Pregenerated sensors for PAX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004872Ensembl transcript IDs: ENSMUST00000004994.16, ENSMUST00000087086.7
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCGGAAACAGGGCTCCAAGTGGACAGTTCACTTATGCAATATCTaGCTTGAGATAATGAAAGGCACCTGTAAGGAAACACACGCAGCT | + |
|
Preference number: 1 (lower is better) Translates to: GRKQGSKWTVHLCNI*LEIMKGTCKETHAA Trigger: AGCTGCGTGTGTTTCCTTACAGGTGCCTTTCATTATCTCAAGCCAGATATTGCATAAGTGAACTGTCCACTTGGAGCCCTGTTTCCGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR GCA 90 bp | GTCTGTGGAGGCCGGAAACAGGGCTCCAAGTGGACAGTTCACTTATaGAATATCTGGCTTGAGATAATGAAAGGCACCTGTAAGGAAACA | + |
|
Preference number: 1 (lower is better) Translates to: VCGGRKQGSKWTVHL*NIWLEIMKGTCKET Trigger: TGTTTCCTTACAGGTGCCTTTCATTATCTCAAGCCAGATATTGCATAAGTGAACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR CCA 90 bp | GATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTaGACAGTTCACTTATGCAATATCTGGCTTGAGATAATGAAAGGC | + |
|
Preference number: 1 (lower is better) Translates to: DSSCLVCGGRKQGSK*TVHLCNIWLEIMKG Trigger: GCCTTTCATTATCTCAAGCCAGATATTGCATAAGTGAACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR TCA 90 bp | GTTCTGATTTCATTTCTATCACCTTGGCCATTGCCAAAGCATCTGTaGGGTACACAGTATTGCACGCTGAGAAGCAGATATGTGATGGGT | + |
|
Preference number: 1 (lower is better) Translates to: VLISFLSPWPLPKHL*GTQYCTLRSRYVMG Trigger: ACCCATCACATATCTGCTTCTCAGCGTGCAATACTGTGTACCTCACAGATGCTTTGGCAATGGCCAAGGTGATAGAAATGAAATCAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR CCA 90 bp | GACGAATGTAAACACCATCTCTGTAGAGAGCTTGATTCTCAGACATaGTCTCTGAACAAAAGGAACAAGCAGGATGTGAGTTGTTTGGCA | + |
|
Preference number: 1 (lower is better) Translates to: DECKHHLCRELDSQT*SLNKRNKQDVSCLA Trigger: TGCCAAACAACTCACATCCTGCTTGTTCCTTTTGTTCAGAGACCATGTCTGAGAATCAAGCTCTCTACAGAGATGGTGTTTACATTCGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR CCA 90 bp | TTAGACATCAAACCTGTTAACTTTCAGGAATTCAACTACAATATATaGGAACATTCTGCTTACTCAAACCACCCCGTGAAAATCAATCTC | + |
|
Preference number: 1 (lower is better) Translates to: LDIKPVNFQEFNYNI*EHSAYSNHPVKINL Trigger: GAGATTGATTTTCACGGGGTGGTTTGAGTAAGCAGAATGTTCCCATATATTGTAGTTGAATTCCTGAAAGTTAACAGGTTTGATGTCTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR CAA 90 bp | TCTATCACCTTGGCCATTGCCAAAGCATCTGTGAGGTACACAGTATaGCACGCTGAGAAGCAGATATGTGATGGGTGTCACTTCCTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: SITLAIAKASVRYTV*HAEKQICDGCHFLY Trigger: GTAGAGGAAGTGACACCCATCACATATCTGCTTCTCAGCGTGCAATACTGTGTACCTCACAGATGCTTTGGCAATGGCCAAGGTGATAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR TCA 90 bp | GCTCTGGGTCTTCCTTGTCTCCCCTGCCTTTTGTCCAATATGTTCAAAGAATCTTTCCTGAGACAAGTTTaGCACAACTCTGTGTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ALGLPCLPCLLSNMFKESFLRQV*HNSVSW Trigger: CCAGGACACAGAGTTGTGTCAAACTTGTCTCAGGAA...AGATTCTTTGAACATATTGGACAAAAGGCAGGGGAGACAAGGAAGACCCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR-3UTR CCA 90 bp | GCTCTGGGTCTTCCTTGTCTCCCCTGCCTTTTGTCCAATATGTTCAAAGAATCTTGCATTTTAGAGCTCTaGGTCTTCCTTGTCTCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: ALGLPCLPCLLSNMFKESCILEL*VFLVSP Trigger: AGGGGAGACAAGGAAGACCCAGAGCTCTAAAATGCA...AGATTCTTTGAACATATTGGACAAAAGGCAGGGGAGACAAGGAAGACCCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTTTTTAGGTCATGCTGGGACAATTCACAGTTAGGGGCAAGATCAGCTACATGCATTTTAGAGCTCTaGGTCTTCCTTGTCTCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: QLFRSCWDNSQLGARSATCILEL*VFLVSP Trigger: AGGGGAGACAAGGAAGACCCAGAGCTCTAAAATGCA...TGTAGCTGATCTTGCCCCTAACTGTGAATTGTCCCAGCATGACCTAAAAAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR-3UTR TCA 90 bp | CAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTACGGATTTGGGGCCATTTTaGTATGTAGCCAGTTACATC | + |
|
Preference number: 2 (lower is better) Translates to: QAGCELFGNEQTSLHSTTDLGPF*YVASYI Trigger: GATGTAACTGGCTACATATCAAAATGGCCCCAAATC...CGTAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR TCA 90 bp | AAAGTACATGAGAGCCACGTGGACATTTCTGTTCTAGCCCTGCCTTTTGTAGAACTCAGACATGGTCTCTaGACAAAAGGAACAAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: KVHESHVDISVLALPFVELRHGL*TKGTSR Trigger: CCTGCTTGTTCCTTTTGTTCAGAGACCATGTCTGAG...TTCTACAAAAGGCAGGGCTAGAACAGAAATGTCCACGTGGCTCTCATGTACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR TCA 90 bp | AACAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTACTGTGTTTTACCTACTaGCAATCCGGTTTTCCGTCC | + |
|
Preference number: 2 (lower is better) Translates to: NKQDVSCLATSKHHCTLLLCFTY*QSGFPS Trigger: GGACGGAAAACCGGATTGTCAGTAGGTAAAACACAG...TAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTTGATTCTCAGACATGGTCTCTGAACAAAAGGAACAAGCAGGATGTGAGTCACAACTCTGTGTCCTaGGCTTATCCCCATATGATC | + |
|
Preference number: 2 (lower is better) Translates to: ELDSQTWSLNKRNKQDVSHNSVS*AYPHMI Trigger: GATCATATGGGGATAAGCCCAGGACACAGAGTTGTG...ACTCACATCCTGCTTGTTCCTTTTGTTCAGAGACCATGTCTGAGAATCAAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR CAA 90 bp | TTCTCAGACATGGTCTCTGAACAAAAGGAACAAGCAGGATGTGAGTaGTTTGGCAACGAGCAAACATCACTGCACTCTACTACGATGAGT | + |
|
Preference number: 2 (lower is better) Translates to: FSDMVSEQKEQAGCE*FGNEQTSLHSTTMS Trigger: ACTCATCGTAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTGTTCCTTTTGTTCAGAGACCATGTCTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR TCA 90 bp | AACAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTAACTCAAACCACCCCGTaGAAATCAATCTCTCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: NKQDVSCLATSKHHCTLLTQTTP*KSISLS Trigger: AGAGAGAGAGATTGATTTTCACGGGGTGGTTTGAGT...TAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR GCA 90 bp | AAAGTACATGAGAGCCACGTGGACATTTCTGTTCTAGCCCTGCCTTTTGTAGAATATCACCTTGGCCATTaGCAAAGCATCTGTGAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: KVHESHVDISVLALPFVEYHLGH*QSICEV Trigger: TACCTCACAGATGCTTTGGCAATGGCCAAGGTGATA...TTCTACAAAAGGCAGGGCTAGAACAGAAATGTCCACGTGGCTCTCATGTACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR CAA 90 bp | ATGGTGCATTTTAGAGCTCTGGGTCTTCCTTGTCTCCCCTGCCTTTaGTCCAATATGTTCAAAGAATCTGAAAGCAACTACTGGAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: MVHFRALGLPCLPCL*SNMFKESESNYWRK Trigger: CTTTCTCCAGTAGTTGCTTTCAGATTCTTTGAACATATTGGACAAAAGGCAGGGGAGACAAGGAAGACCCAGAGCTCTAAAATGCACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR TCA 90 bp | AAAGTACATGAGAGCCACGTGGACATTTCTGTTCTAGCCCTGCCTTTTGTAGAACACATCATTGTTGGTTaGGGCTGCAACACAAAGATA | + |
|
Preference number: 2 (lower is better) Translates to: KVHESHVDISVLALPFVEHIIVG*GCNTKI Trigger: TATCTTTGTGTTGCAGCCTCAACCAACAATGATGTG...TTCTACAAAAGGCAGGGCTAGAACAGAAATGTCCACGTGGCTCTCATGTACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR TCA 90 bp | TGGTCTCTGAACAAAAGGAACAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAAATGCAATATCTGGCTTaGGATAATGAAAGGCACCTG | + |
|
Preference number: 2 (lower is better) Translates to: WSLNKRNKQDVSCLATSKMQYLA*DNERHL Trigger: CAGGTGCCTTTCATTATCTCAAGCCAGATATTGCAT...TTTGCTCGTTGCCAAACAACTCACATCCTGCTTGTTCCTTTTGTTCAGAGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR-3UTR CCA 90 bp | AACAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTATCATTTCTATCACCTTaGCCATTGCCAAAGCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: NKQDVSCLATSKHHCTLLSFLSP*PLPKHL Trigger: CAGATGCTTTGGCAATGGCCAAGGTGATAGAAATGA...TAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR TCA 90 bp | GACATTTTTACAACACATCATTGTTGGTTGAGGCTGCAACACAAAGATACTATGTTCTCAAGCAAGAGGTaGTCTCTCTCCCTTCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: DIFTTHHCWLRLQHKDTMFSSKR*SLSLPG Trigger: TCCTGGAAGGGAGAGAGATCACCTCTTGCTTGAGAA...CATAGTATCTTTGTGTTGCAGCCTCAACCAACAATGATGTGTTGTAAAAATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR-3UTR CCA 90 bp | CAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTACGCAAATCAATGTGACTTaGGAAGTAAATGACATCCAT | + |
|
Preference number: 2 (lower is better) Translates to: QAGCELFGNEQTSLHSTTQINVT*EVNDIH Trigger: ATGGATGTCATTTACTTCCCAAGTCACATTGATTTG...CGTAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR TCA 90 bp | ATCGGTTTCCAGTGTGTCAAAATCAAGGATTTCTCCATTCCCAATTCACTACATACTCAAACCACCCCGTaGAAATCAATCTCTCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: IGFQCVKIKDFSIPNSLHTQTTP*KSISLS Trigger: AGAGAGAGAGATTGATTTTCACGGGGTGGTTTGAGT...ATGTAGTGAATTGGGAATGGAGAAATCCTTGATTTTGACACACTGGAAACCGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR CAA 90 bp | ACAATCCGGTTTTCCGTCCCAGCAATTAATAACTGCAAGATGTTATaGACATCAGTTAAGCAAATAATTACACAAGGGAGCCTGTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TIRFSVPAINNCKML*TSVKQIITQGSLCC Trigger: ACAGCACAGGCTCCCTTGTGTAATTATTTGCTTAACTGATGTCAATAACATCTTGCAGTTATTAATTGCTGGGACGGAAAACCGGATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTACATGAGAGCCACGTGGACATTTCTGTTCTAGCCCTGCCTTTTGTAGAAATGGTAATAATTTACTaGGGAGATCCTTCACATCTA | + |
|
Preference number: 2 (lower is better) Translates to: KVHESHVDISVLALPFVEMVIIY*GDPSHL Trigger: TAGATGTGAAGGATCTCCCCAGTAAATTATTACCAT...TTCTACAAAAGGCAGGGCTAGAACAGAAATGTCCACGTGGCTCTCATGTACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTTGATTCTCAGACATGGTCTCTGAACAAAAGGAACAAGCAGGATGTGAGTCAAATCAATGTGACTTaGGAAGTAAATGACATCCAT | + |
|
Preference number: 2 (lower is better) Translates to: ELDSQTWSLNKRNKQDVSQINVT*EVNDIH Trigger: ATGGATGTCATTTACTTCCCAAGTCACATTGATTTG...ACTCACATCCTGCTTGTTCCTTTTGTTCAGAGACCATGTCTGAGAATCAAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR CCA 90 bp | CTATACAATGGTGGTGTTGGTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGAAACAGGGCTCCAAGTaGACAGTTCACTTATGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: LYNGGVGFHIGFQCVKIKKQGSK*TVHLCN Trigger: ATTGCATAAGTGAACTGTCCACTTGGAGCCCTGTTT...CTTGATTTTGACACACTGGAAACCGATATGAAAACCAACACCACCATTGTATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR CAA 90 bp | ACCTCATTAAGAACATGTGTTTCTAATGCTAGAGGTTATTTCATTTaGGCCAACCTCTGTGTTTTACCTACTGACAATCCGGTTTTCCGT | + |
|
Preference number: 2 (lower is better) Translates to: TSLRTCVSNARGYFI*ANLCVLPTDNPVFR Trigger: ACGGAAAACCGGATTGTCAGTAGGTAAAACACAGAGGTTGGCCAAAATGAAATAACCTCTAGCATTAGAAACACATGTTCTTAATGAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR-3UTR CCA 90 bp | CACTACCTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCATTCTCATTTCTATCACCTTaGCCATTGCCAAAGCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: HYLIVLKSKGNVFVPTSFSFLSP*PLPKHL Trigger: CAGATGCTTTGGCAATGGCCAAGGTGATAGAAATGA...GAATGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAGGTAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR CCA 90 bp | CTATACAATGGTGGTGTTGGTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGCTTGATTCTCAGACATaGTCTCTGAACAAAAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LYNGGVGFHIGFQCVKIKLDSQT*SLNKRN Trigger: GTTCCTTTTGTTCAGAGACCATGTCTGAGAATCAAG...CTTGATTTTGACACACTGGAAACCGATATGAAAACCAACACCACCATTGTATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR GCA 90 bp | CTATACAATGGTGGTGTTGGTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGTGGACAGTTCACTTATaGAATATCTGGCTTGAGATA | + |
|
Preference number: 2 (lower is better) Translates to: LYNGGVGFHIGFQCVKIKWTVHL*NIWLEI Trigger: TATCTCAAGCCAGATATTGCATAAGTGAACTGTCCA...CTTGATTTTGACACACTGGAAACCGATATGAAAACCAACACCACCATTGTATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR-3UTR CCA 90 bp | GACATTTTTACAACACATCATTGTTGGTTGAGGCTGCAACACAAAGATACTATGCTTGATTCTCAGACATaGTCTCTGAACAAAAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: DIFTTHHCWLRLQHKDTMLDSQT*SLNKRN Trigger: GTTCCTTTTGTTCAGAGACCATGTCTGAGAATCAAG...CATAGTATCTTTGTGTTGCAGCCTCAACCAACAATGATGTGTTGTAAAAATGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR TCA 90 bp | CATTTTTACAACACATCATTGTTGGTTGAGGCTGCAACACAAAGATACTATGTCCTAAATGTCACCACATaGATGTATGTAAACCTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: HFYNTSLLVEAATQRYYVLNVTT*MYVNLF Trigger: GAACAGGTTTACATACATTCATGTGGTGACATTTAG...GACATAGTATCTTTGTGTTGCAGCCTCAACCAACAATGATGTGTTGTAAAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR CAA 90 bp | GATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTGGACAGTTATTCCTGAGACAAGTTaGACACAACTCTGTGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: DSSCLVCGGRKQGSKWTVIPETS*TQLCVL Trigger: CAGGACACAGAGTTGTGTCAAACTTGTCTCAGGAAT...AACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR GCA 72 bp | GCACCTGTAAGGAAACACACGCAGCTTTTTAGGTCATaGTGGGACAATTCACAGTTAGGGGCAAGATCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: APVRKHTQLFRS*WDNSQLGARSA Trigger: AGCTGATCTTGCCCCTAACTGTGAATTGTCCCAGCATGACCTAAAAAGCTGCGTGTGTTTCCTTACAGGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR GCA 72 bp | GGCCGGAAACAGGGCTCCAAGTGGACAGTTCACTTATaGAATATCTGGCTTGAGATAATGAAAGGCACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GRKQGSKWTVHL*NIWLEIMKGTC Trigger: ACAGGTGCCTTTCATTATCTCAAGCCAGATATTGCATAAGTGAACTGTCCACTTGGAGCCCTGTTTCCGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR CCA 72 bp | TGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTaGACAGTTCACTTATGCAATATCTGGCTTGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: CLVCGGRKQGSK*TVHLCNIWLEI Trigger: TATCTCAAGCCAGATATTGCATAAGTGAACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTGGACAGTTCATGTCTCCCCTGCCTTTaGTCCAATATGTTCAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FFMSSLWRPETGLQVDSSCLPCL*SNMFKE Trigger: TTCTTTGAACATATTGGACAAAAGGCAGGGGAGACA...TGAACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR CCA 72 bp | CCTGTAAGGAAACACACGCAGCTTTTTAGGTCATGCTaGGACAATTCACAGTTAGGGGCAAGATCAGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: PVRKHTQLFRSC*DNSQLGARSAT Trigger: TGTAGCTGATCTTGCCCCTAACTGTGAATTGTCCCAGCATGACCTAAAAAGCTGCGTGTGTTTCCTTACAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| 3UTR-3UTR CAA 90 bp | ATCGGTTTCCAGTGTGTCAAAATCAAGGATTTCTCCATTCCCAATTCACTACATAGCTCTGGGTCTTCCTaGTCTCCCCTGCCTTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: IGFQCVKIKDFSIPNSLHSSGSS*SPLPFV Trigger: GACAAAAGGCAGGGGAGACAAGGAAGACCCAGAGCT...ATGTAGTGAATTGGGAATGGAGAAATCCTTGATTTTGACACACTGGAAACCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGGATTTCTCCATTCCCAATTAGCTCTGGGTCTTCCTaGTCTCCCCTGCCTTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: VFISVSSVSKSRISPFPISSGSS*SPLPFV Trigger: GACAAAAGGCAGGGGAGACAAGGAAGACCCAGAGCT...AATTGGGAATGGAGAAATCCTTGATTTTGACACACTGGAAACCGATATGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTTGATTCTCAGACATGGTCTCTGAACAAAAGGAACAAGCAGGATGTGAGTACACATCATTGTTGGTaGAGGCTGCAACACAAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: ELDSQTWSLNKRNKQDVSTHHCW*RLQHKD Trigger: ATCTTTGTGTTGCAGCCTCAACCAACAATGATGTGT...ACTCACATCCTGCTTGTTCCTTTTGTTCAGAGACCATGTCTGAGAATCAAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTTGATTCTCAGACATGGTCTCTGAACAAAAGGAACAAGCAGGATGTGAGTTACAACACATCATTGTaGGTTGAGGCTGCAACACAA | + |
|
Preference number: 3 (lower is better) Translates to: ELDSQTWSLNKRNKQDVSYNTSL*VEAATQ Trigger: TTGTGTTGCAGCCTCAACCAACAATGATGTGTTGTA...ACTCACATCCTGCTTGTTCCTTTTGTTCAGAGACCATGTCTGAGAATCAAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR CCA 72 bp | AAACACCATCTCTGTAGAGAGCTTGATTCTCAGACATaGTCTCTGAACAAAAGGAACAAGCAGGATGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: KHHLCRELDSQT*SLNKRNKQDVS Trigger: ACTCACATCCTGCTTGTTCCTTTTGTTCAGAGACCATGTCTGAGAATCAAGCTCTCTACAGAGATGGTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR TCA 72 bp | TTGGCAACGAGCAAACATCACTGCACTCTACTACGATaGGTTATGGGCTGCAAAAATAAAAACACCTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LATSKHHCTLLR*VMGCKNKNTCK Trigger: TTTGCAGGTGTTTTTATTTTTGCAGCCCATAACTCATCGTAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR CAA 90 bp | ACACACTACCTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCAGTGAGGTACACAGTATaGCACGCTGAGAAGCAGATA | + |
|
Preference number: 3 (lower is better) Translates to: THYLIVLKSKGNVFVPTSVRYTV*HAEKQI Trigger: TATCTGCTTCTCAGCGTGCAATACTGTGTACCTCAC...TGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAGGTAGTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR CAA 90 bp | CACTACCTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCATTCCAAGCAGGATGTGAGTaGTTTGGCAACGAGCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: HYLIVLKSKGNVFVPTSFQAGCE*FGNEQT Trigger: TGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTG...GAATGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAGGTAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR CAA 90 bp | CTATACAATGGTGGTGTTGGTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGTATACAATGGTGGTGTaGGTTTTCATATCGGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LYNGGVGFHIGFQCVKIKYTMVV*VFISVS Trigger: GGAAACCGATATGAAAACCAACACCACCATTGTATA...CTTGATTTTGACACACTGGAAACCGATATGAAAACCAACACCACCATTGTATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR CAA 90 bp | AATAACAGCACCGCCCACCTTCATCTTTCTCTTAACATTTCAAAACACAGATTTTTCATTTCTATCACCTaGGCCATTGCCAAAGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: NNSTAHLHLSLNISKHRFFISIT*AIAKAS Trigger: AGATGCTTTGGCAATGGCCAAGGTGATAGAAATGAA...AAATCTGTGTTTTGAAATGTTAAGAGAAAGATGAAGGTGGGCGGTGCTGTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR CAA 90 bp | ACACACTACCTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCATTCATTTCTATCACCTaGGCCATTGCCAAAGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: THYLIVLKSKGNVFVPTSFISIT*AIAKAS Trigger: AGATGCTTTGGCAATGGCCAAGGTGATAGAAATGAA...TGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAGGTAGTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCATTCATGGTTTGTCTCCCCTGCCTTTaGTCCAATATGTTCAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LIVLKSKGNVFVPTSFMVCLPCL*SNMFKE Trigger: TTCTTTGAACATATTGGACAAAAGGCAGGGGAGACA...AACCATGAATGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR CCA 72 bp | AAACCTGTTAACTTTCAGGAATTCAACTACAATATATaGGAACATTCTGCTTACTCAAACCACCCCGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KPVNFQEFNYNI*EHSAYSNHPVK Trigger: TTTCACGGGGTGGTTTGAGTAAGCAGAATGTTCCCATATATTGTAGTTGAATTCCTGAAAGTTAACAGGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | GATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTGGACAGTTCGGGCCGCATCATCCTaGGCACAGCGCCGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DSSCLVCGGRKQGSKWTVRAASS*AQRRPA Trigger: CGCTGGCCGGCGCTGTGCCCAGGATGATGCGGCCCG...AACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | TTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTGGACAGTTCACCTGCTTGGGTTTGCTaGCGCCGATGGCACCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FFMSSLWRPETGLQVDSSPAWVC*RRWHQV Trigger: GACCTGGTGCCATCGGCGGCAGCAAACCCAAGCAGG...TGAACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | TTGACACAACTCTGTGTCCTGGGCTTATCCCCATATGATCCTGGCGCTGACCTCGCGTTGTCACCTGCTTaGGTTTGCTGCCGCCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LTQLCVLGLSPYDPGADLALSPA*VCCRRW Trigger: CCATCGGCGGCAGCAAACCCAAGCAGGTGACAACGC...GAGGTCAGCGCCAGGATCATATGGGGATAAGCCCAGGACACAGAGTTGTGTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | GATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTGGACAGTTGTTCCAGGCCCCCAGTaGGAGGGGAGAGAGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: DSSCLVCGGRKQGSKWTVVPGPQ*EGREHS Trigger: ACTATGCTCTCTCCCCTCTCACTGGGGGCCTGGAAC...AACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | TTGACACAACTCTGTGTCCTGGGCTTATCCCCATATGATCCTGGCGCTGACCTCGTTCCAGTCTCTGACTaGAGCTGGCTGACACCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTQLCVLGLSPYDPGADLVPVSD*SWLTPW Trigger: CCACGGTGTCAGCCAGCTGCAGTCAGAGACTGGAAC...GAGGTCAGCGCCAGGATCATATGGGGATAAGCCCAGGACACAGAGTTGTGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | ACAGTATTGCACGCTGAGAAGCAGATATGTGATGGGTGTCACTTCCTCTACATCCGGGAAGCCGCTGCGTaGGTAATTCTGCCCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVLHAEKQICDGCHFLYIREAAA*VILPRA Trigger: GGCCCGGGGCAGAATTACCCACGCAGCGGCTTCCCG...GATGTAGAGGAAGTGACACCCATCACATATCTGCTTCTCAGCGTGCAATACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | TTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTGGACAGTTCACGACAGCTGGTATGTTaGCAGGGTCGGCATGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: FFMSSLWRPETGLQVDSSRQLVC*QGRHGG Trigger: ACCGCCATGCCGACCCTGCCAACATACCAGCTGTCG...TGAACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | GATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTGGACAGTTGTCTCTGACTGCAGCTaGCTGACACCGTGGTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSSCLVCGGRKQGSKWTVVSDCS*LTPWSW Trigger: CCACGACCACGGTGTCAGCCAGCTGCAGTCAGAGAC...AACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | ATGCTGGGACAATTCACAGTTAGGGGCAAGATCAGCTACAGGCTGACAATGTCACTCGGAGGAAGCGGCTaGGGTCTGTGGACGGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: MLGQFTVRGKISYRLTMSLGGSG*GLWTVL Trigger: TAGCACCGTCCACAGACCTCAGCCGCTTCCTCCGAG...TGACATTGTCAGCCTGTAGCTGATCTTGCCCCTAACTGTGAATTGTCCCAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | AAAGTACATGAGAGCCACGTGGACATTTCTGTTCTAGCCCTGCCTTTTGTAGAACGGGAAGCCGCTGCGTaGGTAATTCTGCCCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KVHESHVDISVLALPFVEREAAA*VILPRA Trigger: GGCCCGGGGCAGAATTACCCACGCAGCGGCTTCCCG...TTCTACAAAAGGCAGGGCTAGAACAGAAATGTCCACGTGGCTCTCATGTACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAGAAGATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTAAGCTTCGCCCTCTaGGCCAGCTCCTCCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLRRFFMSSLWRPETGLQVSFAL*ASSSLV Trigger: CACCAGGGAGGAGCTGGCCCAGAGGGCGAAGCTTAC...TTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATCTTCTCAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAGAAGATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAACGATGGTGGGGTTCATaGGGTTGGAGGGCCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: FLRRFFMSSLWRPETGLQRWWGS*GWRAPM Trigger: CATCGGGGCCCTCCAACCCCATGAACCCCACCATCG...TTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATCTTCTCAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | GATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTGGACAGTTCTGCGGTGCTATAGGTaGGGGGACAATAGGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DSSCLVCGGRKQGSKWTVLRCYR*GDNRAE Trigger: CTCAGCCCTATTGTCCCCCCACCTATAGCACCGCAG...AACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | CAGCTTTTTAGGTCATGCTGGGACAATTCACAGTTAGGGGCAAGATCAGCTACACTGACTGCAGCTGGCTaGCACCGTGGTCGTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLFRSCWDNSQLGARSATLTAAG*HRGRGF Trigger: GAACCCACGACCACGGTGTCAGCCAGCTGCAGTCAG...TGTAGCTGATCTTGCCCCTAACTGTGAATTGTCCCAGCATGACCTAAAAAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | ATGCTGGGACAATTCACAGTTAGGGGCAAGATCAGCTACAGGCTGACAATGTCATCACCTGCTTGGGTTTaGTGCCGCCGATGGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: MLGQFTVRGKISYRLTMSSPAWV*CRRWHQ Trigger: CTGGTGCCATCGGCGGCAGCAAACCCAAGCAGGTGA...TGACATTGTCAGCCTGTAGCTGATCTTGCCCCTAACTGTGAATTGTCCCAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | GATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTGGACAGTTTGCTTTGGTGTACAGTaGTCGGAGGAAGCGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DSSCLVCGGRKQGSKWTVCFGVQ*SEEAAE Trigger: CTCAGCCGCTTCCTCCGAGCACTGTACACCAAAGCA...AACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | GATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTGGACAGTTGGCAGTAGGCAGAGCTaGTGTCTGCGTTCGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DSSCLVCGGRKQGSKWTVGSRQS*CLRSKE Trigger: TTCCTTCGAACGCAGACAGCAGCTCTGCCTACTGCC...AACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | CTATACAATGGTGGTGTTGGTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGCGGGCCGCATCATCCTaGGCACAGCGCCGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LYNGGVGFHIGFQCVKIKRAASS*AQRRPA Trigger: CGCTGGCCGGCGCTGTGCCCAGGATGATGCGGCCCG...CTTGATTTTGACACACTGGAAACCGATATGAAAACCAACACCACCATTGTATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | AAAGTACATGAGAGCCACGTGGACATTTCTGTTCTAGCCCTGCCTTTTGTAGAATTGGCAGGGTCGGCATaGCGGTGGGAGGGAATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KVHESHVDISVLALPFVELAGSA*RWEGIP Trigger: GGGGATTCCCTCCCACCGCCATGCCGACCCTGCCAA...TTCTACAAAAGGCAGGGCTAGAACAGAAATGTCCACGTGGCTCTCATGTACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | GATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTGGACAGTTATATGTTCCAGTCTCTaGCTGCAGCTGGCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: DSSCLVCGGRKQGSKWTVICSSL*LQLADT Trigger: GGTGTCAGCCAGCTGCAGTCAGAGACTGGAACATAT...AACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAGAAGATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAAGGTGGTTCTGCTCCTaGGCTGCTTCCTCTTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FLRRFFMSSLWRPETGLQRWFCS*AASSSA Trigger: CGCTGAAGAGGAAGCAGCGCAGGAGCAGAACCACCT...TTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATCTTCTCAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | GCTCTGGGTCTTCCTTGTCTCCCCTGCCTTTTGTCCAATATGTTCAAAGAATCTGAGGTCTCCGACAGCTaGTATGTTGGCAGGGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALGLPCLPCLLSNMFKESEVSDS*YVGRVG Trigger: GCCGACCCTGCCAACATACCAGCTGTCGGAGACCTC...AGATTCTTTGAACATATTGGACAAAAGGCAGGGGAGACAAGGAAGACCCAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | GAGCTTGATTCTCAGACATGGTCTCTGAACAAAAGGAACAAGCAGGATGTGAGTCGATGGTGGGGTTCATaGGGTTGGAGGGCCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: ELDSQTWSLNKRNKQDVSRWWGS*GWRAPM Trigger: CATCGGGGCCCTCCAACCCCATGAACCCCACCATCG...ACTCACATCCTGCTTGTTCCTTTTGTTCAGAGACCATGTCTGAGAATCAAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | TTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTGGACAGTTCAGTACCCCACCGTGGTTaGTCAGAAGTCCCATTACCT | + |
|
Preference number: 4 (lower is better) Translates to: FFMSSLWRPETGLQVDSSVPHRG*SEVPLP Trigger: AGGTAATGGGACTTCTGACCAACCACGGTGGGGTAC...TGAACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | AAAGAGACGAATGTAAACACCATCTCTGTAGAGAGCTTGATTCTCAGACATGGTCTCCTCCGAGCTGGTTaGCTCGGCCCTGGCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KETNVNTISVESLILRHGLLRAG*LGPGQE Trigger: CTCTTGGCCAGGGCCGAGTCAACCAGCTCGGAGGAG...ACCATGTCTGAGAATCAAGCTCTCTACAGAGATGGTGTTTACATTCGTCTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | ACAGTATTGCACGCTGAGAAGCAGATATGTGATGGGTGTCACTTCCTCTACATCATCGGAGCCTTCATCTaGCTGAGGTGCAGAGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TVLHAEKQICDGCHFLYIIGAFI*LRCRGS Trigger: CGAGCCTCTGCACCTCAGTCAGATGAAGGCTCCGAT...GATGTAGAGGAAGTGACACCCATCACATATCTGCTTCTCAGCGTGCAATACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | GATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTGGACAGTTATGGAGCCTGTCTCCTaGTACCTGCACAGGATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: DSSCLVCGGRKQGSKWTVMEPVS*YLHRIL Trigger: TAAGATCCTGTGCAGGTACCAGGAGACAGGCTCCAT...AACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | TGGTCTCTGAACAAAAGGAACAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAAGAGGTCTCCGACAGCTaGTATGTTGGCAGGGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: WSLNKRNKQDVSCLATSKEVSDS*YVGRVG Trigger: GCCGACCCTGCCAACATACCAGCTGTCGGAGACCTC...TTTGCTCGTTGCCAAACAACTCACATCCTGCTTGTTCCTTTTGTTCAGAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | GCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTACGATGTGTGGACGGTGCTACTaGGATCTGACACGGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGCELFGNEQTSLHSTTMCGRCY*DLTRLV Trigger: CACAAGCCGTGTCAGATCCCAGTAGCACCGTCCACA...CATCGTAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | GCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTACGATGAAAGGCCATTGCCGATaGTGGGGTTCATGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGCELFGNEQTSLHSTTMKGHCR*WGSWGW Trigger: CCAACCCCATGAACCCCACCATCGGCAATGGCCTTT...CATCGTAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | GCTCTGGGTCTTCCTTGTCTCCCCTGCCTTTTGTCCAATATGTTCAAAGAATCTCTGCGGTGCTATAGGTaGGGGGACAATAGGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALGLPCLPCLLSNMFKESLRCYR*GDNRAE Trigger: CTCAGCCCTATTGTCCCCCCACCTATAGCACCGCAG...AGATTCTTTGAACATATTGGACAAAAGGCAGGGGAGACAAGGAAGACCCAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | AACAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTAGAGCCTTCATCTGACTaGGGTGCAGAGGCTCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NKQDVSCLATSKHHCTLLEPSSD*GAEARS Trigger: TGAGCGAGCCTCTGCACCTCAGTCAGATGAAGGCTC...TAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | GCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTACGATGTCCCATTACCTGAGGTaGAAGGCCATTGCCGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGCELFGNEQTSLHSTTMSHYLR*KAIADG Trigger: ACCATCGGCAATGGCCTTTCACCTCAGGTAATGGGA...CATCGTAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | TTTCTGAGAAGATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAATCCCATTACCTGAGGTaGAAGGCCATTGCCGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLRRFFMSSLWRPETGLQSHYLR*KAIADG Trigger: ACCATCGGCAATGGCCTTTCACCTCAGGTAATGGGA...TTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATCTTCTCAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | TTTCTGAGAAGATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAACATACTGGTAGCCTGTaGCAGGGTCCATACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLRRFFMSSLWRPETGLQHTGSL*QGPYCS Trigger: GCTACAGTATGGACCCTGTCACAGGCTACCAGTATG...TTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATCTTCTCAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | CAGCTTTTTAGGTCATGCTGGGACAATTCACAGTTAGGGGCAAGATCAGCTACAGAGGTGAAAGGCCATTaGCGATGGTGGGGTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QLFRSCWDNSQLGARSATEVKGH*RWWGSW Trigger: CCATGAACCCCACCATCGGCAATGGCCTTTCACCTC...TGTAGCTGATCTTGCCCCTAACTGTGAATTGTCCCAGCATGACCTAAAAAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | TGGTCTCTGAACAAAAGGAACAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAAGTTCCAGTCTCTGACTaGAGCTGGCTGACACCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WSLNKRNKQDVSCLATSKVPVSD*SWLTPW Trigger: CCACGGTGTCAGCCAGCTGCAGTCAGAGACTGGAAC...TTTGCTCGTTGCCAAACAACTCACATCCTGCTTGTTCCTTTTGTTCAGAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | GAGCTTGATTCTCAGACATGGTCTCTGAACAAAAGGAACAAGCAGGATGTGAGTAATACTCCTCCGAGCTaGTTGACTCGGCCCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELDSQTWSLNKRNKQDVSNTPPS*LTRPWP Trigger: TGGCCAGGGCCGAGTCAACCAGCTCGGAGGAGTATT...ACTCACATCCTGCTTGTTCCTTTTGTTCAGAGACCATGTCTGAGAATCAAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | AAAGTACATGAGAGCCACGTGGACATTTCTGTTCTAGCCCTGCCTTTTGTAGAATGGGACACGCGAAGCTaGCGAGAAATGACGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KVHESHVDISVLALPFVEWDTRS*REMTQG Trigger: GCCTTGCGTCATTTCTCGCCAGCTTCGCGTGTCCCA...TTCTACAAAAGGCAGGGCTAGAACAGAAATGTCCACGTGGCTCTCATGTACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | ACACACTACCTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCACTCCTCCGAGCTGGTTaGCTCGGCCCTGGCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: THYLIVLKSKGNVFVPTSLLRAG*LGPGQE Trigger: CTCTTGGCCAGGGCCGAGTCAACCAGCTCGGAGGAG...TGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAGGTAGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | TCATATCGGTTTCCAGTGTGTCAAAATCAAGGATTTCTCCATTCCCAATTCACTCTCGGAGGAAGCGGCTaGGGTCTGTGGACGGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SYRFPVCQNQGFLHSQFTLGGSG*GLWTVL Trigger: TAGCACCGTCCACAGACCTCAGCCGCTTCCTCCGAG...AGTGAATTGGGAATGGAGAAATCCTTGATTTTGACACACTGGAAACCGATATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | CTATACAATGGTGGTGTTGGTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGCCTGCTTGGGTTTGCTaGCGCCGATGGCACCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LYNGGVGFHIGFQCVKIKPAWVC*RRWHQV Trigger: GACCTGGTGCCATCGGCGGCAGCAAACCCAAGCAGG...CTTGATTTTGACACACTGGAAACCGATATGAAAACCAACACCACCATTGTATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | AACAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTATGCTTTGGTGTACAGTaGTCGGAGGAAGCGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NKQDVSCLATSKHHCTLLCFGVQ*SEEAAE Trigger: CTCAGCCGCTTCCTCCGAGCACTGTACACCAAAGCA...TAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | AAAGTACATGAGAGCCACGTGGACATTTCTGTTCTAGCCCTGCCTTTTGTAGAAAAAATCCATGCCTGGTaGTGGGGAGGCAGTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KVHESHVDISVLALPFVEKIHAW*WGGSRQ Trigger: CTGCCTACTGCCTCCCCAGCACCAGGCATGGATTTT...TTCTACAAAAGGCAGGGCTAGAACAGAAATGTCCACGTGGCTCTCATGTACTTT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTACGATGGAGCCTGTCTCCTaGTACCTGCACAGGATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QAGCELFGNEQTSLHSTTMEPVS*YLHRIL Trigger: TAAGATCCTGTGCAGGTACCAGGAGACAGGCTCCAT...CGTAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | AATAACAGCACCGCCCACCTTCATCTTTCTCTTAACATTTCAAAACACAGATTTTTGGCAGGGTCGGCATaGCGGTGGGAGGGAATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NNSTAHLHLSLNISKHRFLAGSA*RWEGIP Trigger: GGGGATTCCCTCCCACCGCCATGCCGACCCTGCCAA...AAATCTGTGTTTTGAAATGTTAAGAGAAAGATGAAGGTGGGCGGTGCTGTTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | ACAGTATTGCACGCTGAGAAGCAGATATGTGATGGGTGTCACTTCCTCTACATCTTGAAAATCCATGCCTaGTGCTGGGGAGGCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVLHAEKQICDGCHFLYILKIHA*CWGGSR Trigger: CCTACTGCCTCCCCAGCACCAGGCATGGATTTTCAA...GATGTAGAGGAAGTGACACCCATCACATATCTGCTTCTCAGCGTGCAATACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | AAAGAGACGAATGTAAACACCATCTCTGTAGAGAGCTTGATTCTCAGACATGGTGGCCATTGCCGATGGTaGGGTTCATGGGGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KETNVNTISVESLILRHGGHCRW*GSWGWR Trigger: CCTCCAACCCCATGAACCCCACCATCGGCAATGGCC...ACCATGTCTGAGAATCAAGCTCTCTACAGAGATGGTGTTTACATTCGTCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | AACAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTAAAAGGCCATTGCCGATaGTGGGGTTCATGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NKQDVSCLATSKHHCTLLKGHCR*WGSWGW Trigger: CCAACCCCATGAACCCCACCATCGGCAATGGCCTTT...TAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR CAA 72 bp | TTGGCCATTGCCAAAGCATCTGTGAGGTACACAGTATaGCACGCTGAGAAGCAGATATGTGATGGGTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LAIAKASVRYTV*HAEKQICDGCH Trigger: GTGACACCCATCACATATCTGCTTCTCAGCGTGCAATACTGTGTACCTCACAGATGCTTTGGCAATGGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | CAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTACGGCTGTCTGTATAGCTTaGAAATCCATGCCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QAGCELFGNEQTSLHSTTAVCIA*KSMPGA Trigger: AGCACCAGGCATGGATTTTCAAGCTATACAGACAGC...CGTAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | CACCATCTCTGTAGAGAGCTTGATTCTCAGACATGGTCTCTGAACAAAAGGAACCATACTGGTAGCCTGTaGCAGGGTCCATACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HHLCRELDSQTWSLNKRNHTGSL*QGPYCS Trigger: GCTACAGTATGGACCCTGTCACAGGCTACCAGTATG...GTTCCTTTTGTTCAGAGACCATGTCTGAGAATCAAGCTCTCTACAGAGATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | CTATACAATGGTGGTGTTGGTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGTCACCTGCTTGGGTTTaGTGCCGCCGATGGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYNGGVGFHIGFQCVKIKSPAWV*CRRWHQ Trigger: CTGGTGCCATCGGCGGCAGCAAACCCAAGCAGGTGA...CTTGATTTTGACACACTGGAAACCGATATGAAAACCAACACCACCATTGTATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | AAAGTACATGAGAGCCACGTGGACATTTCTGTTCTAGCCCTGCCTTTTGTAGAAGTTCTGCTCCTGCGCTaGTTCCTCTTCAGCGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KVHESHVDISVLALPFVEVLLLR*FLFSGK Trigger: TTTACCGCTGAAGAGGAAGCAGCGCAGGAGCAGAAC...TTCTACAAAAGGCAGGGCTAGAACAGAAATGTCCACGTGGCTCTCATGTACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | AACAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTAGGCAGAGCTGCTGTCTaGGTTCGAAGGAATAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKQDVSCLATSKHHCTLLGRAAV*VRRNSA Trigger: AGCACTATTCCTTCGAACGCAGACAGCAGCTCTGCC...TAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | TCATATCGGTTTCCAGTGTGTCAAAATCAAGGATTTCTCCATTCCCAATTCACTGCGTTGTCACCTGCTTaGGTTTGCTGCCGCCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SYRFPVCQNQGFLHSQFTALSPA*VCCRRW Trigger: CCATCGGCGGCAGCAAACCCAAGCAGGTGACAACGC...AGTGAATTGGGAATGGAGAAATCCTTGATTTTGACACACTGGAAACCGATATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | CATTTTTACAACACATCATTGTTGGTTGAGGCTGCAACACAAAGATACTATGTCGTAAGCTTCGCCCTCTaGGCCAGCTCCTCCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HFYNTSLLVEAATQRYYVVSFAL*ASSSLV Trigger: CACCAGGGAGGAGCTGGCCCAGAGGGCGAAGCTTAC...GACATAGTATCTTTGTGTTGCAGCCTCAACCAACAATGATGTGTTGTAAAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAGAAGATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAAAGCCATCAGTTGATTaGCTCCAGCTTGTTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLRRFFMSSLWRPETGLQKPSVD*LQLVSS Trigger: GGAGGAAACAAGCTGGAGCCAATCAACTGATGGCTT...TTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATCTTCTCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | CTATACAATGGTGGTGTTGGTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGGAGCCTTCATCTGACTaGGGTGCAGAGGCTCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LYNGGVGFHIGFQCVKIKEPSSD*GAEARS Trigger: TGAGCGAGCCTCTGCACCTCAGTCAGATGAAGGCTC...CTTGATTTTGACACACTGGAAACCGATATGAAAACCAACACCACCATTGTATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | CAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTACGTTGAAAGCCATCAGTTaGTTGGCTCCAGCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QAGCELFGNEQTSLHSTTLKAIS*LAPACF Trigger: GAAACAAGCTGGAGCCAATCAACTGATGGCTTTCAA...CGTAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | GTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGGATTTCTCCATTCCCAATTGTTCCAGGCCCCCAGTaGGAGGGGAGAGAGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFISVSSVSKSRISPFPIVPGPQ*EGREHS Trigger: ACTATGCTCTCTCCCCTCTCACTGGGGGCCTGGAAC...AATTGGGAATGGAGAAATCCTTGATTTTGACACACTGGAAACCGATATGAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | CTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCATTCATGGTTCTGACTGCAGCTGGCTaGCACCGTGGTCGTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LIVLKSKGNVFVPTSFMVLTAAG*HRGRGF Trigger: GAACCCACGACCACGGTGTCAGCCAGCTGCAGTCAG...AACCATGAATGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | ATCGGTTTCCAGTGTGTCAAAATCAAGGATTTCTCCATTCCCAATTCACTACATAGGTGGTTCTGCTCCTaGGCTGCTTCCTCTTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IGFQCVKIKDFSIPNSLHRWFCS*AASSSA Trigger: CGCTGAAGAGGAAGCAGCGCAGGAGCAGAACCACCT...ATGTAGTGAATTGGGAATGGAGAAATCCTTGATTTTGACACACTGGAAACCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | GCTCTGGGTCTTCCTTGTCTCCCCTGCCTTTTGTCCAATATGTTCAAAGAATCTTTGTTTCCTCCATCTTaGACGGCGGTTGCTAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: ALGLPCLPCLLSNMFKESLFPPS*TAVAKP Trigger: TGGTTTAGCAACCGCCGTGCAAGATGGAGGAAACAA...AGATTCTTTGAACATATTGGACAAAAGGCAGGGGAGACAAGGAAGACCCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | ACACACTACCTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCATGGTTGACTCGGCCCTaGCCAAGAGGGGTGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: THYLIVLKSKGNVFVPTSWLTRP*PRGVDT Trigger: AGTGTCCACCCCTCTTGGCCAGGGCCGAGTCAACCA...TGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAGGTAGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | CTATACAATGGTGGTGTTGGTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGTGGGACACGCGAAGCTaGCGAGAAATGACGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LYNGGVGFHIGFQCVKIKWDTRS*REMTQG Trigger: GCCTTGCGTCATTTCTCGCCAGCTTCGCGTGTCCCA...CTTGATTTTGACACACTGGAAACCGATATGAAAACCAACACCACCATTGTATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | CACTACCTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCATTCCGACAGCTGGTATGTTaGCAGGGTCGGCATGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HYLIVLKSKGNVFVPTSFRQLVC*QGRHGG Trigger: ACCGCCATGCCGACCCTGCCAACATACCAGCTGTCG...GAATGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAGGTAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | TCATATCGGTTTCCAGTGTGTCAAAATCAAGGATTTCTCCATTCCCAATTCACTGTTGGAGGGCCCCGATaGAGGCACAAAGCTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SYRFPVCQNQGFLHSQFTVGGPR*RHKAVC Trigger: ACAGACAGCTTTGTGCCTCCATCGGGGCCCTCCAAC...AGTGAATTGGGAATGGAGAAATCCTTGATTTTGACACACTGGAAACCGATATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | CACTACCTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCATTCGGCCATTGCCGATGGTaGGGTTCATGGGGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HYLIVLKSKGNVFVPTSFGHCRW*GSWGWR Trigger: CCTCCAACCCCATGAACCCCACCATCGGCAATGGCC...GAATGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAGGTAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | AATAACAGCACCGCCCACCTTCATCTTTCTCTTAACATTTCAAAACACAGATTTGTCTCTGACTGCAGCTaGCTGACACCGTGGTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NNSTAHLHLSLNISKHRFVSDCS*LTPWSW Trigger: CCACGACCACGGTGTCAGCCAGCTGCAGTCAGAGAC...AAATCTGTGTTTTGAAATGTTAAGAGAAAGATGAAGGTGGGCGGTGCTGTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | AACAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTATTGTTTCCTCCATCTTaGACGGCGGTTGCTAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: NKQDVSCLATSKHHCTLLLFPPS*TAVAKP Trigger: TGGTTTAGCAACCGCCGTGCAAGATGGAGGAAACAA...TAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | CATTTTTACAACACATCATTGTTGGTTGAGGCTGCAACACAAAGATACTATGTCGAGGTCTGTGGACGGTaGTACTGGGATCTGACACGG | + |
|
Preference number: 4 (lower is better) Translates to: HFYNTSLLVEAATQRYYVEVCGR*YWDLTR Trigger: CCGTGTCAGATCCCAGTAGCACCGTCCACAGACCTC...GACATAGTATCTTTGTGTTGCAGCCTCAACCAACAATGATGTGTTGTAAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | GACATTTTTACAACACATCATTGTTGGTTGAGGCTGCAACACAAAGATACTATGAATACTCCTCCGAGCTaGTTGACTCGGCCCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DIFTTHHCWLRLQHKDTMNTPPS*LTRPWP Trigger: TGGCCAGGGCCGAGTCAACCAGCTCGGAGGAGTATT...CATAGTATCTTTGTGTTGCAGCCTCAACCAACAATGATGTGTTGTAAAAATGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | GTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGGATTTCTCCATTCCCAATTGTTGGAGGGCCCCGATaGAGGCACAAAGCTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFISVSSVSKSRISPFPIVGGPR*RHKAVC Trigger: ACAGACAGCTTTGTGCCTCCATCGGGGCCCTCCAAC...AATTGGGAATGGAGAAATCCTTGATTTTGACACACTGGAAACCGATATGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | CTATACAATGGTGGTGTTGGTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGTGCGGTACCCCACCGTaGTTGGTCAGAAGTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LYNGGVGFHIGFQCVKIKCGTPP*LVRSPI Trigger: AATGGGACTTCTGACCAACCACGGTGGGGTACCGCA...CTTGATTTTGACACACTGGAAACCGATATGAAAACCAACACCACCATTGTATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | ATCGGTTTCCAGTGTGTCAAAATCAAGGATTTCTCCATTCCCAATTCACTACATTGCGGTACCCCACCGTaGTTGGTCAGAAGTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: IGFQCVKIKDFSIPNSLHCGTPP*LVRSPI Trigger: AATGGGACTTCTGACCAACCACGGTGGGGTACCGCA...ATGTAGTGAATTGGGAATGGAGAAATCCTTGATTTTGACACACTGGAAACCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | CTATACAATGGTGGTGTTGGTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGATATGTTCCAGTCTCTaGCTGCAGCTGGCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: LYNGGVGFHIGFQCVKIKICSSL*LQLADT Trigger: GGTGTCAGCCAGCTGCAGTCAGAGACTGGAACATAT...CTTGATTTTGACACACTGGAAACCGATATGAAAACCAACACCACCATTGTATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | CTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCATTCATGGTTGAGGTCTGTGGACGGTaGTACTGGGATCTGACACGG | + |
|
Preference number: 4 (lower is better) Translates to: LIVLKSKGNVFVPTSFMVEVCGR*YWDLTR Trigger: CCGTGTCAGATCCCAGTAGCACCGTCCACAGACCTC...AACCATGAATGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | GACATTTTTACAACACATCATTGTTGGTTGAGGCTGCAACACAAAGATACTATGGGCAGTAGGCAGAGCTaGTGTCTGCGTTCGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DIFTTHHCWLRLQHKDTMGSRQS*CLRSKE Trigger: TTCCTTCGAACGCAGACAGCAGCTCTGCCTACTGCC...CATAGTATCTTTGTGTTGCAGCCTCAACCAACAATGATGTGTTGTAAAAATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | CATTTTTACAACACATCATTGTTGGTTGAGGCTGCAACACAAAGATACTATGTCGAGGTGAAAGGCCATTaGCGATGGTGGGGTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: HFYNTSLLVEAATQRYYVEVKGH*RWWGSW Trigger: CCATGAACCCCACCATCGGCAATGGCCTTTCACCTC...GACATAGTATCTTTGTGTTGCAGCCTCAACCAACAATGATGTGTTGTAAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR CAA 72 bp | TCTCTGAACAAAAGGAACAAGCAGGATGTGAGTTGTTaGGCAACGAGCAAACATCACTGCACTCTACTACGA | + |
|
Preference number: 4 (lower is better) Translates to: SLNKRNKQDVSC*ATSKHHCTLLR Trigger: TCGTAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTGTTCCTTTTGTTCAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR CAA 72 bp | ATGGTCTCTGAACAAAAGGAACAAGCAGGATGTGAGTaGTTTGGCAACGAGCAAACATCACTGCACTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: MVSEQKEQAGCE*FGNEQTSLHST Trigger: AGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTGTTCCTTTTGTTCAGAGACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | CTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCATTCATGGTTAAAATCCATGCCTGGTaGTGGGGAGGCAGTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIVLKSKGNVFVPTSFMVKIHAW*WGGSRQ Trigger: CTGCCTACTGCCTCCCCAGCACCAGGCATGGATTTT...AACCATGAATGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | CTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCATTCATGGTTTGTGGACGGTGCTACTaGGATCTGACACGGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LIVLKSKGNVFVPTSFMVCGRCY*DLTRLV Trigger: CACAAGCCGTGTCAGATCCCAGTAGCACCGTCCACA...AACCATGAATGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | GTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGGATTTCTCCATTCCCAATTTTGAAAATCCATGCCTaGTGCTGGGGAGGCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VFISVSSVSKSRISPFPILKIHA*CWGGSR Trigger: CCTACTGCCTCCCCAGCACCAGGCATGGATTTTCAA...AATTGGGAATGGAGAAATCCTTGATTTTGACACACTGGAAACCGATATGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | GACATTTTTACAACACATCATTGTTGGTTGAGGCTGCAACACAAAGATACTATGGTACCCCACCGTGGTTaGTCAGAAGTCCCATTACCT | + |
|
Preference number: 4 (lower is better) Translates to: DIFTTHHCWLRLQHKDTMVPHRG*SEVPLP Trigger: AGGTAATGGGACTTCTGACCAACCACGGTGGGGTAC...CATAGTATCTTTGTGTTGCAGCCTCAACCAACAATGATGTGTTGTAAAAATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR GCA 90 bp | CTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCATTCATGGTTGGCAGAGCTGCTGTCTaGGTTCGAAGGAATAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LIVLKSKGNVFVPTSFMVGRAAV*VRRNSA Trigger: AGCACTATTCCTTCGAACGCAGACAGCAGCTCTGCC...AACCATGAATGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | ATCGGTTTCCAGTGTGTCAAAATCAAGGATTTCTCCATTCCCAATTCACTACATGAAGGAATAGTGCTTTaGTGTACAGTGCTCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IGFQCVKIKDFSIPNSLHEGIVL*CTVLGG Trigger: TCCTCCGAGCACTGTACACCAAAGCACTATTCCTTC...ATGTAGTGAATTGGGAATGGAGAAATCCTTGATTTTGACACACTGGAAACCGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | GACATTTTTACAACACATCATTGTTGGTTGAGGCTGCAACACAAAGATACTATGGCTGTCTGTATAGCTTaGAAATCCATGCCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DIFTTHHCWLRLQHKDTMAVCIA*KSMPGA Trigger: AGCACCAGGCATGGATTTTCAAGCTATACAGACAGC...CATAGTATCTTTGTGTTGCAGCCTCAACCAACAATGATGTGTTGTAAAAATGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | GTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGGATTTCTCCATTCCCAATTAAGCCATCAGTTGATTaGCTCCAGCTTGTTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFISVSSVSKSRISPFPIKPSVD*LQLVSS Trigger: GGAGGAAACAAGCTGGAGCCAATCAACTGATGGCTT...AATTGGGAATGGAGAAATCCTTGATTTTGACACACTGGAAACCGATATGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | ACACACTACCTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCAGAAGGAATAGTGCTTTaGTGTACAGTGCTCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: THYLIVLKSKGNVFVPTSEGIVL*CTVLGG Trigger: TCCTCCGAGCACTGTACACCAAAGCACTATTCCTTC...TGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAGGTAGTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | ACACACTACCTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCAAATAGGGCTGAGATGTaGGCAGACTGTCCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: THYLIVLKSKGNVFVPTSNRAEM*ADCPHS Trigger: AGAATGTGGACAGTCTGCCCACATCTCAGCCCTATT...TGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAGGTAGTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | CATTTTTACAACACATCATTGTTGGTTGAGGCTGCAACACAAAGATACTATGTCTTGAAAGCCATCAGTTaGTTGGCTCCAGCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HFYNTSLLVEAATQRYYVLKAIS*LAPACF Trigger: GAAACAAGCTGGAGCCAATCAACTGATGGCTTTCAA...GACATAGTATCTTTGTGTTGCAGCCTCAACCAACAATGATGTGTTGTAAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CCA 90 bp | CTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCATTCATGGTTAATAGGGCTGAGATGTaGGCAGACTGTCCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIVLKSKGNVFVPTSFMVNRAEM*ADCPHS Trigger: AGAATGTGGACAGTCTGCCCACATCTCAGCCCTATT...AACCATGAATGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR CAA 72 bp | TTCACATCTAGTCTAGTGCCCTATACAATGGTGGTGTaGGTTTTCATATCGGTTTCCAGTGTGTCAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: FTSSLVPYTMVV*VFISVSSVSKS Trigger: TGATTTTGACACACTGGAAACCGATATGAAAACCAACACCACCATTGTATAGGGCACTAGACTAGATGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| 3UTR CAA 72 bp | AGAACATGTGTTTCTAATGCTAGAGGTTATTTCATTTaGGCCAACCTCTGTGTTTTACCTACTGACAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: RTCVSNARGYFI*ANLCVLPTDNP Trigger: CGGATTGTCAGTAGGTAAAACACAGAGGTTGGCCAAAATGAAATAACCTCTAGCATTAGAAACACATGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| CDS-3UTR TCA 90 bp | CTATACAATGGTGGTGTTGGTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGATGCAATATCTGGCTTaGGATAATGAAAGGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LYNGGVGFHIGFQCVKIKMQYLA*DNERHF Trigger: AAAGTGCCTTTCATTATCTCAAGCCAGATATTGCAT...CTTGATTTTGACACACTGGAAACCGATATGAAAACCAACACCACCATTGTATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004994.16 |
||
| 3UTR CAA 72 bp | AGCTTCTTTGATCAGCAACAAAGATTTGGGGCCATTTaGATATGTAGCCAGTTACATCACTGTCTTAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFFDQQQRFGAI*ICSQLHHCLKN Trigger: ATTTTTAAGACAGTGATGTAACTGGCTACATATCAAAATGGCCCCAAATCTTTGTTGCTGATCAAAGAAGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS TCA 90 bp | GACTGCAGCTGGCTGACACCGTGGTCGTGGGTTCCAGGCCCCCAGTaGGAGGGGAGAGAGCATAGTCGGTCTGAGGCTGGTGCGGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: DCSWLTPWSWVPGPQ*EGREHSRSEAGAVP Trigger: GGGTACCGCACCAGCCTCAGACCGACTATGCTCTCTCCCCTCTCACTGGGGGCCTGGAACCCACGACCACGGTGTCAGCCAGCTGCAGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS TCA 90 bp | ACTGTCCACATTCTTCATATGTTCCAGTCTCTGACTGCAGCTGGCTaGCACCGTGGTCGTGGGTTCCAGGCCCCCAGTGAGAGGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TVHILHMFQSLTAAG*HRGRGFQAPSERGE Trigger: CTCTCCCCTCTCACTGGGGGCCTGGAACCCACGACCACGGTGTCAGCCAGCTGCAGTCAGAGACTGGAACATATGAAGAATGTGGACAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | TTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTGGACAGTTCAACTCCTCCGAGCTGGTaGACTCGGCCCTGGCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FFMSSLWRPETGLQVDSSTPPSW*TRPWPR Trigger: TCTTGGCCAGGGCCGAGTCAACCAGCTCGGAGGAGT...TGAACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS TCA 90 bp | TTCGAAGGAATAGTGCTTTGGTGTACAGTGCTCGGAGGAAGCGGCTaGGGTCTGTGGACGGTGCTACTGGGATCTGACACGGCTTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FEGIVLWCTVLGGSG*GLWTVLLGSDTACG Trigger: TCCACAAGCCGTGTCAGATCCCAGTAGCACCGTCCACAGACCTCAGCCGCTTCCTCCGAGCACTGTACACCAAAGCACTATTCCTTCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | CAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTACGGTCACCTGCTTGGGTTaGCTGCCGCCGATGGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: QAGCELFGNEQTSLHSTTVTCLG*LPPMAP Trigger: TGGTGCCATCGGCGGCAGCAAACCCAAGCAGGTGAC...CGTAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS GCA 90 bp | ATGGAGGCACAAAGCTGTCTGTATAGCTTGAAAATCCATGCCTGGTaGTGGGGAGGCAGTAGGCAGAGCTGCTGTCTGCGTTCGAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: MEAQSCLYSLKIHAW*WGGSRQSCCLRSKE Trigger: TTCCTTCGAACGCAGACAGCAGCTCTGCCTACTGCCTCCCCAGCACCAGGCATGGATTTTCAAGCTATACAGACAGCTTTGTGCCTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | AAAGTACATGAGAGCCACGTGGACATTTCTGTTCTAGCCCTGCCTTTTGTAGAACCGACAGCTGGTATGTaGGCAGGGTCGGCATGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KVHESHVDISVLALPFVEPTAGM*AGSAWR Trigger: CCGCCATGCCGACCCTGCCAACATACCAGCTGTCGG...TTCTACAAAAGGCAGGGCTAGAACAGAAATGTCCACGTGGCTCTCATGTACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | TTGACACAACTCTGTGTCCTGGGCTTATCCCCATATGATCCTGGCGCTGACCTCCGAAGGAATAGTGCTTaGGTGTACAGTGCTCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTQLCVLGLSPYDPGADLRRNSA*VYSARR Trigger: CCTCCGAGCACTGTACACCAAAGCACTATTCCTTCG...GAGGTCAGCGCCAGGATCATATGGGGATAAGCCCAGGACACAGAGTTGTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | AACAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTATTGTGGCGGATATGGTaGGGCAGAGGCCTGCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NKQDVSCLATSKHHCTLLLWRIW*GRGLPL Trigger: CAACGGCAGGCCTCTGCCCAACCATATCCGCCACAA...TAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | GCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTACGATGCATCTTGCACGGCGGTaGCTAAACCAGACCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: AGCELFGNEQTSLHSTTMHLARR*LNQTCT Trigger: AGTGCAGGTCTGGTTTAGCAACCGCCGTGCAAGATG...CATCGTAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | CTATACAATGGTGGTGTTGGTTTTCATATCGGTTTCCAGTGTGTCAAAATCAAGCCGACAGCTGGTATGTaGGCAGGGTCGGCATGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LYNGGVGFHIGFQCVKIKPTAGM*AGSAWR Trigger: CCGCCATGCCGACCCTGCCAACATACCAGCTGTCGG...CTTGATTTTGACACACTGGAAACCGATATGAAAACCAACACCACCATTGTATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | CACCATCTCTGTAGAGAGCTTGATTCTCAGACATGGTCTCTGAACAAAAGGAACGGTACCCCACCGTGGTaGGTCAGAAGTCCCATTACC | + |
|
Preference number: 5 (lower is better) Translates to: HHLCRELDSQTWSLNKRNGTPPW*VRSPIT Trigger: GGTAATGGGACTTCTGACCAACCACGGTGGGGTACC...GTTCCTTTTGTTCAGAGACCATGTCTGAGAATCAAGCTCTCTACAGAGATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | GATTCTTCATGTCTAGTCTGTGGAGGCCGGAAACAGGGCTCCAAGTGGACAGTTGTTGAAAGCCATCAGTaGATTGGCTCCAGCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: DSSCLVCGGRKQGSKWTVVESHQ*IGSSLF Trigger: AAACAAGCTGGAGCCAATCAACTGATGGCTTTCAAC...AACTGTCCACTTGGAGCCCTGTTTCCGGCCTCCACAGACTAGACATGAAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | AATAACAGCACCGCCCACCTTCATCTTTCTCTTAACATTTCAAAACACAGATTTACTCCTCCGAGCTGGTaGACTCGGCCCTGGCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NNSTAHLHLSLNISKHRFTPPSW*TRPWPR Trigger: TCTTGGCCAGGGCCGAGTCAACCAGCTCGGAGGAGT...AAATCTGTGTTTTGAAATGTTAAGAGAAAGATGAAGGTGGGCGGTGCTGTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | AAAGAGACGAATGTAAACACCATCTCTGTAGAGAGCTTGATTCTCAGACATGGTGGTACCCCACCGTGGTaGGTCAGAAGTCCCATTACC | + |
|
Preference number: 5 (lower is better) Translates to: KETNVNTISVESLILRHGGTPPW*VRSPIT Trigger: GGTAATGGGACTTCTGACCAACCACGGTGGGGTACC...ACCATGTCTGAGAATCAAGCTCTCTACAGAGATGGTGTTTACATTCGTCTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | CATTTTTACAACACATCATTGTTGGTTGAGGCTGCAACACAAAGATACTATGTCTTGTGGCGGATATGGTaGGGCAGAGGCCTGCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HFYNTSLLVEAATQRYYVLWRIW*GRGLPL Trigger: CAACGGCAGGCCTCTGCCCAACCATATCCGCCACAA...GACATAGTATCTTTGTGTTGCAGCCTCAACCAACAATGATGTGTTGTAAAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | TCATATCGGTTTCCAGTGTGTCAAAATCAAGGATTTCTCCATTCCCAATTCACTTCTCCACGTCAGGCGTaGTCACCTGCTTGGGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SYRFPVCQNQGFLHSQFTSPRQA*SPAWVC Trigger: GCAAACCCAAGCAGGTGACAACGCCTGACGTGGAGA...AGTGAATTGGGAATGGAGAAATCCTTGATTTTGACACACTGGAAACCGATATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | ACACACTACCTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCATCTCCACGTCAGGCGTaGTCACCTGCTTGGGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: THYLIVLKSKGNVFVPTSSPRQA*SPAWVC Trigger: GCAAACCCAAGCAGGTGACAACGCCTGACGTGGAGA...TGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAGGTAGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | AACAAGCAGGATGTGAGTTGTTTGGCAACGAGCAAACATCACTGCACTCTACTAGCGTCCTTGAGCAATTaGTCTCTGATTTCCCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: NKQDVSCLATSKHHCTLLASLSN*SLISQL Trigger: TAGCTGGGAAATCAGAGACAAATTGCTCAAGGACGC...TAGTAGAGTGCAGTGATGTTTGCTCGTTGCCAAACAACTCACATCCTGCTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | CATTTTTACAACACATCATTGTTGGTTGAGGCTGCAACACAAAGATACTATGTCCATCTTGCACGGCGGTaGCTAAACCAGACCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: HFYNTSLLVEAATQRYYVHLARR*LNQTCT Trigger: AGTGCAGGTCTGGTTTAGCAACCGCCGTGCAAGATG...GACATAGTATCTTTGTGTTGCAGCCTCAACCAACAATGATGTGTTGTAAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | TCATATCGGTTTCCAGTGTGTCAAAATCAAGGATTTCTCCATTCCCAATTCACTCGAAGGAATAGTGCTTaGGTGTACAGTGCTCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SYRFPVCQNQGFLHSQFTRRNSA*VYSARR Trigger: CCTCCGAGCACTGTACACCAAAGCACTATTCCTTCG...AGTGAATTGGGAATGGAGAAATCCTTGATTTTGACACACTGGAAACCGATATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | CTAATGCTAGAGGTTATTTCATTTTGGCCAACCTCTGTGTTTTACCTACTGACATTGATTGGCTCCAGCTaGTTTCCTCCATCTTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: LMLEVISFWPTSVFYLLTLIGSS*FPPSCT Trigger: CGTGCAAGATGGAGGAAACAAGCTGGAGCCAATCAA...TGTCAGTAGGTAAAACACAGAGGTTGGCCAAAATGAAATAACCTCTAGCATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | CACCATCTCTGTAGAGAGCTTGATTCTCAGACATGGTCTCTGAACAAAAGGAACATAATGAAAGGCACTTaGTCCATACTGCCCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: HHLCRELDSQTWSLNKRNIMKGT*SILPIL Trigger: CAGTATGGGCAGTATGGACAAAGTGCCTTTCATTAT...GTTCCTTTTGTTCAGAGACCATGTCTGAGAATCAAGCTCTCTACAGAGATGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004994.16 |
||
| CDS-3UTR CAA 90 bp | CACTACCTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCATTCTTGATTGGCTCCAGCTaGTTTCCTCCATCTTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: HYLIVLKSKGNVFVPTSFLIGSS*FPPSCT Trigger: CGTGCAAGATGGAGGAAACAAGCTGGAGCCAATCAA...GAATGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAGGTAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | CATTTTTACAACACATCATTGTTGGTTGAGGCTGCAACACAAAGATACTATGTCCGTCCAAGGCTTACTTaGTCCATACTGCCCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: HFYNTSLLVEAATQRYYVRPRLT*SILPIL Trigger: CAGTATGGGCAGTATGGACAAAGTAAGCCTTGGACG...GACATAGTATCTTTGTGTTGCAGCCTCAACCAACAATGATGTGTTGTAAAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | AAAGAGACGAATGTAAACACCATCTCTGTAGAGAGCTTGATTCTCAGACATGGTCCCGGGTTCTCTCTTTaGTATTCCTCAATTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KETNVNTISVESLILRHGPGFSL*YSSIFF Trigger: GAAGAAAATTGAGGAATACAAAAGAGAGAACCCGGG...ACCATGTCTGAGAATCAAGCTCTCTACAGAGATGGTGTTTACATTCGTCTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | CATTTTTACAACACATCATTGTTGGTTGAGGCTGCAACACAAAGATACTATGTCGTTGAAAGCCATCAGTaGATTGGCTCCAGCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HFYNTSLLVEAATQRYYVVESHQ*IGSSLF Trigger: AAACAAGCTGGAGCCAATCAACTGATGGCTTTCAAC...GACATAGTATCTTTGTGTTGCAGCCTCAACCAACAATGATGTGTTGTAAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS-3UTR CAA 90 bp | CACTACCTCATTGTTCTTAAATCTAAAGGGAATGTATTTGTGCCTACCTCATTCCCCGGGTTCTCTCTTTaGTATTCCTCAATTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HYLIVLKSKGNVFVPTSFPGFSL*YSSIFF Trigger: GAAGAAAATTGAGGAATACAAAAGAGAGAACCCGGG...GAATGAGGTAGGCACAAATACATTCCCTTTAGATTTAAGAACAATGAGGTAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS CCA 72 bp | CGTGGGCTGGTAAGAGGTCTCCGACAGCTGGTATGTTaGCAGGGTCGGCATGGCGGTGGGAGGGAATCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RGLVRGLRQLVC*QGRHGGGRESP Trigger: GGGGGATTCCCTCCCACCGCCATGCCGACCCTGCCAACATACCAGCTGTCGGAGACCTCTTACCAGCCCACG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS CAA 72 bp | ACGTGGGCTGGTAAGAGGTCTCCGACAGCTGGTATGTaGGCAGGGTCGGCATGGCGGTGGGAGGGAATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TWAGKRSPTAGM*AGSAWRWEGIP Trigger: GGGGATTCCCTCCCACCGCCATGCCGACCCTGCCAACATACCAGCTGTCGGAGACCTCTTACCAGCCCACGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS CAA 90 bp | GAGGCAGTAGGCAGAGCTGCTGTCTGCGTTCGAAGGAATAGTGCTTaGGTGTACAGTGCTCGGAGGAAGCGGCTGAGGTCTGTGGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: EAVGRAAVCVRRNSA*VYSARRKRLRSVDG Trigger: ACCGTCCACAGACCTCAGCCGCTTCCTCCGAGCACTGTACACCAAAGCACTATTCCTTCGAACGCAGACAGCAGCTCTGCCTACTGCCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS CCA 72 bp | AGTCGGTCTGAGGCTGGTGCGGTACCCCACCGTGGTTaGTCAGAAGTCCCATTACCTGAGGTGAAAGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SRSEAGAVPHRG*SEVPLPEVKGH Trigger: ATGGCCTTTCACCTCAGGTAATGGGACTTCTGACCAACCACGGTGGGGTACCGCACCAGCCTCAGACCGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS CCA 72 bp | CCACATTCTTCATATGTTCCAGTCTCTGACTGCAGCTaGCTGACACCGTGGTCGTGGGTTCCAGGCCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PHSSYVPVSDCS*LTPWSWVPGPQ Trigger: CTGGGGGCCTGGAACCCACGACCACGGTGTCAGCCAGCTGCAGTCAGAGACTGGAACATATGAAGAATGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS TCA 72 bp | ATAGTGCTTTGGTGTACAGTGCTCGGAGGAAGCGGCTaGGGTCTGTGGACGGTGCTACTGGGATCTGACACG | + |
|
Preference number: 6 (lower is better) Translates to: IVLWCTVLGGSG*GLWTVLLGSDT Trigger: CGTGTCAGATCCCAGTAGCACCGTCCACAGACCTCAGCCGCTTCCTCCGAGCACTGTACACCAAAGCACTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS TCA 72 bp | ATTCTTCATATGTTCCAGTCTCTGACTGCAGCTGGCTaGCACCGTGGTCGTGGGTTCCAGGCCCCCAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ILHMFQSLTAAG*HRGRGFQAPSE Trigger: CTCACTGGGGGCCTGGAACCCACGACCACGGTGTCAGCCAGCTGCAGTCAGAGACTGGAACATATGAAGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS CAA 72 bp | GGCAGAGCTGCTGTCTGCGTTCGAAGGAATAGTGCTTaGGTGTACAGTGCTCGGAGGAAGCGGCTGAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GRAAVCVRRNSA*VYSARRKRLRS Trigger: AGACCTCAGCCGCTTCCTCCGAGCACTGTACACCAAAGCACTATTCCTTCGAACGCAGACAGCAGCTCTGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS TCA 72 bp | GGCAGACTGTCCACATTCTTCATATGTTCCAGTCTCTaGCTGCAGCTGGCTGACACCGTGGTCGTGGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GRLSTFFICSSL*LQLADTVVVGS Trigger: GGAACCCACGACCACGGTGTCAGCCAGCTGCAGTCAGAGACTGGAACATATGAAGAATGTGGACAGTCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS GCA 72 bp | GACTGTCCACATTCTTCATATGTTCCAGTCTCTGACTaGAGCTGGCTGACACCGTGGTCGTGGGTTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: DCPHSSYVPVSD*SWLTPWSWVPG Trigger: GCCTGGAACCCACGACCACGGTGTCAGCCAGCTGCAGTCAGAGACTGGAACATATGAAGAATGTGGACAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS GCA 72 bp | CAAAGCTGTCTGTATAGCTTGAAAATCCATGCCTGGTaGTGGGGAGGCAGTAGGCAGAGCTGCTGTCTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: QSCLYSLKIHAW*WGGSRQSCCLR Trigger: ACGCAGACAGCAGCTCTGCCTACTGCCTCCCCAGCACCAGGCATGGATTTTCAAGCTATACAGACAGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||
| CDS TCA 72 bp | GCTTACTTTGTCCATACTGCCCATACTGGTAGCCTGTaGCAGGGTCCATACTGTAGCCTGCGGTGCTATAGG | + |
|
Preference number: 6 (lower is better) Translates to: AYFVHTAHTGSL*QGPYCSLRCYR Trigger: CCTATAGCACCGCAGGCTACAGTATGGACCCTGTCACAGGCTACCAGTATGGGCAGTATGGACAAAGTAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087086.7 |
||
| CDS CAA 72 bp | GAGATGGTTGAAAGCCATCAGTTGATTGGCTCCAGCTaGTTTCCTCCATCTTGCACGGCGGTTGCTAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: EMVESHQLIGSS*FPPSCTAVAKP Trigger: TGGTTTAGCAACCGCCGTGCAAGATGGAGGAAACAAGCTGGAGCCAATCAACTGATGGCTTTCAACCATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004994.16 ENSMUST00000087086.7 |
||