Pregenerated sensors for PAX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004231Ensembl transcript IDs: ENSMUST00000004340.11, ENSMUST00000173346.4, ENSMUST00000174490.9
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGACTCCCGGGCGTCCGAAGTGGGCTGCCCCTGGGTGGGCCACGCTaGTTGTGTGTCACAGAAACGGCGCGCGGGCCAGAGGCGGGCGGG | + |
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Preference number: 1 (lower is better) Translates to: RLPGVRSGLPLGGPR*LCVTETARGPEAGG Trigger: CCCGCCCGCCTCTGGCCCGCGCGCCGTTTCTGTGACACACAATCAGCGTGGCCCACCCAGGGGCAGCCCACTTCGGACGCCCGGGAGTCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR CCA 90 bp | GGGCTTGGGGGAGGATGTCTCGAGGTGGGGGTGGGACAGGGACGGTaGCCGAGAGGCAGCGCGTCGCTTCGGTCCTCCCTCCCTCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: GLGGGCLEVGVGQGR*PRGSASLRSSLPLG Trigger: CCCCAGAGGGAGGGAGGACCGAAGCGACGCGCTGCCTCTCGGCCACCGTCCCTGTCCCACCCCCACCTCGAGACATCCTCCCCCAAGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR CCA 90 bp | GACGGTGGCCGAGAGGCAGCGCGTCGCTTCGGTCCTCCCTCCCTCTaGGGTGGGCGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: DGGREAARRFGPPSL*GGRSDGDDVEAEAV Trigger: GACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCGCCCACCCCAGAGGGAGGGAGGACCGAAGCGACGCGCTGCCTCTCGGCCACCGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR CCA 90 bp | CCAGCGAAGCCTCCCGACTCCCGGGCGTCCGAAGTGGGCTGCCCCTaGGTGGGCCACGCTGATTGTGTGTCACAGAAACGGCGCGCGGGC | + |
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Preference number: 1 (lower is better) Translates to: PAKPPDSRASEVGCP*VGHADCVSQKRRAG Trigger: GCCCGCGCGCCGTTTCTGTGACACACAATCAGCGTGGCCCACCCAGGGGCAGCCCACTTCGGACGCCCGGGAGTCGGGAGGCTTCGCTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR CCA 90 bp | TGGCCGAGAGGCAGCGCGTCGCTTCGGTCCTCCCTCCCTCTGGGGTaGGCGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: WPRGSASLRSSLPLG*AVRRGRCGGRSCLP Trigger: AGGCAGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCGCCCACCCCAGAGGGAGGGAGGACCGAAGCGACGCGCTGCCTCTCGGCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR CCA 90 bp | CGAAGCCTCCCGACTCCCGGGCGTCCGAAGTGGGCTGCCCCTGGGTaGGCCACGCTGATTGTGTGTCACAGAAACGGCGCGCGGGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: RSLPTPGRPKWAAPG*ATLIVCHRNGARAR Trigger: TCTGGCCCGCGCGCCGTTTCTGTGACACACAATCAGCGTGGCCCACCCAGGGGCAGCCCACTTCGGACGCCCGGGAGTCGGGAGGCTTCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR CCA 90 bp | TGCAGGGAGCATCGCCGCTACCGAGAGAGCAACTACAGGGTGGGGTaGGGCAGGGTGGCCTGGTCGGGCACGTGGGGCATGGCCACAAGG | + |
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Preference number: 1 (lower is better) Translates to: CREHRRYRESNYRVG*GRVAWSGTWGMATR Trigger: CCTTGTGGCCATGCCCCACGTGCCCGACCAGGCCACCCTGCCCCACCCCACCCTGTAGTTGCTCTCTCGGTAGCGGCGATGCTCCCTGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR TCA 90 bp | CAGCGCATTACTGATGGGAAAAGATCAATGCTCGCAGCCGCAGCCTaGGGACACGGTTCCCGCGGTGGCCCCGACGTGGCTGCGTGCTTG | + |
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Preference number: 1 (lower is better) Translates to: QRITDGKRSMLAAAA*GHGSRGGPDVAACL Trigger: CAAGCACGCAGCCACGTCGGGGCCACCGCGGGAACCGTGTCCTCAGGCTGCGGCTGCGAGCATTGATCTTTTCCCATCAGTAATGCGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR GCA 90 bp | TGTTTCTGTTATTTCGGGTCGTCACGATCCACGGTTGAGGAGACATaGAGGGAGCATCGCCGCTACCGAGAGAGCAACTACAGGGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: CFCYFGSSRSTVEET*REHRRYRESNYRVG Trigger: CCCCACCCTGTAGTTGCTCTCTCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAACCGTGGATCGTGACGACCCGAAATAACAGAAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR TCA 90 bp | TTATTTACTTTGTTTCTGTTATTTCGGGTCGTCACGATCCACGGTTaGGGAGACATGCAGGGAGCATCGCCGCTACCGAGAGAGCAACTA | + |
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Preference number: 1 (lower is better) Translates to: LFTLFLLFRVVTIHG*GDMQGASPLPREQL Trigger: TAGTTGCTCTCTCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAACCGTGGATCGTGACGACCCGAAATAACAGAAACAAAGTAAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCCTCCCGACTCCCGGGCGTCCGAAGTGGGCTGCCCCTGGGTGGGCCACGCTGAGGATGTCTCGAGGTaGGGGTGGGACAGGGACGGT | + |
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Preference number: 2 (lower is better) Translates to: KPPDSRASEVGCPWVGHAEDVSR*GWDRDG Trigger: ACCGTCCCTGTCCCACCCCCACCTCGAGACATCCTC...AGCGTGGCCCACCCAGGGGCAGCCCACTTCGGACGCCCGGGAGTCGGGAGGCTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR CCA 90 bp | GATTGTGTGTCACAGAAACGGCGCGCGGGCCAGAGGCGGGCGGGCTTCCGGACGGAGGATGTCTCGAGGTaGGGGTGGGACAGGGACGGT | + |
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Preference number: 2 (lower is better) Translates to: DCVSQKRRAGQRRAGFRTEDVSR*GWDRDG Trigger: ACCGTCCCTGTCCCACCCCCACCTCGAGACATCCTC...CGTCCGGAAGCCCGCCCGCCTCTGGCCCGCGCGCCGTTTCTGTGACACACAATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTCGTCACGATCCACGGTTGAGGAGACATGCAGGGAGCATCGCCGCTACCGATGGGGCAGGGTGGCCTaGTCGGGCACGTGGGGCATG | + |
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Preference number: 2 (lower is better) Translates to: GSSRSTVEETCREHRRYRWGRVA*SGTWGM Trigger: CATGCCCCACGTGCCCGACCAGGCCACCCTGCCCCA...TCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAACCGTGGATCGTGACGACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTCGTCACGATCCACGGTTGAGGAGACATGCAGGGAGCATCGCCGCTACCGATCCCTCCCTCTGGGGTaGGCGGTCAGACGGGGACGA | + |
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Preference number: 2 (lower is better) Translates to: GSSRSTVEETCREHRRYRSLPLG*AVRRGR Trigger: TCGTCCCCGTCTGACCGCCCACCCCAGAGGGAGGGA...TCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAACCGTGGATCGTGACGACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGGAGACATGCAGGGAGCATCGCCGCTACCGAGAGAGCAACTACAGGGTGGGTCCTCCCTCCCTCTaGGGTGGGCGGTCAGACGGG | + |
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Preference number: 2 (lower is better) Translates to: VEETCREHRRYRESNYRVGPPSL*GGRSDG Trigger: CCCGTCTGACCGCCCACCCCAGAGGGAGGGAGGACC...CACCCTGTAGTTGCTCTCTCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR GCA 90 bp | CGGGCGTCCGAAGTGGGCTGCCCCTGGGTGGGCCACGCTGATTGTGTGTCACAGGAGGCCGAAGCTGTCTaGCTGAAGCTTGATGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: RASEVGCPWVGHADCVSQEAEAV*LKLDVV Trigger: GACCACATCAAGCTTCAGGCAGACAGCTTCGGCCTC...CTGTGACACACAATCAGCGTGGCCCACCCAGGGGCAGCCCACTTCGGACGCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTCGTCACGATCCACGGTTGAGGAGACATGCAGGGAGCATCGCCGCTACCGACAGACGGGGACGATGTaGAGGCCGAAGCTGTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GSSRSTVEETCREHRRYRQTGTM*RPKLSA Trigger: GGCAGACAGCTTCGGCCTCCACATCGTCCCCGTCTG...TCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAACCGTGGATCGTGACGACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTCTCCCCGGCGGCTCCTCCTTCAGCACAAAGTCCTTTCCTTAGCTTCCCTTTCCCTCCCTCTGGGGTaGGCGGTCAGACGGGGACGA | + |
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Preference number: 2 (lower is better) Translates to: GSPRRLLLQHKVLSLASLSLPLG*AVRRGR Trigger: TCGTCCCCGTCTGACCGCCCACCCCAGAGGGAGGGA...AAGGGAAGCTAAGGAAAGGACTTTGTGCTGAAGGAGGAGCCGCCGGGGAGACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR TCA 90 bp | GTCAGTTCCTTCCAGGCTTTTTGCGCCCGCAGGTTGGGAGTTTGGGATGGGAGGCCGAAGCTGTCTGCCTaGAGCTTGATGTGGTCCCCG | + |
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Preference number: 2 (lower is better) Translates to: VSSFQAFCARRLGVWDGRPKLSA*SLMWSP Trigger: CGGGGACCACATCAAGCTTCAGGCAGACAGCTTCGG...CCTCCCATCCCAAACTCCCAACCTGCGGGCGCAAAAAGCCTGGAAGGAACTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR GCA 90 bp | GTCAGTTCCTTCCAGGCTTTTTGCGCCCGCAGGTTGGGAGTTTGGGATGGGAGGGAGGCCGAAGCTGTCTaGCTGAAGCTTGATGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: VSSFQAFCARRLGVWDGREAEAV*LKLDVV Trigger: GACCACATCAAGCTTCAGGCAGACAGCTTCGGCCTC...CCTCCCATCCCAAACTCCCAACCTGCGGGCGCAAAAAGCCTGGAAGGAACTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR GCA 90 bp | GAAACAGTCAACAAAACAGGCGAGAGGTGTCCACGGGACCATGTTCGTCATTTTGCGTCCGAAGTGGGCTaGCCCTGGGTGGGCCACGCT | + |
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Preference number: 2 (lower is better) Translates to: ETVNKTGERCPRDHVRHFASEVG*PWVGHA Trigger: AGCGTGGCCCACCCAGGGGCAGCCCACTTCGGACGC...AAAATGACGAACATGGTCCCGTGGACACCTCTCGCCTGTTTTGTTGACTGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR CCA 90 bp | TATGTACAGAGAGAGGTTCGCCTCGACAGCACACACCGTCTTTCTATAAAGCAGGGTCCTCCCTCCCTCTaGGGTGGGCGGTCAGACGGG | + |
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Preference number: 2 (lower is better) Translates to: YVQREVRLDSTHRLSIKQGPPSL*GGRSDG Trigger: CCCGTCTGACCGCCCACCCCAGAGGGAGGGAGGACC...CTGCTTTATAGAAAGACGGTGTGTGCTGTCGAGGCGAACCTCTCTCTGTACATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTCGTCACGATCCACGGTTGAGGAGACATGCAGGGAGCATCGCCGCTACCGAAAAAGGGAGATGAAGTaGGAGAGATGCAGGGCGATG | + |
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Preference number: 2 (lower is better) Translates to: GSSRSTVEETCREHRRYRKREMK*ERCRAM Trigger: CATCGCCCTGCATCTCTCCCACTTCATCTCCCTTTT...TCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAACCGTGGATCGTGACGACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR CCA 90 bp | CAAGGGGCCAAGCCCCGAGGTTGGTTCTGCCATCTTAGATGTAGCCTTGGAGGCAAAAGGGAGATGAAGTaGGAGAGATGCAGGGCGATG | + |
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Preference number: 2 (lower is better) Translates to: QGAKPRGWFCHLRCSLGGKREMK*ERCRAM Trigger: CATCGCCCTGCATCTCTCCCACTTCATCTCCCTTTT...GCCTCCAAGGCTACATCTAAGATGGCAGAACCAACCTCGGGGCTTGGCCCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR TCA 90 bp | AAGTGGGAGAGATGCAGGGCGATGAACACGGAATTACAGAGAAACAGTCAACAAAGGTGGAAGAGGCGCTaGCGTAAGGGCAAGGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: KWERCRAMNTELQRNSQQRWKRR*RKGKAG Trigger: CCCCGCCTTGCCCTTACGTCAGCGCCTCTTCCACCT...TTGTTGACTGTTTCTCTGTAATTCCGTGTTCATCGCCCTGCATCTCTCCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR TCA 90 bp | TATGTACAGAGAGAGGTTCGCCTCGACAGCACACACCGTCTTTCTATAAAGCAGCAAGGTGTCGTGGGATaGGCCGAGGAAGCACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: YVQREVRLDSTHRLSIKQQGVVG*AEEAQE Trigger: CTCCTGTGCTTCCTCGGCTCATCCCACGACACCTTG...CTGCTTTATAGAAAGACGGTGTGTGCTGTCGAGGCGAACCTCTCTCTGTACATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCGATGAACACGGAATTACAGAGAAACAGTCAACAAAACAGGCGAGAGGTCCCTCCCCCAGGACGTaGTGTGCTTTAGTGGGCATG | + |
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Preference number: 2 (lower is better) Translates to: QGDEHGITEKQSTKQARGPSPRT*CALVGM Trigger: CATGCCCACTAAAGCACAGCACGTCCTGGGGGAGGG...ACCTCTCGCCTGTTTTGTTGACTGTTTCTCTGTAATTCCGTGTTCATCGCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR CCA 90 bp | TATGTACAGAGAGAGGTTCGCCTCGACAGCACACACCGTCTTTCTATAAAGCAGTTTGGGATGGGAGGGTaGGGGTGGGCAGCGCATTAC | + |
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Preference number: 2 (lower is better) Translates to: YVQREVRLDSTHRLSIKQFGMGG*GWAAHY Trigger: GTAATGCGCTGCCCACCCCCACCCTCCCATCCCAAA...CTGCTTTATAGAAAGACGGTGTGTGCTGTCGAGGCGAACCTCTCTCTGTACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR TCA 90 bp | TATGTACAGAGAGAGGTTCGCCTCGACAGCACACACCGTCTTTCTATAAAGCAGCTGGGTGGGCCACGCTaGTTGTGTGTCACAGAAACG | + |
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Preference number: 2 (lower is better) Translates to: YVQREVRLDSTHRLSIKQLGGPR*LCVTET Trigger: CGTTTCTGTGACACACAATCAGCGTGGCCCACCCAG...CTGCTTTATAGAAAGACGGTGTGTGCTGTCGAGGCGAACCTCTCTCTGTACATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR CAA 90 bp | TTTATTTACTTTGTTTCTGTTATTTCGGGTCGTCACGATCCACGGTaGAGGAGACATGCAGGGAGCATCGCCGCTACCGAGAGAGCAACT | + |
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Preference number: 2 (lower is better) Translates to: FIYFVSVISGRHDPR*RRHAGSIAATERAT Trigger: AGTTGCTCTCTCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAACCGTGGATCGTGACGACCCGAAATAACAGAAACAAAGTAAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR GCA 90 bp | AAGTGGGAGAGATGCAGGGCGATGAACACGGAATTACAGAGAAACAGTCAACAATTCCTTAGCTTCCCTTaGTCAGCTTCTCCAGCGAAG | + |
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Preference number: 2 (lower is better) Translates to: KWERCRAMNTELQRNSQQFLSFP*SASPAK Trigger: CTTCGCTGGAGAAGCTGAGCAAGGGAAGCTAAGGAA...TTGTTGACTGTTTCTCTGTAATTCCGTGTTCATCGCCCTGCATCTCTCCCACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR CCA 72 bp | GGCAGCGCGTCGCTTCGGTCCTCCCTCCCTCTGGGGTaGGCGGTCAGACGGGGACGATGTGGAGGCCGAAGC | + |
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Preference number: 3 (lower is better) Translates to: GSASLRSSLPLG*AVRRGRCGGRS Trigger: GCTTCGGCCTCCACATCGTCCCCGTCTGACCGCCCACCCCAGAGGGAGGGAGGACCGAAGCGACGCGCTGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR CCA 72 bp | CGAGAGGCAGCGCGTCGCTTCGGTCCTCCCTCCCTCTaGGGTGGGCGGTCAGACGGGGACGATGTGGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: REAARRFGPPSL*GGRSDGDDVEA Trigger: GGCCTCCACATCGTCCCCGTCTGACCGCCCACCCCAGAGGGAGGGAGGACCGAAGCGACGCGCTGCCTCTCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR TCA 72 bp | GGCGTCCGAAGTGGGCTGCCCCTGGGTGGGCCACGCTaGTTGTGTGTCACAGAAACGGCGCGCGGGCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: GVRSGLPLGGPR*LCVTETARGPE Trigger: CTCTGGCCCGCGCGCCGTTTCTGTGACACACAATCAGCGTGGCCCACCCAGGGGCAGCCCACTTCGGACGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR GCA 72 bp | GCGAAGCCTCCCGACTCCCGGGCGTCCGAAGTGGGCTaGCCCTGGGTGGGCCACGCTGATTGTGTGTCACAG | + |
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Preference number: 3 (lower is better) Translates to: AKPPDSRASEVG*PWVGHADCVSQ Trigger: CTGTGACACACAATCAGCGTGGCCCACCCAGGGGCAGCCCACTTCGGACGCCCGGGAGTCGGGAGGCTTCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR GCA 72 bp | AAACGCTGTCCCTCGAGTCCGACCCTTGCGTCCCAGTaGCACCGTCTGGGGCGGGGCGCAGACAGAAGGCGG | + |
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Preference number: 3 (lower is better) Translates to: KRCPSSPTLASQ*HRLGRGADRRR Trigger: CCGCCTTCTGTCTGCGCCCCGCCCCAGACGGTGGCACTGGGACGCAAGGGTCGGACTCGAGGGACAGCGTTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR CCA 72 bp | CCGACTCCCGGGCGTCCGAAGTGGGCTGCCCCTGGGTaGGCCACGCTGATTGTGTGTCACAGAAACGGCGCG | + |
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Preference number: 3 (lower is better) Translates to: PTPGRPKWAAPG*ATLIVCHRNGA Trigger: CGCGCCGTTTCTGTGACACACAATCAGCGTGGCCCACCCAGGGGCAGCCCACTTCGGACGCCCGGGAGTCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR CCA 72 bp | CCTCCCGACTCCCGGGCGTCCGAAGTGGGCTGCCCCTaGGTGGGCCACGCTGATTGTGTGTCACAGAAACGG | + |
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Preference number: 3 (lower is better) Translates to: PPDSRASEVGCP*VGHADCVSQKR Trigger: CCGTTTCTGTGACACACAATCAGCGTGGCCCACCCAGGGGCAGCCCACTTCGGACGCCCGGGAGTCGGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR GCA 72 bp | GGACACGGTTCCCGCGGTGGCCCCGACGTGGCTGCGTaGTTGGGACCAAACACAAGGTGTCGTGGGATGAGC | + |
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Preference number: 3 (lower is better) Translates to: GHGSRGGPDVAA*LGPNTRCRGMS Trigger: GCTCATCCCACGACACCTTGTGTTTGGTCCCAAGCACGCAGCCACGTCGGGGCCACCGCGGGAACCGTGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR GCA 72 bp | CTGAGGACACGGTTCCCGCGGTGGCCCCGACGTGGCTaGGTGCTTGGGACCAAACACAAGGTGTCGTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: LRTRFPRWPRRG*VLGTKHKVSWD Trigger: ATCCCACGACACCTTGTGTTTGGTCCCAAGCACGCAGCCACGTCGGGGCCACCGCGGGAACCGTGTCCTCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR TCA 72 bp | ACTGATGGGAAAAGATCAATGCTCGCAGCCGCAGCCTaGGGACACGGTTCCCGCGGTGGCCCCGACGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: TDGKRSMLAAAA*GHGSRGGPDVA Trigger: AGCCACGTCGGGGCCACCGCGGGAACCGTGTCCTCAGGCTGCGGCTGCGAGCATTGATCTTTTCCCATCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR CAA 90 bp | GGGTCTCCCCGGCGGCTCCTCCTTCAGCACAAAGTCCTTTCCTTAGCTTCCCTTGAAGGGCTGCGGGGCTaGGGGGAGGATGTCTCGAGG | + |
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Preference number: 3 (lower is better) Translates to: GSPRRLLLQHKVLSLASLEGLRG*GEDVSR Trigger: CCTCGAGACATCCTCCCCCAAGCCCCGCAGCCCTTC...AAGGGAAGCTAAGGAAAGGACTTTGTGCTGAAGGAGGAGCCGCCGGGGAGACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR-3UTR CAA 90 bp | GTACAGAGAGAGGTTCGCCTCGACAGCACACACCGTCTTTCTATAAAGCAGCCTGAAGGGCTGCGGGGCTaGGGGGAGGATGTCTCGAGG | + |
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Preference number: 3 (lower is better) Translates to: VQREVRLDSTHRLSIKQPEGLRG*GEDVSR Trigger: CCTCGAGACATCCTCCCCCAAGCCCCGCAGCCCTTC...AGGCTGCTTTATAGAAAGACGGTGTGTGCTGTCGAGGCGAACCTCTCTCTGTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR TCA 72 bp | CTGCGTGCTTGGGACCAAACACAAGGTGTCGTGGGATaGGCCGAGGAAGCACAGGAGGGAAAAGTGAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: LRAWDQTQGVVG*AEEAQEGKVRG Trigger: GCCTCTCACTTTTCCCTCCTGTGCTTCCTCGGCTCATCCCACGACACCTTGTGTTTGGTCCCAAGCACGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| 3UTR GCA 72 bp | TATTTCGGGTCGTCACGATCCACGGTTGAGGAGACATaGAGGGAGCATCGCCGCTACCGAGAGAGCAACTAC | + |
|
Preference number: 3 (lower is better) Translates to: YFGSSRSTVEET*REHRRYRESNY Trigger: GTAGTTGCTCTCTCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAACCGTGGATCGTGACGACCCGAAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| 3UTR-3UTR CAA 90 bp | GTACAGAGAGAGGTTCGCCTCGACAGCACACACCGTCTTTCTATAAAGCAGCCTTGGCGTCTGCTCGCCTaGGGTACCAGCCTTGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VQREVRLDSTHRLSIKQPWRLLA*GTSLGK Trigger: TTTTCCAAGGCTGGTACCCAAGGCGAGCAGACGCCA...AGGCTGCTTTATAGAAAGACGGTGTGTGCTGTCGAGGCGAACCTCTCTCTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| 3UTR TCA 72 bp | TTGTTTCTGTTATTTCGGGTCGTCACGATCCACGGTTaGGGAGACATGCAGGGAGCATCGCCGCTACCGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LFLLFRVVTIHG*GDMQGASPLPR Trigger: TCTCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAACCGTGGATCGTGACGACCCGAAATAACAGAAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCGTCACGATCCACGGTTGAGGAGACATGCAGGGAGCATCGCCGCTACCGACTGTTGGGTTTTTGTTaGTTCATTTTTGCAAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: GSSRSTVEETCREHRRYRLLGFC*FIFAKT Trigger: GGTCTTTGCAAAAATGAACAAACAAAAACCCAACAG...TCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAACCGTGGATCGTGACGACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | GATTGTGTGTCACAGAAACGGCGCGCGGGCCAGAGGCGGGCGGGCTTCCGGACGGGGCCAGCTCCACGATaGGCTGCCTCACCACGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: DCVSQKRRAGQRRAGFRTGPAPR*AASPRR Trigger: CCGACGTGGTGAGGCAGCGCATCGTGGAGCTGGCCC...CGTCCGGAAGCCCGCCCGCCTCTGGCCCGCGCGCCGTTTCTGTGACACACAATC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | TGTCACAGAAACGGCGCGCGGGCCAGAGGCGGGCGGGCTTCCGGACGGCGCCGCGCGGTGTACTGGGGATaGCTGTATGGGTTGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CHRNGARARGGRASGRRRAVYWG*LYGLPE Trigger: CTCAGGCAACCCATACAGCCATCCCCAGTACACCGC...GCGGCGCCGTCCGGAAGCCCGCCCGCCTCTGGCCCGCGCGCCGTTTCTGTGACA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | CGGGCGTCCGAAGTGGGCTGCCCCTGGGTGGGCCACGCTGATTGTGTGTCACAGGAGGGGAGGCCGTGCTaGGAACGATGGTGTGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RASEVGCPWVGHADCVSQEGRPC*ERWCGR Trigger: CCGGCCACACCATCGTTCCCAGCACGGCCTCCCCTC...CTGTGACACACAATCAGCGTGGCCCACCCAGGGGCAGCCCACTTCGGACGCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR TCA 90 bp | CGGGCGTCCGAAGTGGGCTGCCCCTGGGTGGGCCACGCTGATTGTGTGTCACAGCCAGCTGCTGCTGGGTaGAGGTGTCGGCTCGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RASEVGCPWVGHADCVSQPAAAG*RCRLAG Trigger: ACCTGCGAGCCGACACCTTCACCCAGCAGCAGCTGG...CTGTGACACACAATCAGCGTGGCCCACCCAGGGGCAGCCCACTTCGGACGCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | CCGCGGCTCCACCTGTCCTGTCTGGCCATCGACAGGGTGATGAGAAGGGCTGCGGAGGGGAGGCCGTGCTaGGAACGATGGTGTGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PRLHLSCLAIDRVMRRAAEGRPC*ERWCGR Trigger: CCGGCCACACCATCGTTCCCAGCACGGCCTCCCCTC...CGCAGCCCTTCTCATCACCCTGTCGATGGCCAGACAGGACAGGTGGAGCCGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | GATTGTGTGTCACAGAAACGGCGCGCGGGCCAGAGGCGGGCGGGCTTCCGGACGGCTTCCAGCTGCTGCTaGGTGAAGGTGTCGGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: DCVSQKRRAGQRRAGFRTASSCC*VKVSAR Trigger: GCGAGCCGACACCTTCACCCAGCAGCAGCTGGAAGC...CGTCCGGAAGCCCGCCCGCCTCTGGCCCGCGCGCCGTTTCTGTGACACACAATC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGCGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCTGCCTGAAGCTACACCCCCGTGCCGGTaGATCGCGGAGAAGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GWAVRRGRCGGRSCLPEATPPCR*IAEKGS Trigger: AGACCCCTTCTCCGCGATGCACCGGCACGGGGGTGT...AGCTTCAGGCAGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCGCCCACCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004340.11 |
||
| CDS-3UTR GCA 90 bp | CCTCCCTCCCTCTGGGGTGGGCGGTCAGACGGGGACGATGTGGAGGCCGAAGCTTGCCTGACACATTGCTaGCCAGCTCAGGGTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PPSLWGGRSDGDDVEAEACLTHC*PAQGWP Trigger: CGGCCAACCCTGAGCTGGGCAGCAATGTGTCAGGCA...AGCTTCGGCCTCCACATCGTCCCCGTCTGACCGCCCACCCCAGAGGGAGGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| 3UTR CAA 72 bp | CACGGTTCCCGCGGTGGCCCCGACGTGGCTGCGTGCTaGGGACCAAACACAAGGTGTCGTGGGATGAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HGSRGGPDVAAC*GPNTRCRGMSR Trigger: TCGGCTCATCCCACGACACCTTGTGTTTGGTCCCAAGCACGCAGCCACGTCGGGGCCACCGCGGGAACCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGCGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCTGCCTGAAGCTAGCTCCACGATGCGCTaGCTCACCACGTCGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GWAVRRGRCGGRSCLPEASSTMR*LTTSGR Trigger: CCTACCCGACGTGGTGAGGCAGCGCATCGTGGAGCT...AGCTTCAGGCAGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCGCCCACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | GGGTCGTCACGATCCACGGTTGAGGAGACATGCAGGGAGCATCGCCGCTACCGAGGGCCAGCTCCACGATaGGCTGCCTCACCACGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GSSRSTVEETCREHRRYRGPAPR*AASPRR Trigger: CCGACGTGGTGAGGCAGCGCATCGTGGAGCTGGCCC...TCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAACCGTGGATCGTGACGACCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTCCCTCTGGGGTGGGCGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGCGGTGTACTGGGGATaGCTGTATGGGTTGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPSLWGGRSDGDDVEAEAAVYWG*LYGLPE Trigger: CTCAGGCAACCCATACAGCCATCCCCAGTACACCGC...AGCTTCGGCCTCCACATCGTCCCCGTCTGACCGCCCACCCCAGAGGGAGGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | CCGCGGCTCCACCTGTCCTGTCTGGCCATCGACAGGGTGATGAGAAGGGCTGCGTGCCTGACACATTGCTaGCCAGCTCAGGGTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PRLHLSCLAIDRVMRRAACLTHC*PAQGWP Trigger: CGGCCAACCCTGAGCTGGGCAGCAATGTGTCAGGCA...CGCAGCCCTTCTCATCACCCTGTCGATGGCCAGACAGGACAGGTGGAGCCGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | GATTGTGTGTCACAGAAACGGCGCGCGGGCCAGAGGCGGGCGGGCTTCCGGACGGATGGCTGTATGGGTTaGCTGAGAACTCGCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DCVSQKRRAGQRRAGFRTDGCMG*LRTRSQ Trigger: CTGGGAGCGAGTTCTCAGGCAACCCATACAGCCATC...CGTCCGGAAGCCCGCCCGCCTCTGGCCCGCGCGCCGTTTCTGTGACACACAATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR TCA 90 bp | GCCAAGCCCCGAGGTTGGTTCTGCCATCTTAGATGTAGCCTTGGAGGCCTGGGGCCAGCTGCTGCTGGGTaGAGGTGTCGGCTCGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AKPRGWFCHLRCSLGGLGPAAAG*RCRLAG Trigger: ACCTGCGAGCCGACACCTTCACCCAGCAGCAGCTGG...CCCCAGGCCTCCAAGGCTACATCTAAGATGGCAGAACCAACCTCGGGGCTTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | GGGTCGTCACGATCCACGGTTGAGGAGACATGCAGGGAGCATCGCCGCTACCGAAGTCACTCCTGTCCCTaGCCCATCCGGCGTTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSSRSTVEETCREHRRYRSHSCP*PIRRWV Trigger: CACCCAACGCCGGATGGGGCAGGGACAGGAGTGACT...TCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAACCGTGGATCGTGACGACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | GGGTCTCCCCGGCGGCTCCTCCTTCAGCACAAAGTCCTTTCCTTAGCTTCCCTTCACACCCCCGTGCCCTaGGTGCATCGCGGAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSPRRLLLQHKVLSLASLHTPVP*VHRGEG Trigger: CCCTTCTCCGCGATGCACCCAGGGCACGGGGGTGTG...AAGGGAAGCTAAGGAAAGGACTTTGTGCTGAAGGAGGAGCCGCCGGGGAGACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | CGGGCGTCCGAAGTGGGCTGCCCCTGGGTGGGCCACGCTGATTGTGTGTCACAGCGCGGAGAAGGGGTCTaGTTTGCAGTGCATATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RASEVGCPWVGHADCVSQRGEGV*FAVHIH Trigger: ATGGATATGCACTGCAAAGCAGACCCCTTCTCCGCG...CTGTGACACACAATCAGCGTGGCCCACCCAGGGGCAGCCCACTTCGGACGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | CGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCTGCCTGAAGCTTGATGTGGCTTCCAGCTGCTGCTaGGTGAAGGTGTCGGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RSDGDDVEAEAVCLKLDVASSCC*VKVSAR Trigger: GCGAGCCGACACCTTCACCCAGCAGCAGCTGGAAGC...CACATCAAGCTTCAGGCAGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR TCA 90 bp | CGGGCGTCCGAAGTGGGCTGCCCCTGGGTGGGCCACGCTGATTGTGTGTCACAGGATCCTGTTGATGGATaGGACACTGGGAACTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RASEVGCPWVGHADCVSQDPVDG*DTGNCV Trigger: GACACAGTTCCCAGTGTCTCATCCATCAACAGGATC...CTGTGACACACAATCAGCGTGGCCCACCCAGGGGCAGCCCACTTCGGACGCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR TCA 90 bp | GGGTGGGCGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCTGCCTGAAGCTCAGATAGACTGGACTTaGCTTCATCAAGCCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GWAVRRGRCGGRSCLPEAQIDWT*LHQAQG Trigger: CCCCTGGGCTTGATGAAGTCAAGTCCAGTCTATCTG...AGCTTCAGGCAGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCGCCCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR TCA 90 bp | CCGCGGCTCCACCTGTCCTGTCTGGCCATCGACAGGGTGATGAGAAGGGCTGCGCAGATAGACTGGACTTaGCTTCATCAAGCCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRLHLSCLAIDRVMRRAAQIDWT*LHQAQG Trigger: CCCCTGGGCTTGATGAAGTCAAGTCCAGTCTATCTG...CGCAGCCCTTCTCATCACCCTGTCGATGGCCAGACAGGACAGGTGGAGCCGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | CGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCTGCCTGAAGCTTGATGTGTGCCCCATCCGGCGTTaGGTGGAAAGGCTGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSDGDDVEAEAVCLKLDVCPIRR*VERLLN Trigger: GTTCAGCAGCCTTTCCACCCAACGCCGGATGGGGCA...CACATCAAGCTTCAGGCAGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR TCA 90 bp | CCGCGGCTCCACCTGTCCTGTCTGGCCATCGACAGGGTGATGAGAAGGGCTGCGTCCCCTGTTCTGATTTaGTGTGCTCTGATGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRLHLSCLAIDRVMRRAASPVLI*CALMPG Trigger: TCCAGGCATCAGAGCACATCAAATCAGAACAGGGGA...CGCAGCCCTTCTCATCACCCTGTCGATGGCCAGACAGGACAGGTGGAGCCGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR TCA 90 bp | GGGTGGGCGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCTGCCTGAAGCTTCCCCTGTTCTGATTTaGTGTGCTCTGATGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GWAVRRGRCGGRSCLPEASPVLI*CALMPG Trigger: TCCAGGCATCAGAGCACATCAAATCAGAACAGGGGA...AGCTTCAGGCAGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCGCCCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR TCA 90 bp | CAAGGGGCCAAGCCCCGAGGTTGGTTCTGCCATCTTAGATGTAGCCTTGGAGGCGCTGTATGGGTTGCCTaGGAACTCGCTCCCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGAKPRGWFCHLRCSLGGAVWVA*ELAPRH Trigger: GTGCCTGGGAGCGAGTTCTCAGGCAACCCATACAGC...GCCTCCAAGGCTACATCTAAGATGGCAGAACCAACCTCGGGGCTTGGCCCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | GTCTCGAGGTGGGGGTGGGACAGGGACGGTGGCCGAGAGGCAGCGCGTCGCTTCTGTTCTGATTTGATGTaGTCTGATGCCTGGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VSRWGWDRDGGREAARRFCSDLM*SDAWKT Trigger: TGTCTTCCAGGCATCAGAGCACATCAAATCAGAACA...GAAGCGACGCGCTGCCTCTCGGCCACCGTCCCTGTCCCACCCCCACCTCGAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | CGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCTGCCTGAAGCTTGATGTGTTGCCACCTTGGGCTTaGAGCCACCAATCACTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RSDGDDVEAEAVCLKLDVLPPWA*SHQSLR Trigger: CCGGAGTGATTGGTGGCTCCAAGCCCAAGGTGGCAA...CACATCAAGCTTCAGGCAGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | CGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCTGCCTGAAGCTTGATGTGCCCAGGGGTCAGGGCTaGGAGAGAGTATTCATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSDGDDVEAEAVCLKLDVPRGQG*ERVFIP Trigger: GGGAATGAATACTCTCTCCCAGCCCTGACCCCTGGG...CACATCAAGCTTCAGGCAGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| 3UTR CAA 72 bp | AGCCCCGAGGTTGGTTCTGCCATCTTAGATGTAGCCTaGGAGGCCTGGGGCAGAACGGACCGAGACAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPEVGSAILDVA*EAWGRTDRDRD Trigger: GTCTCTGTCTCGGTCCGTTCTGCCCCAGGCCTCCAAGGCTACATCTAAGATGGCAGAACCAACCTCGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR TCA 90 bp | GCCAAGCCCCGAGGTTGGTTCTGCCATCTTAGATGTAGCCTTGGAGGCCTGGGGCAATCACTCCGGGCTTaGTGCTGCCAGTCTCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: AKPRGWFCHLRCSLGGLGQSLRA*CCQSRS Trigger: ACTACGAGACTGGCAGCATCAAGCCCGGAGTGATTG...CCCCAGGCCTCCAAGGCTACATCTAAGATGGCAGAACCAACCTCGGGGCTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR TCA 90 bp | CGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCTGCCTGAAGCTTGATGTGCAATCACTCCGGGCTTaGTGCTGCCAGTCTCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSDGDDVEAEAVCLKLDVQSLRA*CCQSRS Trigger: ACTACGAGACTGGCAGCATCAAGCCCGGAGTGATTG...CACATCAAGCTTCAGGCAGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | GTCAGTTCCTTCCAGGCTTTTTGCGCCCGCAGGTTGGGAGTTTGGGATGGGAGGGTGTCGGCTCGCAGGTaGTTCCGCAAACTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VSSFQAFCARRLGVWDGRVSARR*FRKLST Trigger: TGTGGACAGTTTGCGGAAGCACCTGCGAGCCGACAC...CCTCCCATCCCAAACTCCCAACCTGCGGGCGCAAAAAGCCTGGAAGGAACTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | GTACAGAGAGAGGTTCGCCTCGACAGCACACACCGTCTTTCTATAAAGCAGCCTCAGGGCCGCACACCCTaGTGGGCCAGCTCCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: VQREVRLDSTHRLSIKQPQGRTP*WASSTM Trigger: CATCGTGGAGCTGGCCCACCAGGGTGTGCGGCCCTG...AGGCTGCTTTATAGAAAGACGGTGTGTGCTGTCGAGGCGAACCTCTCTCTGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | GCTCCTCCTTCAGCACAAAGTCCTTTCCTTAGCTTCCCTTGCTCAGCTTCTCCACAGGGCCGCACACCCTaGTGGGCCAGCTCCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: APPSAQSPFLSFPCSASPQGRTP*WASSTM Trigger: CATCGTGGAGCTGGCCCACCAGGGTGTGCGGCCCTG...TGGAGAAGCTGAGCAAGGGAAGCTAAGGAAAGGACTTTGTGCTGAAGGAGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGTTCCTTCCAGGCTTTTTGCGCCCGCAGGTTGGGAGTTTGGGATGGGAGGGGAGTAGGATCCCACTaGGTCGTTAGAGGCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSSFQAFCARRLGVWDGRGVGSH*VVRGAG Trigger: TCCAGCGCCTCTAACGACCCAGTGGGATCCTACTCC...CCTCCCATCCCAAACTCCCAACCTGCGGGCGCAAAAAGCCTGGAAGGAACTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGGGCCAAGCCCCGAGGTTGGTTCTGCCATCTTAGATGTAGCCTTGGAGGCTCCTCTTCTCACCGTTaGAGCGAGGAATCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGAKPRGWFCHLRCSLGGSSSHR*SEESPG Trigger: TCCTGGGGATTCCTCGCTCCAACGGTGAGAAGAGGA...GCCTCCAAGGCTACATCTAAGATGGCAGAACCAACCTCGGGGCTTGGCCCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| 3UTR CAA 72 bp | GTTCAGGTGGATGAGCTCAGTTGGCGTCTGCTCGCCTaGGGTACCAGCCTTGGAAAACGCTGTCGCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VQVDELSWRLLA*GTSLGKRCRPK Trigger: TTTGGGGCGACAGCGTTTTCCAAGGCTGGTACCCAAGGCGAGCAGACGCCAACTGAGCTCATCCACCTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCCTTCAGCACAAAGTCCTTTCCTTAGCTTCCCTTGCTCAGCTTCTCCAAGTCACTCCTGTCCCTaGCCCATCCGGCGTTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: APPSAQSPFLSFPCSASPSHSCP*PIRRWV Trigger: CACCCAACGCCGGATGGGGCAGGGACAGGAGTGACT...TGGAGAAGCTGAGCAAGGGAAGCTAAGGAAAGGACTTTGTGCTGAAGGAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | GAAACAGTCAACAAAACAGGCGAGAGGTGTCCACGGGACCATGTTCGTCATTTTAGCTCCACGATGCGCTaGCTCACCACGTCGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ETVNKTGERCPRDHVRHFSSTMR*LTTSGR Trigger: CCTACCCGACGTGGTGAGGCAGCGCATCGTGGAGCT...AAAATGACGAACATGGTCCCGTGGACACCTCTCGCCTGTTTTGTTGACTGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | GTACAGAGAGAGGTTCGCCTCGACAGCACACACCGTCTTTCTATAAAGCAGCCTTGCCCAGCTCAGGGTTaGCCGATGCAGATAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VQREVRLDSTHRLSIKQPCPAQG*PMQIDW Trigger: CCAGTCTATCTGCATCGGCCAACCCTGAGCTGGGCA...AGGCTGCTTTATAGAAAGACGGTGTGTGCTGTCGAGGCGAACCTCTCTCTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| 3UTR CAA 72 bp | TTTGTTTCTGTTATTTCGGGTCGTCACGATCCACGGTaGAGGAGACATGCAGGGAGCATCGCCGCTACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FVSVISGRHDPR*RRHAGSIAATE Trigger: CTCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAACCGTGGATCGTGACGACCCGAAATAACAGAAACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR TCA 90 bp | GAGAAACAGTCAACAAAACAGGCGAGAGGTGTCCACGGGACCATGTTCGTCATTTCCCCAGGATCCCGTTaGTGGAGTAGGATCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EKQSTKQARGVHGTMFVISPGSR*WSRIPL Trigger: CAGTGGGATCCTACTCCATCAACGGGATCCTGGGGA...AATGACGAACATGGTCCCGTGGACACCTCTCGCCTGTTTTGTTGACTGTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | GAGAAACAGTCAACAAAACAGGCGAGAGGTGTCCACGGGACCATGTTCGTCATTGTGTCGGCTCGCAGGTaGTTCCGCAAACTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: EKQSTKQARGVHGTMFVIVSARR*FRKLST Trigger: TGTGGACAGTTTGCGGAAGCACCTGCGAGCCGACAC...AATGACGAACATGGTCCCGTGGACACCTCTCGCCTGTTTTGTTGACTGTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | TATGTACAGAGAGAGGTTCGCCTCGACAGCACACACCGTCTTTCTATAAAGCAGCCCAGGCACCATTCCTaGCAGGGTGGAGGTAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YVQREVRLDSTHRLSIKQPRHHS*QGGGRV Trigger: TACCCTACCTCCACCCTGGCAGGAATGGTGCCTGGG...CTGCTTTATAGAAAGACGGTGTGTGCTGTCGAGGCGAACCTCTCTCTGTACATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | GTTGAGGAGACATGCAGGGAGCATCGCCGCTACCGAGAGAGCAACTACAGGGTGTGTTCTGATTTGATGTaGTCTGATGCCTGGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VEETCREHRRYRESNYRVCSDLM*SDAWKT Trigger: TGTCTTCCAGGCATCAGAGCACATCAAATCAGAACA...CACCCTGTAGTTGCTCTCTCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | AAGTGGGAGAGATGCAGGGCGATGAACACGGAATTACAGAGAAACAGTCAACAACCCAGGCACCATTCCTaGCAGGGTGGAGGTAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KWERCRAMNTELQRNSQQPRHHS*QGGGRV Trigger: TACCCTACCTCCACCCTGGCAGGAATGGTGCCTGGG...TTGTTGACTGTTTCTCTGTAATTCCGTGTTCATCGCCCTGCATCTCTCCCACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | GAGAAACAGTCAACAAAACAGGCGAGAGGTGTCCACGGGACCATGTTCGTCATTGATGGCTGTATGGGTTaGCTGAGAACTCGCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKQSTKQARGVHGTMFVIDGCMG*LRTRSQ Trigger: CTGGGAGCGAGTTCTCAGGCAACCCATACAGCCATC...AATGACGAACATGGTCCCGTGGACACCTCTCGCCTGTTTTGTTGACTGTTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | TATGTACAGAGAGAGGTTCGCCTCGACAGCACACACCGTCTTTCTATAAAGCAGGGAGTAGGATCCCACTaGGTCGTTAGAGGCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YVQREVRLDSTHRLSIKQGVGSH*VVRGAG Trigger: TCCAGCGCCTCTAACGACCCAGTGGGATCCTACTCC...CTGCTTTATAGAAAGACGGTGTGTGCTGTCGAGGCGAACCTCTCTCTGTACATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | GAAACAGTCAACAAAACAGGCGAGAGGTGTCCACGGGACCATGTTCGTCATTTTCCCAGGGGTCAGGGCTaGGAGAGAGTATTCATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ETVNKTGERCPRDHVRHFPRGQG*ERVFIP Trigger: GGGAATGAATACTCTCTCCCAGCCCTGACCCCTGGG...AAAATGACGAACATGGTCCCGTGGACACCTCTCGCCTGTTTTGTTGACTGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | AAGTGGGAGAGATGCAGGGCGATGAACACGGAATTACAGAGAAACAGTCAACAATTGCCACCTTGGGCTTaGAGCCACCAATCACTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KWERCRAMNTELQRNSQQLPPWA*SHQSLR Trigger: CCGGAGTGATTGGTGGCTCCAAGCCCAAGGTGGCAA...TTGTTGACTGTTTCTCTGTAATTCCGTGTTCATCGCCCTGCATCTCTCCCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | GAAACAGTCAACAAAACAGGCGAGAGGTGTCCACGGGACCATGTTCGTCATTTTTCCTCTTCTCACCGTTaGAGCGAGGAATCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ETVNKTGERCPRDHVRHFSSSHR*SEESPG Trigger: TCCTGGGGATTCCTCGCTCCAACGGTGAGAAGAGGA...AAAATGACGAACATGGTCCCGTGGACACCTCTCGCCTGTTTTGTTGACTGTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | AAGTGGGAGAGATGCAGGGCGATGAACACGGAATTACAGAGAAACAGTCAACAATGCCCAGCTCAGGGTTaGCCGATGCAGATAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KWERCRAMNTELQRNSQQCPAQG*PMQIDW Trigger: CCAGTCTATCTGCATCGGCCAACCCTGAGCTGGGCA...TTGTTGACTGTTTCTCTGTAATTCCGTGTTCATCGCCCTGCATCTCTCCCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR TCA 90 bp | GAGAAACAGTCAACAAAACAGGCGAGAGGTGTCCACGGGACCATGTTCGTCATTGATCCTGTTGATGGATaGGACACTGGGAACTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EKQSTKQARGVHGTMFVIDPVDG*DTGNCV Trigger: GACACAGTTCCCAGTGTCTCATCCATCAACAGGATC...AATGACGAACATGGTCCCGTGGACACCTCTCGCCTGTTTTGTTGACTGTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGCGATGAACACGGAATTACAGAGAAACAGTCAACAAAACAGGCGAGAGGTCGCGGAGAAGGGGTCTaGTTTGCAGTGCATATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QGDEHGITEKQSTKQARGRGEGV*FAVHIH Trigger: ATGGATATGCACTGCAAAGCAGACCCCTTCTCCGCG...ACCTCTCGCCTGTTTTGTTGACTGTTTCTCTGTAATTCCGTGTTCATCGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CCA 90 bp | TATGTACAGAGAGAGGTTCGCCTCGACAGCACACACCGTCTTTCTATAAAGCAGCCACCTCCTCTAATGTaGGCAGGATCAGTGTATACC | + |
|
Preference number: 4 (lower is better) Translates to: YVQREVRLDSTHRLSIKQPPPLM*AGSVYT Trigger: GGTATACACTGATCCTGCCCACATTAGAGGAGGTGG...CTGCTTTATAGAAAGACGGTGTGTGCTGTCGAGGCGAACCTCTCTCTGTACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004340.11 |
||
| CDS-3UTR CCA 90 bp | AAGTGGGAGAGATGCAGGGCGATGAACACGGAATTACAGAGAAACAGTCAACAACTGTCCACACCACTCTaGGAGTCTCCATTAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KWERCRAMNTELQRNSQQLSTPL*ESPLGT Trigger: TGTCCCTAATGGAGACTCCCAGAGTGGTGTGGACAG...TTGTTGACTGTTTCTCTGTAATTCCGTGTTCATCGCCCTGCATCTCTCCCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | TGTCACAGAAACGGCGCGCGGGCCAGAGGCGGGCGGGCTTCCGGACGGCGCCGCCTGCCCCATCCGGCGTaGGGTGGAAAGGCTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CHRNGARARGGRASGRRRLPHPA*GGKAAE Trigger: TTCAGCAGCCTTTCCACCCAACGCCGGATGGGGCAG...GCGGCGCCGTCCGGAAGCCCGCCCGCCTCTGGCCCGCGCGCCGTTTCTGTGACA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | GTCTCGAGGTGGGGGTGGGACAGGGACGGTGGCCGAGAGGCAGCGCGTCGCTTCGTTGCCACCTTGGGCTaGGAGCCACCAATCACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: VSRWGWDRDGGREAARRFVATLG*EPPITP Trigger: CGGAGTGATTGGTGGCTCCAAGCCCAAGGTGGCAAC...GAAGCGACGCGCTGCCTCTCGGCCACCGTCCCTGTCCCACCCCCACCTCGAGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | CGAGGTGGGGGTGGGACAGGGACGGTGGCCGAGAGGCAGCGCGTCGCTTCGGTCGGATGGCTGTATGGGTaGCCTGAGAACTCGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RGGGGTGTVAERQRVASVGWLYG*PENSLP Trigger: TGGGAGCGAGTTCTCAGGCAACCCATACAGCCATCC...GACCGAAGCGACGCGCTGCCTCTCGGCCACCGTCCCTGTCCCACCCCCACCTCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | CGGGCGTCCGAAGTGGGCTGCCCCTGGGTGGGCCACGCTGATTGTGTGTCACAGTTCCTCTTCTCACCGTaGGAGCGAGGAATCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RASEVGCPWVGHADCVSQFLFSP*ERGIPR Trigger: CCTGGGGATTCCTCGCTCCAACGGTGAGAAGAGGAA...CTGTGACACACAATCAGCGTGGCCCACCCAGGGGCAGCCCACTTCGGACGCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS CCA 90 bp | GGAGCGAGGAATCCCCAGGATCCCGTTGATGGAGTAGGATCCCACTaGGTCGTTAGAGGCGCTGGAAACAGGAGGGGAGGCCGTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GARNPQDPVDGVGSH*VVRGAGNRRGGRAG Trigger: CCCAGCACGGCCTCCCCTCCTGTTTCCAGCGCCTCTAACGACCCAGTGGGATCCTACTCCATCAACGGGATCCTGGGGATTCCTCGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004340.11 ENSMUST00000173346.4 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | CCTCCCTCCCTCTGGGGTGGGCGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGCAGATAGACTGGACTaGACTTCATCAAGCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPSLWGGRSDGDDVEAEAADRLD*TSSSPG Trigger: CCCTGGGCTTGATGAAGTCAAGTCCAGTCTATCTGC...AGCTTCGGCCTCCACATCGTCCCCGTCTGACCGCCCACCCCAGAGGGAGGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | GATTGTGTGTCACAGAAACGGCGCGCGGGCCAGAGGCGGGCGGGCTTCCGGACGCTTAGTAAGGCGGGGTaGCTGAATCTCCAAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: DCVSQKRRAGQRRAGFRTLSKAG*LNLQAS Trigger: TGAGGCTTGGAGATTCAGCAACCCCGCCTTACTAAG...CGTCCGGAAGCCCGCCCGCCTCTGGCCCGCGCGCCGTTTCTGTGACACACAATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | GGGTCGTCACGATCCACGGTTGAGGAGACATGCAGGGAGCATCGCCGCTACCGACTGCCCAGCTCAGGGTaGGCCGATGCAGATAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: GSSRSTVEETCREHRRYRLPSSG*ADADRL Trigger: CAGTCTATCTGCATCGGCCAACCCTGAGCTGGGCAG...TCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAACCGTGGATCGTGACGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | GATTGTGTGTCACAGAAACGGCGCGCGGGCCAGAGGCGGGCGGGCTTCCGGACGTTGTATTCGGCAATCTaGTCCACCACTTTGGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: DCVSQKRRAGQRRAGFRTLYSAI*STTLGV Trigger: AACGCCCAAAGTGGTGGACAAGATTGCCGAATACAA...CGTCCGGAAGCCCGCCCGCCTCTGGCCCGCGCGCCGTTTCTGTGACACACAATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | GCCAAGCCCCGAGGTTGGTTCTGCCATCTTAGATGTAGCCTTGGAGGCCTGGGGCTGCCCAGCTCAGGGTaGGCCGATGCAGATAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: AKPRGWFCHLRCSLGGLGLPSSG*ADADRL Trigger: CAGTCTATCTGCATCGGCCAACCCTGAGCTGGGCAG...CCCCAGGCCTCCAAGGCTACATCTAAGATGGCAGAACCAACCTCGGGGCTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | GGGTCGTCACGATCCACGGTTGAGGAGACATGCAGGGAGCATCGCCGCTACCGAGGATGGCTGTATGGGTaGCCTGAGAACTCGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSSRSTVEETCREHRRYRGWLYG*PENSLP Trigger: TGGGAGCGAGTTCTCAGGCAACCCATACAGCCATCC...TCGGTAGCGGCGATGCTCCCTGCATGTCTCCTCAACCGTGGATCGTGACGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS GCA 90 bp | TCCAGAGCTTCCAGCTGCTGCTGGGTGAAGGTGTCGGCTCGCAGGTaGTTCCGCAAACTGTCCACACCACTCTGGGAGTCTCCATTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRASSCCWVKVSARR*FRKLSTPLWESPLG Trigger: CCCTAATGGAGACTCCCAGAGTGGTGTGGACAGTTTGCGGAAGCACCTGCGAGCCGACACCTTCACCCAGCAGCAGCTGGAAGCTCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004340.11 ENSMUST00000173346.4 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | CGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCTGCCTGAAGCTTGATGTGTTCCTCTTCTCACCGTaGGAGCGAGGAATCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSDGDDVEAEAVCLKLDVFLFSP*ERGIPR Trigger: CCTGGGGATTCCTCGCTCCAACGGTGAGAAGAGGAA...CACATCAAGCTTCAGGCAGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | GGGTCTCCCCGGCGGCTCCTCCTTCAGCACAAAGTCCTTTCCTTAGCTTCCCTTTGTGTGCCTGACACATaGCTGCCCAGCTCAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSPRRLLLQHKVLSLASLCVPDT*LPSSGL Trigger: CAACCCTGAGCTGGGCAGCAATGTGTCAGGCACACA...AAGGGAAGCTAAGGAAAGGACTTTGTGCTGAAGGAGGAGCCGCCGGGGAGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | CAAGGGGCCAAGCCCCGAGGTTGGTTCTGCCATCTTAGATGTAGCCTTGGAGGCTGTGTGCCTGACACATaGCTGCCCAGCTCAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QGAKPRGWFCHLRCSLGGCVPDT*LPSSGL Trigger: CAACCCTGAGCTGGGCAGCAATGTGTCAGGCACACA...GCCTCCAAGGCTACATCTAAGATGGCAGAACCAACCTCGGGGCTTGGCCCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS GCA 90 bp | TGGTGCTCGTCATATCACGACCGGTCACAACGGGGTACGTCTGTGTaGCTGACACATTGCTGCCCAGCTCAGGGTTGGCCGATGCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: WCSSYHDRSQRGTSV*LTHCCPAQGWPMQI Trigger: TATCTGCATCGGCCAACCCTGAGCTGGGCAGCAATGTGTCAGGCACACAGACGTACCCCGTTGTGACCGGTCGTGATATGACGAGCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS CCA 90 bp | AAGGTGTCGGCTCGCAGGTGCTTCCGCAAACTGTCCACACCACTCTaGGAGTCTCCATTAGGGACAGAGCCCTCAGACACATCTTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KVSARRCFRKLSTPL*ESPLGTEPSDTSSS Trigger: CGAGGAAGATGTGTCTGAGGGCTCTGTCCCTAATGGAGACTCCCAGAGTGGTGTGGACAGTTTGCGGAAGCACCTGCGAGCCGACACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174490.9 |
||
| CDS CCA 90 bp | AAGGTGTCGGCTCGCAGGTGCTTCCGCAAACTGTCCACACCACTCTaGGAGTCTCCATTAGGGACAGAGCCCTCAGACACATCGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KVSARRCFRKLSTPL*ESPLGTEPSDTSLE Trigger: CTCCAACGATGTGTCTGAGGGCTCTGTCCCTAATGGAGACTCCCAGAGTGGTGTGGACAGTTTGCGGAAGCACCTGCGAGCCGACACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173346.4 |
||
| CDS-3UTR CAA 90 bp | CGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCTGCCTGAAGCTTGATGTGCTTAGTAAGGCGGGGTaGCTGAATCTCCAAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSDGDDVEAEAVCLKLDVLSKAG*LNLQAS Trigger: TGAGGCTTGGAGATTCAGCAACCCCGCCTTACTAAG...CACATCAAGCTTCAGGCAGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | GCTCCTCCTTCAGCACAAAGTCCTTTCCTTAGCTTCCCTTGCTCAGCTTCTCCACTGCCCCATCCGGCGTaGGGTGGAAAGGCTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: APPSAQSPFLSFPCSASPLPHPA*GGKAAE Trigger: TTCAGCAGCCTTTCCACCCAACGCCGGATGGGGCAG...TGGAGAAGCTGAGCAAGGGAAGCTAAGGAAAGGACTTTGTGCTGAAGGAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | GCTCCTCCTTCAGCACAAAGTCCTTTCCTTAGCTTCCCTTGCTCAGCTTCTCCAGTTGCCACCTTGGGCTaGGAGCCACCAATCACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: APPSAQSPFLSFPCSASPVATLG*EPPITP Trigger: CGGAGTGATTGGTGGCTCCAAGCCCAAGGTGGCAAC...TGGAGAAGCTGAGCAAGGGAAGCTAAGGAAAGGACTTTGTGCTGAAGGAGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGTTCCTTCCAGGCTTTTTGCGCCCGCAGGTTGGGAGTTTGGGATGGGAGGTTCCCCTGTTCTGATTaGATGTGCTCTGATGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSSFQAFCARRLGVWDGRFPCSD*MCSDAW Trigger: CCAGGCATCAGAGCACATCAAATCAGAACAGGGGAA...CCTCCCATCCCAAACTCCCAACCTGCGGGCGCAAAAAGCCTGGAAGGAACTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS CCA 90 bp | AAGGTGTCGGCTCGCAGGTGCTTCCGCAAACTGTCCACACCACTCTaGGAGTCTCCATTAGGGACAGAGCCCTCAGACACATCTCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: KVSARRCFRKLSTPL*ESPLGTEPSDTSLK Trigger: TTTAAGAGATGTGTCTGAGGGCTCTGTCCCTAATGGAGACTCCCAGAGTGGTGTGGACAGTTTGCGGAAGCACCTGCGAGCCGACACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004340.11 |
||
| CDS-3UTR CAA 90 bp | GAGAAACAGTCAACAAAACAGGCGAGAGGTGTCCACGGGACCATGTTCGTCATTGTCGGGTTCTGTCGCTaGTATTCGGCAATCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EKQSTKQARGVHGTMFVIVGFCR*YSAILS Trigger: GGACAAGATTGCCGAATACAAGCGACAGAACCCGAC...AATGACGAACATGGTCCCGTGGACACCTCTCGCCTGTTTTGTTGACTGTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS-3UTR CAA 90 bp | GTACAGAGAGAGGTTCGCCTCGACAGCACACACCGTCTTTCTATAAAGCAGCCTTTCCCCTGTTCTGATTaGATGTGCTCTGATGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VQREVRLDSTHRLSIKQPFPCSD*MCSDAW Trigger: CCAGGCATCAGAGCACATCAAATCAGAACAGGGGAA...AGGCTGCTTTATAGAAAGACGGTGTGTGCTGTCGAGGCGAACCTCTCTCTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
||
| CDS CCA 90 bp | TCTCTTAAAGTCCAGACCAGATGTAAACCTCCACCTCCTCTAATGTaGGCAGGATCAGTGTATACCTCGACTTCCTCGCGTTTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLKVQTRCKPPPPLM*AGSVYTSTSSRFLF Trigger: GAAGAGGAAACGCGAGGAAGTCGAGGTATACACTGATCCTGCCCACATTAGAGGAGGTGGAGGTTTACATCTGGTCTGGACTTTAAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004340.11 |
||
| CDS-3UTR CAA 90 bp | AAGTGGGAGAGATGCAGGGCGATGAACACGGAATTACAGAGAAACAGTCAACAAGCAGATAGACTGGACTaGACTTCATCAAGCCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: KWERCRAMNTELQRNSQQADRLD*TSSSPG Trigger: CCCTGGGCTTGATGAAGTCAAGTCCAGTCTATCTGC...TTGTTGACTGTTTCTCTGTAATTCCGTGTTCATCGCCCTGCATCTCTCCCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| CDS-3UTR CAA 90 bp | CAGGGCGATGAACACGGAATTACAGAGAAACAGTCAACAAAACAGGCGAGAGGTTTGTATTCGGCAATCTaGTCCACCACTTTGGGCGTT | + |
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Preference number: 5 (lower is better) Translates to: QGDEHGITEKQSTKQARGLYSAI*STTLGV Trigger: AACGCCCAAAGTGGTGGACAAGATTGCCGAATACAA...ACCTCTCGCCTGTTTTGTTGACTGTTTCTCTGTAATTCCGTGTTCATCGCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| CDS TCA 72 bp | ATCACGACCGGTCACAACGGGGTACGTCTGTGTGCCTaGCACATTGCTGCCCAGCTCAGGGTTGGCCGATGC | + |
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Preference number: 6 (lower is better) Translates to: ITTGHNGVRLCA*HIAAQLRVGRC Trigger: GCATCGGCCAACCCTGAGCTGGGCAGCAATGTGTCAGGCACACAGACGTACCCCGTTGTGACCGGTCGTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| CDS GCA 72 bp | GAAGGACGCTCAAAGACTCGATCCAGAGCTTCCAGCTaGTGCTGGGTGAAGGTGTCGGCTCGCAGGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: EGRSKTRSRASS*CWVKVSARRCF Trigger: GAAGCACCTGCGAGCCGACACCTTCACCCAGCAGCAGCTGGAAGCTCTGGATCGAGTCTTTGAGCGTCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004340.11 ENSMUST00000173346.4 ENSMUST00000174490.9 |
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| CDS GCA 72 bp | TCATATCACGACCGGTCACAACGGGGTACGTCTGTGTaGCTGACACATTGCTGCCCAGCTCAGGGTTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: SYHDRSQRGTSV*LTHCCPAQGWP Trigger: CGGCCAACCCTGAGCTGGGCAGCAATGTGTCAGGCACACAGACGTACCCCGTTGTGACCGGTCGTGATATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| CDS CAA 72 bp | CCGGTCACAACGGGGTACGTCTGTGTGCCTGACACATaGCTGCCCAGCTCAGGGTTGGCCGATGCAGATAGA | + |
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Preference number: 6 (lower is better) Translates to: PVTTGYVCVPDT*LPSSGLADADR Trigger: TCTATCTGCATCGGCCAACCCTGAGCTGGGCAGCAATGTGTCAGGCACACAGACGTACCCCGTTGTGACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004340.11 ENSMUST00000173346.4 ENSMUST00000174490.9 |
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| CDS CAA 90 bp | ACGGGGTACGTCTGTGTGCCTGACACATTGCTGCCCAGCTCAGGGTaGGCCGATGCAGATAGACTGGACTTGACTTCATCAAGCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TGYVCVPDTLLPSSG*ADADRLDLTSSSPG Trigger: CCCTGGGCTTGATGAAGTCAAGTCCAGTCTATCTGCATCGGCCAACCCTGAGCTGGGCAGCAATGTGTCAGGCACACAGACGTACCCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004340.11 ENSMUST00000173346.4 ENSMUST00000174490.9 |
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| CDS GCA 72 bp | TCACAACGGGGTACGTCTGTGTGCCTGACACATTGCTaGCCAGCTCAGGGTTGGCCGATGCAGATAGACTGG | + |
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Preference number: 6 (lower is better) Translates to: SQRGTSVCLTHC*PAQGWPMQIDW Trigger: CCAGTCTATCTGCATCGGCCAACCCTGAGCTGGGCAGCAATGTGTCAGGCACACAGACGTACCCCGTTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004340.11 ENSMUST00000173346.4 ENSMUST00000174490.9 |
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| CDS GCA 72 bp | CATTGTAGGCGGTGTACTGGGGATGGCTGTATGGGTTaGCTGAGAACTCGCTCCCAGGCACCATTCCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: HCRRCTGDGCMG*LRTRSQAPFLP Trigger: TGGCAGGAATGGTGCCTGGGAGCGAGTTCTCAGGCAACCCATACAGCCATCCCCAGTACACCGCCTACAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| CDS CCA 72 bp | GCTCGCAGGTGCTTCCGCAAACTGTCCACACCACTCTaGGAGTCTCCATTAGGGACAGAGCCCTCAGACACA | + |
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Preference number: 6 (lower is better) Translates to: ARRCFRKLSTPL*ESPLGTEPSDT Trigger: TGTGTCTGAGGGCTCTGTCCCTAATGGAGACTCCCAGAGTGGTGTGGACAGTTTGCGGAAGCACCTGCGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004340.11 ENSMUST00000173346.4 ENSMUST00000174490.9 |
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| CDS CAA 90 bp | ATATCACGACCGGTCACAACGGGGTACGTCTGTGTGCCTGACACATaGCTGCCCAGCTCAGGGTTGGCCGATGCAGATAGACTGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: ISRPVTTGYVCVPDT*LPSSGLADADRLDL Trigger: CAAGTCCAGTCTATCTGCATCGGCCAACCCTGAGCTGGGCAGCAATGTGTCAGGCACACAGACGTACCCCGTTGTGACCGGTCGTGATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004340.11 ENSMUST00000174490.9 |
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| CDS CAA 90 bp | ACATTGCTGCCCAGCTCAGGGTTGGCCGATGCAGATAGACTGGACTaGACTTCATCAAGCCCAGGGGTCAGGGCTGGGAGAGAGTATTCA | + |
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Preference number: 6 (lower is better) Translates to: TLLPSSGLADADRLD*TSSSPGVRAGREYS Trigger: TGAATACTCTCTCCCAGCCCTGACCCCTGGGCTTGATGAAGTCAAGTCCAGTCTATCTGCATCGGCCAACCCTGAGCTGGGCAGCAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004340.11 ENSMUST00000173346.4 ENSMUST00000174490.9 |
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| CDS CAA 72 bp | TATACCTCGACTTCCTCGCGTTTCCTCTTCTCACCGTaGGAGCGAGGAATCCCCAGGATCCCGTTGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: YTSTSSRFLFSP*ERGIPRIPLME Trigger: CTCCATCAACGGGATCCTGGGGATTCCTCGCTCCAACGGTGAGAAGAGGAAACGCGAGGAAGTCGAGGTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004340.11 |
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| CDS CAA 72 bp | TCAGACACATCTTCCTCGCGTTTCCTCTTCTCACCGTaGGAGCGAGGAATCCCCAGGATCCCGTTGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: SDTSSSRFLFSP*ERGIPRIPLME Trigger: CTCCATCAACGGGATCCTGGGGATTCCTCGCTCCAACGGTGAGAAGAGGAAACGCGAGGAAGATGTGTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174490.9 |
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| CDS CAA 72 bp | GTCTGTGTGCCTGACACATTGCTGCCCAGCTCAGGGTaGGCCGATGCAGATAGACTGGACTTGACTTCATCA | + |
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Preference number: 6 (lower is better) Translates to: VCVPDTLLPSSG*ADADRLDLTSS Trigger: TGATGAAGTCAAGTCCAGTCTATCTGCATCGGCCAACCCTGAGCTGGGCAGCAATGTGTCAGGCACACAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004340.11 ENSMUST00000173346.4 ENSMUST00000174490.9 |
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| CDS CCA 72 bp | GTCCAGACCAGATGTAAACCTCCACCTCCTCTAATGTaGGCAGGATCAGTGTATACCTCGACTTCCTCGCGT | + |
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Preference number: 6 (lower is better) Translates to: VQTRCKPPPPLM*AGSVYTSTSSR Trigger: ACGCGAGGAAGTCGAGGTATACACTGATCCTGCCCACATTAGAGGAGGTGGAGGTTTACATCTGGTCTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004340.11 |
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| CDS TCA 72 bp | GGGCTGGGAGAGAGTATTCATTCCCCTGTTCTGATTTaGTGTGCTCTGATGCCTGGAAGACATCGGGATAGG | + |
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Preference number: 6 (lower is better) Translates to: GLGESIHSPVLI*CALMPGRHRDR Trigger: CCTATCCCGATGTCTTCCAGGCATCAGAGCACATCAAATCAGAACAGGGGAATGAATACTCTCTCCCAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004340.11 ENSMUST00000173346.4 ENSMUST00000174490.9 |
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