Pregenerated sensors for PATE10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000091174

Ensembl transcript IDs: ENSMUST00000166746.2

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GTTTTTCTCAAACCTGATGAAGCGTACATACTCCACACATCTTCTTaGACAGCCCAAGACAGAATATTTGTACAGATATTCTCCAGTGTT	+
Preference number: 5 (lower is better) Translates to: VFLKPDEAYILHTSS*TAQDRIFVQIFSSV Trigger: AACACTGGAGAATATCTGTACAAATATTCTGTCTTGGGCTGTCCAAGAAGATGTGTGGAGTATGTACGCTTCATCAGGTTTGAGAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166746.2
CDS TCA 90 bp	ATATATACTTCTTTGGTTTGGCATGCAAAGTCAGGATATCTGGCATaGCAGACCCCCAAGTTTCTTGTACAGGTTTTGTCAATGTATTCA	+
Preference number: 5 (lower is better) Translates to: IYTSLVWHAKSGYLA*QTPKFLVQVLSMYS Trigger: TGAATACATTGACAAAACCTGTACAAGAAACTTGGGGGTCTGTCATGCCAGATATCCTGACTTTGCATGCCAAACCAAAGAAGTATATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166746.2
CDS TCA 90 bp	CAGCCCAAGACAGAATATTTGTACAGATATTCTCCAGTGTTAAGTTaGATATATACTTCTTTGGTTTGGCATGCAAAGTCAGGATATCTG	+
Preference number: 5 (lower is better) Translates to: QPKTEYLYRYSPVLS*IYTSLVWHAKSGYL Trigger: CAGATATCCTGACTTTGCATGCCAAACCAAAGAAGTATATATTCAACTTAACACTGGAGAATATCTGTACAAATATTCTGTCTTGGGCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166746.2
CDS TCA 72 bp	TCTTTGGTTTGGCATGCAAAGTCAGGATATCTGGCATaGCAGACCCCCAAGTTTCTTGTACAGGTTTTGTCA	+
Preference number: 6 (lower is better) Translates to: SLVWHAKSGYLA*QTPKFLVQVLS Trigger: TGACAAAACCTGTACAAGAAACTTGGGGGTCTGTCATGCCAGATATCCTGACTTTGCATGCCAAACCAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166746.2
CDS CAA 72 bp	AGTCAGGATATCTGGCATGACAGACCCCCAAGTTTCTaGTACAGGTTTTGTCAATGTATTCATCACAGGAAG	+
Preference number: 6 (lower is better) Translates to: SQDIWHDRPPSF*YRFCQCIHHRK Trigger: CTTCCTGTGATGAATACATTGACAAAACCTGTACAAGAAACTTGGGGGTCTGTCATGCCAGATATCCTGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166746.2
CDS GCA 72 bp	AGTGTTAAGTTGAATATATACTTCTTTGGTTTGGCATaGAAAGTCAGGATATCTGGCATGACAGACCCCCAA	+
Preference number: 6 (lower is better) Translates to: SVKLNIYFFGLA*KVRISGMTDPQ Trigger: TTGGGGGTCTGTCATGCCAGATATCCTGACTTTGCATGCCAAACCAAAGAAGTATATATTCAACTTAACACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166746.2
CDS CCA 72 bp	AAACCTGATGAAGCGTACATACTCCACACATCTTCTTaGACAGCCCAAGACAGAATATTTGTACAGATATTC	+
Preference number: 6 (lower is better) Translates to: KPDEAYILHTSS*TAQDRIFVQIF Trigger: GAATATCTGTACAAATATTCTGTCTTGGGCTGTCCAAGAAGATGTGTGGAGTATGTACGCTTCATCAGGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166746.2
CDS CAA 72 bp	TTCTCCAGTGTTAAGTTGAATATATACTTCTTTGGTTaGGCATGCAAAGTCAGGATATCTGGCATGACAGAC	+
Preference number: 6 (lower is better) Translates to: FSSVKLNIYFFG*ACKVRISGMTD Trigger: GTCTGTCATGCCAGATATCCTGACTTTGCATGCCAAACCAAAGAAGTATATATTCAACTTAACACTGGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166746.2
CDS CAA 90 bp	ACAGCCCAAGACAGAATATTTGTACAGATATTCTCCAGTGTTAAGTaGAATATATACTTCTTTGGTTTGGCATGCAAAGTCAGGATATCT	+
Preference number: 6 (lower is better) Translates to: TAQDRIFVQIFSSVK*NIYFFGLACKVRIS Trigger: AGATATCCTGACTTTGCATGCCAAACCAAAGAAGTATATATTCAACTTAACACTGGAGAATATCTGTACAAATATTCTGTCTTGGGCTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166746.2

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