Pregenerated sensors for PARVB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022438Ensembl transcript IDs: ENSMUST00000023072.7, ENSMUST00000122818.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGGCGGAGTCCCTGGAGCCAGGGCTGTTGCAGTAATTGCTCTGTaGGCTGGAGCACAGGTGGACAGCCCTCTCCAGCCGAGGGCTAGG | + |
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Preference number: 1 (lower is better) Translates to: WGGVPGARAVAVIAL*AGAQVDSPLQPRAR Trigger: CCTAGCCCTCGGCTGGAGAGGGCTGTCCACCTGTGCTCCAGCCCACAGAGCAATTACTGCAACAGCCCTGGCTCCAGGGACTCCGCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR GCA 90 bp | GGACAAATGGGGCGGAGTCCCTGGAGCCAGGGCTGTTGCAGTAATTaGTCTGTGGGCTGGAGCACAGGTGGACAGCCCTCTCCAGCCGAG | + |
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Preference number: 1 (lower is better) Translates to: GQMGRSPWSQGCCSN*SVGWSTGGQPSPAE Trigger: CTCGGCTGGAGAGGGCTGTCCACCTGTGCTCCAGCCCACAGAGCAATTACTGCAACAGCCCTGGCTCCAGGGACTCCGCCCCATTTGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 90 bp | AGGTGGCACAAGAGCTGCCTGCAGGTCCACAGAAGGCTGGAGAGCTaGAGGGGATGTGCCAATCAGGGCAGGGCAGAAGGGAGGAACCCA | + |
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Preference number: 1 (lower is better) Translates to: RWHKSCLQVHRRLES*RGCANQGRAEGRNP Trigger: TGGGTTCCTCCCTTCTGCCCTGCCCTGATTGGCACATCCCCTCCAGCTCTCCAGCCTTCTGTGGACCTGCAGGCAGCTCTTGTGCCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 90 bp | GAGTGTGAAGGTGGCACAAGAGCTGCCTGCAGGTCCACAGAAGGCTaGAGAGCTGGAGGGGATGTGCCAATCAGGGCAGGGCAGAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: ECEGGTRAACRSTEG*RAGGDVPIRAGQKG Trigger: TCCCTTCTGCCCTGCCCTGATTGGCACATCCCCTCCAGCTCTCCAGCCTTCTGTGGACCTGCAGGCAGCTCTTGTGCCACCTTCACACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR GCA 90 bp | TCTGCCTCAGGCAAAGGAGCCTGCTTACATTCCAAGCAGGACTTGTaGCCTCCAGATAGGGAACCCCAGGAAGCCACCGCCCGTCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: SASGKGACLHSKQDL*PPDREPQEATARPR Trigger: TCTGGGACGGGCGGTGGCTTCCTGGGGTTCCCTATCTGGAGGGCACAAGTCCTGCTTGGAATGTAAGCAGGCTCCTTTGCCTGAGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 90 bp | GAATGGCAGCTCCGCAGTGAAGGGACGGTAAGGCCAGCCCTTCACTaGTGTGTGAGAACCACACCTCCACGCTCAGTCAATGGGGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: EWQLRSEGTVRPALH*CVRTTPPRSVNGGG Trigger: ACCTCCCCCATTGACTGAGCGTGGAGGTGTGGTTCTCACACACCAGTGAAGGGCTGGCCTTACCGTCCCTTCACTGCGGAGCTGCCATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR GCA 90 bp | CTCAGGACTTGCACAACTGAGTGTGAAGGTGGCACAAGAGCTGCCTaGAGGTCCACAGAAGGCTGGAGAGCTGGAGGGGATGTGCCAATC | + |
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Preference number: 1 (lower is better) Translates to: LRTCTTECEGGTRAA*RSTEGWRAGGDVPI Trigger: GATTGGCACATCCCCTCCAGCTCTCCAGCCTTCTGTGGACCTGCAGGCAGCTCTTGTGCCACCTTCACACTCAGTTGTGCAAGTCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 90 bp | AGCCCTTCACTGGTGTGTGAGAACCACACCTCCACGCTCAGTCAATaGGGGAGGTCACACCTTCATAGAACCCTGGCTTCCCAAGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: SPSLVCENHTSTLSQ*GRSHLHRTLASQVL Trigger: CAGAACTTGGGAAGCCAGGGTTCTATGAAGGTGTGACCTCCCCCATTGACTGAGCGTGGAGGTGTGGTTCTCACACACCAGTGAAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR GCA 90 bp | GTGGGAATCAGGAAAGGAAGGTTTCCTGTAAGCTGCCATGAACAGTaGTGTAAGGCAGGTGAGAGGCAGGAGGAACGTGAGAAGGGGGTG | + |
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Preference number: 1 (lower is better) Translates to: VGIRKGRFPVSCHEQ*CKAGERQEEREKGV Trigger: CACCCCCTTCTCACGTTCCTCCTGCCTCTCACCTGCCTTACAGCACTGTTCATGGCAGCTTACAGGAAACCTTCCTTTCCTGATTCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR TCA 90 bp | TGTCTTCAGGGTGAATGTCCACCAAAGCCGGGGCCATTGGAGAGTTaGTGGCGCTCTTGCCTTCTTCCTGTAAGTCAGTCACAAGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: CLQGECPPKPGPLES*WRSCLLPVSQSQGR Trigger: TCTGCCTTGTGACTGACTTACAGGAAGAAGGCAAGAGCGCCATCAACTCTCCAATGGCCCCGGCTTTGGTGGACATTCACCCTGAAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122818.2 |
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| 3UTR CCA 90 bp | TATAGGTCATGCTGTAGGGGATACCAGCAGTGTCTAGGAGGGATGTaGACATCTCTTAGGTCCCACTGCCAGCTGAGACACAGCCCACAA | + |
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Preference number: 1 (lower is better) Translates to: YRSCCRGYQQCLGGM*TSLRSHCQLRHSPQ Trigger: TTGTGGGCTGTGTCTCAGCTGGCAGTGGGACCTAAGAGATGTCCACATCCCTCCTAGACACTGCTGGTATCCCCTACAGCATGACCTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR GCA 90 bp | TCTTGTGGTAAGGTGGGAATCAGGAAAGGAAGGTTTCCTGTAAGCTaGCATGAACAGTGCTGTAAGGCAGGTGAGAGGCAGGAGGAACGT | + |
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Preference number: 1 (lower is better) Translates to: SCGKVGIRKGRFPVS*HEQCCKAGERQEER Trigger: ACGTTCCTCCTGCCTCTCACCTGCCTTACAGCACTGTTCATGGCAGCTTACAGGAAACCTTCCTTTCCTGATTCCCACCTTACCACAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR-3UTR TCA 90 bp | CCTGAGACAAGGAGCCAGCCGGCCATGGCACCACCTCCAGAGTCAAGGGAAGTGACTCCAAGCCGGCTCTaGAGCTGCACATTCAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: PETRSQPAMAPPPESREVTPSRL*SCTFRA Trigger: GGCTCTGAATGTGCAGCTTCAGAGCCGGCTTGGAGT...CACTTCCCTTGACTCTGGAGGTGGTGCCATGGCCGGCTGGCTCCTTGTCTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CAA 90 bp | AGTTCTGCCTCAGGCAAAGGAGCCTGCTTACATTCCAAGCAGGACTaGTGCCCTCCAGATAGGGAACCCCAGGAAGCCACCGCCCGTCCC | + |
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Preference number: 2 (lower is better) Translates to: SSASGKGACLHSKQD*CPPDREPQEATARP Trigger: GGGACGGGCGGTGGCTTCCTGGGGTTCCCTATCTGGAGGGCACAAGTCCTGCTTGGAATGTAAGCAGGCTCCTTTGCCTGAGGCAGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR-3UTR TCA 90 bp | CCTCACCCCACAGCCCTGGGTCTTGTGGTAAGGTGGGAATCAGGAAAGGAAGGTGGAGGGGTGGCTTGCTaGCATCATGGGGTCAGCGAG | + |
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Preference number: 2 (lower is better) Translates to: PHPTALGLVVRWESGKEGGGVAC*HHGVSE Trigger: CTCGCTGACCCCATGATGTCAGCAAGCCACCCCTCC...ACCTTCCTTTCCTGATTCCCACCTTACCACAAGACCCAGGGCTGTGGGGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CAA 90 bp | CCCGTCCCAGACCAATTCTTTCCCTCCCTTCAGCACGGTAGGTCTTaGCATCTAGGATCCCCGCCCCAGACCGCCTGTGAGCAGAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: PVPDQFFPSLQHGRS*HLGSPPQTACEQSK Trigger: TTTGCTCTGCTCACAGGCGGTCTGGGGCGGGGATCCTAGATGCAAAGACCTACCGTGCTGAAGGGAGGGAAAGAATTGGTCTGGGACGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR-3UTR GCA 90 bp | ACACACGGCCTCTGTAATTCTGGCTGCTCGCTGGTAGCCTGTGGTCAGGCAGCCTGGAGCCAGGGCTGTTaGAGTAATTGCTCTGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: THGLCNSGCSLVACGQAAWSQGC*SNCSVG Trigger: GCCCACAGAGCAATTACTGCAACAGCCCTGGCTCCA...GGCTGCCTGACCACAGGCTACCAGCGAGCAGCCAGAATTACAGAGGCCGTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR-3UTR GCA 90 bp | CCTGAGACAAGGAGCCAGCCGGCCATGGCACCACCTCCAGAGTCAAGGGAAGTGCTCTGTAATTCTGGCTaGTCGCTGGTAGCCTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: PETRSQPAMAPPPESREVLCNSG*SLVACG Trigger: ACCACAGGCTACCAGCGAGCAGCCAGAATTACAGAG...CACTTCCCTTGACTCTGGAGGTGGTGCCATGGCCGGCTGGCTCCTTGTCTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR-3UTR GCA 90 bp | CCTGAGACAAGGAGCCAGCCGGCCATGGCACCACCTCCAGAGTCAAGGGAAGTGTTCTCTTATAGGTCATaGTGTAGGGGATACCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PETRSQPAMAPPPESREVFSYRS*CRGYQQ Trigger: CTGCTGGTATCCCCTACAGCATGACCTATAAGAGAA...CACTTCCCTTGACTCTGGAGGTGGTGCCATGGCCGGCTGGCTCCTTGTCTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR-3UTR GCA 90 bp | GGACAAATGGGGCGGAGTCCCTGGAGCCAGGGCTGTTGCAGTAATTGCTCTGTGGCTAGGCTGGGCCTTTaGTCTTTTTCATCTTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GQMGRSPWSQGCCSNCSVARLGL*SFSSFS Trigger: GGAGAAAGATGAAAAAGAGCAAAGGCCCAGCCTAGC...CACAGAGCAATTACTGCAACAGCCCTGGCTCCAGGGACTCCGCCCCATTTGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR-3UTR CCA 90 bp | CCCAGATACTGCTGTGGTTCTGTGTCTGCGAGGAAGGCAGCACAGAACCTTCCAGGCCCCAAGGCATTCTaGGTCCTGAGAGTTCATGTA | + |
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Preference number: 2 (lower is better) Translates to: PRYCCGSVSARKAAQNLPGPKAF*VLRVHV Trigger: TACATGAACTCTCAGGACCCAGAATGCCTTGGGGCC...TGGAAGGTTCTGTGCTGCCTTCCTCGCAGACACAGAACCACAGCAGTATCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR-3UTR CCA 90 bp | CCTCACCCCACAGCCCTGGGTCTTGTGGTAAGGTGGGAATCAGGAAAGGAAGGTAGGTCATGCAGGGGATaGTTCCACTGTGGAATGAAG | + |
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Preference number: 2 (lower is better) Translates to: PHPTALGLVVRWESGKEGRSCRG*FHCGMK Trigger: CTTCATTCCACAGTGGAACCATCCCCTGCATGACCT...ACCTTCCTTTCCTGATTCCCACCTTACCACAAGACCCAGGGCTGTGGGGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR-3UTR CCA 90 bp | CCTCACCCCACAGCCCTGGGTCTTGTGGTAAGGTGGGAATCAGGAAAGGAAGGTTGTCTAGGAGGGATGTaGACATCTCTTAGGTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: PHPTALGLVVRWESGKEGCLGGM*TSLRSH Trigger: GTGGGACCTAAGAGATGTCCACATCCCTCCTAGACA...ACCTTCCTTTCCTGATTCCCACCTTACCACAAGACCCAGGGCTGTGGGGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR-3UTR TCA 90 bp | GGTGTGAAGGCAGAGAAAGGCAGCCTGCCAGCACCTCCACCTTCTACCCTCAGCTCTGAGACTCAGGAGTaGAAAACTGAGAGGATCTTT | + |
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Preference number: 2 (lower is better) Translates to: GVKAEKGSLPAPPPSTLSSETQE*KTERIF Trigger: AAAGATCCTCTCAGTTTTTCACTCCTGAGTCTCAGA...GCTGAGGGTAGAAGGTGGAGGTGCTGGCAGGCTGCCTTTCTCTGCCTTCACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR-3UTR CCA 90 bp | GGACAAATGGGGCGGAGTCCCTGGAGCCAGGGCTGTTGCAGTAATTGCTCTGTGAAAGCAAGGACTGTGTaGATGGATACACCCATTTTT | + |
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Preference number: 2 (lower is better) Translates to: GQMGRSPWSQGCCSNCSVKARTV*MDTPIF Trigger: AAAAATGGGTGTATCCATCCACACAGTCCTTGCTTT...CACAGAGCAATTACTGCAACAGCCCTGGCTCCAGGGACTCCGCCCCATTTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR-3UTR GCA 90 bp | TTACTTCAAACAATTAAAAAGACAATAAAGCGCGGCCGCACAGGGGACGTAACGAGGTGGCACAAGAGCTaGCTGCAGGTCCACAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LLQTIKKTIKRGRTGDVTRWHKS*LQVHRR Trigger: CCTTCTGTGGACCTGCAGGCAGCTCTTGTGCCACCT...CGTTACGTCCCCTGTGCGGCCGCGCTTTATTGTCTTTTTAATTGTTTGAAGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR-3UTR CCA 90 bp | GACCCCATGGAAGTGACAGATGATGACATTTCTAAGAGTTTTAGTGGCCAGACCATACACCCATTTTTCTaGCCTAGCACTTGTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: DPMEVTDDDISKSFSGQTIHPFF*PSTCPW Trigger: CCAGGGACAAGTGCTAGGCCAGAAAAATGGGTGTAT...GGTCTGGCCACTAAAACTCTTAGAAATGTCATCATCTGTCACTTCCATGGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR-3UTR TCA 90 bp | TTACTTCAAACAATTAAAAAGACAATAAAGCGCGGCCGCACAGGGGACGTAACGGAGAAAAAGAAGAAGTaGGGCCTTAAACTTAAACGG | + |
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Preference number: 2 (lower is better) Translates to: LLQTIKKTIKRGRTGDVTEKKKK*GLKLKR Trigger: CCGTTTAAGTTTAAGGCCTCACTTCTTCTTTTTCTC...CGTTACGTCCCCTGTGCGGCCGCGCTTTATTGTCTTTTTAATTGTTTGAAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 72 bp | CCAATCAGGGCAGGGCAGAAGGGAGGAACCCAGTCCTaGCCTGCAGACCTGGGGGCAGGGGGTGCAGACCTG | + |
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Preference number: 3 (lower is better) Translates to: PIRAGQKGGTQS*PADLGAGGADL Trigger: CAGGTCTGCACCCCCTGCCCCCAGGTCTGCAGGCCAGGACTGGGTTCCTCCCTTCTGCCCTGCCCTGATTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR TCA 72 bp | GGTGGGGGTGGGGGTGAACCACAGAAGCAGGATTCCTaGGACAAGGAGCCAGCCGGCCATGGCACCACCTCC | + |
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Preference number: 3 (lower is better) Translates to: GGGGGEPQKQDS*DKEPAGHGTTS Trigger: GGAGGTGGTGCCATGGCCGGCTGGCTCCTTGTCTCAGGAATCCTGCTTCTGTGGTTCACCCCCACCCCCACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR GCA 72 bp | GGGCGGAGTCCCTGGAGCCAGGGCTGTTGCAGTAATTaGTCTGTGGGCTGGAGCACAGGTGGACAGCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: GRSPWSQGCCSN*SVGWSTGGQPS Trigger: AGAGGGCTGTCCACCTGTGCTCCAGCCCACAGAGCAATTACTGCAACAGCCCTGGCTCCAGGGACTCCGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 72 bp | TGGAGCCAGGGCTGTTGCAGTAATTGCTCTGTGGGCTaGAGCACAGGTGGACAGCCCTCTCCAGCCGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: WSQGCCSNCSVG*STGGQPSPAEG Trigger: GCCCTCGGCTGGAGAGGGCTGTCCACCTGTGCTCCAGCCCACAGAGCAATTACTGCAACAGCCCTGGCTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 72 bp | GTCCCTGGAGCCAGGGCTGTTGCAGTAATTGCTCTGTaGGCTGGAGCACAGGTGGACAGCCCTCTCCAGCCG | + |
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Preference number: 3 (lower is better) Translates to: VPGARAVAVIAL*AGAQVDSPLQP Trigger: CGGCTGGAGAGGGCTGTCCACCTGTGCTCCAGCCCACAGAGCAATTACTGCAACAGCCCTGGCTCCAGGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 72 bp | AAGGAGAGGCCAGCCCAGGGGATTCCTGAGGACAAATaGGGCGGAGTCCCTGGAGCCAGGGCTGTTGCAGTA | + |
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Preference number: 3 (lower is better) Translates to: KERPAQGIPEDK*GGVPGARAVAV Trigger: TACTGCAACAGCCCTGGCTCCAGGGACTCCGCCCCATTTGTCCTCAGGAATCCCCTGGGCTGGCCTCTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 72 bp | AAGAGCTGCCTGCAGGTCCACAGAAGGCTGGAGAGCTaGAGGGGATGTGCCAATCAGGGCAGGGCAGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: KSCLQVHRRLES*RGCANQGRAEG Trigger: CCCTTCTGCCCTGCCCTGATTGGCACATCCCCTCCAGCTCTCCAGCCTTCTGTGGACCTGCAGGCAGCTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR GCA 72 bp | GGACAAATGGGGCGGAGTCCCTGGAGCCAGGGCTGTTaGAGTAATTGCTCTGTGGGCTGGAGCACAGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: GQMGRSPWSQGC*SNCSVGWSTGG Trigger: TCCACCTGTGCTCCAGCCCACAGAGCAATTACTGCAACAGCCCTGGCTCCAGGGACTCCGCCCCATTTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 72 bp | CACTGCCAGCTGAGACACAGCCCACAAACCAATTCCTaGCTGGTCGGAGGGAGGCTGCATTTGGCGACTGGG | + |
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Preference number: 3 (lower is better) Translates to: HCQLRHSPQTNS*LVGGRLHLATG Trigger: CCCAGTCGCCAAATGCAGCCTCCCTCCGACCAGCCAGGAATTGGTTTGTGGGCTGTGTCTCAGCTGGCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 72 bp | GAAGCAGGATTCCTGAGACAAGGAGCCAGCCGGCCATaGCACCACCTCCAGAGTCAAGGGAAGTGGGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: EAGFLRQGASRP*HHLQSQGKWVV Trigger: CACCACCCACTTCCCTTGACTCTGGAGGTGGTGCCATGGCCGGCTGGCTCCTTGTCTCAGGAATCCTGCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR GCA 72 bp | GGCAAAGGAGCCTGCTTACATTCCAAGCAGGACTTGTaGCCTCCAGATAGGGAACCCCAGGAAGCCACCGCC | + |
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Preference number: 3 (lower is better) Translates to: GKGACLHSKQDL*PPDREPQEATA Trigger: GGCGGTGGCTTCCTGGGGTTCCCTATCTGGAGGGCACAAGTCCTGCTTGGAATGTAAGCAGGCTCCTTTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 72 bp | ATAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAATaGTGTGAAGGCAGAGAAAGGCAGCCTGCCAGCACC | + |
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Preference number: 3 (lower is better) Translates to: IEEEEEEEEEEE*CEGRERQPAST Trigger: GGTGCTGGCAGGCTGCCTTTCTCTGCCTTCACACCATTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 72 bp | AGCCGGCCATGGCACCACCTCCAGAGTCAAGGGAAGTaGGTGGTGAAGGGCTTGAGGGAGCAGCAGGATTTT | + |
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Preference number: 3 (lower is better) Translates to: SRPWHHLQSQGK*VVKGLREQQDF Trigger: AAAATCCTGCTGCTCCCTCAAGCCCTTCACCACCCACTTCCCTTGACTCTGGAGGTGGTGCCATGGCCGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR GCA 72 bp | CAGAGCAGTCAGACACACGGCCTCTGTAATTCTGGCTaGTCGCTGGTAGCCTGTGGTCAGGCAGCCCTTGTA | + |
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Preference number: 3 (lower is better) Translates to: QSSQTHGLCNSG*SLVACGQAALV Trigger: TACAAGGGCTGCCTGACCACAGGCTACCAGCGAGCAGCCAGAATTACAGAGGCCGTGTGTCTGACTGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR GCA 72 bp | TGCACAACTGAGTGTGAAGGTGGCACAAGAGCTGCCTaGAGGTCCACAGAAGGCTGGAGAGCTGGAGGGGAT | + |
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Preference number: 3 (lower is better) Translates to: CTTECEGGTRAA*RSTEGWRAGGD Trigger: ATCCCCTCCAGCTCTCCAGCCTTCTGTGGACCTGCAGGCAGCTCTTGTGCCACCTTCACACTCAGTTGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 72 bp | GAGCAAAGCGGTCCCAGCAGCTCCCAGATACTGCTGTaGTTCTGTGTCTGCGAGGAAGGCAGCACAGAACCT | + |
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Preference number: 3 (lower is better) Translates to: EQSGPSSSQILL*FCVCEEGSTEP Trigger: AGGTTCTGTGCTGCCTTCCTCGCAGACACAGAACCACAGCAGTATCTGGGAGCTGCTGGGACCGCTTTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 72 bp | CTCCGCAGTGAAGGGACGGTAAGGCCAGCCCTTCACTaGTGTGTGAGAACCACACCTCCACGCTCAGTCAAT | + |
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Preference number: 3 (lower is better) Translates to: LRSEGTVRPALH*CVRTTPPRSVN Trigger: ATTGACTGAGCGTGGAGGTGTGGTTCTCACACACCAGTGAAGGGCTGGCCTTACCGTCCCTTCACTGCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR GCA 72 bp | AATGAGGAAGGATGCAGGGGGCCTGAGCTCAGGACTTaGACAACTGAGTGTGAAGGTGGCACAAGAGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: NEEGCRGPELRT*TTECEGGTRAA Trigger: GGCAGCTCTTGTGCCACCTTCACACTCAGTTGTGCAAGTCCTGAGCTCAGGCCCCCTGCATCCTTCCTCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 72 bp | CAGGGAAGCCTGAGGCCTCCCCAGGGAGGTGTTTTCTaGGAAAGCAAGGACTGTGTGGATGGATACACCCAT | + |
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Preference number: 3 (lower is better) Translates to: QGSLRPPQGGVF*ESKDCVDGYTH Trigger: ATGGGTGTATCCATCCACACAGTCCTTGCTTTCCCAGAAAACACCTCCCTGGGGAGGCCTCAGGCTTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR GCA 72 bp | CCTGGCTTCCCAAGTTCTGCCTCAGGCAAAGGAGCCTaGTTACATTCCAAGCAGGACTTGTGCCCTCCAGAT | + |
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Preference number: 3 (lower is better) Translates to: PGFPSSASGKGA*LHSKQDLCPPD Trigger: ATCTGGAGGGCACAAGTCCTGCTTGGAATGTAAGCAGGCTCCTTTGCCTGAGGCAGAACTTGGGAAGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| 3UTR CCA 72 bp | TCAGTCAATGGGGGAGGTCACACCTTCATAGAACCCTaGCTTCCCAAGTTCTGCCTCAGGCAAAGGAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SVNGGGHTFIEP*LPKFCLRQRSL Trigger: CAGGCTCCTTTGCCTGAGGCAGAACTTGGGAAGCCAGGGTTCTATGAAGGTGTGACCTCCCCCATTGACTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| 3UTR TCA 72 bp | GGTGAATGTCCACCAAAGCCGGGGCCATTGGAGAGTTaGTGGCGCTCTTGCCTTCTTCCTGTAAGTCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GECPPKPGPLES*WRSCLLPVSQS Trigger: TGACTGACTTACAGGAAGAAGGCAAGAGCGCCATCAACTCTCCAATGGCCCCGGCTTTGGTGGACATTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122818.2 |
||
| 3UTR CCA 72 bp | AAGTCAGTCACAAGGCAGACTGGGAATGAAATCTGCTaGTCGCTCGAAGCGGCAGAACAAGCCTGGTCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: KSVTRQTGNEIC*SLEAAEQAWSS Trigger: GCTTGACCAGGCTTGTTCTGCCGCTTCGAGCGACCAGCAGATTTCATTCCCAGTCTGCCTTGTGACTGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122818.2 |
||
| 3UTR-3UTR CAA 90 bp | GACCCCATGGAAGTGACAGATGATGACATTTCTAAGAGTTTTAGTGGCCAGACCGGAGGGAGGGGTGGCTaGCTGACATCATGGGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: DPMEVTDDDISKSFSGQTGGRGG*LTSWGQ Trigger: CTGACCCCATGATGTCAGCAAGCCACCCCTCCCTCC...GGTCTGGCCACTAAAACTCTTAGAAATGTCATCATCTGTCACTTCCATGGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| 3UTR GCA 72 bp | AGGAAAGGAAGGTTTCCTGTAAGCTGCCATGAACAGTaGTGTAAGGCAGGTGAGAGGCAGGAGGAACGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RKGRFPVSCHEQ*CKAGERQEERE Trigger: CTCACGTTCCTCCTGCCTCTCACCTGCCTTACAGCACTGTTCATGGCAGCTTACAGGAAACCTTCCTTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| 3UTR GCA 72 bp | AGACACGGTAATGCCATTTTAATTATCTCTCTCCCCTaGTGGGAAGCCTCCTCCACCGGAGCGGCTATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RHGNAILIISLP*WEASSTGAAIP Trigger: TGGAATAGCCGCTCCGGTGGAGGAGGCTTCCCAGCAGGGGAGAGAGATAATTAAAATGGCATTACCGTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| 3UTR GCA 72 bp | GGTCACACCTTCATAGAACCCTGGCTTCCCAAGTTCTaGCTCAGGCAAAGGAGCCTGCTTACATTCCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GHTFIEPWLPKF*LRQRSLLTFQA Trigger: TGCTTGGAATGTAAGCAGGCTCCTTTGCCTGAGGCAGAACTTGGGAAGCCAGGGTTCTATGAAGGTGTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| 3UTR GCA 72 bp | TGTAAGTCAGTCACAAGGCAGACTGGGAATGAAATCTaGTGGTCGCTCGAAGCGGCAGAACAAGCCTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CKSVTRQTGNEI*WSLEAAEQAWS Trigger: TGACCAGGCTTGTTCTGCCGCTTCGAGCGACCAGCAGATTTCATTCCCAGTCTGCCTTGTGACTGACTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122818.2 |
||
| 3UTR CCA 72 bp | CACGGTAATGCCATTTTAATTATCTCTCTCCCCTGCTaGGAAGCCTCCTCCACCGGAGCGGCTATTCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HGNAILIISLPC*EASSTGAAIPR Trigger: TCTTGGAATAGCCGCTCCGGTGGAGGAGGCTTCCCAGCAGGGGAGAGAGATAATTAAAATGGCATTACCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| 3UTR CCA 72 bp | GCACAGAACCTTCCAGTCCCGGGTATTTTGTCAGTGTaGCTCTTTAATGTCACCGCATCCCACAGGGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: AQNLPVPGILSV*LFNVTASHRET Trigger: TGTCTCCCTGTGGGATGCGGTGACATTAAAGAGCCACACTGACAAAATACCCGGGACTGGAAGGTTCTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| 3UTR CCA 72 bp | AAGCAAGGACTGTGTGGATGGATACACCCATTTTTCTaGCCTAGCACTTGTCCCTGGAGGATCAGTTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KQGLCGWIHPFF*PSTCPWRISCS Trigger: GGAGCAACTGATCCTCCAGGGACAAGTGCTAGGCCAGAAAAATGGGTGTATCCATCCACACAGTCCTTGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| 3UTR CCA 72 bp | GGGAGGTGTTTTCTGGGAAAGCAAGGACTGTGTGGATaGATACACCCATTTTTCTGGCCTAGCACTTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GRCFLGKQGLCG*IHPFFWPSTCP Trigger: GGGACAAGTGCTAGGCCAGAAAAATGGGTGTATCCATCCACACAGTCCTTGCTTTCCCAGAAAACACCTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR GCA 90 bp | CCCCTGCTGGGAAGCCTCCTCCACCGGAGCGGCTATTCCAAGACCCGTCCCCAGCGAACGACCACCACCTaGACGGTGACATGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLLGSLLHRSGYSKTRPQRTTTT*TVTCSG Trigger: TCCTGAGCATGTCACCGTGCAGGTGGTGGTCGTTCG...CTGGGGACGGGTCTTGGAATAGCCGCTCCGGTGGAGGAGGCTTCCCAGCAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR GCA 90 bp | CCCCTGCTGGGAAGCCTCCTCCACCGGAGCGGCTATTCCAAGACCCGTCCCCAGAGGTCCTCCTCCAGCTaGTTCACAATGATGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLGSLLHRSGYSKTRPQRSSSS*FTMMRS Trigger: GGAGCGCATCATTGTGAAGCAGCTGGAGGAGGACCT...CTGGGGACGGGTCTTGGAATAGCCGCTCCGGTGGAGGAGGCTTCCCAGCAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR GCA 90 bp | ACACACGGCCTCTGTAATTCTGGCTGCTCGCTGGTAGCCTGTGGTCAGGCAGCCATGGGGGCCCTGAAGTaGATGGCCAGGGAGACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: THGLCNSGCSLVACGQAAMGALK*MARETR Trigger: CCTCGTCTCCCTGGCCATGCACTTCAGGGCCCCCAT...GGCTGCCTGACCACAGGCTACCAGCGAGCAGCCAGAATTACAGAGGCCGTGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR TCA 90 bp | CCTGAGACAAGGAGCCAGCCGGCCATGGCACCACCTCCAGAGTCAAGGGAAGTGCCAGCTGCTTCACAATaGTGCGCTCCTCTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PETRSQPAMAPPPESREVPAASQ*CAPLPA Trigger: TGCTGGCAGAGGAGCGCATCATTGTGAAGCAGCTGG...CACTTCCCTTGACTCTGGAGGTGGTGCCATGGCCGGCTGGCTCCTTGTCTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR CCA 90 bp | AGTCAGTCACAAGGCAGACTGGGAATGAAATCTGCTGGTCGCTCGAAGCGGCAGCGTCCTTCTTCATCTTaGGGGCCCGCGGGGTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SQSQGRLGMKSAGRSKRQRPSSS*GPAGWA Trigger: CGCCCACCCCGCGGGCCCCCAAGATGAAGAAGGACG...CTGCCGCTTCGAGCGACCAGCAGATTTCATTCCCAGTCTGCCTTGTGACTGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122818.2 |
||
| CDS-3UTR TCA 90 bp | AGGCTATGGTATGAATGGCAGCTCCGCAGTGAAGGGACGGTAAGGCCAGCCCTTGGTGAATGGGGGCCCTaGAGTGCATGGCCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLWYEWQLRSEGTVRPALGEWGP*SAWPGR Trigger: TCTCCCTGGCCATGCACTTCAGGGCCCCCATTCACC...AAGGGCTGGCCTTACCGTCCCTTCACTGCGGAGCTGCCATTCATACCATAGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR TCA 90 bp | ACACACGGCCTCTGTAATTCTGGCTGCTCGCTGGTAGCCTGTGGTCAGGCAGCCCCACCACCTGCACGGTaGCATGCTCAGGAAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: THGLCNSGCSLVACGQAAPPPAR*HAQEGE Trigger: TTCACCTTCCTGAGCATGTCACCGTGCAGGTGGTGG...GGCTGCCTGACCACAGGCTACCAGCGAGCAGCCAGAATTACAGAGGCCGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR GCA 90 bp | GACAAATGGGGCGGAGTCCCTGGAGCCAGGGCTGTTGCAGTAATTGCTCTGTGGGAGATGTGGCTGGAGTaGAGCAAGCCTTCTCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DKWGGVPGARAVAVIALWEMWLE*SKPSRF Trigger: GAAGCGAGAAGGCTTGCTGCACTCCAGCCACATCTC...CCACAGAGCAATTACTGCAACAGCCCTGGCTCCAGGGACTCCGCCCCATTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| 3UTR CAA 72 bp | GACCAATTCTTTCCCTCCCTTCAGCACGGTAGGTCTTaGCATCTAGGATCCCCGCCCCAGACCGCCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DQFFPSLQHGRS*HLGSPPQTACE Trigger: CTCACAGGCGGTCTGGGGCGGGGATCCTAGATGCAAAGACCTACCGTGCTGAAGGGAGGGAAAGAATTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| 3UTR CAA 72 bp | TCAGGCAAAGGAGCCTGCTTACATTCCAAGCAGGACTaGTGCCCTCCAGATAGGGAACCCCAGGAAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SGKGACLHSKQD*CPPDREPQEAT Trigger: GGTGGCTTCCTGGGGTTCCCTATCTGGAGGGCACAAGTCCTGCTTGGAATGTAAGCAGGCTCCTTTGCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR GCA 90 bp | CATGGGGTCAGCGAGGTCATGCAGGGGATGGTTCCACTGTGGAATGAAGAGGAGGGTCTTCTTCTTCCTTaGCAGTGTGCCGCCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: HGVSEVMQGMVPLWNEEEGLLLP*QCAAQL Trigger: AAGTTGGGCGGCACACTGGCAAGGAAGAAGAAGACC...CTCCTCTTCATTCCACAGTGGAACCATCCCCTGCATGACCTCGCTGACCCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR GCA 90 bp | GTCTTCAGGGTGAATGTCCACCAAAGCCGGGGCCATTGGAGAGTTGATGGCGCTGGTCTTCTTCTTCCTTaGCAGTGTGCCGCCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: VFRVNVHQSRGHWRVDGAGLLLP*QCAAQL Trigger: AAGTTGGGCGGCACACTGGCAAGGAAGAAGAAGACC...AGCGCCATCAACTCTCCAATGGCCCCGGCTTTGGTGGACATTCACCCTGAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122818.2 |
||
| CDS-3UTR CCA 90 bp | TTACTTCAAACAATTAAAAAGACAATAAAGCGCGGCCGCACAGGGGACGTAACGCGTCCTTCTTCATCTTaGGGGCCCGCGGGGTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLQTIKKTIKRGRTGDVTRPSSS*GPAGWA Trigger: CGCCCACCCCGCGGGCCCCCAAGATGAAGAAGGACG...CGTTACGTCCCCTGTGCGGCCGCGCTTTATTGTCTTTTTAATTGTTTGAAGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR CCA 90 bp | TCCACCAAAGCCGGGGCCATTGGAGAGTTGATGGCGCTCTTGCCTTCTTCCTGTAAAGCGGTTCCTCCCTaGTCTTCTTCTTCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: STKAGAIGELMALLPSSCKAVPP*SSSSLP Trigger: TGGCAAGGAAGAAGAAGACCAGGGAGGAACCGCTTT...ACAGGAAGAAGGCAAGAGCGCCATCAACTCTCCAATGGCCCCGGCTTTGGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122818.2 |
||
| 3UTR CAA 72 bp | ACCAAAGCCGGGGCCATTGGAGAGTTGATGGCGCTCTaGCCTTCTTCCTGTAAGTCAGTCACAAGGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: TKAGAIGELMAL*PSSCKSVTRQT Trigger: AGTCTGCCTTGTGACTGACTTACAGGAAGAAGGCAAGAGCGCCATCAACTCTCCAATGGCCCCGGCTTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122818.2 |
||
| CDS-3UTR GCA 90 bp | GACCCCATGGAAGTGACAGATGATGACATTTCTAAGAGTTTTAGTGGCCAGACCGGCCGAAGCAGGTCTTaGACGGCTTCCAGAACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: DPMEVTDDDISKSFSGQTGRSRS*TASRTV Trigger: GACGGTTCTGGAAGCCGTGCAAGACCTGCTTCGGCC...GGTCTGGCCACTAAAACTCTTAGAAATGTCATCATCTGTCACTTCCATGGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR TCA 90 bp | GTCCTGAGAGTTCATGTAAAAGGTCCGTTAAAAGCAGCAAACCGCAAGACGGATACATGCTCAGGAAGGTaGATGGGGGCCCTGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLRVHVKGPLKAANRKTDTCSGR*MGALKC Trigger: GCACTTCAGGGCCCCCATTCACCTTCCTGAGCATGT...ATCCGTCTTGCGGTTTGCTGCTTTTAACGGACCTTTTACATGAACTCTCAGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR TCA 90 bp | GACCCCATGGAAGTGACAGATGATGACATTTCTAAGAGTTTTAGTGGCCAGACCCAAACCGGCCCATCATaGTCTCTGTGGTCGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DPMEVTDDDISKSFSGQTQTGPS*SLWSWS Trigger: TGACCACGACCACAGAGATCATGATGGGCCGGTTTG...GGTCTGGCCACTAAAACTCTTAGAAATGTCATCATCTGTCACTTCCATGGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR TCA 90 bp | AGGTGTTTTCTGGGAAAGCAAGGACTGTGTGGATGGATACACCCATTTTTCTGGACTTCTTCACAAGGTTaGGCTTGTCCGGGGCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RCFLGKQGLCGWIHPFFWTSSQG*ACPGRG Trigger: ACCACGCCCCGGACAAGCTCAACCTTGTGAAGAAGT...CCAGAAAAATGGGTGTATCCATCCACACAGTCCTTGCTTTCCCAGAAAACACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR GCA 90 bp | GACCCCATGGAAGTGACAGATGATGACATTTCTAAGAGTTTTAGTGGCCAGACCGGACTGCGTCACCTCTaGCACATTCAGCTTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DPMEVTDDDISKSFSGQTGLRHL*HIQLAV Trigger: CACTGCAAGCTGAATGTGGCAGAGGTGACGCAGTCC...GGTCTGGCCACTAAAACTCTTAGAAATGTCATCATCTGTCACTTCCATGGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR CCA 90 bp | AGGTGTTTTCTGGGAAAGCAAGGACTGTGTGGATGGATACACCCATTTTTCTGGAGCTCCTCTGAGATGTaGCTGGAGTGCAGCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RCFLGKQGLCGWIHPFFWSSSEM*LECSKP Trigger: AGGCTTGCTGCACTCCAGCCACATCTCAGAGGAGCT...CCAGAAAAATGGGTGTATCCATCCACACAGTCCTTGCTTTCCCAGAAAACACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR TCA 90 bp | AGGTTCCAGAATGCCCTCAAATTAACAGCTCAAAGAGAAGTATTTGTATCCCAGGTGCCTTGGGCTTCTTaGGGCCTCCATCCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RFQNALKLTAQREVFVSQVPWAS*GLHPAS Trigger: TGATGCTGGATGGAGGCCTCAAGAAGCCCAAGGCAC...CTGGGATACAAATACTTCTCTTTGAGCTGTTAATTTGAGGGCATTCTGGAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR GCA 90 bp | GAGACACACATCAGGAGTCTAAATCTTCTGAGACTCAGGAGTGAAAAACTGAGAGCTTCCAGAACCGTCTaGAACTTCTGCTTCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ETHIRSLNLLRLRSEKLRASRTV*NFCFCP Trigger: CGGGCAGAAGCAGAAGTTGCAGACGGTTCTGGAAGC...TCTCAGTTTTTCACTCCTGAGTCTCAGAAGATTTAGACTCCTGATGTGTGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR TCA 90 bp | TTACTTCAAACAATTAAAAAGACAATAAAGCGCGGCCGCACAGGGGACGTAACGCATCCTTGTACTTGGTaGACAGCGTGTAAAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: LLQTIKKTIKRGRTGDVTHPCTW*TACKGP Trigger: GGGTCCTTTACACGCTGTTCACCAAGTACAAGGATG...CGTTACGTCCCCTGTGCGGCCGCGCTTTATTGTCTTTTTAATTGTTTGAAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR CCA 90 bp | GTCCTGAGAGTTCATGTAAAAGGTCCGTTAAAAGCAGCAAACCGCAAGACGGATTTTTCCAGAAGTTTCTaGAGCACCTGGCCATCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VLRVHVKGPLKAANRKTDFSRSF*STWPSY Trigger: GTACGATGGCCAGGTGCTCCAGAAACTTCTGGAAAA...ATCCGTCTTGCGGTTTGCTGCTTTTAACGGACCTTTTACATGAACTCTCAGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR CCA 90 bp | AGGTTCCAGAATGCCCTCAAATTAACAGCTCAAAGAGAAGTATTTGTATCCCAGAGTCAGTCACCTCCCTaGTCTTCTTCTTCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RFQNALKLTAQREVFVSQSQSPP*SSSSLP Trigger: TGGCAAGGAAGAAGAAGACCAGGGAGGTGACTGACT...CTGGGATACAAATACTTCTCTTTGAGCTGTTAATTTGAGGGCATTCTGGAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR CAA 90 bp | CTGTGGGCTGGAGCACAGGTGGACAGCCCTCTCCAGCCGAGGGCTAGGCTGGGCCGTGCCTTGGGCTTCTaGAGGCCTCCATCCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LWAGAQVDSPLQPRARLGRALGF*RPPSSI Trigger: GATGCTGGATGGAGGCCTCAAGAAGCCCAAGGCACG...GCCCAGCCTAGCCCTCGGCTGGAGAGGGCTGTCCACCTGTGCTCCAGCCCACAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS TCA 90 bp | CGCTTCCGAACGACCACCACCTGCACGGTGACATGCTCAGGAAGGTaGATGGGGGCCCTGAAGTGCATGGCCAGGGAGACGAGGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: RFRTTTTCTVTCSGR*MGALKCMARETRRC Trigger: GCATCTCCTCGTCTCCCTGGCCATGCACTTCAGGGCCCCCATTCACCTTCCTGAGCATGTCACCGTGCAGGTGGTGGTCGTTCGGAAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS GCA 90 bp | CAGCCATGGGGCCGAAGCAGGTCTTGCACGGCTTCCAGAACCGTCTaGAACTTCTGCTTCTGCCCGATCTCGGACTGCGTCACCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QPWGRSRSCTASRTV*NFCFCPISDCVTSA Trigger: GGCAGAGGTGACGCAGTCCGAGATCGGGCAGAAGCAGAAGTTGCAGACGGTTCTGGAAGCCGTGCAAGACCTGCTTCGGCCCCATGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS GCA 90 bp | TCCACATTCCAACGCAGCGGCCAGCCATGGGGCCGAAGCAGGTCTTaGACGGCTTCCAGAACCGTCTGCAACTTCTGCTTCTGCCCGATC | + |
|
Preference number: 5 (lower is better) Translates to: STFQRSGQPWGRSRS*TASRTVCNFCFCPI Trigger: GATCGGGCAGAAGCAGAAGTTGCAGACGGTTCTGGAAGCCGTGCAAGACCTGCTTCGGCCCCATGGCTGGCCGCTGCGTTGGAATGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR CAA 90 bp | CCCCTGCTGGGAAGCCTCCTCCACCGGAGCGGCTATTCCAAGACCCGTCCCCAGGAGTTGATGGCGCTCTaGCCTTCTTCCTGTAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLLGSLLHRSGYSKTRPQELMAL*PSSCKS Trigger: TGACTTACAGGAAGAAGGCAAGAGCGCCATCAACTC...CTGGGGACGGGTCTTGGAATAGCCGCTCCGGTGGAGGAGGCTTCCCAGCAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS GCA 90 bp | TCACCTCCCTGGTCTTCTTCTTCCTTGCCAGTGTGCCGCCCAACTTaGCCAAGAAAGACTCGTCCTTCTTCATCTTGGGGGCCCGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPPWSSSSLPVCRPT*PRKTRPSSSWGPAG Trigger: CCCCGCGGGCCCCCAAGATGAAGAAGGACGAGTCTTTCTTGGGCAAGTTGGGCGGCACACTGGCAAGGAAGAAGAAGACCAGGGAGGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS GCA 90 bp | GGCCGAAGCAGGTCTTGCACGGCTTCCAGAACCGTCTGCAACTTCTaGTTCTGCCCGATCTCGGACTGCGTCACCTCTGCCACATTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRSRSCTASRTVCNF*FCPISDCVTSATFS Trigger: GCTGAATGTGGCAGAGGTGACGCAGTCCGAGATCGGGCAGAAGCAGAAGTTGCAGACGGTTCTGGAAGCCGTGCAAGACCTGCTTCGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS GCA 90 bp | GTTCCTCCCTGGTCTTCTTCTTCCTTGCCAGTGTGCCGCCCAACTTaGCCAAGAAAGACTCGTCCTTCTTCATCTTGGGGGCCCGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPPWSSSSLPVCRPT*PRKTRPSSSWGPAG Trigger: CCCCGCGGGCCCCCAAGATGAAGAAGGACGAGTCTTTCTTGGGCAAGTTGGGCGGCACACTGGCAAGGAAGAAGAAGACCAGGGAGGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122818.2 |
||
| CDS CCA 90 bp | CGGCCCATCATGATCTCTGTGGTCGTGGTCAGCTCCTCTGAGATGTaGCTGGAGTGCAGCAAGCCTTCTCGCTTCCGAACGACCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: RPIMISVVVVSSSEM*LECSKPSRFRTTTT Trigger: GGTGGTGGTCGTTCGGAAGCGAGAAGGCTTGCTGCACTCCAGCCACATCTCAGAGGAGCTGACCACGACCACAGAGATCATGATGGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS-3UTR CAA 90 bp | GAGTTGATGGCGCTCTTGCCTTCTTCCTGTAAGTCAGTCACAAGGCAGACTGGGTCGTCCTTCTTCATCTaGGGGGCCCGCGGGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ELMALLPSSCKSVTRQTGSSFFI*GARGVG Trigger: GCCCACCCCGCGGGCCCCCAAGATGAAGAAGGACGA...CCCAGTCTGCCTTGTGACTGACTTACAGGAAGAAGGCAAGAGCGCCATCAACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122818.2 |
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| CDS GCA 90 bp | ATGATCTCTGTGGTCGTGGTCAGCTCCTCTGAGATGTGGCTGGAGTaGAGCAAGCCTTCTCGCTTCCGAACGACCACCACCTGCACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MISVVVVSSSEMWLE*SKPSRFRTTTTCTV Trigger: CACCGTGCAGGTGGTGGTCGTTCGGAAGCGAGAAGGCTTGCTGCACTCCAGCCACATCTCAGAGGAGCTGACCACGACCACAGAGATCAT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS-3UTR CAA 90 bp | GAGCCTGCTTACATTCCAAGCAGGACTTGTGCCCTCCAGATAGGGAACCCCAGGTCTTCAGGGCGTGCCTaGGGCTTCTTGAGGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EPAYIPSRTCALQIGNPRSSGRA*GFLRPP Trigger: TGGAGGCCTCAAGAAGCCCAAGGCACGCCCTGAAGA...CCTGGGGTTCCCTATCTGGAGGGCACAAGTCCTGCTTGGAATGTAAGCAGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS TCA 90 bp | CTCAAACCGGCCCATCATGATCTCTGTGGTCGTGGTCAGCTCCTCTaGGATGTGGCTGGAGTGCAGCAAGCCTTCTCGCTTCCGAACGAC | + |
|
Preference number: 5 (lower is better) Translates to: LKPAHHDLCGRGQLL*DVAGVQQAFSLPND Trigger: GTCGTTCGGAAGCGAGAAGGCTTGCTGCACTCCAGCCACATCTCAGAGGAGCTGACCACGACCACAGAGATCATGATGGGCCGGTTTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS GCA 90 bp | TGCCCGATCTCGGACTGCGTCACCTCTGCCACATTCAGCTTGCAGTaGGCCAGCTTTTCCAGAAGTTTCTGGAGCACCTGGCCATCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CPISDCVTSATFSLQ*ASFSRSFWSTWPSY Trigger: GTACGATGGCCAGGTGCTCCAGAAACTTCTGGAAAAGCTGGCGCACTGCAAGCTGAATGTGGCAGAGGTGACGCAGTCCGAGATCGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS GCA 90 bp | GCTTCTGCCCGATCTCGGACTGCGTCACCTCTGCCACATTCAGCTTaGAGTGCGCCAGCTTTTCCAGAAGTTTCTGGAGCACCTGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ASARSRTASPLPHSA*SAPAFPEVSGAPGH Trigger: ATGGCCAGGTGCTCCAGAAACTTCTGGAAAAGCTGGCGCACTGCAAGCTGAATGTGGCAGAGGTGACGCAGTCCGAGATCGGGCAGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS GCA 90 bp | GCTTCCAGAACCGTCTGCAACTTCTGCTTCTGCCCGATCTCGGACTaGGTCACCTCTGCCACATTCAGCTTGCAGTGCGCCAGCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASRTVCNFCFCPISD*VTSATFSLQCASFS Trigger: GGAAAAGCTGGCGCACTGCAAGCTGAATGTGGCAGAGGTGACGCAGTCCGAGATCGGGCAGAAGCAGAAGTTGCAGACGGTTCTGGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS GCA 90 bp | AGCAGGTCTTGCACGGCTTCCAGAACCGTCTGCAACTTCTGCTTCTaGCCGATCTCGGACTGCGTCACCTCTGCCACATTCAGCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRSCTASRTVCNFCF*PISDCVTSATFSLQ Trigger: CTGCAAGCTGAATGTGGCAGAGGTGACGCAGTCCGAGATCGGGCAGAAGCAGAAGTTGCAGACGGTTCTGGAAGCCGTGCAAGACCTGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS-3UTR CAA 90 bp | GAGCCTGCTTACATTCCAAGCAGGACTTGTGCCCTCCAGATAGGGAACCCCAGGGGGGCCATTGGAGAGTaGATGGCGCTCTTGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EPAYIPSRTCALQIGNPRGAIGE*MALLPS Trigger: AGAAGGCAAGAGCGCCATCAACTCTCCAATGGCCCC...CCTGGGGTTCCCTATCTGGAGGGCACAAGTCCTGCTTGGAATGTAAGCAGGCTC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS-3UTR CAA 90 bp | GGACAAATGGGGCGGAGTCCCTGGAGCCAGGGCTGTTGCAGTAATTGCTCTGTGTTCACAAGGTTGAGCTaGTCCGGGGCGTGGTCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GQMGRSPWSQGCCSNCSVFTRLS*SGAWSK Trigger: TTTCGACCACGCCCCGGACAAGCTCAACCTTGTGAA...CACAGAGCAATTACTGCAACAGCCCTGGCTCCAGGGACTCCGCCCCATTTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS TCA 90 bp | GGTCGAAAAGAGTATCGAAGGCGTCCCGCTCAAACCGGCCCATCATaGTCTCTGTGGTCGTGGTCAGCTCCTCTGAGATGTGGCTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GRKEYRRRPAQTGPS*SLWSWSAPLRCGWS Trigger: ACTCCAGCCACATCTCAGAGGAGCTGACCACGACCACAGAGATCATGATGGGCCGGTTTGAGCGGGACGCCTTCGATACTCTTTTCGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS-3UTR CAA 90 bp | GAGCCTGCTTACATTCCAAGCAGGACTTGTGCCCTCCAGATAGGGAACCCCAGGACCCGCAGAGTGGACTaGAGGTCCAAGTTCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: EPAYIPSRTCALQIGNPRTRRVD*RSKFTT Trigger: TGTGGTGAACTTGGACCTCAAGTCCACTCTGCGGGT...CCTGGGGTTCCCTATCTGGAGGGCACAAGTCCTGCTTGGAATGTAAGCAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS TCA 90 bp | TGTCTTCAGGGTGAATGTCCACCAAAGCCGGGGCCATTGGAGAGTTaGTGGCGCTCTTGCCTTCTTCCTGTAAGTCAGTCACCTCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CLQGECPPKPGPLES*WRSCLLPVSQSPPW Trigger: CCAGGGAGGTGACTGACTTACAGGAAGAAGGCAAGAGCGCCATCAACTCTCCAATGGCCCCGGCTTTGGTGGACATTCACCCTGAAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS TCA 90 bp | ATCATGGTACGCTCCTCATTCTCCTCTAGCTGGGTGTCTTCAGGGTaGATGTCCACCAAAGCCGGGGCCATTGGAGAGTTGATGGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IMVRSSFSSSWVSSG*MSTKAGAIGELMAL Trigger: GAGCGCCATCAACTCTCCAATGGCCCCGGCTTTGGTGGACATTCACCCTGAAGACACCCAGCTAGAGGAGAATGAGGAGCGTACCATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS GCA 90 bp | CGTCTGCAACTTCTGCTTCTGCCCGATCTCGGACTGCGTCACCTCTaGCACATTCAGCTTGCAGTGCGCCAGCTTTTCCAGAAGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLQLLLLPDLGLRHL*HIQLAVRQLFQKFL Trigger: CAGAAACTTCTGGAAAAGCTGGCGCACTGCAAGCTGAATGTGGCAGAGGTGACGCAGTCCGAGATCGGGCAGAAGCAGAAGTTGCAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS CCA 90 bp | TCTGCCACATTCAGCTTGCAGTGCGCCAGCTTTTCCAGAAGTTTCTaGAGCACCTGGCCATCGTACAGGTCCTCCTCCAGCTGCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SATFSLQCASFSRSF*STWPSYRSSSSCFT Trigger: TGTGAAGCAGCTGGAGGAGGACCTGTACGATGGCCAGGTGCTCCAGAAACTTCTGGAAAAGCTGGCGCACTGCAAGCTGAATGTGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS-3UTR CAA 90 bp | AGGTGTTTTCTGGGAAAGCAAGGACTGTGTGGATGGATACACCCATTTTTCTGGTCGTCCTTCTTCATCTaGGGGGCCCGCGGGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RCFLGKQGLCGWIHPFFWSSFFI*GARGVG Trigger: GCCCACCCCGCGGGCCCCCAAGATGAAGAAGGACGA...CCAGAAAAATGGGTGTATCCATCCACACAGTCCTTGCTTTCCCAGAAAACACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS-3UTR CAA 90 bp | CATGGGGTCAGCGAGGTCATGCAGGGGATGGTTCCACTGTGGAATGAAGAGGAGACCAACTCCTTGAACTaGGGGTCTTCTCTAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HGVSEVMQGMVPLWNEEETNSLN*GSSLEV Trigger: CACCTCTAGAGAAGACCCCAAGTTCAAGGAGTTGGT...CTCCTCTTCATTCCACAGTGGAACCATCCCCTGCATGACCTCGCTGACCCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS GCA 90 bp | ATCGTACAGGTCCTCCTCCAGCTGCTTCACAATGATGCGCTCCTCTaGCAGCACATCGTTGATCCAGTCCAGAAGTACCTTGACCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: IVQVLLQLLHNDALL*QHIVDPVQKYLDQL Trigger: GAGTTGGTCAAGGTACTTCTGGACTGGATCAACGATGTGCTGGCAGAGGAGCGCATCATTGTGAAGCAGCTGGAGGAGGACCTGTACGAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS GCA 90 bp | AAGTCCAAAGCGGTTCCTCCCTGGTCTTCTTCTTCCTTGCCAGTGTaGCGCCCAACTTGCCCAAGAAAGACTCGTCCTTCTTCATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KSKAVPPWSSSSLPV*RPTCPRKTRPSSSW Trigger: CCAAGATGAAGAAGGACGAGTCTTTCTTGGGCAAGTTGGGCGGCACACTGGCAAGGAAGAAGAAGACCAGGGAGGAACCGCTTTGGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122818.2 |
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| CDS GCA 90 bp | ATACCCAGAAGTCCAAAGCGGTTCCTCCCTGGTCTTCTTCTTCCTTaGCAGTGTGCCGCCCAACTTGCCCAAGAAAGACTCGTCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IPRSPKRFLPGLLLP*QCAAQLAQERLVLL Trigger: AAGAAGGACGAGTCTTTCTTGGGCAAGTTGGGCGGCACACTGGCAAGGAAGAAGAAGACCAGGGAGGAACCGCTTTGGACTTCTGGGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122818.2 |
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| CDS-3UTR CAA 90 bp | CATGGGGTCAGCGAGGTCATGCAGGGGATGGTTCCACTGTGGAATGAAGAGGAGACCTTGACCAACTCCTaGAACTTGGGGTCTTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: HGVSEVMQGMVPLWNEEETLTNS*NLGSSL Trigger: TAGAGAAGACCCCAAGTTCAAGGAGTTGGTCAAGGT...CTCCTCTTCATTCCACAGTGGAACCATCCCCTGCATGACCTCGCTGACCCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS-3UTR CAA 90 bp | GTCCTGAGAGTTCATGTAAAAGGTCCGTTAAAAGCAGCAAACCGCAAGACGGATGACTTCTTCACAAGGTaGAGCTTGTCCGGGGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLRVHVKGPLKAANRKTDDFFTR*SLSGAW Trigger: CCACGCCCCGGACAAGCTCAACCTTGTGAAGAAGTC...ATCCGTCTTGCGGTTTGCTGCTTTTAACGGACCTTTTACATGAACTCTCAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS-3UTR CAA 90 bp | TTACTTCAAACAATTAAAAAGACAATAAAGCGCGGCCGCACAGGGGACGTAACGAGCTTATTCAGGTGTTaGTTCACAAACGTGATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLQTIKKTIKRGRTGDVTSLFRC*FTNVMR Trigger: TCTCATCACGTTTGTGAACAAACACCTGAATAAGCT...CGTTACGTCCCCTGTGCGGCCGCGCTTTATTGTCTTTTTAATTGTTTGAAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS CCA 72 bp | CCAACTTGCCCAAGAAAGACTCGTCCTTCTTCATCTTaGGGGCCCGCGGGGTGGGCGACCGTGGTGGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PTCPRKTRPSSS*GPAGWATVVAR Trigger: CCGCGCCACCACGGTCGCCCACCCCGCGGGCCCCCAAGATGAAGAAGGACGAGTCTTTCTTGGGCAAGTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023072.7 ENSMUST00000122818.2 |
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| CDS CAA 72 bp | CCCAACTTGCCCAAGAAAGACTCGTCCTTCTTCATCTaGGGGGCCCGCGGGGTGGGCGACCGTGGTGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: PNLPKKDSSFFI*GARGVGDRGGA Trigger: CGCGCCACCACGGTCGCCCACCCCGCGGGCCCCCAAGATGAAGAAGGACGAGTCTTTCTTGGGCAAGTTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023072.7 ENSMUST00000122818.2 |
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| CDS GCA 72 bp | CAACGCAGCGGCCAGCCATGGGGCCGAAGCAGGTCTTaGACGGCTTCCAGAACCGTCTGCAACTTCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QRSGQPWGRSRS*TASRTVCNFCF Trigger: GAAGCAGAAGTTGCAGACGGTTCTGGAAGCCGTGCAAGACCTGCTTCGGCCCCATGGCTGGCCGCTGCGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS CAA 72 bp | CCAACGCAGCGGCCAGCCATGGGGCCGAAGCAGGTCTaGCACGGCTTCCAGAACCGTCTGCAACTTCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PTQRPAMGPKQV*HGFQNRLQLLL Trigger: AAGCAGAAGTTGCAGACGGTTCTGGAAGCCGTGCAAGACCTGCTTCGGCCCCATGGCTGGCCGCTGCGTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS CAA 90 bp | GTCCACATTCCAACGCAGCGGCCAGCCATGGGGCCGAAGCAGGTCTaGCACGGCTTCCAGAACCGTCTGCAACTTCTGCTTCTGCCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: VHIPTQRPAMGPKQV*HGFQNRLQLLLLPD Trigger: ATCGGGCAGAAGCAGAAGTTGCAGACGGTTCTGGAAGCCGTGCAAGACCTGCTTCGGCCCCATGGCTGGCCGCTGCGTTGGAATGTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS GCA 72 bp | GGCCGAAGCAGGTCTTGCACGGCTTCCAGAACCGTCTaGAACTTCTGCTTCTGCCCGATCTCGGACTGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: GRSRSCTASRTV*NFCFCPISDCV Trigger: GACGCAGTCCGAGATCGGGCAGAAGCAGAAGTTGCAGACGGTTCTGGAAGCCGTGCAAGACCTGCTTCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS CAA 90 bp | GTCACCTCCCTGGTCTTCTTCTTCCTTGCCAGTGTGCCGCCCAACTaGCCCAAGAAAGACTCGTCCTTCTTCATCTTGGGGGCCCGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: VTSLVFFFLASVPPN*PKKDSSFFILGARG Trigger: CCCGCGGGCCCCCAAGATGAAGAAGGACGAGTCTTTCTTGGGCAAGTTGGGCGGCACACTGGCAAGGAAGAAGAAGACCAGGGAGGTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS CAA 90 bp | GGTTCCTCCCTGGTCTTCTTCTTCCTTGCCAGTGTGCCGCCCAACTaGCCCAAGAAAGACTCGTCCTTCTTCATCTTGGGGGCCCGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSSLVFFFLASVPPN*PKKDSSFFILGARG Trigger: CCCGCGGGCCCCCAAGATGAAGAAGGACGAGTCTTTCTTGGGCAAGTTGGGCGGCACACTGGCAAGGAAGAAGAAGACCAGGGAGGAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122818.2 |
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| CDS GCA 72 bp | ACCGTCTGCAACTTCTGCTTCTGCCCGATCTCGGACTaGGTCACCTCTGCCACATTCAGCTTGCAGTGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: TVCNFCFCPISD*VTSATFSLQCA Trigger: GGCGCACTGCAAGCTGAATGTGGCAGAGGTGACGCAGTCCGAGATCGGGCAGAAGCAGAAGTTGCAGACGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS GCA 72 bp | AGGTCTTGCACGGCTTCCAGAACCGTCTGCAACTTCTaGTTCTGCCCGATCTCGGACTGCGTCACCTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSCTASRTVCNF*FCPISDCVTSA Trigger: GGCAGAGGTGACGCAGTCCGAGATCGGGCAGAAGCAGAAGTTGCAGACGGTTCTGGAAGCCGTGCAAGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS CAA 90 bp | TGCTTCTGCCCGATCTCGGACTGCGTCACCTCTGCCACATTCAGCTaGCAGTGCGCCAGCTTTTCCAGAAGTTTCTGGAGCACCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CFCPISDCVTSATFS*QCASFSRSFWSTWP Trigger: TGGCCAGGTGCTCCAGAAACTTCTGGAAAAGCTGGCGCACTGCAAGCTGAATGTGGCAGAGGTGACGCAGTCCGAGATCGGGCAGAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS GCA 72 bp | CTTCTGCTTCTGCCCGATCTCGGACTGCGTCACCTCTaGCACATTCAGCTTGCAGTGCGCCAGCTTTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLLLPDLGLRHL*HIQLAVRQLFQ Trigger: CTGGAAAAGCTGGCGCACTGCAAGCTGAATGTGGCAGAGGTGACGCAGTCCGAGATCGGGCAGAAGCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS GCA 72 bp | GGGGCCCTGAAGTGCATGGCCAGGGAGACGAGGAGATaGAGAATGGCCACTAGGTTCTTCCCATGGATAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GALKCMARETRR*RMATRFFPWIE Trigger: CTCTATCCATGGGAAGAACCTAGTGGCCATTCTGCATCTCCTCGTCTCCCTGGCCATGCACTTCAGGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS TCA 72 bp | CGCTCCTCATTCTCCTCTAGCTGGGTGTCTTCAGGGTaGATGTCCACCAAAGCCGGGGCCATTGGAGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSSFSSSWVSSG*MSTKAGAIGEL Trigger: CAACTCTCCAATGGCCCCGGCTTTGGTGGACATTCACCCTGAAGACACCCAGCTAGAGGAGAATGAGGAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS TCA 72 bp | GAGTATCGAAGGCGTCCCGCTCAAACCGGCCCATCATaGTCTCTGTGGTCGTGGTCAGCTCCTCTGAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: EYRRRPAQTGPS*SLWSWSAPLRC Trigger: ACATCTCAGAGGAGCTGACCACGACCACAGAGATCATGATGGGCCGGTTTGAGCGGGACGCCTTCGATACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS GCA 72 bp | TCGGACTGCGTCACCTCTGCCACATTCAGCTTGCAGTaGGCCAGCTTTTCCAGAAGTTTCTGGAGCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SDCVTSATFSLQ*ASFSRSFWSTW Trigger: CCAGGTGCTCCAGAAACTTCTGGAAAAGCTGGCGCACTGCAAGCTGAATGTGGCAGAGGTGACGCAGTCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS CCA 72 bp | TTCAGCTTGCAGTGCGCCAGCTTTTCCAGAAGTTTCTaGAGCACCTGGCCATCGTACAGGTCCTCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FSLQCASFSRSF*STWPSYRSSSS Trigger: GCTGGAGGAGGACCTGTACGATGGCCAGGTGCTCCAGAAACTTCTGGAAAAGCTGGCGCACTGCAAGCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS CCA 72 bp | ATGATCTCTGTGGTCGTGGTCAGCTCCTCTGAGATGTaGCTGGAGTGCAGCAAGCCTTCTCGCTTCCGAACG | + |
|
Preference number: 6 (lower is better) Translates to: MISVVVVSSSEM*LECSKPSRFRT Trigger: CGTTCGGAAGCGAGAAGGCTTGCTGCACTCCAGCCACATCTCAGAGGAGCTGACCACGACCACAGAGATCAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS CAA 72 bp | ACCAAAGCCGGGGCCATTGGAGAGTTGATGGCGCTCTaGCCTTCTTCCTGTAAGTCAGTCACCTCCCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TKAGAIGELMAL*PSSCKSVTSLV Trigger: GACCAGGGAGGTGACTGACTTACAGGAAGAAGGCAAGAGCGCCATCAACTCTCCAATGGCCCCGGCTTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS CAA 72 bp | CCGATCTCGGACTGCGTCACCTCTGCCACATTCAGCTaGCAGTGCGCCAGCTTTTCCAGAAGTTTCTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PISDCVTSATFS*QCASFSRSFWS Trigger: GCTCCAGAAACTTCTGGAAAAGCTGGCGCACTGCAAGCTGAATGTGGCAGAGGTGACGCAGTCCGAGATCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS GCA 72 bp | CGATCTCGGACTGCGTCACCTCTGCCACATTCAGCTTaGAGTGCGCCAGCTTTTCCAGAAGTTTCTGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSRTASPLPHSA*SAPAFPEVSGA Trigger: TGCTCCAGAAACTTCTGGAAAAGCTGGCGCACTGCAAGCTGAATGTGGCAGAGGTGACGCAGTCCGAGATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS CCA 72 bp | CGCTCTTGCCTTCTTCCTGTAAGTCAGTCACCTCCCTaGTCTTCTTCTTCCTTGCCAGTGTGCCGCCCAACT | + |
|
Preference number: 6 (lower is better) Translates to: RSCLLPVSQSPP*SSSSLPVCRPT Trigger: AGTTGGGCGGCACACTGGCAAGGAAGAAGAAGACCAGGGAGGTGACTGACTTACAGGAAGAAGGCAAGAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
||
| CDS CAA 90 bp | CATACCCAGAAGTCCAAAGCGGTTCCTCCCTGGTCTTCTTCTTCCTaGCCAGTGTGCCGCCCAACTTGCCCAAGAAAGACTCGTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HTQKSKAVPPWSSSS*PVCRPTCPRKTRPS Trigger: AGAAGGACGAGTCTTTCTTGGGCAAGTTGGGCGGCACACTGGCAAGGAAGAAGAAGACCAGGGAGGAACCGCTTTGGACTTCTGGGTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122818.2 |
||
| CDS GCA 72 bp | TGGTCTTCTTCTTCCTTGCCAGTGTGCCGCCCAACTTaGCCAAGAAAGACTCGTCCTTCTTCATCTTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WSSSSLPVCRPT*PRKTRPSSSWG Trigger: CCCCCAAGATGAAGAAGGACGAGTCTTTCTTGGGCAAGTTGGGCGGCACACTGGCAAGGAAGAAGAAGACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023072.7 ENSMUST00000122818.2 |
||
| CDS CAA 72 bp | CTGGTCTTCTTCTTCCTTGCCAGTGTGCCGCCCAACTaGCCCAAGAAAGACTCGTCCTTCTTCATCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LVFFFLASVPPN*PKKDSSFFILG Trigger: CCCCAAGATGAAGAAGGACGAGTCTTTCTTGGGCAAGTTGGGCGGCACACTGGCAAGGAAGAAGAAGACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023072.7 ENSMUST00000122818.2 |
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| CDS CAA 72 bp | AAGTCCAAAGCGGTTCCTCCCTGGTCTTCTTCTTCCTaGCCAGTGTGCCGCCCAACTTGCCCAAGAAAGACT | + |
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Preference number: 6 (lower is better) Translates to: KSKAVPPWSSSS*PVCRPTCPRKT Trigger: AGTCTTTCTTGGGCAAGTTGGGCGGCACACTGGCAAGGAAGAAGAAGACCAGGGAGGAACCGCTTTGGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122818.2 |
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| CDS CAA 90 bp | ATGCGCTCCTCTGCCAGCACATCGTTGATCCAGTCCAGAAGTACCTaGACCAACTCCTTGAACTTGGGGTCTTCTCTAGAGGTGGGATCG | + |
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Preference number: 6 (lower is better) Translates to: MRSSASTSLIQSRST*TNSLNLGSSLEVGS Trigger: CGATCCCACCTCTAGAGAAGACCCCAAGTTCAAGGAGTTGGTCAAGGTACTTCTGGACTGGATCAACGATGTGCTGGCAGAGGAGCGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS CAA 90 bp | GCCAGCACATCGTTGATCCAGTCCAGAAGTACCTTGACCAACTCCTaGAACTTGGGGTCTTCTCTAGAGGTGGGATCGATCATGGTACGC | + |
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Preference number: 6 (lower is better) Translates to: ASTSLIQSRSTLTNS*NLGSSLEVGSIMVR Trigger: GCGTACCATGATCGATCCCACCTCTAGAGAAGACCCCAAGTTCAAGGAGTTGGTCAAGGTACTTCTGGACTGGATCAACGATGTGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS CAA 72 bp | TGCTTCACAATGATGCGCTCCTCTGCCAGCACATCGTaGATCCAGTCCAGAAGTACCTTGACCAACTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: CFTMMRSSASTS*IQSRSTLTNSL Trigger: CAAGGAGTTGGTCAAGGTACTTCTGGACTGGATCAACGATGTGCTGGCAGAGGAGCGCATCATTGTGAAGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS CAA 72 bp | TCGTTGATCCAGTCCAGAAGTACCTTGACCAACTCCTaGAACTTGGGGTCTTCTCTAGAGGTGGGATCGATC | + |
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Preference number: 6 (lower is better) Translates to: SLIQSRSTLTNS*NLGSSLEVGSI Trigger: GATCGATCCCACCTCTAGAGAAGACCCCAAGTTCAAGGAGTTGGTCAAGGTACTTCTGGACTGGATCAACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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| CDS CAA 72 bp | TTGTTCACAAACGTGATGAGAGACTTCTTCACAAGGTaGAGCTTGTCCGGGGCGTGGTCGAAAAGAGTATCG | + |
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Preference number: 6 (lower is better) Translates to: LFTNVMRDFFTR*SLSGAWSKRVS Trigger: CGATACTCTTTTCGACCACGCCCCGGACAAGCTCAACCTTGTGAAGAAGTCTCTCATCACGTTTGTGAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023072.7 |
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