTTCTCCATATTATTACAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149294.8 |
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