Pregenerated sensors for PAWR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035873Ensembl transcript IDs: ENSMUST00000095313.5, ENSMUST00000218332.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACGCATTAGTAATAAGGCATTGTAGGCCAACTCCCCCAAGGATGTaGATTCATGTAAACAAAGACTATGCATATTCCTTTAGGGAGAAT | + |
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Preference number: 1 (lower is better) Translates to: HALVIRHCRPTPPRM*IHVNKDYAYSFREN Trigger: ATTCTCCCTAAAGGAATATGCATAGTCTTTGTTTACATGAATTCACATCCTTGGGGGAGTTGGCCTACAATGCCTTATTACTAATGCGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR TCA 90 bp | ATGGCTGTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCCCGCCGCGGGGATGTTaGCCACGCCGGTGGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: MAVTLNHILSGYHTKPRGPPRGC*PRRWSG Trigger: GCCGCTCCACCGGCGTGGTCAACATCCCCGCGGCGG...GCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAACAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR CCA 90 bp | GTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCATTACCATCCCGCGGGGGACTTaGCGGCTGGATCCCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: VTLNHILSGYHTKPRGITIPRGT*RLDPRR Trigger: GCGGCGGGGATCCAGCCGCCAAGTCCCCCGCGGGAT...GGTAATGCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR CCA 90 bp | ATGGCTGTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCCCTCCAGGAAGTCCGTaGTGGTGCTGCCGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: MAVTLNHILSGYHTKPRGPPGSP*WCCRRS Trigger: GGAGCGGCGGCAGCACCACCACGGACTTCCTGGAGG...GCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAACAGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR GCA 90 bp | GTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCATTACCGGGCCCGCGGGGTTCTaGTTGGCGCGCATCTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: VTLNHILSGYHTKPRGITGPAGF*LARIFS Trigger: CGAGAAGATGCGCGCCAAGCAGAACCCCGCGGGCCC...GGTAATGCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR CCA 90 bp | ATGGCTGTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCCCGCGGGGTTCTGCTTaGCGCGCATCTTCTCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MAVTLNHILSGYHTKPRGPRGSA*RASSRA Trigger: AGCGCGAGAAGATGCGCGCCAAGCAGAACCCCGCGG...GCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAACAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR GCA 90 bp | ATGGCTGTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCGGGGCAGGTAGGATGTaGCTGGATCTGGGAGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: MAVTLNHILSGYHTKPRGGAGRM*LDLGGS Trigger: CGACCCTCCCAGATCCAGGCACATCCTACCTGCCCC...GCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAACAGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR CCA 90 bp | ATGGCTGTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCCAGGTAGGATGTGCCTaGATCTGGGAGGGTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MAVTLNHILSGYHTKPRGQVGCA*IWEGRS Trigger: GCTGCGACCCTCCCAGATCCAGGCACATCCTACCTG...GCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAACAGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR GCA 90 bp | GTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCATTACCTCTCGATCTGCCCCTTaGCTTTCCTGGCGCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VTLNHILSGYHTKPRGITSRSAP*LSWRWV Trigger: GACCCAGCGCCAGGAAAGGCAAGGGGCAGATCGAGA...GGTAATGCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR TCA 90 bp | GTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCATTACCTTCCAAGGTGCTACTTaGGGAGAAACTAGCCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: VTLNHILSGYHTKPRGITFQGAT*GETSRR Trigger: GCGCCGGCTAGTTTCTCCTCAAGTAGCACCTTGGAA...GGTAATGCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR CCA 90 bp | GTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCATTACCTGGATGGTGTTTTGCTaGGTGATGGCATCCTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VTLNHILSGYHTKPRGITWMVFC*VMASSR Trigger: GCGAGAGGATGCCATCACCCAGCAAAACACCATCCA...GGTAATGCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR CCA 90 bp | ATGGCTGTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCGTCGCAGCTTCATTCTaGATGGTGTTTTGCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MAVTLNHILSGYHTKPRGVAASF*MVFCWV Trigger: CACCCAGCAAAACACCATCCAGAATGAAGCTGCGAC...GCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAACAGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR CCA 90 bp | GTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCATTACCGCTTTTGTATCTGCCTaGAACTGTTCTCGACGGGTC | + |
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Preference number: 4 (lower is better) Translates to: VTLNHILSGYHTKPRGITAFVSA*NCSRRV Trigger: GACCCGTCGAGAACAGTTCCAGGCAGATACAAAAGC...GGTAATGCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR CCA 90 bp | ATGGCTGTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCCATCTTCTGGGGCACTaGTTGTGCTTTTGTATCTGC | + |
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Preference number: 4 (lower is better) Translates to: MAVTLNHILSGYHTKPRGHLLGH*LCFCIC Trigger: GCAGATACAAAAGCACAACCAGTGCCCCAGAAGATG...GCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAACAGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR GCA 90 bp | GTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCATTACCCCGTTCCTTCTGTCCTaGTTCATCATCTTCGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: VTLNHILSGYHTKPRGITPFLLS*FIIFVL Trigger: GAGTACGAAGATGATGAAGCAGGACAGAAGGAACGG...GGTAATGCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR TCA 90 bp | GTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCATTACCTCGGGGATATCTATTTaGGATTTCATCTTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTLNHILSGYHTKPRGITSGISI*DFIFWG Trigger: GCCCCAGAAGATGAAATCTCAAATAGATATCCCCGA...GGTAATGCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR GCA 90 bp | GTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCATTACCTTGTGCTTTTGTATCTaGCTGGAACTGTTCTCGACG | + |
|
Preference number: 4 (lower is better) Translates to: VTLNHILSGYHTKPRGITLCFCI*LELFST Trigger: CGTCGAGAACAGTTCCAGGCAGATACAAAAGCACAA...GGTAATGCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR TCA 90 bp | ATGGCTGTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCAATCGATCTCTTCCTTaGGTTTCCCAATCATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MAVTLNHILSGYHTKPRGNRSLP*VSQSFL Trigger: AAGAAATGATTGGGAAACTCAAGGAAGAGATCGATT...GCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAACAGCCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR GCA 90 bp | GTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCATTACCAGTCGAAGGTTTTCTTaGCTTTCTCTTACAACTTCC | + |
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Preference number: 4 (lower is better) Translates to: VTLNHILSGYHTKPRGITSRRFS*LSLTTS Trigger: GGAAGTTGTAAGAGAAAGGCAAGAAAACCTTCGACT...GGTAATGCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR GCA 90 bp | ATGGCTGTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCTTTTCCTGTTTTAGTTaGTCGTTCTCATCTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: MAVTLNHILSGYHTKPRGFSCFS*SFSSSM Trigger: CATGGAAGATGAGAACGAGCAACTAAAACAGGAAAA...GCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAACAGCCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS GCA 90 bp | TGGAGCGGCGCTTCTCCCGCAGCTTCCTCTTCTCGATCTGCCCCTTaGCTTTCCTGGCGCTGGGTCCCGAGCTGCGGCCCTTCTCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: WSGASPAASSSRSAP*LSWRWVPSCGPSPG Trigger: CCCGGGAGAAGGGCCGCAGCTCGGGACCCAGCGCCAGGAAAGGCAAGGGGCAGATCGAGAAGAGGAAGCTGCGGGAGAAGCGCCGCTCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095313.5 ENSMUST00000218332.2 |
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| CDS CCA 90 bp | CCCGCAGCTTCCTCTTCTCGATCTGCCCCTTGCCTTTCCTGGCGCTaGGTCCCGAGCTGCGGCCCTTCTCCCGGGCGCTATCCGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PAASSSRSAPCLSWR*VPSCGPSPGRYPAP Trigger: AGGAGCCGGATAGCGCCCGGGAGAAGGGCCGCAGCTCGGGACCCAGCGCCAGGAAAGGCAAGGGGCAGATCGAGAAGAGGAAGCTGCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095313.5 ENSMUST00000218332.2 |
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| CDS TCA 90 bp | ATCTGCCTGGAACTGTTCTCGACGGGTCCTCCGCCGCGGGGATGTTaGCCACGCCGGTGGAGCGGCGCTTCTCCCGCAGCTTCCTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: ICLELFSTGPPPRGC*PRRWSGASPAASSS Trigger: AGAAGAGGAAGCTGCGGGAGAAGCGCCGCTCCACCGGCGTGGTCAACATCCCCGCGGCGGAGGACCCGTCGAGAACAGTTCCAGGCAGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218332.2 |
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| CDS GCA 90 bp | ATCTGCCTGGAACTGTTCTCGACGGGTCCTGGGGCAGGTAGGATGTaGCTGGATCTGGGAGGGTCGCAGCTTCATTCTGGATGGTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: ICLELFSTGPGAGRM*LDLGGSQLHSGWCF Trigger: AAAACACCATCCAGAATGAAGCTGCGACCCTCCCAGATCCAGGCACATCCTACCTGCCCCAGGACCCGTCGAGAACAGTTCCAGGCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS CCA 90 bp | AACTGTTCTCGACGGGTCCTGGGGCAGGTAGGATGTGCCTGGATCTaGGAGGGTCGCAGCTTCATTCTGGATGGTGTTTTGCTGGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: NCSRRVLGQVGCAWI*EGRSFILDGVLLGD Trigger: ATCACCCAGCAAAACACCATCCAGAATGAAGCTGCGACCCTCCCAGATCCAGGCACATCCTACCTGCCCCAGGACCCGTCGAGAACAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR CAA 90 bp | ATGGCTGTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCTCCGCCGCGGGGATGTaGACCACGCCGGTGGAGCGG | + |
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Preference number: 5 (lower is better) Translates to: MAVTLNHILSGYHTKPRGSAAGM*TTPVER Trigger: CCGCTCCACCGGCGTGGTCAACATCCCCGCGGCGGA...GCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAACAGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR CAA 90 bp | GTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCATTACCCCCGCGGGGTTCTGCTaGGCGCGCATCTTCTCGCGC | + |
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Preference number: 5 (lower is better) Translates to: VTLNHILSGYHTKPRGITPAGFC*ARIFSR Trigger: GCGCGAGAAGATGCGCGCCAAGCAGAACCCCGCGGG...GGTAATGCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR CAA 90 bp | ATGGCTGTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCCTTCTGGGGCACTGGTaGTGCTTTTGTATCTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: MAVTLNHILSGYHTKPRGLLGHW*CFCICL Trigger: CAGGCAGATACAAAAGCACAACCAGTGCCCCAGAAG...GCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAACAGCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR CAA 90 bp | ATGGCTGTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCATTCTGGATGGTGTTTaGCTGGGTGATGGCATCCTC | + |
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Preference number: 5 (lower is better) Translates to: MAVTLNHILSGYHTKPRGILDGV*LGDGIL Trigger: GAGGATGCCATCACCCAGCAAAACACCATCCAGAAT...GCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAACAGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR CAA 90 bp | ATGGCTGTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCTTCGGGGATATCTATTaGAGATTTCATCTTCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: MAVTLNHILSGYHTKPRGFGDIY*RFHLLG Trigger: CCCCAGAAGATGAAATCTCAAATAGATATCCCCGAA...GCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAACAGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR CAA 90 bp | GTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCATTACCGCATTTGCATCTCTGTaGTGTCTACTGAAACCACTT | + |
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Preference number: 5 (lower is better) Translates to: VTLNHILSGYHTKPRGITAFASL*CLLKPL Trigger: AAGTGGTTTCAGTAGACACAACAGAGATGCAAATGC...GGTAATGCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR CAA 90 bp | GTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCATTACCCATTTCTTCTTTATCTaGCATCAGCCTCACAAGTCG | + |
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Preference number: 5 (lower is better) Translates to: VTLNHILSGYHTKPRGITHFFFI*HQPHKS Trigger: CGACTTGTGAGGCTGATGCAAGATAAAGAAGAAATG...GGTAATGCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS-3UTR CAA 90 bp | ATGGCTGTTACTTTGAACCATATATTATCTGGATATCACACAAAACCAAGAGGCAAATCGATCTCTTCCTaGAGTTTCCCAATCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: MAVTLNHILSGYHTKPRGKSISS*SFPIIS Trigger: AGAAATGATTGGGAAACTCAAGGAAGAGATCGATTT...GCCTCTTGGTTTTGTGTGATATCCAGATAATATATGGTTCAAAGTAACAGCCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS CCA 72 bp | TCTCGCGCTTCGCCTTCCACTCCTCCAGGAAGTCCGTaGTGGTGCTGCCGCCGCTCCGGTAGCCGCCGGTCG | + |
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Preference number: 6 (lower is better) Translates to: SRASPSTPPGSP*WCCRRSGSRRS Trigger: CGACCGGCGGCTACCGGAGCGGCGGCAGCACCACCACGGACTTCCTGGAGGAGTGGAAGGCGAAGCGCGAGA 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095313.5 ENSMUST00000218332.2 |
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| CDS CAA 72 bp | GGAACTGTTCTCGACGGGTCCTCCGCCGCGGGGATGTaGACCACGCCGGTGGAGCGGCGCTTCTCCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GTVLDGSSAAGM*TTPVERRFSRS Trigger: GCTGCGGGAGAAGCGCCGCTCCACCGGCGTGGTCAACATCCCCGCGGCGGAGGACCCGTCGAGAACAGTTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218332.2 |
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| CDS TCA 72 bp | GAACTGTTCTCGACGGGTCCTCCGCCGCGGGGATGTTaGCCACGCCGGTGGAGCGGCGCTTCTCCCGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: ELFSTGPPPRGC*PRRWSGASPAA Trigger: AGCTGCGGGAGAAGCGCCGCTCCACCGGCGTGGTCAACATCCCCGCGGCGGAGGACCCGTCGAGAACAGTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218332.2 |
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| CDS CAA 90 bp | TATCTGCCTGGAACTGTTCTCGACGGGTCCTCCGCCGCGGGGATGTaGACCACGCCGGTGGAGCGGCGCTTCTCCCGCAGCTTCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: YLPGTVLDGSSAAGM*TTPVERRFSRSFLF Trigger: GAAGAGGAAGCTGCGGGAGAAGCGCCGCTCCACCGGCGTGGTCAACATCCCCGCGGCGGAGGACCCGTCGAGAACAGTTCCAGGCAGATA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218332.2 |
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| CDS TCA 72 bp | CTTCGTACTCATCTAAGCACTCCGCCGCGGGGATGTTaGCCACGCCGGTGGAGCGGCGCTTCTCCCGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LRTHLSTPPRGC*PRRWSGASPAA Trigger: AGCTGCGGGAGAAGCGCCGCTCCACCGGCGTGGTCAACATCCCCGCGGCGGAGTGCTTAGATGAGTACGAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS CAA 72 bp | TCTTCGTACTCATCTAAGCACTCCGCCGCGGGGATGTaGACCACGCCGGTGGAGCGGCGCTTCTCCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSYSSKHSAAGM*TTPVERRFSRS Trigger: GCTGCGGGAGAAGCGCCGCTCCACCGGCGTGGTCAACATCCCCGCGGCGGAGTGCTTAGATGAGTACGAAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS CCA 72 bp | CGACGGGTCCTGGGGCAGGTAGGATGTGCCTGGATCTaGGAGGGTCGCAGCTTCATTCTGGATGGTGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: RRVLGQVGCAWI*EGRSFILDGVL Trigger: CAAAACACCATCCAGAATGAAGCTGCGACCCTCCCAGATCCAGGCACATCCTACCTGCCCCAGGACCCGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS CCA 72 bp | GATGTGCCTGGATCTGGGAGGGTCGCAGCTTCATTCTaGATGGTGTTTTGCTGGGTGATGGCATCCTCTCGC | + |
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Preference number: 6 (lower is better) Translates to: DVPGSGRVAASF*MVFCWVMASSR Trigger: GCGAGAGGATGCCATCACCCAGCAAAACACCATCCAGAATGAAGCTGCGACCCTCCCAGATCCAGGCACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS GCA 72 bp | TCTGGGAGGGTCGCAGCTTCATTCTGGATGGTGTTTTaGTGGGTGATGGCATCCTCTCGCTTCCGTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SGRVAASFWMVF*WVMASSRFRSF Trigger: GAAGGAACGGAAGCGAGAGGATGCCATCACCCAGCAAAACACCATCCAGAATGAAGCTGCGACCCTCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS CCA 72 bp | GGGAGGGTCGCAGCTTCATTCTGGATGGTGTTTTGCTaGGTGATGGCATCCTCTCGCTTCCGTTCCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: GRVAASFWMVFC*VMASSRFRSFC Trigger: ACAGAAGGAACGGAAGCGAGAGGATGCCATCACCCAGCAAAACACCATCCAGAATGAAGCTGCGACCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS CAA 72 bp | ATCTGGGAGGGTCGCAGCTTCATTCTGGATGGTGTTTaGCTGGGTGATGGCATCCTCTCGCTTCCGTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: IWEGRSFILDGV*LGDGILSLPFL Trigger: AAGGAACGGAAGCGAGAGGATGCCATCACCCAGCAAAACACCATCCAGAATGAAGCTGCGACCCTCCCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095313.5 |
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| CDS CAA 90 bp | GGATATCTATTTGAGATTTCATCTTCTGGGGCACTGGTTGTGCTTTaGTATCTGCCTGGAACTGTTCTCGACGGGTCCTCCGCCGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: GYLFEISSSGALVVL*YLPGTVLDGSSAAG Trigger: CCCCGCGGCGGAGGACCCGTCGAGAACAGTTCCAGGCAGATACAAAAGCACAACCAGTGCCCCAGAAGATGAAATCTCAAATAGATATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218332.2 |
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| CDS CAA 72 bp | CTTGAGGAGAAACTAGCCGGCGCATTTGCATCTCTGTaGTGTCTACTGAAACCACTTCTGTCTGTTCGGGGA | + |
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Preference number: 6 (lower is better) Translates to: LEEKLAGAFASL*CLLKPLLSVRG Trigger: TCCCCGAACAGACAGAAGTGGTTTCAGTAGACACAACAGAGATGCAAATGCGCCGGCTAGTTTCTCCTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095313.5 ENSMUST00000218332.2 |
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| CDS CAA 90 bp | AAGGTGCTACTTGAGGAGAAACTAGCCGGCGCATTTGCATCTCTGTaGTGTCTACTGAAACCACTTCTGTCTGTTCGGGGATATCTATTT | + |
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Preference number: 6 (lower is better) Translates to: KVLLEEKLAGAFASL*CLLKPLLSVRGYLF Trigger: AAATAGATATCCCCGAACAGACAGAAGTGGTTTCAGTAGACACAACAGAGATGCAAATGCGCCGGCTAGTTTCTCCTCAAGTAGCACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095313.5 ENSMUST00000218332.2 |
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| CDS CAA 72 bp | GATATCTATTTGAGATTTCATCTTCTGGGGCACTGGTaGTGCTTTTGTATCTGCCTGGAACTGTTCTCGACG | + |
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Preference number: 6 (lower is better) Translates to: DIYLRFHLLGHW*CFCICLELFST Trigger: CGTCGAGAACAGTTCCAGGCAGATACAAAAGCACAACCAGTGCCCCAGAAGATGAAATCTCAAATAGATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095313.5 ENSMUST00000218332.2 |
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| CDS TCA 72 bp | TTCAAGATCTTCAATTCTCTTTTCCAAGGTGCTACTTaGGGAGAAACTAGCCGGCGCATTTGCATCTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: FKIFNSLFQGAT*GETSRRICISV Trigger: AACAGAGATGCAAATGCGCCGGCTAGTTTCTCCTCAAGTAGCACCTTGGAAAAGAGAATTGAAGATCTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095313.5 ENSMUST00000218332.2 |
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| CDS CAA 90 bp | CATTTCTTCTTTATCTTGCATCAGCCTCACAAGTCGAAGGTTTTCTaGCCTTTCTCTTACAACTTCCTTTTCAAGATCTTCAATTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: HFFFILHQPHKSKVF*PFSYNFLFKIFNSL Trigger: AAGAGAATTGAAGATCTTGAAAAGGAAGTTGTAAGAGAAAGGCAAGAAAACCTTCGACTTGTGAGGCTGATGCAAGATAAAGAAGAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095313.5 ENSMUST00000218332.2 |
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