Pregenerated sensors for PAX7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028736Ensembl transcript IDs: ENSMUST00000030508.14, ENSMUST00000174681.2
Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCTCCGTCCTGGGCCACAGCCATCATCTGGCTGCGAAACCACCCTaGTCTCCTGTCTCCCTGGCTAGCTCCTCCCCTCACTCTTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: GSVLGHSHHLAAKPP*SPVSLASSSPHSSL Trigger: GAGAGAAGAGTGAGGGGAGGAGCTAGCCAGGGAGACAGGAGAGCAGGGTGGTTTCGCAGCCAGATGATGGCTGTGGCCCAGGACGGAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR GCA 90 bp | TTCTGGTCCAGTCTGGCCACTGGAAATCGGCCTTCTTCTAGGTTCTaGTCAACCCCAGAGGGACGGCCACAGAGGGACGGCGGCGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: FWSSLATGNRPSSRF*STPEGRPQRDGGGE Trigger: CTCTCCGCCGCCGTCCCTCTGTGGCCGTCCCTCTGGGGTTGAGCAGAACCTAGAAGAAGGCCGATTTCCAGTGGCCAGACTGGACCAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR GCA 90 bp | ACCCCAGAGGGACGGCCACAGAGGGACGGCGGCGGAGAGGCCTGGTaGCTCTCATCTAATCGATGTCGCCTCACTGTTGAAATTACAAGC | + |
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Preference number: 1 (lower is better) Translates to: TPEGRPQRDGGGEAW*LSSNRCRLTVEITS Trigger: GCTTGTAATTTCAACAGTGAGGCGACATCGATTAGATGAGAGGCACCAGGCCTCTCCGCCGCCGTCCCTCTGTGGCCGTCCCTCTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR GCA 90 bp | CTGGGAACACCCTGGGGACTCATCTCAGTGTCCAGTGAAAGAGGCTaGAGTCCTGATGCCAAGCGAGCGAGAGAGAGCTCCCAGCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: LGTPWGLISVSSERG*SPDAKRARESSQLC Trigger: ACAGAGCTGGGAGCTCTCTCTCGCTCGCTTGGCATCAGGACTGCAGCCTCTTTCACTGGACACTGAGATGAGTCCCCAGGGTGTTCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR GCA 90 bp | ACCAGGCATTCTGGGATAGCCCATGGGCAATCAGCTCTGCCTCTGTaGCCCCTACCCTCTGCTAGAATCCCTTCCTGGTCTCCTGATGCC | + |
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Preference number: 1 (lower is better) Translates to: TRHSGIAHGQSALPL*PLPSARIPSWSPDA Trigger: GGCATCAGGAGACCAGGAAGGGATTCTAGCAGAGGGTAGGGGGCACAGAGGCAGAGCTGATTGCCCATGGGCTATCCCAGAATGCCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR CCA 90 bp | CCGAGAAGGCTCTCTGCATCCGGTGGCATCAAGAGCCTTACATTCTaGAGGATGGAGGCCCCCTTTCAGGGAACCAGGTTTCCAGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: PRRLSASGGIKSLTF*RMEAPFQGTRFPAA Trigger: GGCAGCTGGAAACCTGGTTCCCTGAAAGGGGGCCTCCATCCTCCAGAATGTAAGGCTCTTGATGCCACCGGATGCAGAGAGCCTTCTCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR CCA 90 bp | ATGTCTTGCTGGCTGAGGGCAGGAGACATGGGCCGGGCCAGCAGGTaGTTTCATGTGTACAGGTGGCAACAGGTGATCAAGCCCAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: MSCWLRAGDMGRASR*FHVYRWQQVIKPRV Trigger: AACCCTGGGCTTGATCACCTGTTGCCACCTGTACACATGAAACCACCTGCTGGCCCGGCCCATGTCTCCTGCCCTCAGCCAGCAAGACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR CCA 90 bp | TCAACCCCAGAGGGACGGCCACAGAGGGACGGCGGCGGAGAGGCCTaGTGCCTCTCATCTAATCGATGTCGCCTCACTGTTGAAATTACA | + |
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Preference number: 1 (lower is better) Translates to: STPEGRPQRDGGGEA*CLSSNRCRLTVEIT Trigger: TGTAATTTCAACAGTGAGGCGACATCGATTAGATGAGAGGCACCAGGCCTCTCCGCCGCCGTCCCTCTGTGGCCGTCCCTCTGGGGTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR CCA 90 bp | AACAATACCAGCCTCTGGTGGAGCATGCTAATCCAGGCTCCGTCCTaGGCCACAGCCATCATCTGGCTGCGAAACCACCCTGCTCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: NNTSLWWSMLIQAPS*ATAIIWLRNHPALL Trigger: CAGGAGAGCAGGGTGGTTTCGCAGCCAGATGATGGCTGTGGCCCAGGACGGAGCCTGGATTAGCATGCTCCACCAGAGGCTGGTATTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR GCA 90 bp | TGTGGGCTGCCCAGGCCTGACACAGTGGGCAAGCCTCTGTCAGATTaGAGCCTAGGAATCCTGCACCTCCTGATGCTAGATTCAGGACCA | + |
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Preference number: 1 (lower is better) Translates to: CGLPRPDTVGKPLSD*SLGILHLLMLDSGP Trigger: TGGTCCTGAATCTAGCATCAGGAGGTGCAGGATTCCTAGGCTGCAATCTGACAGAGGCTTGCCCACTGTGTCAGGCCTGGGCAGCCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR GCA 90 bp | GACCTCTTCTCCTACCAATTGAGGAGAGTGACAGGTTCTGTGGGCTaGCCAGGCCTGACACAGTGGGCAAGCCTCTGTCAGATTGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: DLFSYQLRRVTGSVG*PGLTQWASLCQIAA Trigger: GGCTGCAATCTGACAGAGGCTTGCCCACTGTGTCAGGCCTGGGCAGCCCACAGAACCTGTCACTCTCCTCAATTGGTAGGAGAAGAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR CCA 90 bp | GGCTCTCTGCATCCGGTGGCATCAAGAGCCTTACATTCTGGAGGATaGAGGCCCCCTTTCAGGGAACCAGGTTTCCAGCTGCCAGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: GSLHPVASRALHSGG*RPPFREPGFQLPAR Trigger: TCTTGCTGGCAGCTGGAAACCTGGTTCCCTGAAAGGGGGCCTCCATCCTCCAGAATGTAAGGCTCTTGATGCCACCGGATGCAGAGAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR TCA 90 bp | AACCCCAGGGGTGCGGACTTGAAAGCTTGGTGCTCTCTGACTGTCTaGGCCTGCCTTCTGCCTCCTGTCACCTCAAGACCTCTTCTCCTA | + |
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Preference number: 1 (lower is better) Translates to: NPRGADLKAWCSLTV*ACLLPPVTSRPLLL Trigger: TAGGAGAAGAGGTCTTGAGGTGACAGGAGGCAGAAGGCAGGCTCAGACAGTCAGAGAGCACCAAGCTTTCAAGTCCGCACCCCTGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR TCA 90 bp | CTGGGTTCCCAAGGGGGCAATGTGGCTTTCCTCTTGTCCAGACCTTaGAGAGCCCAACAGTCTCCTCCTTTGAAACCTGGACAGAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: LGSQGGNVAFLLSRP*RAQQSPPLKPGQSW Trigger: CCAGCTCTGTCCAGGTTTCAAAGGAGGAGACTGTTGGGCTCTTCAAGGTCTGGACAAGAGGAAAGCCACATTGCCCCCTTGGGAACCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR GCA 90 bp | GTATCCAGAGCCAGGCCTCCAGGGAGCAAGGAATGTGGAGGAGGATaGATTTGGTCTTTGAAAGGGGTGCTTGCAGCTGTGAGAAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: VSRARPPGSKECGGG*IWSLKGVLAAVRSS Trigger: TGAACTTCTCACAGCTGCAAGCACCCCTTTCAAAGACCAAATGCATCCTCCTCCACATTCCTTGCTCCCTGGAGGCCTGGCTCTGGATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR GCA 90 bp | CAGCAGGGGGCTGCCCATGTCCGTACAGACAGAAGAGACATTAAATaGACAGGTATCTTGACACATTTCAACACGGCAGCCCACATACCC | + |
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Preference number: 1 (lower is better) Translates to: QQGAAHVRTDRRDIK*TGILTHFNTAAHIP Trigger: GGGTATGTGGGCTGCCGTGTTGAAATGTGTCAAGATACCTGTGCATTTAATGTCTCTTCTGTCTGTACGGACATGGGCAGCCCCCTGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR GCA 90 bp | TGCGTGGAGGAGAAATGGCTGAGCCAAACACTGAAGCAACAATGTTaGAGTCACTGGGAAGAAGGAATGTTCGTCAGCACAGGGTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: CVEEKWLSQTLKQQC*SHWEEGMFVSTGWP Trigger: AGGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGACTGCAACATTGTTGCTTCAGTGTTTGGCTCAGCCATTTCTCCTCCACGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR GCA 90 bp | CAAGGAATGTGGAGGAGGATGCATTTGGTCTTTGAAAGGGGTGCTTaGAGCTGTGAGAAGTTCAAAAGGAGAACCTGGGTTCCCAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: QGMWRRMHLVFERGA*SCEKFKRRTWVPKG Trigger: CCCCTTGGGAACCCAGGTTCTCCTTTTGAACTTCTCACAGCTGCAAGCACCCCTTTCAAAGACCAAATGCATCCTCCTCCACATTCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR CCA 90 bp | TTTGCTATTGACTCTATTTACAGGGATTGGGGTGGGGGCTGTTTCTaGTCCAGTCTGGCCACTGGAAATCGGCCTTCTTCTAGGTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: FAIDSIYRDWGGGCF*SSLATGNRPSSRFC Trigger: GCAGAACCTAGAAGAAGGCCGATTTCCAGTGGCCAGACTGGACCAGAAACAGCCCCCACCCCAATCCCTGTAAATAGAGTCAATAGCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR CCA 90 bp | GAGAAATGGCTGAGCCAAACACTGAAGCAACAATGTTGCAGTCACTaGGAAGAAGGAATGTTCGTCAGCACAGGGTGGCCTTTTCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: EKWLSQTLKQQCCSH*EEGMFVSTGWPFPS Trigger: GCTGGGAAAAGGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGACTGCAACATTGTTGCTTCAGTGTTTGGCTCAGCCATTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR GCA 90 bp | ACCCTCCATTTGGTCTTGGCTTGGTGCTTTTATAGAAGGCGAGGATaGTTGTGTACCCAAGAGAAGCATCCTGCAGGGAGAGACATTTCC | + |
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Preference number: 1 (lower is better) Translates to: TLHLVLAWCFYRRRG*LCTQEKHPAGRDIS Trigger: GGAAATGTCTCTCCCTGCAGGATGCTTCTCTTGGGTACACAAGCATCCTCGCCTTCTATAAAAGCACCAAGCCAAGACCAAATGGAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR CCA 90 bp | GTACCCAAGAGAAGCATCCTGCAGGGAGAGACATTTCCAAGATCCTaGGGAGAATTGGAGCCTCTTAAAGGAGTCTTCTTAGTTGGCTAC | + |
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Preference number: 1 (lower is better) Translates to: VPKRSILQGETFPRS*GELEPLKGVFLVGY Trigger: GTAGCCAACTAAGAAGACTCCTTTAAGAGGCTCCAATTCTCCCCAGGATCTTGGAAATGTCTCTCCCTGCAGGATGCTTCTCTTGGGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR TCA 90 bp | GGACGGCCACAGAGGGACGGCGGCGGAGAGGCCTGGTGCCTCTCATCTAATCGAATAAGGGGACTGAGGTaGGGAGACTCAGGGCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: GRPQRDGGGEAWCLSSNRIRGLR*GDSGLG Trigger: CCCAAGCCCTGAGTCTCCTCACCTCAGTCCCCTTAT...TCGATTAGATGAGAGGCACCAGGCCTCTCCGCCGCCGTCCCTCTGTGGCCGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR TCA 90 bp | GGACGGCCACAGAGGGACGGCGGCGGAGAGGCCTGGTGCCTCTCATCTAATCGATGCTCTCTGACTGTCTaGGCCTGCCTTCTGCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GRPQRDGGGEAWCLSSNRCSLTV*ACLLPP Trigger: AGGAGGCAGAAGGCAGGCTCAGACAGTCAGAGAGCA...TCGATTAGATGAGAGGCACCAGGCCTCTCCGCCGCCGTCCCTCTGTGGCCGTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR TCA 90 bp | TGGGGTGGAGCAGCAATTTTGTCTGGCCCGAGAAGGCTCTCTGCATCCGGTGGCTCCCAGCTCTGTGACTaGGGACACCCATGGGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: WGGAAILSGPRRLSASGGSQLCD*GHPWAP Trigger: TGGAGCCCATGGGTGTCCTCAGTCACAGAGCTGGGA...GCCACCGGATGCAGAGAGCCTTCTCGGGCCAGACAAAATTGCTGCTCCACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR TCA 90 bp | GGACGGCCACAGAGGGACGGCGGCGGAGAGGCCTGGTGCCTCTCATCTAATCGAGTGCTTGGTTCAAATTaGGCCTCAATCTCTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: GRPQRDGGGEAWCLSSNRVLGSN*ASISAL Trigger: CAGTGCAGAGATTGAGGCTCAATTTGAACCAAGCAC...TCGATTAGATGAGAGGCACCAGGCCTCTCCGCCGCCGTCCCTCTGTGGCCGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR GCA 90 bp | GGTGGCCTTTTCCCAGCAGGGGGCTGCCCATGTCCGTACAGACAGAAGAGACATATGGGCAATCAGCTCTaGCTCTGTGCCCCCTACCCT | + |
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Preference number: 2 (lower is better) Translates to: GGLFPAGGCPCPYRQKRHMGNQL*LCAPYP Trigger: AGGGTAGGGGGCACAGAGGCAGAGCTGATTGCCCAT...ATGTCTCTTCTGTCTGTACGGACATGGGCAGCCCCCTGCTGGGAAAAGGCCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR CCA 90 bp | CCACTGGAAATCGGCCTTCTTCTAGGTTCTGCTCAACCCCAGAGGGACGGCCACGCTAGAATCCCTTCCTaGTCTCCTGATGCCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: PLEIGLLLGSAQPQRDGHARIPS*SPDALQ Trigger: CTGCAGGGCATCAGGAGACCAGGAAGGGATTCTAGC...GTGGCCGTCCCTCTGGGGTTGAGCAGAACCTAGAAGAAGGCCGATTTCCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR CAA 90 bp | TCAGTTGGGGCTTTTAAGCCCATAGTTCCTCTCTCTAGGAATGTCTaGCTGGCTGAGGGCAGGAGACATGGGCCGGGCCAGCAGGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: SVGAFKPIVPLSRNV*LAEGRRHGPGQQVV Trigger: AACCACCTGCTGGCCCGGCCCATGTCTCCTGCCCTCAGCCAGCAAGACATTCCTAGAGAGAGGAACTATGGGCTTAAAAGCCCCAACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR GCA 90 bp | AGGTGGTTTCATGTGTACAGGTGGCAACAGGTGATCAAGCCCAGGGTTCCTGGAGCCGAACCCCAGGGGTaGGGACTTGAAAGCTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: RWFHVYRWQQVIKPRVPGAEPQG*GLESLV Trigger: CACCAAGCTTTCAAGTCCGCACCCCTGGGGTTCGGC...TCCAGGAACCCTGGGCTTGATCACCTGTTGCCACCTGTACACATGAAACCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR GCA 90 bp | ACTGGAAATCGGCCTTCTTCTAGGTTCTGCTCAACCCCAGAGGGACGGCCACAGCCGCCTGGTGCTCCATaGTACCAGAGAGTCAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: TGNRPSSRFCSTPEGRPQPPGAP*YQRVSL Trigger: CAAACTGACTCTCTGGTAGCATGGAGCACCAGGCGG...CTGTGGCCGTCCCTCTGGGGTTGAGCAGAACCTAGAAGAAGGCCGATTTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR GCA 90 bp | TCACTGGGAAGAAGGAATGTTCGTCAGCACAGGGTGGCCTTTTCCCAGCAGGGGCCTTCTTCTAGGTTCTaGTCAACCCCAGAGGGACGG | + |
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Preference number: 2 (lower is better) Translates to: SLGRRNVRQHRVAFSQQGPSSRF*STPEGR Trigger: CCGTCCCTCTGGGGTTGAGCAGAACCTAGAAGAAGG...CCCCTGCTGGGAAAAGGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGTTTCATGTGTACAGGTGGCAACAGGTGATCAAGCCCAGGGTTCCTGGAAGGAGACTCAGGGCTTaGGAAGGGTTGGCTGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RWFHVYRWQQVIKPRVPGRRLRA*EGLAGP Trigger: TGGCCCAGCCAACCCTTCCCAAGCCCTGAGTCTCCT...TCCAGGAACCCTGGGCTTGATCACCTGTTGCCACCTGTACACATGAAACCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR CCA 90 bp | TCAAGACCTCTTCTCCTACCAATTGAGGAGAGTGACAGGTTCTGTGGGCTGCCCACCTGCTTTCTCCCCTaGGAACACCCTGGGGACTCA | + |
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Preference number: 2 (lower is better) Translates to: SRPLLLPIEESDRFCGLPTCFLP*EHPGDS Trigger: TGAGTCCCCAGGGTGTTCCCAGGGGAGAAAGCAGGT...GGGCAGCCCACAGAACCTGTCACTCTCCTCAATTGGTAGGAGAAGAGGTCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCCTTTTCCCAGCAGGGGGCTGCCCATGTCCGTACAGACAGAAGAGACATTCCTGTGCTTGTTCCTaGTCCCCTAAAAGAAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: GGLFPAGGCPCPYRQKRHSCACS*SPKRRA Trigger: TGCCCTTCTTTTAGGGGACCAGGAACAAGCACAGGA...ATGTCTCTTCTGTCTGTACGGACATGGGCAGCCCCCTGCTGGGAAAAGGCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR TCA 90 bp | TCACTGGGAAGAAGGAATGTTCGTCAGCACAGGGTGGCCTTTTCCCAGCAGGGGCAGAAGCCTCCTGACTaGGCAGCCATCACTGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: SLGRRNVRQHRVAFSQQGQKPPD*AAITEK Trigger: TTTTTCAGTGATGGCTGCTCAGTCAGGAGGCTTCTG...CCCCTGCTGGGAAAAGGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR TCA 90 bp | ACTGGAAATCGGCCTTCTTCTAGGTTCTGCTCAACCCCAGAGGGACGGCCACAGGGGTGCTTGCAGCTGTaGGAAGTTCAAAAGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: TGNRPSSRFCSTPEGRPQGCLQL*EVQKEN Trigger: GTTCTCCTTTTGAACTTCTCACAGCTGCAAGCACCC...CTGTGGCCGTCCCTCTGGGGTTGAGCAGAACCTAGAAGAAGGCCGATTTCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGTTTCATGTGTACAGGTGGCAACAGGTGATCAAGCCCAGGGTTCCTGGACAGGACCAGGCATTCTaGGATAGCCCATGGGCAATC | + |
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Preference number: 2 (lower is better) Translates to: RWFHVYRWQQVIKPRVPGQDQAF*DSPWAI Trigger: GATTGCCCATGGGCTATCCCAGAATGCCTGGTCCTG...TCCAGGAACCCTGGGCTTGATCACCTGTTGCCACCTGTACACATGAAACCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR CCA 90 bp | CACACAATGAGATCCCTACAGATGGTCCCCGGCACTAGCACGACACAAACTGTGCCAGGCCTGACACAGTaGGCAAGCCTCTGTCAGATT | + |
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Preference number: 2 (lower is better) Translates to: HTMRSLQMVPGTSTTQTVPGLTQ*ASLCQI Trigger: AATCTGACAGAGGCTTGCCCACTGTGTCAGGCCTGG...CACAGTTTGTGTCGTGCTAGTGCCGGGGACCATCTGTAGGGATCTCATTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR GCA 90 bp | TCACTGGGAAGAAGGAATGTTCGTCAGCACAGGGTGGCCTTTTCCCAGCAGGGGCCAAGAGAAGCATCCTaGAGGGAGAGACATTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: SLGRRNVRQHRVAFSQQGPREAS*RERHFQ Trigger: TTGGAAATGTCTCTCCCTGCAGGATGCTTCTCTTGG...CCCCTGCTGGGAAAAGGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR CCA 90 bp | TCACTGGGAAGAAGGAATGTTCGTCAGCACAGGGTGGCCTTTTCCCAGCAGGGGCTAAGCATGGGTAGATaGCACACTGGTTTTCCGTCT | + |
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Preference number: 2 (lower is better) Translates to: SLGRRNVRQHRVAFSQQGLSMGR*HTGFPS Trigger: AGACGGAAAACCAGTGTGCCATCTACCCATGCTTAG...CCCCTGCTGGGAAAAGGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCTGGAACATCTTCTCTGGGGTGGAGCAGCAATTTTGTCTGGCCCGAGAATTCTGGGATAGCCCATaGGCAATCAGCTCTGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: EGWNIFSGVEQQFCLAREFWDSP*AISSAS Trigger: AGAGGCAGAGCTGATTGCCCATGGGCTATCCCAGAA...TTCTCGGGCCAGACAAAATTGCTGCTCCACCCCAGAGAAGATGTTCCAGCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR CAA 90 bp | TTGCGTGGAGGAGAAATGGCTGAGCCAAACACTGAAGCAACAATGTaGCAGTCACTGGGAAGAAGGAATGTTCGTCAGCACAGGGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: LRGGEMAEPNTEATM*QSLGRRNVRQHRVA Trigger: GGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGACTGCAACATTGTTGCTTCAGTGTTTGGCTCAGCCATTTCTCCTCCACGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR TCA 90 bp | TCACTGGGAAGAAGGAATGTTCGTCAGCACAGGGTGGCCTTTTCCCAGCAGGGGAATCCAAACACACAATaGGATCCCTACAGATGGTCC | + |
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Preference number: 2 (lower is better) Translates to: SLGRRNVRQHRVAFSQQGNPNTQ*DPYRWS Trigger: GGACCATCTGTAGGGATCTCATTGTGTGTTTGGATT...CCCCTGCTGGGAAAAGGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR GCA 90 bp | GGTGGCCTTTTCCCAGCAGGGGGCTGCCCATGTCCGTACAGACAGAAGAGACATTCTCTCCTACCCTCTTaGTTCCTAATTTCTGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: GGLFPAGGCPCPYRQKRHSLLPS*FLISVS Trigger: GGAAACAGAAATTAGGAAGCAAGAGGGTAGGAGAGA...ATGTCTCTTCTGTCTGTACGGACATGGGCAGCCCCCTGCTGGGAAAAGGCCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR CCA 90 bp | ACTGGAAATCGGCCTTCTTCTAGGTTCTGCTCAACCCCAGAGGGACGGCCACAGCATTTTATACCAAGATaGCAGCTTGGGGGAGCATTC | + |
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Preference number: 2 (lower is better) Translates to: TGNRPSSRFCSTPEGRPQHFIPR*QLGGAF Trigger: GAATGCTCCCCCAAGCTGCCATCTTGGTATAAAATG...CTGTGGCCGTCCCTCTGGGGTTGAGCAGAACCTAGAAGAAGGCCGATTTCCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| 3UTR-3UTR TCA 90 bp | ACTGGAAATCGGCCTTCTTCTAGGTTCTGCTCAACCCCAGAGGGACGGCCACAGCTGAGCAGCCATCACTaGAAAATATGCTACTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: TGNRPSSRFCSTPEGRPQLSSHH*KICYSE Trigger: TTCAGAGTAGCATATTTTTCAGTGATGGCTGCTCAG...CTGTGGCCGTCCCTCTGGGGTTGAGCAGAACCTAGAAGAAGGCCGATTTCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR-3UTR TCA 90 bp | GGTGGCCTTTTCCCAGCAGGGGGCTGCCCATGTCCGTACAGACAGAAGAGACATAGGCATGGCATGGAATaGGAAGTCATTTTGTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GGLFPAGGCPCPYRQKRHRHGME*EVILFS Trigger: AGAAAACAAAATGACTTCTCATTCCATGCCATGCCT...ATGTCTCTTCTGTCTGTACGGACATGGGCAGCCCCCTGCTGGGAAAAGGCCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR-3UTR CCA 90 bp | CACACAATGAGATCCCTACAGATGGTCCCCGGCACTAGCACGACACAAACTGTGGGAGGAGGATGCATTTaGTCTTTGAAAGGGGTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: HTMRSLQMVPGTSTTQTVGGGCI*SLKGVL Trigger: AAGCACCCCTTTCAAAGACCAAATGCATCCTCCTCC...CACAGTTTGTGTCGTGCTAGTGCCGGGGACCATCTGTAGGGATCTCATTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR-3UTR CCA 90 bp | TCACTGGGAAGAAGGAATGTTCGTCAGCACAGGGTGGCCTTTTCCCAGCAGGGGCATTTGGTCTTGGCTTaGTGCTTTTATAGAAGGCGA | + |
|
Preference number: 2 (lower is better) Translates to: SLGRRNVRQHRVAFSQQGHLVLA*CFYRRR Trigger: TCGCCTTCTATAAAAGCACCAAGCCAAGACCAAATG...CCCCTGCTGGGAAAAGGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR-3UTR TCA 90 bp | CCAAACACTGAAGCAACAATGTTGCAGTCACTGGGAAGAAGGAATGTTCGTCAGAAGCTTGGTGCTCTCTaGCTGTCTGAGCCTGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: PNTEATMLQSLGRRNVRQKLGAL*LSEPAF Trigger: GAAGGCAGGCTCAGACAGTCAGAGAGCACCAAGCTT...CTGACGAACATTCCTTCTTCCCAGTGACTGCAACATTGTTGCTTCAGTGTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR-3UTR TCA 90 bp | CACACAATGAGATCCCTACAGATGGTCCCCGGCACTAGCACGACACAAACTGTGCTGCCCAAACAAGGCTaGGTTTTACAGATCAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: HTMRSLQMVPGTSTTQTVLPKQG*VLQIKA Trigger: TGCTTTGATCTGTAAAACTCAGCCTTGTTTGGGCAG...CACAGTTTGTGTCGTGCTAGTGCCGGGGACCATCTGTAGGGATCTCATTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CAA 90 bp | AGAAGCATCCTGCAGGGAGAGACATTTCCAAGATCCTGGGGAGAATaGGAGCCTCTTAAAGGAGTCTTCTTAGTTGGCTACTGTGGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: RSILQGETFPRSWGE*EPLKGVFLVGYCGV Trigger: GACTCCACAGTAGCCAACTAAGAAGACTCCTTTAAGAGGCTCCAATTCTCCCCAGGATCTTGGAAATGTCTCTCCCTGCAGGATGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CAA 90 bp | CTCCATTTGGTCTTGGCTTGGTGCTTTTATAGAAGGCGAGGATGCTaGTGTACCCAAGAGAAGCATCCTGCAGGGAGAGACATTTCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LHLVLAWCFYRRRGC*CTQEKHPAGRDISK Trigger: CTTGGAAATGTCTCTCCCTGCAGGATGCTTCTCTTGGGTACACAAGCATCCTCGCCTTCTATAAAAGCACCAAGCCAAGACCAAATGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR-3UTR GCA 90 bp | CCAAACACTGAAGCAACAATGTTGCAGTCACTGGGAAGAAGGAATGTTCGTCAGTCTCTAGGAATGTCTTaGTGGCTGAGGGCAGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: PNTEATMLQSLGRRNVRQSLGMS*WLRAGD Trigger: GTCTCCTGCCCTCAGCCAGCAAGACATTCCTAGAGA...CTGACGAACATTCCTTCTTCCCAGTGACTGCAACATTGTTGCTTCAGTGTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR-3UTR GCA 90 bp | TCACTGGGAAGAAGGAATGTTCGTCAGCACAGGGTGGCCTTTTCCCAGCAGGGGATTCTACCATTTCCATaGAAAACAATACCAGCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SLGRRNVRQHRVAFSQQGILPFP*KTIPAS Trigger: AGAGGCTGGTATTGTTTTGCATGGAAATGGTAGAAT...CCCCTGCTGGGAAAAGGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR-3UTR GCA 90 bp | CCAAACACTGAAGCAACAATGTTGCAGTCACTGGGAAGAAGGAATGTTCGTCAGGGCCTTCCTCTAAGATaGCAAGAAGGCTGGAACATC | + |
|
Preference number: 2 (lower is better) Translates to: PNTEATMLQSLGRRNVRQGLPLR*QEGWNI Trigger: GATGTTCCAGCCTTCTTGGCATCTTAGAGGAAGGCC...CTGACGAACATTCCTTCTTCCCAGTGACTGCAACATTGTTGCTTCAGTGTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR-3UTR GCA 90 bp | CCAAACACTGAAGCAACAATGTTGCAGTCACTGGGAAGAAGGAATGTTCGTCAGTTTGAAAGGGGTGCTTaGAGCTGTGAGAAGTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: PNTEATMLQSLGRRNVRQFERGA*SCEKFK Trigger: TTTGAACTTCTCACAGCTGCAAGCACCCCTTTCAAA...CTGACGAACATTCCTTCTTCCCAGTGACTGCAACATTGTTGCTTCAGTGTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR-3UTR CAA 90 bp | GGACGGCCACAGAGGGACGGCGGCGGAGAGGCCTGGTGCCTCTCATCTAATCGATGGAATGTTGCTCCCTaGGCTGGGACTGGGCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GRPQRDGGGEAWCLSSNRWNVAP*AGTGPC Trigger: ACAGGGCCCAGTCCCAGCCAAGGGAGCAACATTCCA...TCGATTAGATGAGAGGCACCAGGCCTCTCCGCCGCCGTCCCTCTGTGGCCGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | GAGGGACGGCCACAGAGGGACGGCGGCGGAGAGGCCTaGTGCCTCTCATCTAATCGATGTCGCCTCACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: EGRPQRDGGGEA*CLSSNRCRLTV Trigger: AACAGTGAGGCGACATCGATTAGATGAGAGGCACCAGGCCTCTCCGCCGCCGTCCCTCTGTGGCCGTCCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR TCA 72 bp | GCCAAGCGAGCGAGAGAGAGCTCCCAGCTCTGTGACTaGGGACACCCATGGGCTCCACCTACACCCATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: AKRARESSQLCD*GHPWAPPTPIA Trigger: GGCTATGGGTGTAGGTGGAGCCCATGGGTGTCCTCAGTCACAGAGCTGGGAGCTCTCTCTCGCTCGCTTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | CTAATCCAGGCTCCGTCCTGGGCCACAGCCATCATCTaGCTGCGAAACCACCCTGCTCTCCTGTCTCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LIQAPSWATAII*LRNHPALLSPW Trigger: CCAGGGAGACAGGAGAGCAGGGTGGTTTCGCAGCCAGATGATGGCTGTGGCCCAGGACGGAGCCTGGATTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR GCA 72 bp | AGTCTGGCCACTGGAAATCGGCCTTCTTCTAGGTTCTaGTCAACCCCAGAGGGACGGCCACAGAGGGACGGC | + |
|
Preference number: 3 (lower is better) Translates to: SLATGNRPSSRF*STPEGRPQRDG Trigger: GCCGTCCCTCTGTGGCCGTCCCTCTGGGGTTGAGCAGAACCTAGAAGAAGGCCGATTTCCAGTGGCCAGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR TCA 72 bp | GACAGGACCGAGGCCACGATACAGAGAAGGTGGATGTaGGCTGGAGGTCACTGCAGGATGCCTAGGAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: DRTEATIQRRWM*AGGHCRMPRNP Trigger: GGGGTTCCTAGGCATCCTGCAGTGACCTCCAGCTCACATCCACCTTCTCTGTATCGTGGCCTCGGTCCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR GCA 72 bp | CAGCTGCCAGCAAGATGGTATGCCGAACCCCAGGGGTaGGGACTTGAAAGCTTGGTGCTCTCTGACTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QLPARWYAEPQG*GLESLVLSDCL Trigger: CAGACAGTCAGAGAGCACCAAGCTTTCAAGTCCGCACCCCTGGGGTTCGGCATACCATCTTGCTGGCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | AGTCACTGGGAAGAAGGAATGTTCGTCAGCACAGGGTaGCCTTTTCCCAGCAGGGGGCTGCCCATGTCCGTA | + |
|
Preference number: 3 (lower is better) Translates to: SHWEEGMFVSTG*PFPSRGLPMSV Trigger: TACGGACATGGGCAGCCCCCTGCTGGGAAAAGGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR TCA 72 bp | CAACAGTCTCCTCCTTTGAAACCTGGACAGAGCTGGTaGGCTCCATCCGCCTGGTGCTCCATGCTACCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QQSPPLKPGQSW*APSAWCSMLPE Trigger: CTCTGGTAGCATGGAGCACCAGGCGGATGGAGCTCACCAGCTCTGTCCAGGTTTCAAAGGAGGAGACTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR GCA 72 bp | CCTCTGCTAGAATCCCTTCCTGGTCTCCTGATGCCCTaGAGGGTGCATAGGGACAGTCCTAAAGTCCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PLLESLPGLLMP*RVHRDSPKVLW Trigger: CCAGAGGACTTTAGGACTGTCCCTATGCACCCTGCAGGGCATCAGGAGACCAGGAAGGGATTCTAGCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | GCAAGGGGCCACTCTGGGTCACTAAGCATGGGTAGATaGCACACTGGTTTTCCGTCTCCAGAGGGTTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ARGHSGSLSMGR*HTGFPSPEGFL Trigger: CAGGAAACCCTCTGGAGACGGAAAACCAGTGTGCCATCTACCCATGCTTAGTGACCCAGAGTGGCCCCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | CATCCGGTGGCATCAAGAGCCTTACATTCTGGAGGATaGAGGCCCCCTTTCAGGGAACCAGGTTTCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HPVASRALHSGG*RPPFREPGFQL Trigger: CAGCTGGAAACCTGGTTCCCTGAAAGGGGGCCTCCATCCTCCAGAATGTAAGGCTCTTGATGCCACCGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | CCCTCACGGGCAGATCATTATGATTGGTCCAAGCGTTaGAATGTTGCTCCCTTGGCTGGGACTGGGCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PSRADHYDWSKR*NVAPLAGTGPC Trigger: ACAGGGCCCAGTCCCAGCCAAGGGAGCAACATTCCAACGCTTGGACCAATCATAATGATCTGCCCGTGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | ACAGGGATTGGGGTGGGGGCTGTTTCTGGTCCAGTCTaGCCACTGGAAATCGGCCTTCTTCTAGGTTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: TGIGVGAVSGPV*PLEIGLLLGSA Trigger: AGCAGAACCTAGAAGAAGGCCGATTTCCAGTGGCCAGACTGGACCAGAAACAGCCCCCACCCCAATCCCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGTGGAGCAGCAATTTTGTCTGGCCCGAGAAGGCTCTCTGCATCCGGTGGCCTCTTCTCCTACCAATaGAGGAGAGTGACAGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: WGGAAILSGPRRLSASGGLFSYQ*RRVTGS Trigger: AGAACCTGTCACTCTCCTCAATTGGTAGGAGAAGAG...GCCACCGGATGCAGAGAGCCTTCTCGGGCCAGACAAAATTGCTGCTCCACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR TCA 72 bp | TGTCCAGACCTTGAAGAGCCCAACAGTCTCCTCCTTTaGAACCTGGACAGAGCTGGTGAGCTCCATCCGCCT | + |
|
Preference number: 3 (lower is better) Translates to: CPDLEEPNSLLL*NLDRAGELHPP Trigger: AGGCGGATGGAGCTCACCAGCTCTGTCCAGGTTTCAAAGGAGGAGACTGTTGGGCTCTTCAAGGTCTGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR GCA 72 bp | AGAGAAGGTGGATGTGAGCTGGAGGTCACTGCAGGATaGCTAGGAACCCCTCTGAAGAAAGAGGGGAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: REGGCELEVTAG*LGTPLKKEGKA Trigger: TGCCTTCCCCTCTTTCTTCAGAGGGGTTCCTAGGCATCCTGCAGTGACCTCCAGCTCACATCCACCTTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | CTCTCTGCATCCGGTGGCATCAAGAGCCTTACATTCTaGAGGATGGAGGCCCCCTTTCAGGGAACCAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LSASGGIKSLTF*RMEAPFQGTRF Trigger: AAACCTGGTTCCCTGAAAGGGGGCCTCCATCCTCCAGAATGTAAGGCTCTTGATGCCACCGGATGCAGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | GGAACATCTTCTCTGGGGTGGAGCAGCAATTTTGTCTaGCCCGAGAAGGCTCTCTGCATCCGGTGGCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: GTSSLGWSSNFV*PEKALCIRWHQ Trigger: TTGATGCCACCGGATGCAGAGAGCCTTCTCGGGCCAGACAAAATTGCTGCTCCACCCCAGAGAAGATGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | GACTCTATTTACAGGGATTGGGGTGGGGGCTGTTTCTaGTCCAGTCTGGCCACTGGAAATCGGCCTTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DSIYRDWGGGCF*SSLATGNRPSS Trigger: AGAAGAAGGCCGATTTCCAGTGGCCAGACTGGACCAGAAACAGCCCCCACCCCAATCCCTGTAAATAGAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGCCTTTTCCCAGCAGGGGGCTGCCCATGTCCGTACAGACAGAAGAGACATCTTAAGAAAGGTGCTTaGTCCTCTTTGCTGGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: GGLFPAGGCPCPYRQKRHLKKGA*SSLLGL Trigger: AAGTCCCAGCAAAGAGGACAAAGCACCTTTCTTAAG...ATGTCTCTTCTGTCTGTACGGACATGGGCAGCCCCCTGCTGGGAAAAGGCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR TCA 72 bp | AGGTGCTTGGTTCAAATTGAGCCTCAATCTCTGCACTaGGACAGGACCGAGGCCACGATACAGAGAAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RCLVQIEPQSLH*DRTEATIQRRW Trigger: CCACCTTCTCTGTATCGTGGCCTCGGTCCTGTCTCAGTGCAGAGATTGAGGCTCAATTTGAACCAAGCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | TCCTCTAAGATGCCAAGAAGGCTGGAACATCTTCTCTaGGGTGGAGCAGCAATTTTGTCTGGCCCGAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSKMPRRLEHLL*GGAAILSGPRR Trigger: CCTTCTCGGGCCAGACAAAATTGCTGCTCCACCCCAGAGAAGATGTTCCAGCCTTCTTGGCATCTTAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | TTCAAAAGGAGAACCTGGGTTCCCAAGGGGGCAATGTaGCTTTCCTCTTGTCCAGACCTTGAAGAGCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: FKRRTWVPKGAM*LSSCPDLEEPN Trigger: GTTGGGCTCTTCAAGGTCTGGACAAGAGGAAAGCCACATTGCCCCCTTGGGAACCCAGGTTCTCCTTTTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | GGTGCTTGCAGCTGTGAGAAGTTCAAAAGGAGAACCTaGGTTCCCAAGGGGGCAATGTGGCTTTCCTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GACSCEKFKRRT*VPKGAMWLSSC Trigger: ACAAGAGGAAAGCCACATTGCCCCCTTGGGAACCCAGGTTCTCCTTTTGAACTTCTCACAGCTGCAAGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | CACGGCAGCCCACATACCCTCCATTTGGTCTTGGCTTaGTGCTTTTATAGAAGGCGAGGATGCTTGTGTACC | + |
|
Preference number: 3 (lower is better) Translates to: HGSPHTLHLVLA*CFYRRRGCLCT Trigger: GGTACACAAGCATCCTCGCCTTCTATAAAAGCACCAAGCCAAGACCAAATGGAGGGTATGTGGGCTGCCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR-3UTR CAA 90 bp | CACACAATGAGATCCCTACAGATGGTCCCCGGCACTAGCACGACACAAACTGTGTGGAGGAGGATGCATTaGGTCTTTGAAAGGGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: HTMRSLQMVPGTSTTQTVWRRMH*VFERGA Trigger: AGCACCCCTTTCAAAGACCAAATGCATCCTCCTCCA...CACAGTTTGTGTCGTGCTAGTGCCGGGGACCATCTGTAGGGATCTCATTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR-3UTR CAA 90 bp | CCACTGGAAATCGGCCTTCTTCTAGGTTCTGCTCAACCCCAGAGGGACGGCCACTACCAGAGAGTCAGTTaGCCCTCAGTTATTATTAGA | + |
|
Preference number: 3 (lower is better) Translates to: PLEIGLLLGSAQPQRDGHYQRVS*PSVIIR Trigger: TCTAATAATAACTGAGGGCAAACTGACTCTCTGGTA...GTGGCCGTCCCTCTGGGGTTGAGCAGAACCTAGAAGAAGGCCGATTTCCAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR GCA 72 bp | TCTAAGAGAGGGCGGGGTACAAGGAAGACTCTGGAGTaGTTAAGAAAGGTGCTTTGTCCTCTTTGCTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SKRGRGTRKTLE*LRKVLCPLCWD Trigger: GTCCCAGCAAAGAGGACAAAGCACCTTTCTTAAGCACTCCAGAGTCTTCCTTGTACCCCGCCCTCTCTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR GCA 72 bp | AAGGCGAGGATGCTTGTGTACCCAAGAGAAGCATCCTaGAGGGAGAGACATTTCCAAGATCCTGGGGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KARMLVYPREAS*RERHFQDPGEN Trigger: ATTCTCCCCAGGATCTTGGAAATGTCTCTCCCTGCAGGATGCTTCTCTTGGGTACACAAGCATCCTCGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR GCA 72 bp | GGCAGCCCACATACCCTCCATTTGGTCTTGGCTTGGTaGTTTTATAGAAGGCGAGGATGCTTGTGTACCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GSPHTLHLVLAW*FYRRRGCLCTQ Trigger: TTGGGTACACAAGCATCCTCGCCTTCTATAAAAGCACCAAGCCAAGACCAAATGGAGGGTATGTGGGCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | CTGAGCCAAACACTGAAGCAACAATGTTGCAGTCACTaGGAAGAAGGAATGTTCGTCAGCACAGGGTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LSQTLKQQCCSH*EEGMFVSTGWP Trigger: AGGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGACTGCAACATTGTTGCTTCAGTGTTTGGCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR GCA 72 bp | TTGGTCTTGGCTTGGTGCTTTTATAGAAGGCGAGGATaGTTGTGTACCCAAGAGAAGCATCCTGCAGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LVLAWCFYRRRG*LCTQEKHPAGR Trigger: TCTCCCTGCAGGATGCTTCTCTTGGGTACACAAGCATCCTCGCCTTCTATAAAAGCACCAAGCCAAGACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | TTCAACACGGCAGCCCACATACCCTCCATTTGGTCTTaGCTTGGTGCTTTTATAGAAGGCGAGGATGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: FNTAAHIPSIWS*LGAFIEGEDAC Trigger: ACAAGCATCCTCGCCTTCTATAAAAGCACCAAGCCAAGACCAAATGGAGGGTATGTGGGCTGCCGTGTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR GCA 72 bp | TGGAGGAGGATGCATTTGGTCTTTGAAAGGGGTGCTTaGAGCTGTGAGAAGTTCAAAAGGAGAACCTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: WRRMHLVFERGA*SCEKFKRRTWV Trigger: AACCCAGGTTCTCCTTTTGAACTTCTCACAGCTGCAAGCACCCCTTTCAAAGACCAAATGCATCCTCCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR GCA 72 bp | GCTGCCCATGTCCGTACAGACAGAAGAGACATTAAATaGACAGGTATCTTGACACATTTCAACACGGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: AAHVRTDRRDIK*TGILTHFNTAA Trigger: GGCTGCCGTGTTGAAATGTGTCAAGATACCTGTGCATTTAATGTCTCTTCTGTCTGTACGGACATGGGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | ACGACTCAGAGGTCAAGGACTCCAGGGCCTTGTCTTTaGCACCATTTTCTTCTGATAACTAGGTGCTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TTQRSRTPGPCL*HHFLLITRCLV Trigger: AACCAAGCACCTAGTTATCAGAAGAAAATGGTGCCAAAGACAAGGCCCTGGAGTCCTTGACCTCTGAGTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | CTCATGCACACACACTCACTTTGCGTGGAGGAGAAATaGCTGAGCCAAACACTGAAGCAACAATGTTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LMHTHSLCVEEK*LSQTLKQQCCS Trigger: ACTGCAACATTGTTGCTTCAGTGTTTGGCTCAGCCATTTCTCCTCCACGCAAAGTGAGTGTGTGTGCATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR TCA 72 bp | CTGACTGAGCAGCCATCACTGAAAAATATGCTACTCTaGAAAGGACAGCGACATGGCCTTCCTCTAAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: LTEQPSLKNMLL*KGQRHGLPLRC Trigger: GCATCTTAGAGGAAGGCCATGTCGCTGTCCTTTTCAGAGTAGCATATTTTTCAGTGATGGCTGCTCAGTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR TCA 72 bp | GCACTGTGCTTTGTAAGGCGACAGAAGCCTCCTGACTaGGCAGCCATCACTGAAAAATATGCTACTCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ALCFVRRQKPPD*AAITEKYATLK Trigger: TTTCAGAGTAGCATATTTTTCAGTGATGGCTGCTCAGTCAGGAGGCTTCTGTCGCCTTACAAAGCACAGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR GCA 72 bp | GAGAAATGGCTGAGCCAAACACTGAAGCAACAATGTTaGAGTCACTGGGAAGAAGGAATGTTCGTCAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: EKWLSQTLKQQC*SHWEEGMFVST Trigger: TGTGCTGACGAACATTCCTTCTTCCCAGTGACTGCAACATTGTTGCTTCAGTGTTTGGCTCAGCCATTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | AGAAGCATCCTGCAGGGAGAGACATTTCCAAGATCCTaGGGAGAATTGGAGCCTCTTAAAGGAGTCTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: RSILQGETFPRS*GELEPLKGVFL Trigger: TAAGAAGACTCCTTTAAGAGGCTCCAATTCTCCCCAGGATCTTGGAAATGTCTCTCCCTGCAGGATGCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR TCA 72 bp | AAACAGCACAACATCACATTTTCAACTACCAGACAATaGGTTCAGAGGGGCCTCCACAGAAGAACCAGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: KQHNITFSTTRQ*VQRGLHRRTSS Trigger: GCTACTGGTTCTTCTGTGGAGGCCCCTCTGAACTCATTGTCTGGTAGTTGAAAATGTGATGTTGTGCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR GCA 72 bp | GAAGTCATTTTGTTTTCTCCCAAGCAGGTCTCTAGTTaGGGTTACCCTCACGGGCAGATCATTATGATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: EVILFSPKQVSS*GYPHGQIIMIG Trigger: ACCAATCATAATGATCTGCCCGTGAGGGTAACCGCAACTAGAGACCTGCTTGGGAGAAAACAAAATGACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CCA 72 bp | ACTGAAAAATATGCTACTCTGAAAAGGACAGCGACATaGCCTTCCTCTAAGATGCCAAGAAGGCTGGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: TEKYATLKRTAT*PSSKMPRRLEH Trigger: ATGTTCCAGCCTTCTTGGCATCTTAGAGGAAGGCCATGTCGCTGTCCTTTTCAGAGTAGCATATTTTTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGAGCTGGTGTCCGCTGCTaGAGCGGCCGCAGCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QGLGRVGWATGWGKLPQGAGVRC*SGRSQP Trigger: GGGCTGGCTGCGGCCGCTGCAGCAGCGGACACCAGC...TCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR GCA 90 bp | ACTCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGCTGGTGTCCGCTGCTaGAGCGGCCGCAGCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TQGLGRVGWATGWGKLPQAGVRC*SGRSQP Trigger: GGGCTGGCTGCGGCCGCTGCAGCAGCGGACACCAGC...CTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACCAGCTGCTCGGCTGTaGACGTGGTCCGACTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGLGRVGWATGWGKLPQGPAARL*TWSDCG Trigger: GCCGCAGTCGGACCACGTTCACAGCCGAGCAGCTGG...TCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR GCA 90 bp | ACTCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGCCAGGGGGAAGCCGGTaGGCGGGTAGTTCTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TQGLGRVGWATGWGKLPQPGGSR*AGSSAP Trigger: CGGGGCAGAACTACCCGCGCACCGGCTTCCCCCTGG...CTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGAGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACGACTGCGGCGCTGCTTaGGCTTCAGGGGGAGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RAWEGLAGPLDGASCPRDDCGAA*ASGGGR Trigger: CCGACCTCCCCCTGAAGCGCAAGCAGCGCCGCAGTC...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGAAGAGCTGGTGTCCGCTaGTGCAGCGGCCGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGLGRVGWATGWGKLPQGRAGVR*CSGRSQ Trigger: CTGGCTGCGGCCGCTGCAGCAGCGGACACCAGCTCT...TCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACGCGTGGGCATGCCGGTaGGTGGGAAACCTCCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RAWEGLAGPLDGASCPRDAWACR*VGNLPA Trigger: TGCCGGGAGGTTTCCCACCCACCGGCATGCCCACGC...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACCGGCAGCTGGTAGGGTaGCAGCGTGGGCATGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RAWEGLAGPLDGASCPRDRQLVG*QRGHAG Trigger: ACCGGCATGCCCACGCTGCCACCCTACCAGCTGCCG...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGCGGCAGCTGGTAGGGTaGCAGCGTGGGCATGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGLGKGWLGHWMGQVAPGRQLVG*QRGHAG Trigger: ACCGGCATGCCCACGCTGCCACCCTACCAGCTGCCG...CCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACGGGCACGCCGGTTACTaGACCAGACCTGGACGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RAWEGLAGPLDGASCPRDGHAGY*TRPGRV Trigger: CACGCGTCCAGGTCTGGTTCAGTAACCGGCGTGCCC...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGAGTGGCAGCGTGGGCATaGCGGTGGGTGGGAAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGLGRVGWATGWGKLPQGVAAWA*RWVGNL Trigger: GAGGTTTCCCACCCACCGGCATGCCCACGCTGCCAC...TCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGGGGCATGCCGGTGGGTaGGAAACCTCCCGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGLGKGWLGHWMGQVAPGGHAGG*ETSRQK Trigger: CTTCTGCCGGGAGGTTTCCCACCCACCGGCATGCCC...CCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGA 67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGCTCCGTAGGCAGAGCTaGTGTCCGCTGCTGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SGLGKGWLGHWMGQVAPGLRRQS*CPLLQR Trigger: CCGCTGCAGCAGCGGACACCAGCTCTGCCTACGGAG...CCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACCCCCACCAAGCTGATTaGCCCGGCCTTGGCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RAWEGLAGPLDGASCPRDPHQAD*PGLGQE Trigger: CTCTTGGCCAAGGCCGGGTCAATCAGCTTGGTGGGG...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR TCA 90 bp | ACTCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGTGCTTCGGTCGCAGTaGCCGTCCTTCAGCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TQGLGRVGWATGWGKLPQVLRSQ*PSFSSR Trigger: CCGGCTGCTGAAGGACGGTCACTGCGACCGAAGCAC...CTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR TCA 90 bp | ACTCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACGCGTGCCTCCGTaGGCTTGGTCCTCTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQGLGRVGWATGWGKLPQGRVPP*AWSSVP Trigger: TGGCACAGAGGACCAAGCTCACGGAGGCACGCGTCC...CTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGAACCCTGATGCATGGTTaGTGGCGGAAGGGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLGRVGWATGWGKLPQGTLMHG*WRKGLG Trigger: CCCCAGCCCCTTCCGCCATCAACCATGCATCAGGGT...TCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACGCAGCCAGCCCACCCTaGTGCATGGTTGATGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RAWEGLAGPLDGASCPRDAASPP*CMVDGG Trigger: TCCGCCATCAACCATGCATCAGGGTGGGCTGGCTGC...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACAGCTGTCTCCTGGCTTaGTGGAGTCGGCCCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RAWEGLAGPLDGASCPRDSCLLA*WSRPVG Trigger: GCCAACGGGCCGACTCCATCAAGCCAGGAGACAGCT...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGTGGAGCAGCAATTTTGTCTGGCCCGAGAAGGCTCTCTGCATCCGGTGGCCCAGGGGGAAGCCGGTaGGCGGGTAGTTCTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: WGGAAILSGPRRLSASGGPGGSR*AGSSAP Trigger: CGGGGCAGAACTACCCGCGCACCGGCTTCCCCCTGG...GCCACCGGATGCAGAGAGCCTTCTCGGGCCAGACAAAATTGCTGCTCCACCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGAAGTCGGCCCGTTGGCTaGAGCTGGCTGAGATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLGRVGWATGWGKLPQGSRPVG*SWLRWR Trigger: CCTCCATCTCAGCCAGCTGCAGCCAACGGGCCGACT...TCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGAGATGGCGGAAGGGGCTaGGGCCTGTGTACTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGLGRVGWATGWGKLPQGDGGRG*GLCTVL Trigger: CAGCACAGTACACAGGCCCCAGCCCCTTCCGCCATC...TCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGGATGGCGGAAGGGGCTaGGGCCTGTGTACTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGLGKGWLGHWMGQVAPGDGGRG*GLCTVL Trigger: CAGCACAGTACACAGGCCCCAGCCCCTTCCGCCATC...CCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGATGGAGAAGTCGGCCTaGGGCTGTGGAGGCACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGLGKGWLGHWMGQVAPGMEKSA*GCGGTA Trigger: TGCCGTGCCTCCACAGCCCCAGGCCGACTTCTCCAT...CCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACATGCAGCGGGGAGATaGAGAAGTCGGCCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGLGRVGWATGWGKLPQGHAAGR*RSRPGA Trigger: AGCCCCAGGCCGACTTCTCCATCTCCCCGCTGCATG...TCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGCCCGTTGGCTGCAGCTaGCTGAGATGGAGGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGLGKGWLGHWMGQVAPGPVGCS*LRWRKP Trigger: CGGCTTCCTCCATCTCAGCCAGCTGCAGCCAACGGG...CCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACGGGCAAGCTGTCTCCTaGCTTGATGGAGTCGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RAWEGLAGPLDGASCPRDGQAVS*LDGVGP Trigger: CGGGCCGACTCCATCAAGCCAGGAGACAGCTTGCCC...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGAAAGACCCCACCAAGCTaGTTGACCCGGCCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGLGRVGWATGWGKLPQGKTPPS*LTRPWP Trigger: TGGCCAAGGCCGGGTCAATCAGCTTGGTGGGGTCTT...TCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACTTGGCTGCAGCTGGCTaGGATGGAGGAAGCCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RAWEGLAGPLDGASCPRDLAAAG*DGGSRV Trigger: GACTCGGCTTCCTCCATCTCAGCCAGCTGCAGCCAA...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR TCA 90 bp | ACTCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGAGCTGTCTCCTGGCTTaGTGGAGTCGGCCCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TQGLGRVGWATGWGKLPQSCLLA*WSRPVG Trigger: GCCAACGGGCCGACTCCATCAAGCCAGGAGACAGCT...CTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGAGAGCTTGGTCCTCTGTaGCAGCTCCTCCCGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QGLGRVGWATGWGKLPQGELGPL*QLLPGV Trigger: TACACCCGGGAGGAGCTGGCACAGAGGACCAAGCTC...TCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACGAGTCCAGGCCTCCATaGAGCGGGGAGATGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RAWEGLAGPLDGASCPRDESRPP*SGEMEK Trigger: CTTCTCCATCTCCCCGCTGCATGGAGGCCTGGACTC...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR GCA 90 bp | ACTCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGAGTCGGCCCGTTGGCTaGAGCTGGCTGAGATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQGLGRVGWATGWGKLPQSRPVG*SWLRWR Trigger: CCTCCATCTCAGCCAGCTGCAGCCAACGGGCCGACT...CTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACAACCTGAGGGCACCGTaGTTCGGTCGCAGTGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: RAWEGLAGPLDGASCPRDNLRAP*FGRSDR Trigger: ACGGTCACTGCGACCGAAGCACGGTGCCCTCAGGTT...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGCTTGGCCAAGAGGGGTaGACACTTCCAGGGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGLGKGWLGHWMGQVAPGLGQEG*TLPGGS Trigger: GCTTCCCCCTGGAAGTGTCCACCCCTCTTGGCCAAG...CCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACTTGGCCAAGAGGGGTaGACACTTCCAGGGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGLGRVGWATGWGKLPQGLGQEG*TLPGGS Trigger: GCTTCCCCCTGGAAGTGTCCACCCCTCTTGGCCAAG...TCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACCTGACAGGGTTCATGTaGTTGGAGGGAGCCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RAWEGLAGPLDGASCPRDLTGFM*LEGAPG Trigger: CCCTGGGGCTCCCTCCAACCACATGAACCCTGTCAG...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACATGGAGTCGGCCCGTTaGCTGCAGCTGGCTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RAWEGLAGPLDGASCPRDMESAR*LQLAEM Trigger: CATCTCAGCCAGCTGCAGCCAACGGGCCGACTCCAT...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGCCTTTTCCCAGCAGGGGGCTGCCCATGTCCGTACAGACAGAAGAGACATGACTGCGGCGCTGCTTaGGCTTCAGGGGGAGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLFPAGGCPCPYRQKRHDCGAA*ASGGGR Trigger: CCGACCTCCCCCTGAAGCGCAAGCAGCGCCGCAGTC...ATGTCTCTTCTGTCTGTACGGACATGGGCAGCCCCCTGCTGGGAAAAGGCCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR GCA 90 bp | TGGGGTGGAGCAGCAATTTTGTCTGGCCCGAGAAGGCTCTCTGCATCCGGTGGCGTGGCAGCGTGGGCATaGCGGTGGGTGGGAAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: WGGAAILSGPRRLSASGGVAAWA*RWVGNL Trigger: GAGGTTTCCCACCCACCGGCATGCCCACGCTGCCAC...GCCACCGGATGCAGAGAGCCTTCTCGGGCCAGACAAAATTGCTGCTCCACCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CCA 90 bp | TGGGGTGGAGCAGCAATTTTGTCTGGCCCGAGAAGGCTCTCTGCATCCGGTGGCCTCCGTAGGCAGAGCTaGTGTCCGCTGCTGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WGGAAILSGPRRLSASGGLRRQS*CPLLQR Trigger: CCGCTGCAGCAGCGGACACCAGCTCTGCCTACGGAG...GCCACCGGATGCAGAGAGCCTTCTCGGGCCAGACAAAATTGCTGCTCCACCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGCAGGGTTCATGTGGTTaGAGGGAGCCCCAGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGLGKGWLGHWMGQVAPGQGSCG*REPQGS Trigger: TGAACCCTGGGGCTCCCTCCAACCACATGAACCCTG...CCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | ACTCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGCTGACAGGGTTCATGTaGTTGGAGGGAGCCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQGLGRVGWATGWGKLPQLTGFM*LEGAPG Trigger: CCCTGGGGCTCCCTCCAACCACATGAACCCTGTCAG...CTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGGGTGCTGTAGGTGGGTaGGCAGTAAGACTGGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: SGLGKGWLGHWMGQVAPGGAVGG*AVRLGR Trigger: ACGTCCCAGTCTTACTGCCCACCCACCTACAGCACC...CCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | GGACGGCCACAGAGGGACGGCGGCGGAGAGGCCTGGTGCCTCTCATCTAATCGACAGTGGTGCTGTAGGTaGGTGGGCAGTAAGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRPQRDGGGEAWCLSSNRQWCCR*VGSKTG Trigger: CCCAGTCTTACTGCCCACCCACCTACAGCACCACTG...TCGATTAGATGAGAGGCACCAGGCCTCTCCGCCGCCGTCCCTCTGTGGCCGTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGCAGTGGTGCTGTAGGTaGGTGGGCAGTAAGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGLGKGWLGHWMGQVAPGQWCCR*VGSKTG Trigger: CCCAGTCTTACTGCCCACCCACCTACAGCACCACTG...CCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGCCTTTTCCCAGCAGGGGGCTGCCCATGTCCGTACAGACAGAAGAGACATGGACGCGTGCCTCCGTaGGCTTGGTCCTCTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGLFPAGGCPCPYRQKRHGRVPP*AWSSVP Trigger: TGGCACAGAGGACCAAGCTCACGGAGGCACGCGTCC...ATGTCTCTTCTGTCTGTACGGACATGGGCAGCCCCCTGCTGGGAAAAGGCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR TCA 90 bp | GGTGGCCTTTTCCCAGCAGGGGGCTGCCCATGTCCGTACAGACAGAAGAGACATGGGCACGCCGGTTACTaGACCAGACCTGGACGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGLFPAGGCPCPYRQKRHGHAGY*TRPGRV Trigger: CACGCGTCCAGGTCTGGTTCAGTAACCGGCGTGCCC...ATGTCTCTTCTGTCTGTACGGACATGGGCAGCCCCCTGCTGGGAAAAGGCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR TCA 90 bp | TGGGGTGGAGCAGCAATTTTGTCTGGCCCGAGAAGGCTCTCTGCATCCGGTGGCGCAGCCAGCCCACCCTaGTGCATGGTTGATGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WGGAAILSGPRRLSASGGAASPP*CMVDGG Trigger: TCCGCCATCAACCATGCATCAGGGTGGGCTGGCTGC...GCCACCGGATGCAGAGAGCCTTCTCGGGCCAGACAAAATTGCTGCTCCACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR TCA 90 bp | ACTCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGAGCCCCAGGGTTCATaGAGCTGTCAGAGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQGLGRVGWATGWGKLPQEPQGS*SCQSSW Trigger: CCAGCTACTCTGACAGCTTCATGAACCCTGGGGCTC...CTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR TCA 90 bp | TCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGGAGACAGGCCATTGCTaGCAGGGTTCATGTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGLGKGWLGHWMGQVAPGETGHC*QGSCGW Trigger: CCAACCACATGAACCCTGTCAGCAATGGCCTGTCTC...CCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACAGGATGCTCATGACCTaGGGAGACAGGCCATTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAWEGLAGPLDGASCPRDRMLMT*GDRPLL Trigger: CAGCAATGGCCTGTCTCCTCAGGTCATGAGCATCCT...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
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| CDS-3UTR CCA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACTTGAAGGCGGCCAGCTaGTTAGCTCCTGCCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RAWEGLAGPLDGASCPRDLKAAS*LAPACL Trigger: TAAGCAGGCAGGAGCTAACCAGCTGGCCGCCTTCAA...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACAGTAAGACTGGGACGTaGGCAAGCTGTCTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAWEGLAGPLDGASCPRDSKTGT*ASCLLA Trigger: AGCCAGGAGACAGCTTGCCCACGTCCCAGTCTTACT...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR GCA 90 bp | ACTCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGCCTGTGTACTGTGCTaGCTCCATCTTGGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TQGLGRVGWATGWGKLPQACVLC*LHLGRW Trigger: CCATCTCCCAAGATGGAGGCAGCACAGTACACAGGC...CTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTGATGCCCTGCAGGGTGCATAGGGACAGTCCTAAAGTCCTCTGGATTCCTAGAGCTGGTGTCCGCTaGTGCAGCGGCCGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLMPCRVHRDSPKVLWIPRAGVR*CSGRSQ Trigger: CTGGCTGCGGCCGCTGCAGCAGCGGACACCAGCTCT...AGGAATCCAGAGGACTTTAGGACTGTCCCTATGCACCCTGCAGGGCATCAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR TCA 90 bp | TCAAGACCTCTTCTCCTACCAATTGAGGAGAGTGACAGGTTCTGTGGGCTGCCCCCAGCTGCTCGGCTGTaGACGTGGTCCGACTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRPLLLPIEESDRFCGLPPAARL*TWSDCG Trigger: GCCGCAGTCGGACCACGTTCACAGCCGAGCAGCTGG...GGGCAGCCCACAGAACCTGTCACTCTCCTCAATTGGTAGGAGAAGAGGTCTTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR TCA 90 bp | TCACTGGGAAGAAGGAATGTTCGTCAGCACAGGGTGGCCTTTTCCCAGCAGGGGACCCTGATGCATGGTTaGTGGCGGAAGGGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLGRRNVRQHRVAFSQQGTLMHG*WRKGLG Trigger: CCCCAGCCCCTTCCGCCATCAACCATGCATCAGGGT...CCCCTGCTGGGAAAAGGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR GCA 90 bp | AGGTGGTTTCATGTGTACAGGTGGCAACAGGTGATCAAGCCCAGGGTTCCTGGAGTCCGACTGCGGCGCTaGTTGCGCTTCAGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RWFHVYRWQQVIKPRVPGVRLRR*LRFRGR Trigger: CCTCCCCCTGAAGCGCAAGCAGCGCCGCAGTCGGAC...TCCAGGAACCCTGGGCTTGATCACCTGTTGCCACCTGTACACATGAAACCACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CCA 90 bp | GAAGGCTGGAACATCTTCTCTGGGGTGGAGCAGCAATTTTGTCTGGCCCGAGAAGCGTGGGCATGCCGGTaGGTGGGAAACCTCCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGWNIFSGVEQQFCLAREAWACR*VGNLPA Trigger: TGCCGGGAGGTTTCCCACCCACCGGCATGCCCACGC...TTCTCGGGCCAGACAAAATTGCTGCTCCACCCCAGAGAAGATGTTCCAGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CCA 90 bp | TGGGGTGGAGCAGCAATTTTGTCTGGCCCGAGAAGGCTCTCTGCATCCGGTGGCCAGGGTTCATGTGGTTaGAGGGAGCCCCAGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WGGAAILSGPRRLSASGGQGSCG*REPQGS Trigger: TGAACCCTGGGGCTCCCTCCAACCACATGAACCCTG...GCCACCGGATGCAGAGAGCCTTCTCGGGCCAGACAAAATTGCTGCTCCACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CCA 90 bp | TGGGGTGGAGCAGCAATTTTGTCTGGCCCGAGAAGGCTCTCTGCATCCGGTGGCGGTGCTGTAGGTGGGTaGGCAGTAAGACTGGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: WGGAAILSGPRRLSASGGGAVGG*AVRLGR Trigger: ACGTCCCAGTCTTACTGCCCACCCACCTACAGCACC...GCCACCGGATGCAGAGAGCCTTCTCGGGCCAGACAAAATTGCTGCTCCACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CAA 72 bp | TGGTATGCCGAACCCCAGGGGTGCGGACTTGAAAGCTaGGTGCTCTCTGACTGTCTGAGCCTGCCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: WYAEPQGCGLES*VLSDCLSLPSA Trigger: GGCAGAAGGCAGGCTCAGACAGTCAGAGAGCACCAAGCTTTCAAGTCCGCACCCCTGGGGTTCGGCATACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| CDS-3UTR TCA 90 bp | TCACTGGGAAGAAGGAATGTTCGTCAGCACAGGGTGGCCTTTTCCCAGCAGGGGAAGACCCCACCAAGCTaGTTGACCCGGCCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLGRRNVRQHRVAFSQQGKTPPS*LTRPWP Trigger: TGGCCAAGGCCGGGTCAATCAGCTTGGTGGGGTCTT...CCCCTGCTGGGAAAAGGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| CDS-3UTR TCA 90 bp | GAAGGCTGGAACATCTTCTCTGGGGTGGAGCAGCAATTTTGTCTGGCCCGAGAAGTGCTTCGGTCGCAGTaGCCGTCCTTCAGCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EGWNIFSGVEQQFCLAREVLRSQ*PSFSSR Trigger: CCGGCTGCTGAAGGACGGTCACTGCGACCGAAGCAC...TTCTCGGGCCAGACAAAATTGCTGCTCCACCCCAGAGAAGATGTTCCAGCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CCA 90 bp | CTCCTGATGCCCTGCAGGGTGCATAGGGACAGTCCTAAAGTCCTCTGGATTCCTCATGCAGCGGGGAGATaGAGAAGTCGGCCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLMPCRVHRDSPKVLWIPHAAGR*RSRPGA Trigger: AGCCCCAGGCCGACTTCTCCATCTCCCCGCTGCATG...AGGAATCCAGAGGACTTTAGGACTGTCCCTATGCACCCTGCAGGGCATCAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR TCA 90 bp | TCACTGGGAAGAAGGAATGTTCGTCAGCACAGGGTGGCCTTTTCCCAGCAGGGGGAGCCCCAGGGTTCATaGAGCTGTCAGAGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLGRRNVRQHRVAFSQQGEPQGS*SCQSSW Trigger: CCAGCTACTCTGACAGCTTCATGAACCCTGGGGCTC...CCCCTGCTGGGAAAAGGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR TCA 90 bp | CCACTGGAAATCGGCCTTCTTCTAGGTTCTGCTCAACCCCAGAGGGACGGCCACAGGATGCTCATGACCTaGGGAGACAGGCCATTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLEIGLLLGSAQPQRDGHRMLMT*GDRPLL Trigger: CAGCAATGGCCTGTCTCCTCAGGTCATGAGCATCCT...GTGGCCGTCCCTCTGGGGTTGAGCAGAACCTAGAAGAAGGCCGATTTCCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CCA 90 bp | TCAAGACCTCTTCTCCTACCAATTGAGGAGAGTGACAGGTTCTGTGGGCTGCCCCCCGTTGGCTGCAGCTaGCTGAGATGGAGGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SRPLLLPIEESDRFCGLPPVGCS*LRWRKP Trigger: CGGCTTCCTCCATCTCAGCCAGCTGCAGCCAACGGG...GGGCAGCCCACAGAACCTGTCACTCTCCTCAATTGGTAGGAGAAGAGGTCTTGA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CCA 90 bp | AGGTGGTTTCATGTGTACAGGTGGCAACAGGTGATCAAGCCCAGGGTTCCTGGAGGGCAAGCTGTCTCCTaGCTTGATGGAGTCGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RWFHVYRWQQVIKPRVPGGQAVS*LDGVGP Trigger: CGGGCCGACTCCATCAAGCCAGGAGACAGCTTGCCC...TCCAGGAACCCTGGGCTTGATCACCTGTTGCCACCTGTACACATGAAACCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CCA 90 bp | ACTCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGACAGGCTCACGTTTTTaGCCAGGTAATCAACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQGLGRVGWATGWGKLPQTGSRF*PGNQQQ Trigger: CTGCTGTTGATTACCTGGCCAAAAACGTGAGCCTGT...CTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| 3UTR CAA 72 bp | AGGCTGGAACATCTTCTCTGGGGTGGAGCAGCAATTTaGTCTGGCCCGAGAAGGCTCTCTGCATCCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLEHLLWGGAAI*SGPRRLSASGG Trigger: GCCACCGGATGCAGAGAGCCTTCTCGGGCCAGACAAAATTGCTGCTCCACCCCAGAGAAGATGTTCCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR TCA 90 bp | GTCACCTCAAGACCTCTTCTCCTACCAATTGAGGAGAGTGACAGGTTCTGTGGGCCCCACCAAGCTGATTaGCCCGGCCTTGGCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VTSRPLLLPIEESDRFCGPHQAD*PGLGQE Trigger: CTCTTGGCCAAGGCCGGGTCAATCAGCTTGGTGGGG...CCCACAGAACCTGTCACTCTCCTCAATTGGTAGGAGAAGAGGTCTTGAGGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR TCA 90 bp | AGGTGGTTTCATGTGTACAGGTGGCAACAGGTGATCAAGCCCAGGGTTCCTGGACCCGGATTTCCCAGCTaGACATCCCGGGGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RWFHVYRWQQVIKPRVPGPGFPS*TSRGSL Trigger: GAGAGAACCCCGGGATGTTCAGCTGGGAAATCCGGG...TCCAGGAACCCTGGGCTTGATCACCTGTTGCCACCTGTACACATGAAACCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR TCA 90 bp | ACTGGAAATCGGCCTTCTTCTAGGTTCTGCTCAACCCCAGAGGGACGGCCACAGGAGACAGGCCATTGCTaGCAGGGTTCATGTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGNRPSSRFCSTPEGRPQETGHC*QGSCGW Trigger: CCAACCACATGAACCCTGTCAGCAATGGCCTGTCTC...CTGTGGCCGTCCCTCTGGGGTTGAGCAGAACCTAGAAGAAGGCCGATTTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR GCA 90 bp | GAAGGCTGGAACATCTTCTCTGGGGTGGAGCAGCAATTTTGTCTGGCCCGAGAAGAGCTTGGTCCTCTGTaGCAGCTCCTCCCGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EGWNIFSGVEQQFCLAREELGPL*QLLPGV Trigger: TACACCCGGGAGGAGCTGGCACAGAGGACCAAGCTC...TTCTCGGGCCAGACAAAATTGCTGCTCCACCCCAGAGAAGATGTTCCAGCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CCA 90 bp | CTCCTGATGCCCTGCAGGGTGCATAGGGACAGTCCTAAAGTCCTCTGGATTCCTAGTAAGACTGGGACGTaGGCAAGCTGTCTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLMPCRVHRDSPKVLWIPSKTGT*ASCLLA Trigger: AGCCAGGAGACAGCTTGCCCACGTCCCAGTCTTACT...AGGAATCCAGAGGACTTTAGGACTGTCCCTATGCACCCTGCAGGGCATCAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR GCA 90 bp | TCAAGACCTCTTCTCCTACCAATTGAGGAGAGTGACAGGTTCTGTGGGCTGCCCGCCTGTGTACTGTGCTaGCTCCATCTTGGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SRPLLLPIEESDRFCGLPACVLC*LHLGRW Trigger: CCATCTCCCAAGATGGAGGCAGCACAGTACACAGGC...GGGCAGCCCACAGAACCTGTCACTCTCCTCAATTGGTAGGAGAAGAGGTCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CCA 90 bp | CCAAACACTGAAGCAACAATGTTGCAGTCACTGGGAAGAAGGAATGTTCGTCAGGGGCATGCCGGTGGGTaGGAAACCTCCCGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PNTEATMLQSLGRRNVRQGHAGG*ETSRQK Trigger: CTTCTGCCGGGAGGTTTCCCACCCACCGGCATGCCC...CTGACGAACATTCCTTCTTCCCAGTGACTGCAACATTGTTGCTTCAGTGTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CCA 90 bp | CCAAACACTGAAGCAACAATGTTGCAGTCACTGGGAAGAAGGAATGTTCGTCAGATGGAGAAGTCGGCCTaGGGCTGTGGAGGCACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PNTEATMLQSLGRRNVRQMEKSA*GCGGTA Trigger: TGCCGTGCCTCCACAGCCCCAGGCCGACTTCTCCAT...CTGACGAACATTCCTTCTTCCCAGTGACTGCAACATTGTTGCTTCAGTGTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CCA 90 bp | TCACTGGGAAGAAGGAATGTTCGTCAGCACAGGGTGGCCTTTTCCCAGCAGGGGACAGGCTCACGTTTTTaGCCAGGTAATCAACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLGRRNVRQHRVAFSQQGTGSRF*PGNQQQ Trigger: CTGCTGTTGATTACCTGGCCAAAAACGTGAGCCTGT...CCCCTGCTGGGAAAAGGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CCA 90 bp | CCAAACACTGAAGCAACAATGTTGCAGTCACTGGGAAGAAGGAATGTTCGTCAGATGGAGTCGGCCCGTTaGCTGCAGCTGGCTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PNTEATMLQSLGRRNVRQMESAR*LQLAEM Trigger: CATCTCAGCCAGCTGCAGCCAACGGGCCGACTCCAT...CTGACGAACATTCCTTCTTCCCAGTGACTGCAACATTGTTGCTTCAGTGTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CAA 72 bp | GACTCTGGAGTGCTTAAGAAAGGTGCTTTGTCCTCTTaGCTGGGACTTTTAGCATCTTCCTCTGTCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSGVLKKGALSS*LGLLASSSVPG Trigger: CCCGGGGACAGAGGAAGATGCTAAAAGTCCCAGCAAAGAGGACAAAGCACCTTTCTTAAGCACTCCAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CAA 72 bp | GTCTTGGCTTGGTGCTTTTATAGAAGGCGAGGATGCTaGTGTACCCAAGAGAAGCATCCTGCAGGGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLAWCFYRRRGC*CTQEKHPAGRD Trigger: GTCTCTCCCTGCAGGATGCTTCTCTTGGGTACACAAGCATCCTCGCCTTCTATAAAAGCACCAAGCCAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CAA 72 bp | TTTCAACACGGCAGCCCACATACCCTCCATTTGGTCTaGGCTTGGTGCTTTTATAGAAGGCGAGGATGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FQHGSPHTLHLV*AWCFYRRRGCL Trigger: CAAGCATCCTCGCCTTCTATAAAAGCACCAAGCCAAGACCAAATGGAGGGTATGTGGGCTGCCGTGTTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CAA 72 bp | CTGCAGGGAGAGACATTTCCAAGATCCTGGGGAGAATaGGAGCCTCTTAAAGGAGTCTTCTTAGTTGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LQGETFPRSWGE*EPLKGVFLVGY Trigger: GTAGCCAACTAAGAAGACTCCTTTAAGAGGCTCCAATTCTCCCCAGGATCTTGGAAATGTCTCTCCCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CAA 72 bp | GGAGAAATGGCTGAGCCAAACACTGAAGCAACAATGTaGCAGTCACTGGGAAGAAGGAATGTTCGTCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GEMAEPNTEATM*QSLGRRNVRQH Trigger: GTGCTGACGAACATTCCTTCTTCCCAGTGACTGCAACATTGTTGCTTCAGTGTTTGGCTCAGCCATTTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CAA 72 bp | CCTGGTGCCTCTCATCTAATCGATGTCGCCTCACTGTaGAAATTACAAGCTGCCCAAACAAGGCTGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PGASHLIDVASL*KLQAAQTRLSF Trigger: AAAACTCAGCCTTGTTTGGGCAGCTTGTAATTTCAACAGTGAGGCGACATCGATTAGATGAGAGGCACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| 3UTR CAA 72 bp | CAGATAATAGGTCTAGAGATGAGAAATCGGTGTACATaGGTCACATGTTCATGTAGACAAGTGTCCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QIIGLEMRNRCT*VTCSCRQVSLV Trigger: CACCAGGGACACTTGTCTACATGAACATGTGACCAATGTACACCGATTTCTCATCTCTAGACCTATTATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS TCA 90 bp | GCAGAGCTGGTGTCCGCTGCTGCAGCGGCCGCAGCCAGCCCACCCTaGTGCATGGTTGATGGCGGAAGGGGCTGGGGCCTGTGTACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: AELVSAAAAAAASPP*CMVDGGRGWGLCTV Trigger: CACAGTACACAGGCCCCAGCCCCTTCCGCCATCAACCATGCATCAGGGTGGGCTGGCTGCGGCCGCTGCAGCAGCGGACACCAGCTCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS CCA 90 bp | GGCAGCGTGGGCATGCCGGTGGGTGGGAAACCTCCCGGCAGAAGGTaGTTGAAGGCGGCCAGCTGGTTAGCTCCTGCCTGCTTACGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSVGMPVGGKPPGRR*LKAASWLAPACLRQ Trigger: CTGGCGTAAGCAGGCAGGAGCTAACCAGCTGGCCGCCTTCAACCACCTTCTGCCGGGAGGTTTCCCACCCACCGGCATGCCCACGCTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS CCA 90 bp | AGAGTCCGGCAGCTGGTAGGGTGGCAGCGTGGGCATGCCGGTGGGTaGGAAACCTCCCGGCAGAAGGTGGTTGAAGGCGGCCAGCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RVRQLVGWQRGHAGG*ETSRQKVVEGGQLV Trigger: AACCAGCTGGCCGCCTTCAACCACCTTCTGCCGGGAGGTTTCCCACCCACCGGCATGCCCACGCTGCCACCCTACCAGCTGCCGGACTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS CCA 90 bp | GGAGATGGTGGTGGTGGGGTAGGTAGAGTCCGGCAGCTGGTAGGGTaGCAGCGTGGGCATGCCGGTGGGTGGGAAACCTCCCGGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GDGGGGVGRVRQLVG*QRGHAGGWETSRQK Trigger: CTTCTGCCGGGAGGTTTCCCACCCACCGGCATGCCCACGCTGCCACCCTACCAGCTGCCGGACTCTACCTACCCCACCACCACCATCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGCGTGCCTCCGTGAGCTaGGTCCTCTGTGCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGLGKGWLGHWMGQVAPGRASVS*VLCASS Trigger: GGAGCTGGCACAGAGGACCAAGCTCACGGAGGCACG...CCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS CCA 90 bp | GTGGGTGGGAAACCTCCCGGCAGAAGGTGGTTGAAGGCGGCCAGCTaGTTAGCTCCTGCCTGCTTACGCCAGCGGGCACGCCGGTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: VGGKPPGRRWLKAAS*LAPACLRQRARRLL Trigger: CAGTAACCGGCGTGCCCGCTGGCGTAAGCAGGCAGGAGCTAACCAGCTGGCCGCCTTCAACCACCTTCTGCCGGGAGGTTTCCCACCCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACTGATTGACCCGGCCTaGGCCAAGAGGGGTGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: QGLGRVGWATGWGKLPQGLIDPA*AKRGGH Trigger: GTGTCCACCCCTCTTGGCCAAGGCCGGGTCAATCAG...TCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACCCGGCAGAAGGTGGTaGAAGGCGGCCAGCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: QGLGRVGWATGWGKLPQGPGRRW*KAASWL Trigger: TAACCAGCTGGCCGCCTTCAACCACCTTCTGCCGGG...TCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACACCCTGATGCATGGTaGATGGCGGAAGGGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QGLGRVGWATGWGKLPQGHPDAW*MAEGAG Trigger: CCCAGCCCCTTCCGCCATCAACCATGCATCAGGGTG...TCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS TCA 90 bp | GCTGTCTCCTGGCTTGATGGAGTCGGCCCGTTGGCTGCAGCTGGCTaGGATGGAGGAAGCCGAGTCCAGGCCTCCATGCAGCGGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: AVSWLDGVGPLAAAG*DGGSRVQASMQRGD Trigger: ATCTCCCCGCTGCATGGAGGCCTGGACTCGGCTTCCTCCATCTCAGCCAGCTGCAGCCAACGGGCCGACTCCATCAAGCCAGGAGACAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS CCA 90 bp | CAGGCCTCCATGCAGCGGGGAGATGGAGAAGTCGGCCTGGGGCTGTaGAGGCACGGCACTCGGGTTGCTAAGGATGCTCATGACCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QASMQRGDGEVGLGL*RHGTRVAKDAHDLR Trigger: CCTCAGGTCATGAGCATCCTTAGCAACCCGAGTGCCGTGCCTCCACAGCCCCAGGCCGACTTCTCCATCTCCCCGCTGCATGGAGGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGCAGGGGTCGACCGTaGATGAAGACCCCACCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TQGLGRVGWATGWGKLPQGRGRP*MKTPPS Trigger: GCTTGGTGGGGTCTTCATCAACGGTCGACCCCTGCC...CTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CAA 90 bp | GGACGGCCACAGAGGGACGGCGGCGGAGAGGCCTGGTGCCTCTCATCTAATCGATCCAGACGGTTCCCTTaGTCGCCCAGGATGCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: GRPQRDGGGEAWCLSSNRSRRFP*SPRMPS Trigger: CGATGGCATCCTGGGCGACAAAGGGAACCGTCTGGA...TCGATTAGATGAGAGGCACCAGGCCTCTCCGCCGCCGTCCCTCTGTGGCCGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CAA 90 bp | TCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGTCCAGACGGTTCCCTTaGTCGCCCAGGATGCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: SGLGKGWLGHWMGQVAPGSRRFP*SPRMPS Trigger: CGATGGCATCCTGGGCGACAAAGGGAACCGTCTGGA...CCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGCCCGGCAGAAGGTGGTaGAAGGCGGCCAGCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: TQGLGRVGWATGWGKLPQPGRRW*KAASWL Trigger: TAACCAGCTGGCCGCCTTCAACCACCTTCTGCCGGG...CTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGACACAGGGTTCATGTGGTaGGAGGGAGCCCCAGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RAWEGLAGPLDGASCPRDTGFMW*EGAPGF Trigger: GAACCCTGGGGCTCCCTCCAACCACATGAACCCTGT...GTCCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGAAGCTGTCTCCTGGCTaGATGGAGTCGGCCCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGLGKGWLGHWMGQVAPGKLSPG*MESARW Trigger: CCAACGGGCCGACTCCATCAAGCCAGGAGACAGCTT...CCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS TCA 90 bp | TGGGTGGGCAGTAAGACTGGGACGTGGGCAAGCTGTCTCCTGGCTTaGTGGAGTCGGCCCGTTGGCTGCAGCTGGCTGAGATGGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WVGSKTGTWASCLLA*WSRPVGCSWLRWRK Trigger: CTTCCTCCATCTCAGCCAGCTGCAGCCAACGGGCCGACTCCATCAAGCCAGGAGACAGCTTGCCCACGTCCCAGTCTTACTGCCCACCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS CCA 90 bp | GCCAGCCACAGGGTCCACACTGTAGCCAGTGGTGCTGTAGGTGGGTaGGCAGTAAGACTGGGACGTGGGCAAGCTGTCTCCTGGCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ASHRVHTVASGAVGG*AVRLGRGQAVSWLD Trigger: ATCAAGCCAGGAGACAGCTTGCCCACGTCCCAGTCTTACTGCCCACCCACCTACAGCACCACTGGCTACAGTGTGGACCCTGTGGCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGCCTTTTCCCAGCAGGGGGCTGCCCATGTCCGTACAGACAGAAGAGACATCTGATTGACCCGGCCTaGGCCAAGAGGGGTGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: GGLFPAGGCPCPYRQKRHLIDPA*AKRGGH Trigger: GTGTCCACCCCTCTTGGCCAAGGCCGGGTCAATCAG...ATGTCTCTTCTGTCTGTACGGACATGGGCAGCCCCCTGCTGGGAAAAGGCCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CAA 90 bp | GGTGGCCTTTTCCCAGCAGGGGGCTGCCCATGTCCGTACAGACAGAAGAGACATGGCAGGGGTCGACCGTaGATGAAGACCCCACCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGLFPAGGCPCPYRQKRHGRGRP*MKTPPS Trigger: GCTTGGTGGGGTCTTCATCAACGGTCGACCCCTGCC...ATGTCTCTTCTGTCTGTACGGACATGGGCAGCCCCCTGCTGGGAAAAGGCCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS-3UTR CAA 90 bp | TCACTGGGAAGAAGGAATGTTCGTCAGCACAGGGTGGCCTTTTCCCAGCAGGGGCGTGCCTCCGTGAGCTaGGTCCTCTGTGCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLGRRNVRQHRVAFSQQGRASVS*VLCASS Trigger: GGAGCTGGCACAGAGGACCAAGCTCACGGAGGCACG...CCCCTGCTGGGAAAAGGCCACCCTGTGCTGACGAACATTCCTTCTTCCCAGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS TCA 90 bp | GGCTGTGGAGGCACGGCACTCGGGTTGCTAAGGATGCTCATGACCTaGGGAGACAGGCCATTGCTGACAGGGTTCATGTGGTTGGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GCGGTALGLLRMLMT*GDRPLLTGFMWLEG Trigger: TCCCTCCAACCACATGAACCCTGTCAGCAATGGCCTGTCTCCTCAGGTCATGAGCATCCTTAGCAACCCGAGTGCCGTGCCTCCACAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGGCTTGGGAAGGGTTGGCTGGGCCACTGGATGGGGCAAGTTGCCCCAGGGTCTTTCTTCCCGAACTaGATTCTGAGCACTCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SGLGKGWLGHWMGQVAPGSFFPN*ILSTRL Trigger: TAGCCGAGTGCTCAGAATCAAGTTCGGGAAGAAAGA...CCCTGGGGCAACTTGCCCCATCCAGTGGCCCAGCCAACCCTTCCCAAGCCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGACCTCTTCTCCTACCAATTGAGGAGAGTGACAGGTTCTGTGGGCTGCCCCACCCTGATGCATGGTaGATGGCGGAAGGGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRPLLLPIEESDRFCGLPHPDAW*MAEGAG Trigger: CCCAGCCCCTTCCGCCATCAACCATGCATCAGGGTG...GGGCAGCCCACAGAACCTGTCACTCTCCTCAATTGGTAGGAGAAGAGGTCTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
||
| CDS CCA 90 bp | GTCCCAGCACAGCGGAGTGTTCCCCAAGCTTCATACGGCGCTGTGTaGACAGGCTCACGTTTTTGGCCAGGTAATCAACAGCAGTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPAQRSVPQASYGAV*TGSRFWPGNQQQFG Trigger: GCCAAACTGCTGTTGATTACCTGGCCAAAAACGTGAGCCTGTCCACACAGCGCCGTATGAAGCTTGGGGAACACTCCGCTGTGCTGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS CCA 90 bp | GTTCCCCAAGCTTCATACGGCGCTGTGTGGACAGGCTCACGTTTTTaGCCAGGTAATCAACAGCAGTTTGGCCATACTGGCTGTACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VPQASYGAVWTGSRF*PGNQQQFGHTGCTG Trigger: ACCAGTACAGCCAGTATGGCCAAACTGCTGTTGATTACCTGGCCAAAAACGTGAGCCTGTCCACACAGCGCCGTATGAAGCTTGGGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS TCA 72 bp | GTGTCCGCTGCTGCAGCGGCCGCAGCCAGCCCACCCTaGTGCATGGTTGATGGCGGAAGGGGCTGGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VSAAAAAAASPP*CMVDGGRGWGL Trigger: CAGGCCCCAGCCCCTTCCGCCATCAACCATGCATCAGGGTGGGCTGGCTGCGGCCGCTGCAGCAGCGGACAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS GCA 72 bp | GTGGCGGGCTCCGTAGGCAGAGCTGGTGTCCGCTGCTaGAGCGGCCGCAGCCAGCCCACCCTGATGCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: VAGSVGRAGVRC*SGRSQPTLMHG Trigger: ACCATGCATCAGGGTGGGCTGGCTGCGGCCGCTGCAGCAGCGGACACCAGCTCTGCCTACGGAGCCCGCCAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS GCA 72 bp | GCTGTGGCGGGCTCCGTAGGCAGAGCTGGTGTCCGCTaGTGCAGCGGCCGCAGCCAGCCCACCCTGATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: AVAGSVGRAGVR*CSGRSQPTLMH Trigger: ATGCATCAGGGTGGGCTGGCTGCGGCCGCTGCAGCAGCGGACACCAGCTCTGCCTACGGAGCCCGCCACAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS CCA 72 bp | CAGCTGGTAGGGTGGCAGCGTGGGCATGCCGGTGGGTaGGAAACCTCCCGGCAGAAGGTGGTTGAAGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: QLVGWQRGHAGG*ETSRQKVVEGG Trigger: GCCGCCTTCAACCACCTTCTGCCGGGAGGTTTCCCACCCACCGGCATGCCCACGCTGCCACCCTACCAGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS CCA 72 bp | GGTGGTGGGGTAGGTAGAGTCCGGCAGCTGGTAGGGTaGCAGCGTGGGCATGCCGGTGGGTGGGAAACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GGGVGRVRQLVG*QRGHAGGWETS Trigger: GGAGGTTTCCCACCCACCGGCATGCCCACGCTGCCACCCTACCAGCTGCCGGACTCTACCTACCCCACCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS CCA 72 bp | CTGCTGCAGCGGCCGCAGCCAGCCCACCCTGATGCATaGTTGATGGCGGAAGGGGCTGGGGCCTGTGTACTG | + |
|
Preference number: 6 (lower is better) Translates to: LLQRPQPAHPDA*LMAEGAGACVL Trigger: CAGTACACAGGCCCCAGCCCCTTCCGCCATCAACCATGCATCAGGGTGGGCTGGCTGCGGCCGCTGCAGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS CAA 90 bp | AGCGTGGGCATGCCGGTGGGTGGGAAACCTCCCGGCAGAAGGTGGTaGAAGGCGGCCAGCTGGTTAGCTCCTGCCTGCTTACGCCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SVGMPVGGKPPGRRW*KAASWLAPACLRQR Trigger: CCGCTGGCGTAAGCAGGCAGGAGCTAACCAGCTGGCCGCCTTCAACCACCTTCTGCCGGGAGGTTTCCCACCCACCGGCATGCCCACGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS CCA 72 bp | GGCATGCCGGTGGGTGGGAAACCTCCCGGCAGAAGGTaGTTGAAGGCGGCCAGCTGGTTAGCTCCTGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GMPVGGKPPGRR*LKAASWLAPAC Trigger: GCAGGCAGGAGCTAACCAGCTGGCCGCCTTCAACCACCTTCTGCCGGGAGGTTTCCCACCCACCGGCATGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS CCA 72 bp | AGGCCTCCATGCAGCGGGGAGATGGAGAAGTCGGCCTaGGGCTGTGGAGGCACGGCACTCGGGTTGCTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RPPCSGEMEKSA*GCGGTALGLLR Trigger: CCTTAGCAACCCGAGTGCCGTGCCTCCACAGCCCCAGGCCGACTTCTCCATCTCCCCGCTGCATGGAGGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS CCA 72 bp | AAACCTCCCGGCAGAAGGTGGTTGAAGGCGGCCAGCTaGTTAGCTCCTGCCTGCTTACGCCAGCGGGCACGC | + |
|
Preference number: 6 (lower is better) Translates to: KPPGRRWLKAAS*LAPACLRQRAR Trigger: GCGTGCCCGCTGGCGTAAGCAGGCAGGAGCTAACCAGCTGGCCGCCTTCAACCACCTTCTGCCGGGAGGTTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS GCA 72 bp | AGGTGGTTGAAGGCGGCCAGCTGGTTAGCTCCTGCCTaGTTACGCCAGCGGGCACGCCGGTTACTGAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: RWLKAASWLAPA*LRQRARRLLNQ Trigger: CTGGTTCAGTAACCGGCGTGCCCGCTGGCGTAAGCAGGCAGGAGCTAACCAGCTGGCCGCCTTCAACCACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS CCA 72 bp | TGGGCAGTAAGACTGGGACGTGGGCAAGCTGTCTCCTaGCTTGATGGAGTCGGCCCGTTGGCTGCAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: WAVRLGRGQAVS*LDGVGPLAAAG Trigger: GCCAGCTGCAGCCAACGGGCCGACTCCATCAAGCCAGGAGACAGCTTGCCCACGTCCCAGTCTTACTGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS GCA 72 bp | CAGAAGGTGGTTGAAGGCGGCCAGCTGGTTAGCTCCTaGCTGCTTACGCCAGCGGGCACGCCGGTTACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QKVVEGGQLVSS*LLTPAGTPVTE Trigger: TTCAGTAACCGGCGTGCCCGCTGGCGTAAGCAGGCAGGAGCTAACCAGCTGGCCGCCTTCAACCACCTTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
||
| CDS CCA 72 bp | ATGCAGCGGGGAGATGGAGAAGTCGGCCTGGGGCTGTaGAGGCACGGCACTCGGGTTGCTAAGGATGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: MQRGDGEVGLGL*RHGTRVAKDAH Trigger: ATGAGCATCCTTAGCAACCCGAGTGCCGTGCCTCCACAGCCCCAGGCCGACTTCTCCATCTCCCCGCTGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
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| CDS TCA 72 bp | AGTAAGACTGGGACGTGGGCAAGCTGTCTCCTGGCTTaGTGGAGTCGGCCCGTTGGCTGCAGCTGGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: SKTGTWASCLLA*WSRPVGCSWLR Trigger: TCTCAGCCAGCTGCAGCCAACGGGCCGACTCCATCAAGCCAGGAGACAGCTTGCCCACGTCCCAGTCTTACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
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| CDS CCA 72 bp | AGGGTCCACACTGTAGCCAGTGGTGCTGTAGGTGGGTaGGCAGTAAGACTGGGACGTGGGCAAGCTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RVHTVASGAVGG*AVRLGRGQAVS Trigger: GGAGACAGCTTGCCCACGTCCCAGTCTTACTGCCCACCCACCTACAGCACCACTGGCTACAGTGTGGACCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
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| CDS TCA 72 bp | CAGGGTTCATGTGGTTGGAGGGAGCCCCAGGGTTCATaGAGCTGTCAGAGTAGCTGGAGAAGCTGTGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: QGSCGWREPQGS*SCQSSWRSCGG Trigger: CCCGCCACAGCTTCTCCAGCTACTCTGACAGCTTCATGAACCCTGGGGCTCCCTCCAACCACATGAACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
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| CDS CCA 72 bp | GGATGGACCCAGTCTCCTGATATCGGCACAGAATCTTaGAGACACAACCATGGGAAACACGGAGCTGACGGG | + |
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Preference number: 6 (lower is better) Translates to: GWTQSPDIGTES*RHNHGKHGADG Trigger: CCCGTCAGCTCCGTGTTTCCCATGGTTGTGTCTCCAAGATTCTGTGCCGATATCAGGAGACTGGGTCCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
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| CDS CCA 72 bp | CAGCGGAGTGTTCCCCAAGCTTCATACGGCGCTGTGTaGACAGGCTCACGTTTTTGGCCAGGTAATCAACAG | + |
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Preference number: 6 (lower is better) Translates to: QRSVPQASYGAV*TGSRFWPGNQQ Trigger: CTGTTGATTACCTGGCCAAAAACGTGAGCCTGTCCACACAGCGCCGTATGAAGCTTGGGGAACACTCCGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
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| CDS CAA 90 bp | CTGTGTGGACAGGCTCACGTTTTTGGCCAGGTAATCAACAGCAGTTaGGCCATACTGGCTGTACTGGTAGCCAGCCACAGGGTCCACACT | + |
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Preference number: 6 (lower is better) Translates to: LCGQAHVFGQVINSS*AILAVLVASHRVHT Trigger: AGTGTGGACCCTGTGGCTGGCTACCAGTACAGCCAGTATGGCCAAACTGCTGTTGATTACCTGGCCAAAAACGTGAGCCTGTCCACACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
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| CDS CCA 72 bp | GCTTCATACGGCGCTGTGTGGACAGGCTCACGTTTTTaGCCAGGTAATCAACAGCAGTTTGGCCATACTGGC | + |
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Preference number: 6 (lower is better) Translates to: ASYGAVWTGSRF*PGNQQQFGHTG Trigger: GCCAGTATGGCCAAACTGCTGTTGATTACCTGGCCAAAAACGTGAGCCTGTCCACACAGCGCCGTATGAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
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| CDS CAA 72 bp | CAGGCTCACGTTTTTGGCCAGGTAATCAACAGCAGTTaGGCCATACTGGCTGTACTGGTAGCCAGCCACAGG | + |
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Preference number: 6 (lower is better) Translates to: QAHVFGQVINSS*AILAVLVASHR Trigger: CCTGTGGCTGGCTACCAGTACAGCCAGTATGGCCAAACTGCTGTTGATTACCTGGCCAAAAACGTGAGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
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| CDS GCA 72 bp | CCAGACGGTTCCCTTTGTCGCCCAGGATGCCATCGATaGTGTGTTTGGCTTTCTTCTCGCCATCTTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PDGSLCRPGCHR*CVWLSSRHLLL Trigger: AAGAAGAAGATGGCGAGAAGAAAGCCAAACACAGCATCGATGGCATCCTGGGCGACAAAGGGAACCGTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030508.14 ENSMUST00000174681.2 |
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| CDS CAA 90 bp | TCTTCTTTCTTGTCTCCTTCCTCGTCGTCCTCTTTCTTCCCGAACTaGATTCTGAGCACTCGGCTAATCGAACTCACTGAGGGCACCGTG | + |
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Preference number: 6 (lower is better) Translates to: SSFLSPSSSSSFFPN*ILSTRLIELTEGTV Trigger: CACGGTGCCCTCAGTGAGTTCGATTAGCCGAGTGCTCAGAATCAAGTTCGGGAAGAAAGAGGACGACGAGGAAGGAGACAAGAAAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030508.14 |
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| CDS CAA 90 bp | TCTTCTTTCTTGTCTCCTTCCTCGTCGTCCTCTTTCTTCCCGAACTaGATTCTGAGCACTCGGCTAATCGAACTCACTAAACCTGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: SSFLSPSSSSSFFPN*ILSTRLIELTKPEG Trigger: GCCCTCAGGTTTAGTGAGTTCGATTAGCCGAGTGCTCAGAATCAAGTTCGGGAAGAAAGAGGACGACGAGGAAGGAGACAAGAAAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174681.2 |
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