Pregenerated sensors for PARS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043572Ensembl transcript IDs: ENSMUST00000058905.8, ENSMUST00000106781.2, ENSMUST00000106782.2
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TCTCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGTGTGGGTGTGTCGAGCGTGTGCTCAGACTGTaGGGTGGGGTTGGGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SPHPEGSLRPQQGCGCVERVLRL*GGVGEA Trigger: TGCTTCCCCAACCCCACCCCACAGTCTGAGCACACG...CTCGACACACCCACACCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCCTAGGACCTCACAGACCCAACTCCATCTCCACATCCAGAAGGGAGTCTGCCCCAGCAGGGGTGTaGGTGTGTCGAGTCACCAGT | + |
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Preference number: 2 (lower is better) Translates to: PALGPHRPNSISTSRRESAPAGV*VCRVTS Trigger: ACTGGTGACTCGACACACCCACACCCCTGCTGGGGC...AGACTCCCTTCTGGATGTGGAGATGGAGTTGGGTCTGTGAGGTCCTAGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCCAGGTTCCAGACTATGCGGCTCCCAGCTTCTCAGAGGAGAAGGGCCGGTACAAGGGAAAGTGACCTaGGTCTCTTTGCCACCTTTC | + |
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Preference number: 2 (lower is better) Translates to: QPGSRLCGSQLLRGEGPVQGKVT*VSLPPF Trigger: GAAAGGTGGCAAAGAGACCCAGGTCACTTTCCCTTG...TACCGGCCCTTCTCCTCTGAGAAGCTGGGAGCCGCATAGTCTGGAACCTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| 3UTR-3UTR TCA 90 bp | CATGTGTCTTGTGGAGGCTCAGTGAGAGCCAGCCCTAGGACCTCACAGACCCAAGTGTCGAGTCACCAGTaGATTAGCAGCAGCCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: HVSCGGSVRASPRTSQTQVSSHQ*ISSSQV Trigger: AACCTGGCTGCTGCTAATTCACTGGTGACTCGACAC...TTGGGTCTGTGAGGTCCTAGGGCTGGCTCTCACTGAGCCTCCACAAGACACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| 3UTR TCA 72 bp | GGCCCCAGCAGGGGTGTGGGTGTGTCGAGTCACCAGTaGATTAGCAGCAGCCAGGTTCCAGACTATGCGGCT | + |
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Preference number: 3 (lower is better) Translates to: GPSRGVGVSSHQ*ISSSQVPDYAA Trigger: AGCCGCATAGTCTGGAACCTGGCTGCTGCTAATTCACTGGTGACTCGACACACCCACACCCCTGCTGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| 3UTR CCA 72 bp | ACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGTGTaGGTGTGTCGAGTCACCAGTGAATTAGCAGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: TSRRESQAPAGV*VCRVTSELAAA Trigger: GGCTGCTGCTAATTCACTGGTGACTCGACACACCCACACCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| 3UTR CCA 72 bp | CCCAGGACAGAAGTGGAGGGAACTACAGTGTTACAGTaGACACCAATCCTAGGGGCAGGTGTGGTTGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: PRTEVEGTTVLQ*TPILGAGVVGP Trigger: GGGGCCAACCACACCTGCCCCTAGGATTGGTGTCCACTGTAACACTGTAGTTCCCTCCACTTCTGTCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCTCAGTGAGAGCCAGCCCTAGGACCTCACAGACCCAACTCCATCTCCACGCCCCACTATCTGGATaGAATGAAATGCAAGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: GGSVRASPRTSQTQLHLHAPLSG*NEMQGV Trigger: CACGCCTTGCATTTCATTCAATCCAGATAGTGGGGC...GTGGAGATGGAGTTGGGTCTGTGAGGTCCTAGGGCTGGCTCTCACTGAGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| 3UTR TCA 72 bp | AGGAGAAGGGCCGGTAGCCCCACTATCTGGATTGAATaGAATGCAAGGCGTGTGCTCAGACTGTGGGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: RRRAGSPTIWIE*NARRVLRLWGG Trigger: CCCACCCCACAGTCTGAGCACACGCCTTGCATTTCATTCAATCCAGATAGTGGGGCTACCGGCCCTTCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| 3UTR CCA 72 bp | CCTAACACGCTCTCCCCTTCCACGAGAAGCCACTTCTaGAGAAACCACCCAGGACAGAAGTGGAGGGAACTA | + |
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Preference number: 3 (lower is better) Translates to: PNTLSPSTRSHF*RNHPGQKWREL Trigger: TAGTTCCCTCCACTTCTGTCCTGGGTGGTTTCTCCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCGTGTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| 3UTR CCA 72 bp | AGAAGCCACTTCTGGAGAAACCACCCAGGACAGAAGTaGAGGGAACTACAGTGTTACAGTGGACACCAATCC | + |
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Preference number: 3 (lower is better) Translates to: RSHFWRNHPGQK*RELQCYSGHQS Trigger: GGATTGGTGTCCACTGTAACACTGTAGTTCCCTCCACTTCTGTCCTGGGTGGTTTCTCCAGAAGTGGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| 3UTR CCA 72 bp | CTTACACCCAGAAACTCAGCTCAAGGGAAAGTGACCTaGGTCTCTTTGCCACCTTTCAGCCCTCCTAACAGA | + |
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Preference number: 3 (lower is better) Translates to: LTPRNSAQGKVT*VSLPPFSPPNR Trigger: TCTGTTAGGAGGGCTGAAAGGTGGCAAAGAGACCCAGGTCACTTTCCCTTGAGCTGAGTTTCTGGGTGTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| 3UTR TCA 72 bp | TTATTCAATCAACAGAACATGATCTCAGTGCTGAAGTaGCCCAGTAAGGTCAGGTATCTGGAGGTAGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: LFNQQNMISVLK*PSKVRYLEVAL Trigger: CAAAGCTACCTCCAGATACCTGACCTTACTGGGTCACTTCAGCACTGAGATCATGTTCTGTTGATTGAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR GCA 90 bp | TCTCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGTGTGGGTGTGTCGAGTCGTGCCCCCGATGCTaGCCACATCTGCCCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SPHPEGSLRPQQGCGCVESCPRC*PHLPWP Trigger: AGGCCAGGGCAGATGTGGGCAGCATCGGGGGCACGA...CTCGACACACCCACACCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | TCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGTGTGGGTGTGTCGAGTCCCGCCACAGCTCAGCTaGGCTGAGGCTGGGCATGTT | + |
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Preference number: 4 (lower is better) Translates to: STSRRESQAPAGVWVCRVPPQLS*AEAGHV Trigger: AACATGCCCAGCCTCAGCCCAGCTGAGCTGTGGCGG...GACTCGACACACCCACACCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR GCA 90 bp | GCCCCAGCAGGGGTGTGGGTGTGTCGAGTCACCAGTGAATTAGCAGCAGCCAGGTGCAGTGACGGAGGCTaGAGGCAGCCAAGGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: APAGVWVCRVTSELAAARCSDGG*RQPRQT Trigger: TGTCTGCCTTGGCTGCCTGCAGCCTCCGTCACTGCA...CCTGGCTGCTGCTAATTCACTGGTGACTCGACACACCCACACCCCTGCTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR GCA 90 bp | ACAGACCCAACTCCATCTCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGTGCAGTGACGGAGGCTaGAGGCAGCCAAGGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: TDPTPSPHPEGSLRPQQGCSDGG*RQPRQT Trigger: TGTCTGCCTTGGCTGCCTGCAGCCTCCGTCACTGCA...CCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGAGATGGAGTTGGGTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR GCA 90 bp | CTAACACGCTCTCCCCTTCCACGAGAAGCCACTTCTGGAGAAACCACCCAGGACGTCTCAGCAGCTCCCTaGCCATCAGGTCCCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LTRSPLPREATSGETTQDVSAAP*PSGPSG Trigger: GCCGCTGGGACCTGATGGGCAGGGAGCTGCTGAGAC...GTCCTGGGTGGTTTCTCCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCGTGTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR GCA 90 bp | CGCTCTCCCCTTCCACGAGAAGCCACTTCTGGAGAAACCACCCAGGACAGAAGTTCGTGCCCCCGATGCTaGCCACATCTGCCCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RSPLPREATSGETTQDRSSCPRC*PHLPWP Trigger: AGGCCAGGGCAGATGTGGGCAGCATCGGGGGCACGA...ACTTCTGTCCTGGGTGGTTTCTCCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | ACAGACCCAACTCCATCTCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGACAGCCAGGGCTGGCTaGAAGGATCAGGCCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: TDPTPSPHPEGSLRPQQGTARAG*KDQAHL Trigger: CAAGTGGGCCTGATCCTTCCAGCCAGCCCTGGCTGT...CCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGAGATGGAGTTGGGTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | GGAGGCTCAGTGAGAGCCAGCCCTAGGACCTCACAGACCCAACTCCATCTCCACGGTAACAGCCAGGGCTaGCTGGAAGGATCAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GGSVRASPRTSQTQLHLHGNSQG*LEGSGP Trigger: TGGGCCTGATCCTTCCAGCCAGCCCTGGCTGTTACC...GTGGAGATGGAGTTGGGTCTGTGAGGTCCTAGGGCTGGCTCTCACTGAGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | GGAGGCTCAGTGAGAGCCAGCCCTAGGACCTCACAGACCCAACTCCATCTCCACGACCAAACCGGGGCCTaGGCTCATCCCGAAACTTCC | + |
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Preference number: 4 (lower is better) Translates to: GGSVRASPRTSQTQLHLHDQTGA*AHPETS Trigger: GGAAGTTTCGGGATGAGCCCAGGCCCCGGTTTGGTC...GTGGAGATGGAGTTGGGTCTGTGAGGTCCTAGGGCTGGCTCTCACTGAGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | GGAGGCTCAGTGAGAGCCAGCCCTAGGACCTCACAGACCCAACTCCATCTCCACCGGAGAAGTGGCAGCTaGGACAGACCACAAGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: GGSVRASPRTSQTQLHLHRRSGS*DRPQGG Trigger: ACCGCCTTGTGGTCTGTCCCAGCTGCCACTTCTCCG...GTGGAGATGGAGTTGGGTCTGTGAGGTCCTAGGGCTGGCTCTCACTGAGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR TCA 90 bp | GCCAGGTTCCAGACTATGCGGCTCCCAGCTTCTCAGAGGAGAAGGGCCGGTAGCCCCTCTTGCCCGCAATaGTCACAAAGGGGTAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: ARFQTMRLPASQRRRAGSPSCPQ*SQRGSQ Trigger: TTGGCTACCCCTTTGTGATCATTGCGGGCAAGAGGG...GCTACCGGCCCTTCTCCTCTGAGAAGCTGGGAGCCGCATAGTCTGGAACCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR GCA 90 bp | TCTCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGTGTGGGTGTGTCGAGGGCATGTTGATTTTCTaGCCGCCGATGGCCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: SPHPEGSLRPQQGCGCVEGMLIF*PPMACI Trigger: GATGCAGGCCATCGGCGGGCAGAAAATCAACATGCC...CTCGACACACCCACACCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCCTAGGACCTCACAGACCCAACTCCATCTCCACATCCAGAAGGGAGTCTCCGCCACAGCTCAGCTaGGCTGAGGCTGGGCATGTT | + |
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Preference number: 4 (lower is better) Translates to: PALGPHRPNSISTSRRESPPQLS*AEAGHV Trigger: AACATGCCCAGCCTCAGCCCAGCTGAGCTGTGGCGG...AGACTCCCTTCTGGATGTGGAGATGGAGTTGGGTCTGTGAGGTCCTAGGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR TCA 90 bp | CAGACCCAACTCCATCTCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGTTCTTCCCGAAGGTTCTaGGGCTGGAACATGCGGGAT | + |
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Preference number: 4 (lower is better) Translates to: QTQLHLHIQKGVSGPSRGSSRRF*GWNMRD Trigger: ATCCCGCATGTTCCAGCCTCAGAACCTTCGGGAAGA...ACCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGAGATGGAGTTGGGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR TCA 90 bp | GGAGGCTCAGTGAGAGCCAGCCCTAGGACCTCACAGACCCAACTCCATCTCCACTCTTCCCGAAGGTTCTaGGGCTGGAACATGCGGGAT | + |
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Preference number: 4 (lower is better) Translates to: GGSVRASPRTSQTQLHLHSSRRF*GWNMRD Trigger: ATCCCGCATGTTCCAGCCTCAGAACCTTCGGGAAGA...GTGGAGATGGAGTTGGGTCTGTGAGGTCCTAGGGCTGGCTCTCACTGAGCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR TCA 90 bp | CAGCCAGGTTCCAGACTATGCGGCTCCCAGCTTCTCAGAGGAGAAGGGCCGGTACCCTCTTGCCCGCAATaGTCACAAAGGGGTAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: QPGSRLCGSQLLRGEGPVPSCPQ*SQRGSQ Trigger: TTGGCTACCCCTTTGTGATCATTGCGGGCAAGAGGG...TACCGGCCCTTCTCCTCTGAGAAGCTGGGAGCCGCATAGTCTGGAACCTGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR GCA 90 bp | TCTCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGTGTGGGTGTGTCGAGCCAAGCAGTACTCTTTaGCGTGCCTGTCTCTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: SPHPEGSLRPQQGCGCVEPSSTL*RACLSV Trigger: GACTGAGAGACAGGCACGGCAAAGAGTACTGCTTGG...CTCGACACACCCACACCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR GCA 90 bp | GGAGGCTCAGTGAGAGCCAGCCCTAGGACCTCACAGACCCAACTCCATCTCCACCCAAACCTCAAAGTGTaGTGGGTCCTCCAAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: GGSVRASPRTSQTQLHLHPNLKV*WVLQGP Trigger: AGGGCCTTGGAGGACCCAGCACACTTTGAGGTTTGG...GTGGAGATGGAGTTGGGTCTGTGAGGTCCTAGGGCTGGCTCTCACTGAGCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | GGAGGCTCAGTGAGAGCCAGCCCTAGGACCTCACAGACCCAACTCCATCTCCACATGGCCTGCATCTCCTaGTCTATCACCCGCACAAGC | + |
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Preference number: 4 (lower is better) Translates to: GGSVRASPRTSQTQLHLHMACIS*SITRTS Trigger: GCTTGTGCGGGTGATAGACCAGGAGATGCAGGCCAT...GTGGAGATGGAGTTGGGTCTGTGAGGTCCTAGGGCTGGCTCTCACTGAGCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | CAGCCAGGTTCCAGACTATGCGGCTCCCAGCTTCTCAGAGGAGAAGGGCCGGTATTTTCTGCCCGCCGATaGCCTGCATCTCCTGGTCTA | + |
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Preference number: 4 (lower is better) Translates to: QPGSRLCGSQLLRGEGPVFSARR*PASPGL Trigger: TAGACCAGGAGATGCAGGCCATCGGCGGGCAGAAAA...TACCGGCCCTTCTCCTCTGAGAAGCTGGGAGCCGCATAGTCTGGAACCTGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | GGAGGCTCAGTGAGAGCCAGCCCTAGGACCTCACAGACCCAACTCCATCTCCACGGTAGCTGGAATTCATaGGACATCGTGCCCCCGATG | + |
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Preference number: 4 (lower is better) Translates to: GGSVRASPRTSQTQLHLHGSWNS*DIVPPM Trigger: CATCGGGGGCACGATGTCCCATGAATTCCAGCTACC...GTGGAGATGGAGTTGGGTCTGTGAGGTCCTAGGGCTGGCTCTCACTGAGCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | GCCAGGTTCCAGACTATGCGGCTCCCAGCTTCTCAGAGGAGAAGGGCCGGTAGCCTAGTATCTCTGTGTTaGCGGAGAAGTGGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ARFQTMRLPASQRRRAGSLVSLC*RRSGSW Trigger: CCAGCTGCCACTTCTCCGCCAACACAGAGATACTAG...GCTACCGGCCCTTCTCCTCTGAGAAGCTGGGAGCCGCATAGTCTGGAACCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR TCA 90 bp | CTAACACGCTCTCCCCTTCCACGAGAAGCCACTTCTGGAGAAACCACCCAGGACGCACTGTATAGGGCATaGGGTGGTAACAGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LTRSPLPREATSGETTQDALYRA*GGNSQG Trigger: GCCCTGGCTGTTACCACCTCATGCCCTATACAGTGC...GTCCTGGGTGGTTTCTCCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCGTGTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR GCA 90 bp | ATGCGGCTCCCAGCTTCTCAGAGGAGAAGGGCCGGTAGCCCCACTATCTGGATTGGCATGTTGATTTTCTaGCCGCCGATGGCCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: MRLPASQRRRAGSPTIWIGMLIF*PPMACI Trigger: GATGCAGGCCATCGGCGGGCAGAAAATCAACATGCC...AATCCAGATAGTGGGGCTACCGGCCCTTCTCCTCTGAGAAGCTGGGAGCCGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR GCA 90 bp | AGACCCAACTCCATCTCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGTGCCAAGCAGTACTCTTTaGCGTGCCTGTCTCTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: RPNSISTSRRESQAPAGVPSSTL*RACLSV Trigger: GACTGAGAGACAGGCACGGCAAAGAGTACTGCTTGG...CACCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGAGATGGAGTTGGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | CAGACCCAACTCCATCTCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGTTGCCCACATCTGCCCTaGCCTTCATCCATTGCAATC | + |
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Preference number: 4 (lower is better) Translates to: QTQLHLHIQKGVSGPSRGCPHLP*PSSIAI Trigger: GATTGCAATGGATGAAGGCCAGGGCAGATGTGGGCA...ACCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGAGATGGAGTTGGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | ACAGACCCAACTCCATCTCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGTTTGGTTTCTGTCAGTaGACCCTGGCAGTCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: TDPTPSPHPEGSLRPQQGFGFCQ*TLAVRA Trigger: TGCCCTGACTGCCAGGGTCCACTGACAGAAACCAAA...CCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGAGATGGAGTTGGGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR TCA 90 bp | GCCCCAGCAGGGGTGTGGGTGTGTCGAGTCACCAGTGAATTAGCAGCAGCCAGGGGGGCACAGCCTCCATaGTGTCATCATATAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: APAGVWVCRVTSELAAARGAQPP*CHHITS Trigger: AGAAGTTATATGATGACATCATGGAGGCTGTGCCCC...CCTGGCTGCTGCTAATTCACTGGTGACTCGACACACCCACACCCCTGCTGGGGC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR GCA 90 bp | GGAGGCTCAGTGAGAGCCAGCCCTAGGACCTCACAGACCCAACTCCATCTCCACTCTGAGGCTGGAACATaGGGGATAATACCAAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: GGSVRASPRTSQTQLHLHSEAGT*GIIPSA Trigger: AGCGCTTGGTATTATCCCGCATGTTCCAGCCTCAGA...GTGGAGATGGAGTTGGGTCTGTGAGGTCCTAGGGCTGGCTCTCACTGAGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR GCA 90 bp | CGCTCTCCCCTTCCACGAGAAGCCACTTCTGGAGAAACCACCCAGGACAGAAGTGATGCTGCCCACATCTaGCCTGGCCTTCATCCATTG | + |
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Preference number: 4 (lower is better) Translates to: RSPLPREATSGETTQDRSDAAHI*PGLHPL Trigger: CAATGGATGAAGGCCAGGGCAGATGTGGGCAGCATC...ACTTCTGTCCTGGGTGGTTTCTCCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR GCA 90 bp | AGGAGTAGAGTTTTTCCTAACACGCTCTCCCCTTCCACGAGAAGCCACTTCTGGACATCGTGCCCCCGATaGTGCCCACATCTGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSRVFPNTLSPSTRSHFWTSCPR*CPHLPW Trigger: CCAGGGCAGATGTGGGCAGCATCGGGGGCACGATGT...CCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCGTGTTAGGAAAAACTCTACTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTTCCTAACACGCTCTCCCCTTCCACGAGAAGCCACTTCTGGAGAAACCACACATCGTGCCCCCGATaGTGCCCACATCTGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFPNTLSPSTRSHFWRNHTSCPR*CPHLPW Trigger: CCAGGGCAGATGTGGGCAGCATCGGGGGCACGATGT...GTGGTTTCTCCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCGTGTTAGGAAAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR GCA 90 bp | CATGTGTCTTGTGGAGGCTCAGTGAGAGCCAGCCCTAGGACCTCACAGACCCAACCAAACCTCAAAGTGTaGTGGGTCCTCCAAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HVSCGGSVRASPRTSQTQPNLKV*WVLQGP Trigger: AGGGCCTTGGAGGACCCAGCACACTTTGAGGTTTGG...TTGGGTCTGTGAGGTCCTAGGGCTGGCTCTCACTGAGCCTCCACAAGACACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR CCA 90 bp | CTAACACGCTCTCCCCTTCCACGAGAAGCCACTTCTGGAGAAACCACCCAGGACGGTAGCTGGAATTCATaGGACATCGTGCCCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LTRSPLPREATSGETTQDGSWNS*DIVPPM Trigger: CATCGGGGGCACGATGTCCCATGAATTCCAGCTACC...GTCCTGGGTGGTTTCTCCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCGTGTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCAGGTTCCAGACTATGCGGCTCCCAGCTTCTCAGAGGAGAAGGGCCGGTATCAGTCTGTTTCCAATaGTCAGGTGGGTCCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QPGSRLCGSQLLRGEGPVSVCFQ*SGGSCR Trigger: ACGACAGGACCCACCTGACCATTGGAAACAGACTGA...TACCGGCCCTTCTCCTCTGAGAAGCTGGGAGCCGCATAGTCTGGAACCTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR TCA 90 bp | ACAGACCCAACTCCATCTCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGACCTCACCAGTGTTCTaGGACCAAACCTCAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TDPTPSPHPEGSLRPQQGTSPVF*DQTSKC Trigger: ACACTTTGAGGTTTGGTCTCAGAACACTGGTGAGGT...CCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGAGATGGAGTTGGGTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR GCA 90 bp | ATGCGGCTCCCAGCTTCTCAGAGGAGAAGGGCCGGTAGCCCCACTATCTGGATTTCTGAGGCTGGAACATaGGGGATAATACCAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MRLPASQRRRAGSPTIWISEAGT*GIIPSA Trigger: AGCGCTTGGTATTATCCCGCATGTTCCAGCCTCAGA...AATCCAGATAGTGGGGCTACCGGCCCTTCTCCTCTGAGAAGCTGGGAGCCGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR GCA 90 bp | CCACCCAGGACAGAAGTGGAGGGAACTACAGTGTTACAGTGGACACCAATCCTAAGGATCAGGCCCACTTaGAGCATCAGCCGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPRTEVEGTTVLQWTPILRIRPT*SISRWL Trigger: GAGCCAGCGGCTGATGCTGCAAGTGGGCCTGATCCT...TAGGATTGGTGTCCACTGTAACACTGTAGTTCCCTCCACTTCTGTCCTGGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR GCA 90 bp | CCACCCAGGACAGAAGTGGAGGGAACTACAGTGTTACAGTGGACACCAATCCTATGCCCGCCGATGGCCTaGATCTCCTGGTCTATCACC | + |
|
Preference number: 4 (lower is better) Translates to: PPRTEVEGTTVLQWTPILCPPMA*ISWSIT Trigger: GGTGATAGACCAGGAGATGCAGGCCATCGGCGGGCA...TAGGATTGGTGTCCACTGTAACACTGTAGTTCCCTCCACTTCTGTCCTGGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTTCCTAACACGCTCTCCCCTTCCACGAGAAGCCACTTCTGGAGAAACCACTGCCCGCCGATGGCCTaGATCTCCTGGTCTATCACC | + |
|
Preference number: 4 (lower is better) Translates to: VFPNTLSPSTRSHFWRNHCPPMA*ISWSIT Trigger: GGTGATAGACCAGGAGATGCAGGCCATCGGCGGGCA...GTGGTTTCTCCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCGTGTTAGGAAAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR GCA 90 bp | ATGCGGCTCCCAGCTTCTCAGAGGAGAAGGGCCGGTAGCCCCACTATCTGGATTTGTGCCCCACCTCAATaGCTTTGGTTTCTGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MRLPASQRRRAGSPTIWICAPPQ*LWFLSV Trigger: CACTGACAGAAACCAAAGGCATTGAGGTGGGGCACA...AATCCAGATAGTGGGGCTACCGGCCCTTCTCCTCTGAGAAGCTGGGAGCCGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTTCCTAACACGCTCTCCCCTTCCACGAGAAGCCACTTCTGGAGAAACCACACAGCCAGGGCTGGCTaGAAGGATCAGGCCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VFPNTLSPSTRSHFWRNHTARAG*KDQAHL Trigger: CAAGTGGGCCTGATCCTTCCAGCCAGCCCTGGCTGT...GTGGTTTCTCCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCGTGTTAGGAAAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCTAGGACCTCACAGACCCAACTCCATCTCCACATCCAGAAGGGAGTCTTTTGGTTTCTGTCAGTaGACCCTGGCAGTCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PALGPHRPNSISTSRRESFGFCQ*TLAVRA Trigger: TGCCCTGACTGCCAGGGTCCACTGACAGAAACCAAA...AGACTCCCTTCTGGATGTGGAGATGGAGTTGGGTCTGTGAGGTCCTAGGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR CCA 90 bp | ACAGACCCAACTCCATCTCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGAGCAAAGATTCCCCATaGGCATTGGTAAAGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TDPTPSPHPEGSLRPQQGSKDSP*ALVKRA Trigger: TGCCCTCTTTACCAATGCCCATGGGGAATCTTTGCT...CCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGAGATGGAGTTGGGTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGGTTCCAGACTATGCGGCTCCCAGCTTCTCAGAGGAGAAGGGCCGGTAGCGGTAGCCAAGCTTGTTaGCATCTTTCAGTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ARFQTMRLPASQRRRAGSGSQAC*HLSVCF Trigger: GAAACAGACTGAAAGATGCCAACAAGCTTGGCTACC...GCTACCGGCCCTTCTCCTCTGAGAAGCTGGGAGCCGCATAGTCTGGAACCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR CCA 90 bp | CTAACACGCTCTCCCCTTCCACGAGAAGCCACTTCTGGAGAAACCACCCAGGACAACCTCAAAGTGTGCTaGGTCCTCCAAGGCCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LTRSPLPREATSGETTQDNLKVC*VLQGPL Trigger: AAGAGGGCCTTGGAGGACCCAGCACACTTTGAGGTT...GTCCTGGGTGGTTTCTCCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCGTGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR TCA 90 bp | CCACCCAGGACAGAAGTGGAGGGAACTACAGTGTTACAGTGGACACCAATCCTAATGATGTATCTGCAGTaGCGGAGGCTGCAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPRTEVEGTTVLQWTPILMMYLQ*RRLQAA Trigger: GGCTGCCTGCAGCCTCCGTCACTGCAGATACATCAT...TAGGATTGGTGTCCACTGTAACACTGTAGTTCCCTCCACTTCTGTCCTGGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR GCA 90 bp | TCTCTTTGCCACCTTTCAGCCCTCCTAACAGAAGTGTCCACATGTAAAAGGAACGTCTCAGCAGCTCCCTaGCCATCAGGTCCCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLCHLSALLTEVSTCKRNVSAAP*PSGPSG Trigger: GCCGCTGGGACCTGATGGGCAGGGAGCTGCTGAGAC...GTTCCTTTTACATGTGGACACTTCTGTTAGGAGGGCTGAAAGGTGGCAAAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR GCA 90 bp | CTAACACGCTCTCCCCTTCCACGAGAAGCCACTTCTGGAGAAACCACCCAGGACTGTGCCCCACCTCAATaGCTTTGGTTTCTGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTRSPLPREATSGETTQDCAPPQ*LWFLSV Trigger: CACTGACAGAAACCAAAGGCATTGAGGTGGGGCACA...GTCCTGGGTGGTTTCTCCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCGTGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTGACCTGGGTCTCTTTGCCACCTTTCAGCCCTCCTAACAGAAGTGTCCACTGCAGCATCAGCCGCTaGCTCTTACAGGTCAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KVTWVSLPPFSPPNRSVHCSISR*LLQVRS Trigger: CGACCTGACCTGTAAGAGCCAGCGGCTGATGCTGCA...GTGGACACTTCTGTTAGGAGGGCTGAAAGGTGGCAAAGAGACCCAGGTCACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR CCA 90 bp | GAAGCCACTTCTGGAGAAACCACCCAGGACAGAAGTGGAGGGAACTACAGTGTTTGCAGCATCAGCCGCTaGCTCTTACAGGTCAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: EATSGETTQDRSGGNYSVCSISR*LLQVRS Trigger: CGACCTGACCTGTAAGAGCCAGCGGCTGATGCTGCA...AACACTGTAGTTCCCTCCACTTCTGTCCTGGGTGGTTTCTCCAGAAGTGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | ACTTCTGGAGAAACCACCCAGGACAGAAGTGGAGGGAACTACAGTGTTACAGTGCGGAGAAGTGGCAGCTaGGACAGACCACAAGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSGETTQDRSGGNYSVTVRRSGS*DRPQGG Trigger: ACCGCCTTGTGGTCTGTCCCAGCTGCCACTTCTCCG...CACTGTAACACTGTAGTTCCCTCCACTTCTGTCCTGGGTGGTTTCTCCAGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | CGCTCTCCCCTTCCACGAGAAGCCACTTCTGGAGAAACCACCCAGGACAGAAGTTCTGTCAGTGGACCCTaGCAGTCAGGGCAGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSPLPREATSGETTQDRSSVSGP*QSGQIF Trigger: AAAAATCTGCCCTGACTGCCAGGGTCCACTGACAGA...ACTTCTGTCCTGGGTGGTTTCTCCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCCTAGGACCTCACAGACCCAACTCCATCTCCACATCCAGAAGGGAGTCTTCAGTCTGTTTCCAATaGTCAGGTGGGTCCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PALGPHRPNSISTSRRESSVCFQ*SGGSCR Trigger: ACGACAGGACCCACCTGACCATTGGAAACAGACTGA...AGACTCCCTTCTGGATGTGGAGATGGAGTTGGGTCTGTGAGGTCCTAGGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | CAGACCCAACTCCATCTCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGTGGTAGCCAAGCTTGTTaGCATCTTTCAGTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTQLHLHIQKGVSGPSRGGSQAC*HLSVCF Trigger: GAAACAGACTGAAAGATGCCAACAAGCTTGGCTACC...ACCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGAGATGGAGTTGGGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR TCA 90 bp | CATGTGTCTTGTGGAGGCTCAGTGAGAGCCAGCCCTAGGACCTCACAGACCCAAACCTCACCAGTGTTCTaGGACCAAACCTCAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HVSCGGSVRASPRTSQTQTSPVF*DQTSKC Trigger: ACACTTTGAGGTTTGGTCTCAGAACACTGGTGAGGT...TTGGGTCTGTGAGGTCCTAGGGCTGGCTCTCACTGAGCCTCCACAAGACACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR GCA 90 bp | AAAGTGACCTGGGTCTCTTTGCCACCTTTCAGCCCTCCTAACAGAAGTGTCCACGATGCTGCCCACATCTaGCCTGGCCTTCATCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: KVTWVSLPPFSPPNRSVHDAAHI*PGLHPL Trigger: CAATGGATGAAGGCCAGGGCAGATGTGGGCAGCATC...GTGGACACTTCTGTTAGGAGGGCTGAAAGGTGGCAAAGAGACCCAGGTCACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | AAAGTGACCTGGGTCTCTTTGCCACCTTTCAGCCCTCCTAACAGAAGTGTCCACTTTTCTGCCCGCCGATaGCCTGCATCTCCTGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KVTWVSLPPFSPPNRSVHFSARR*PASPGL Trigger: TAGACCAGGAGATGCAGGCCATCGGCGGGCAGAAAA...GTGGACACTTCTGTTAGGAGGGCTGAAAGGTGGCAAAGAGACCCAGGTCACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | AGGAGTAGAGTTTTTCCTAACACGCTCTCCCCTTCCACGAGAAGCCACTTCTGGTTTCCAATGGTCAGGTaGGTCCTGTCGTCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSRVFPNTLSPSTRSHFWFPMVR*VLSSSR Trigger: CCTGCTGGACGACAGGACCCACCTGACCATTGGAAA...CCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCGTGTTAGGAAAAACTCTACTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | ACTTCTGGAGAAACCACCCAGGACAGAAGTGGAGGGAACTACAGTGTTACAGTGATGGCCTGCATCTCCTaGTCTATCACCCGCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSGETTQDRSGGNYSVTVMACIS*SITRTS Trigger: GCTTGTGCGGGTGATAGACCAGGAGATGCAGGCCAT...CACTGTAACACTGTAGTTCCCTCCACTTCTGTCCTGGGTGGTTTCTCCAGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | TCTCTTTGCCACCTTTCAGCCCTCCTAACAGAAGTGTCCACATGTAAAAGGAACGACCAAACCGGGGCCTaGGCTCATCCCGAAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLCHLSALLTEVSTCKRNDQTGA*AHPETS Trigger: GGAAGTTTCGGGATGAGCCCAGGCCCCGGTTTGGTC...GTTCCTTTTACATGTGGACACTTCTGTTAGGAGGGCTGAAAGGTGGCAAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGTAGAGTTTTTCCTAACACGCTCTCCCCTTCCACGAGAAGCCACTTCTGGTGCCCACATCTGCCCTaGCCTTCATCCATTGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: RSRVFPNTLSPSTRSHFWCPHLP*PSSIAI Trigger: GATTGCAATGGATGAAGGCCAGGGCAGATGTGGGCA...CCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCGTGTTAGGAAAAACTCTACTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | GAAGCCACTTCTGGAGAAACCACCCAGGACAGAAGTGGAGGGAACTACAGTGTTCTAGTATCTCTGTGTTaGCGGAGAAGTGGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EATSGETTQDRSGGNYSVLVSLC*RRSGSW Trigger: CCAGCTGCCACTTCTCCGCCAACACAGAGATACTAG...AACACTGTAGTTCCCTCCACTTCTGTCCTGGGTGGTTTCTCCAGAAGTGGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CCA 90 bp | GCATTCTCATCTTACACCCAGAAACTCAGCTCAAGGGAAAGTGACCTGGGTCTCTTTCCAATGGTCAGGTaGGTCCTGTCGTCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AFSSYTQKLSSRESDLGLFPMVR*VLSSSR Trigger: CCTGCTGGACGACAGGACCCACCTGACCATTGGAAA...GAGACCCAGGTCACTTTCCCTTGAGCTGAGTTTCTGGGTGTAAGATGAGAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR CCA 90 bp | CTTACACCCAGAAACTCAGCTCAAGGGAAAGTGACCTGGGTCTCTTTGCCACCTCCACCTCAATGCCTTTaGTTTCTGTCAGTGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTPRNSAQGKVTWVSLPPPPQCL*FLSVDP Trigger: AGGGTCCACTGACAGAAACCAAAGGCATTGAGGTGG...AGGTGGCAAAGAGACCCAGGTCACTTTCCCTTGAGCTGAGTTTCTGGGTGTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR CCA 90 bp | CCACCCAGGACAGAAGTGGAGGGAACTACAGTGTTACAGTGGACACCAATCCTACCACCTCAATGCCTTTaGTTTCTGTCAGTGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPRTEVEGTTVLQWTPILPPQCL*FLSVDP Trigger: AGGGTCCACTGACAGAAACCAAAGGCATTGAGGTGG...TAGGATTGGTGTCCACTGTAACACTGTAGTTCCCTCCACTTCTGTCCTGGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| 3UTR CAA 72 bp | AGAAACTCAGCTCAAGGGAAAGTGACCTGGGTCTCTTaGCCACCTTTCAGCCCTCCTAACAGAAGTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RNSAQGKVTWVS*PPFSPPNRSVH Trigger: GTGGACACTTCTGTTAGGAGGGCTGAAAGGTGGCAAAGAGACCCAGGTCACTTTCCCTTGAGCTGAGTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTACATACAAACCATCACAAGGGAGGAGTAGAGTTTTTCCTAACACGCTCTATGATGTATCTGCAGTaGCGGAGGCTGCAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WLHTNHHKGGVEFFLTRSMMYLQ*RRLQAA Trigger: GGCTGCCTGCAGCCTCCGTCACTGCAGATACATCAT...AGAGCGTGTTAGGAAAAACTCTACTCCTCCCTTGTGATGGTTTGTATGTAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR TCA 90 bp | AAAGTGACCTGGGTCTCTTTGCCACCTTTCAGCCCTCCTAACAGAAGTGTCCACGGGGCACAGCCTCCATaGTGTCATCATATAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KVTWVSLPPFSPPNRSVHGAQPP*CHHITS Trigger: AGAAGTTATATGATGACATCATGGAGGCTGTGCCCC...GTGGACACTTCTGTTAGGAGGGCTGAAAGGTGGCAAAGAGACCCAGGTCACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR TCA 90 bp | GCATTCTCATCTTACACCCAGAAACTCAGCTCAAGGGAAAGTGACCTGGGTCTCGCACCTGGAGAAAAATaGGTCACGTGGGATGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: AFSSYTQKLSSRESDLGLAPGEK*VTWDDD Trigger: ATCGTCATCCCACGTGACTCATTTTTCTCCAGGTGC...GAGACCCAGGTCACTTTCCCTTGAGCTGAGTTTCTGGGTGTAAGATGAGAATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106781.2 |
||
| CDS-3UTR CCA 90 bp | ACTTCTGGAGAAACCACCCAGGACAGAAGTGGAGGGAACTACAGTGTTACAGTGCCTTCCATGACACCCTaGCACCTGGAGAAAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSGETTQDRSGGNYSVTVPSMTP*HLEKNE Trigger: CTCATTTTTCTCCAGGTGCCAGGGTGTCATGGAAGG...CACTGTAACACTGTAGTTCCCTCCACTTCTGTCCTGGGTGGTTTCTCCAGAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106781.2 |
||
| CDS-3UTR CCA 90 bp | ACTTCTGGAGAAACCACCCAGGACAGAAGTGGAGGGAACTACAGTGTTACAGTGAGCAAAGATTCCCCATaGGCATTGGTAAAGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSGETTQDRSGGNYSVTVSKDSP*ALVKRA Trigger: TGCCCTCTTTACCAATGCCCATGGGGAATCTTTGCT...CACTGTAACACTGTAGTTCCCTCCACTTCTGTCCTGGGTGGTTTCTCCAGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTGCCACCTTTCAGCCCTCCTAACAGAAGTGTCCACATGTAAAAGGAACAACCTCAAAGTGTGCTaGGTCCTCCAAGGCCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLCHLSALLTEVSTCKRNNLKVC*VLQGPL Trigger: AAGAGGGCCTTGGAGGACCCAGCACACTTTGAGGTT...GTTCCTTTTACATGTGGACACTTCTGTTAGGAGGGCTGAAAGGTGGCAAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTGCCACCTTTCAGCCCTCCTAACAGAAGTGTCCACATGTAAAAGGAACTCTGTCAGTGGACCCTaGCAGTCAGGGCAGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLCHLSALLTEVSTCKRNSVSGP*QSGQIF Trigger: AAAAATCTGCCCTGACTGCCAGGGTCCACTGACAGA...GTTCCTTTTACATGTGGACACTTCTGTTAGGAGGGCTGAAAGGTGGCAAAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS CCA 90 bp | CCTGCCCATCAGGTCCCAGCGGCTGGTGGCCCGCCACAGCTCAGCTaGGCTGAGGCTGGGCATGTTGATTTTCTGCCCGCCGATGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PAHQVPAAGGPPQLS*AEAGHVDFLPADGL Trigger: CAGGCCATCGGCGGGCAGAAAATCAACATGCCCAGCCTCAGCCCAGCTGAGCTGTGGCGGGCCACCAGCCGCTGGGACCTGATGGGCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS GCA 90 bp | GCCCGCCACAGCTCAGCTGGGCTGAGGCTGGGCATGTTGATTTTCTaGCCGCCGATGGCCTGCATCTCCTGGTCTATCACCCGCACAAGC | + |
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Preference number: 5 (lower is better) Translates to: ARHSSAGLRLGMLIF*PPMACISWSITRTS Trigger: GCTTGTGCGGGTGATAGACCAGGAGATGCAGGCCATCGGCGGGCAGAAAATCAACATGCCCAGCCTCAGCCCAGCTGAGCTGTGGCGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 ENSMUST00000106782.2 |
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| CDS GCA 90 bp | GCTGGGCTGAGGCTGGGCATGTTGATTTTCTGCCCGCCGATGGCCTaGATCTCCTGGTCTATCACCCGCACAAGCTTCTCCACGGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: AGLRLGMLIFCPPMA*ISWSITRTSFSTAR Trigger: GCGTGCCGTGGAGAAGCTTGTGCGGGTGATAGACCAGGAGATGCAGGCCATCGGCGGGCAGAAAATCAACATGCCCAGCCTCAGCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 ENSMUST00000106782.2 |
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| CDS GCA 90 bp | GCGGGGCCAGCGGATGCAGTCTTCCGTAGAGAGAACTTCGATGGCTaGAGCCAGGATCCGAGTGACTCCCAGCCCGTAGCACCCCATTTC | + |
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Preference number: 5 (lower is better) Translates to: AGPADAVFRRENFDG*SQDPSDSQPVAPHF Trigger: GAAATGGGGTGCTACGGGCTGGGAGTCACTCGGATCCTGGCTGCAGCCATCGAAGTTCTCTCTACGGAAGACTGCATCCGCTGGCCCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS CCA 90 bp | CCAGGGCTGGCTGGAAGGATCAGGCCCACTTGCAGCATCAGCCGCTaGCTCTTACAGGTCAGGTCGCTAGCTCTGCCCTCCAGAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGLAGRIRPTCSISR*LLQVRSLALPSRES Trigger: GCTTTCTCTGGAGGGCAGAGCTAGCGACCTGACCTGTAAGAGCCAGCGGCTGATGCTGCAAGTGGGCCTGATCCTTCCAGCCAGCCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 ENSMUST00000106782.2 |
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| CDS-3UTR CAA 90 bp | GCCAGGTTCCAGACTATGCGGCTCCCAGCTTCTCAGAGGAGAAGGGCCGGTAGCAAGGATCAGGCCCACTaGCAGCATCAGCCGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ARFQTMRLPASQRRRAGSKDQAH*QHQPLA Trigger: AGCCAGCGGCTGATGCTGCAAGTGGGCCTGATCCTT...GCTACCGGCCCTTCTCCTCTGAGAAGCTGGGAGCCGCATAGTCTGGAACCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CAA 90 bp | GCCCCAGCAGGGGTGTGGGTGTGTCGAGTCACCAGTGAATTAGCAGCAGCCAGGGGGGATGACACAGACTaGGTAAGGGGCAAGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: APAGVWVCRVTSELAAARGDDTD*VRGKEA Trigger: CGCCTCCTTGCCCCTTACCAAGTCTGTGTCATCCCC...CCTGGCTGCTGCTAATTCACTGGTGACTCGACACACCCACACCCCTGCTGGGGC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS TCA 90 bp | AGCAGACCTTCCATGACACCCTGGCACCAGCAGCAACTCAATACCTaGGTCGGGCGCTCTTCAGTCACGCAAAGCCAGTGCGCCTGCGCC | + |
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Preference number: 5 (lower is better) Translates to: SRPSMTPWHQQQLNT*VGRSSVTQSQCACA Trigger: GGCGCAGGCGCACTGGCTTTGCGTGACTGAAGAGCGCCCGACTCAGGTATTGAGTTGCTGCTGGTGCCAGGGTGTCATGGAAGGTCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106782.2 |
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| CDS-3UTR CAA 90 bp | AGACCCAACTCCATCTCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGTGGGGGATGACACAGACTaGGTAAGGGGCAAGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RPNSISTSRRESQAPAGVGDDTD*VRGKEA Trigger: CGCCTCCTTGCCCCTTACCAAGTCTGTGTCATCCCC...CACCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGAGATGGAGTTGGGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS GCA 90 bp | CCAGAGAAAGCACCTGGTCTTCCCGAAGGTTCTGAGGCTGGAACATaGGGGATAATACCAAGCGCTGCCCTCTCCCGGGCGCACGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: PEKAPGLPEGSEAGT*GIIPSAALSRAHDG Trigger: ACCATCGTGCGCCCGGGAGAGGGCAGCGCTTGGTATTATCCCGCATGTTCCAGCCTCAGAACCTTCGGGAAGACCAGGTGCTTTCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 ENSMUST00000106782.2 |
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| CDS CCA 90 bp | GGCACGCACTGTATAGGGCATGAGGTGGTAACAGCCAGGGCTGGCTaGAAGGATCAGGCCCACTTGCAGCATCAGCCGCTGGCTCTTACA | + |
|
Preference number: 5 (lower is better) Translates to: GTHCIGHEVVTARAG*KDQAHLQHQPLALT Trigger: TGTAAGAGCCAGCGGCTGATGCTGCAAGTGGGCCTGATCCTTCCAGCCAGCCCTGGCTGTTACCACCTCATGCCCTATACAGTGCGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 ENSMUST00000106782.2 |
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| CDS CCA 90 bp | ACCACAAGGCGGTCCTCTCCAATGTCCACTGGTAGCTGGAATTCATaGGACATCGTGCCCCCGATGCTGCCCACATCTGCCCTGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: TTRRSSPMSTGSWNS*DIVPPMLPTSALAF Trigger: GAAGGCCAGGGCAGATGTGGGCAGCATCGGGGGCACGATGTCCCATGAATTCCAGCTACCAGTGGACATTGGAGAGGACCGCCTTGTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS CCA 90 bp | CTGGGACAGACCACAAGGCGGTCCTCTCCAATGTCCACTGGTAGCTaGAATTCATGGGACATCGTGCCCCCGATGCTGCCCACATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGQTTRRSSPMSTGS*NSWDIVPPMLPTSA Trigger: GGCAGATGTGGGCAGCATCGGGGGCACGATGTCCCATGAATTCCAGCTACCAGTGGACATTGGAGAGGACCGCCTTGTGGTCTGTCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CAA 90 bp | TCTCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGTGTGGGTGTGTCGAGCCCACCTCAATGCCTTaGGTTTCTGTCAGTGGACCC | + |
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Preference number: 5 (lower is better) Translates to: SPHPEGSLRPQQGCGCVEPTSMP*VSVSGP Trigger: GGGTCCACTGACAGAAACCAAAGGCATTGAGGTGGG...CTCGACACACCCACACCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CAA 90 bp | GCCAGGTTCCAGACTATGCGGCTCCCAGCTTCTCAGAGGAGAAGGGCCGGTAGCTCCTCCAAGGCCCTCTaGCCCGCAATGATCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ARFQTMRLPASQRRRAGSSSKAL*PAMITK Trigger: CTTTGTGATCATTGCGGGCAAGAGGGCCTTGGAGGA...GCTACCGGCCCTTCTCCTCTGAGAAGCTGGGAGCCGCATAGTCTGGAACCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS TCA 90 bp | CTAGCTCTGCCCTCCAGAGAAAGCACCTGGTCTTCCCGAAGGTTCTaGGGCTGGAACATGCGGGATAATACCAAGCGCTGCCCTCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: LALPSRESTWSSRRF*GWNMRDNTKRCPLP Trigger: CGGGAGAGGGCAGCGCTTGGTATTATCCCGCATGTTCCAGCCTCAGAACCTTCGGGAAGACCAGGTGCTTTCTCTGGAGGGCAGAGCTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 ENSMUST00000106782.2 |
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| CDS TCA 90 bp | CTATCACCCGCACAAGCTTCTCCACGGCACGCACTGTATAGGGCATaGGGTGGTAACAGCCAGGGCTGGCTGGAAGGATCAGGCCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LSPAQASPRHALYRA*GGNSQGWLEGSGPL Trigger: AAGTGGGCCTGATCCTTCCAGCCAGCCCTGGCTGTTACCACCTCATGCCCTATACAGTGCGTGCCGTGGAGAAGCTTGTGCGGGTGATAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 ENSMUST00000106782.2 |
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| CDS-3UTR CAA 90 bp | CTAACACGCTCTCCCCTTCCACGAGAAGCCACTTCTGGAGAAACCACCCAGGACAAGGATCAGGCCCACTaGCAGCATCAGCCGCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: LTRSPLPREATSGETTQDKDQAH*QHQPLA Trigger: AGCCAGCGGCTGATGCTGCAAGTGGGCCTGATCCTT...GTCCTGGGTGGTTTCTCCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCGTGTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS GCA 90 bp | TGTCCACTGGTAGCTGGAATTCATGGGACATCGTGCCCCCGATGCTaGCCACATCTGCCCTGGCCTTCATCCATTGCAATCCCAGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CPLVAGIHGTSCPRC*PHLPWPSSIAIPAC Trigger: ACAGGCTGGGATTGCAATGGATGAAGGCCAGGGCAGATGTGGGCAGCATCGGGGGCACGATGTCCCATGAATTCCAGCTACCAGTGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS GCA 90 bp | CAATGTCCACTGGTAGCTGGAATTCATGGGACATCGTGCCCCCGATaGTGCCCACATCTGCCCTGGCCTTCATCCATTGCAATCCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: QCPLVAGIHGTSCPR*CPHLPWPSSIAIPA Trigger: GGCTGGGATTGCAATGGATGAAGGCCAGGGCAGATGTGGGCAGCATCGGGGGCACGATGTCCCATGAATTCCAGCTACCAGTGGACATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS GCA 90 bp | GGTCCTCTCCAATGTCCACTGGTAGCTGGAATTCATGGGACATCGTaGCCCCGATGCTGCCCACATCTGCCCTGGCCTTCATCCATTGCA | + |
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Preference number: 5 (lower is better) Translates to: GPLQCPLVAGIHGTS*PRCCPHLPWPSSIA Trigger: TGCAATGGATGAAGGCCAGGGCAGATGTGGGCAGCATCGGGGGCACGATGTCCCATGAATTCCAGCTACCAGTGGACATTGGAGAGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CAA 90 bp | GGAGGCTCAGTGAGAGCCAGCCCTAGGACCTCACAGACCCAACTCCATCTCCACTCCATGACTCCCTCTTaGGTGAGGAAGACCACCTCA | + |
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Preference number: 5 (lower is better) Translates to: GGSVRASPRTSQTQLHLHSMTPS*VRKTTS Trigger: TGAGGTGGTCTTCCTCACCAAAGAGGGAGTCATGGA...GTGGAGATGGAGTTGGGTCTGTGAGGTCCTAGGGCTGGCTCTCACTGAGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS TCA 90 bp | CAGCCAAGGCAGACAGTGTTCTGCATCTTGTCAGCAGACCTTCCATaGCACCCTGGCACCAGCAGCAACTCAATACCTGAGTCGGGCGCT | + |
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Preference number: 5 (lower is better) Translates to: QPRQTVFCILSADLP*HPGTSSNSIPESGA Trigger: AGCGCCCGACTCAGGTATTGAGTTGCTGCTGGTGCCAGGGTGTCATGGAAGGTCTGCTGACAAGATGCAGAACACTGTCTGCCTTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106782.2 |
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| CDS CCA 90 bp | GGAATTCATGGGACATCGTGCCCCCGATGCTGCCCACATCTGCCCTaGCCTTCATCCATTGCAATCCCAGCCTGTCAAACAGCCTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: GIHGTSCPRCCPHLP*PSSIAIPACQTAYS Trigger: ACTGTAGGCTGTTTGACAGGCTGGGATTGCAATGGATGAAGGCCAGGGCAGATGTGGGCAGCATCGGGGGCACGATGTCCCATGAATTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS CCA 90 bp | ATGGTCAGGTGGGTCCTGTCGTCCAGCAGGACCTCCCCTCGGAGCTaGGGCACAGCCTCCATGATGTCATCATATAACTTCTCCACAATC | + |
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Preference number: 5 (lower is better) Translates to: MVRWVLSSSRTSPRS*GTASMMSSYNFSTI Trigger: GATTGTGGAGAAGTTATATGATGACATCATGGAGGCTGTGCCCCAGCTCCGAGGGGAGGTCCTGCTGGACGACAGGACCCACCTGACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS CCA 90 bp | CAAAGGGGTAGCCAAGCTTGTTGGCATCTTTCAGTCTGTTTCCAATaGTCAGGTGGGTCCTGTCGTCCAGCAGGACCTCCCCTCGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QRGSQACWHLSVCFQ*SGGSCRPAGPPLGA Trigger: AGCTCCGAGGGGAGGTCCTGCTGGACGACAGGACCCACCTGACCATTGGAAACAGACTGAAAGATGCCAACAAGCTTGGCTACCCCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS TCA 90 bp | TGTCGTCCAGCAGGACCTCCCCTCGGAGCTGGGGCACAGCCTCCATaGTGTCATCATATAACTTCTCCACAATCTCTGTGGCTGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CRPAGPPLGAGAQPP*CHHITSPQSLWLLS Trigger: AGACAGCAGCCACAGAGATTGTGGAGAAGTTATATGATGACATCATGGAGGCTGTGCCCCAGCTCCGAGGGGAGGTCCTGCTGGACGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS GCA 90 bp | GAGGAAGACCACCTCACCAGTGTTCTGAGACCAAACCTCAAAGTGTaGTGGGTCCTCCAAGGCCCTCTTGCCCGCAATGATCACAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EEDHLTSVLRPNLKV*WVLQGPLARNDHKG Trigger: CCCTTTGTGATCATTGCGGGCAAGAGGGCCTTGGAGGACCCAGCACACTTTGAGGTTTGGTCTCAGAACACTGGTGAGGTGGTCTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CAA 90 bp | CGCTCTCCCCTTCCACGAGAAGCCACTTCTGGAGAAACCACCCAGGACAGAAGTTCCATGACTCCCTCTTaGGTGAGGAAGACCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSPLPREATSGETTQDRSSMTPS*VRKTTS Trigger: TGAGGTGGTCTTCCTCACCAAAGAGGGAGTCATGGA...ACTTCTGTCCTGGGTGGTTTCTCCAGAAGTGGCTTCTCGTGGAAGGGGAGAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS TCA 90 bp | GAAAGTTTCTTCTGGGAGGCAACCAGGGCTGTAACCGCTTCCTCATaGGTCGGTCCCAAGCAGTACTCTTTGCCGTGCCTGTCTCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ESFFWEATRAVTASS*VGPKQYSLPCLSLS Trigger: ACTGAGAGACAGGCACGGCAAAGAGTACTGCTTGGGACCGACTCATGAGGAAGCGGTTACAGCCCTGGTTGCCTCCCAGAAGAAACTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS TCA 90 bp | TCCATGACTCCCTCTTTGGTGAGGAAGACCACCTCACCAGTGTTCTaGGACCAAACCTCAAAGTGTGCTGGGTCCTCCAAGGCCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SMTPSLVRKTTSPVF*DQTSKCAGSSKALL Trigger: CAAGAGGGCCTTGGAGGACCCAGCACACTTTGAGGTTTGGTCTCAGAACACTGGTGAGGTGGTCTTCCTCACCAAAGAGGGAGTCATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS CCA 90 bp | GAAGACCACCTCACCAGTGTTCTGAGACCAAACCTCAAAGTGTGCTaGGTCCTCCAAGGCCCTCTTGCCCGCAATGATCACAAAGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: EDHLTSVLRPNLKVC*VLQGPLARNDHKGV Trigger: TACCCCTTTGTGATCATTGCGGGCAAGAGGGCCTTGGAGGACCCAGCACACTTTGAGGTTTGGTCTCAGAACACTGGTGAGGTGGTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS CCA 90 bp | TTTGTGACAAGTCTAGTATCTCTGTGTTGGCGGAGAAGTGGCAGCTaGGACAGACCACAAGGCGGTCCTCTCCAATGTCCACTGGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FVTSLVSLCWRRSGS*DRPQGGPLQCPLVA Trigger: AGCTACCAGTGGACATTGGAGAGGACCGCCTTGTGGTCTGTCCCAGCTGCCACTTCTCCGCCAACACAGAGATACTAGACTTGTCACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CAA 90 bp | GCATTCTCATCTTACACCCAGAAACTCAGCTCAAGGGAAAGTGACCTGGGTCTCCTGAGGCTGGGCATGTaGATTTTCTGCCCGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: AFSSYTQKLSSRESDLGLLRLGM*IFCPPM Trigger: CATCGGCGGGCAGAAAATCAACATGCCCAGCCTCAG...GAGACCCAGGTCACTTTCCCTTGAGCTGAGTTTCTGGGTGTAAGATGAGAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CAA 90 bp | ACTTCTGGAGAAACCACCCAGGACAGAAGTGGAGGGAACTACAGTGTTACAGTGCTGAGGCTGGGCATGTaGATTTTCTGCCCGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: TSGETTQDRSGGNYSVTVLRLGM*IFCPPM Trigger: CATCGGCGGGCAGAAAATCAACATGCCCAGCCTCAG...CACTGTAACACTGTAGTTCCCTCCACTTCTGTCCTGGGTGGTTTCTCCAGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CAA 90 bp | CTTACACCCAGAAACTCAGCTCAAGGGAAAGTGACCTGGGTCTCTTTGCCACCTTCCTCCAAGGCCCTCTaGCCCGCAATGATCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTPRNSAQGKVTWVSLPPSSKAL*PAMITK Trigger: CTTTGTGATCATTGCGGGCAAGAGGGCCTTGGAGGA...AGGTGGCAAAGAGACCCAGGTCACTTTCCCTTGAGCTGAGTTTCTGGGTGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS TCA 90 bp | AAACCTCAAAGTGTGCTGGGTCCTCCAAGGCCCTCTTGCCCGCAATaGTCACAAAGGGGTAGCCAAGCTTGTTGGCATCTTTCAGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KPQSVLGPPRPSCPQ*SQRGSQACWHLSVC Trigger: ACAGACTGAAAGATGCCAACAAGCTTGGCTACCCCTTTGTGATCATTGCGGGCAAGAGGGCCTTGGAGGACCCAGCACACTTTGAGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CAA 90 bp | CAGACCCAACTCCATCTCCACATCCAGAAGGGAGTCTCAGGCCCCAGCAGGGGTTTGGTAAAGAGGGCATaGAAAATGGAAGAGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: QTQLHLHIQKGVSGPSRGLVKRA*KMEEYL Trigger: CAAGTACTCTTCCATTTTCAATGCCCTCTTTACCAA...ACCCCTGCTGGGGCCTGAGACTCCCTTCTGGATGTGGAGATGGAGTTGGGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS CCA 90 bp | GCAGACAGTGTTCTGCATCTTGTCAGCAGACCTTCCATGACACCCTaGCACCTGGAGAAAAATGAGTCACGTGGGATGACGATTAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: ADSVLHLVSRPSMTP*HLEKNESRGMTINL Trigger: CAAGTTAATCGTCATCCCACGTGACTCATTTTTCTCCAGGTGCCAGGGTGTCATGGAAGGTCTGCTGACAAGATGCAGAACACTGTCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106781.2 |
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| CDS-3UTR CAA 90 bp | CCACCCAGGACAGAAGTGGAGGGAACTACAGTGTTACAGTGGACACCAATCCTAGATTCCCCATGGGCATaGGTAAAGAGGGCATTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PPRTEVEGTTVLQWTPILDSPWA*VKRALK Trigger: TTTCAATGCCCTCTTTACCAATGCCCATGGGGAATC...TAGGATTGGTGTCCACTGTAACACTGTAGTTCCCTCCACTTCTGTCCTGGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CAA 90 bp | GCATTCTCATCTTACACCCAGAAACTCAGCTCAAGGGAAAGTGACCTGGGTCTCGATTCCCCATGGGCATaGGTAAAGAGGGCATTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AFSSYTQKLSSRESDLGLDSPWA*VKRALK Trigger: TTTCAATGCCCTCTTTACCAATGCCCATGGGGAATC...GAGACCCAGGTCACTTTCCCTTGAGCTGAGTTTCTGGGTGTAAGATGAGAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS-3UTR CAA 90 bp | TCTCTTTGCCACCTTTCAGCCCTCCTAACAGAAGTGTCCACATGTAAAAGGAACTTGGTAAAGAGGGCATaGAAAATGGAAGAGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLCHLSALLTEVSTCKRNLVKRA*KMEEYL Trigger: CAAGTACTCTTCCATTTTCAATGCCCTCTTTACCAA...GTTCCTTTTACATGTGGACACTTCTGTTAGGAGGGCTGAAAGGTGGCAAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS CAA 90 bp | CGGCTGGTGGCCCGCCACAGCTCAGCTGGGCTGAGGCTGGGCATGTaGATTTTCTGCCCGCCGATGGCCTGCATCTCCTGGTCTATCACC | + |
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Preference number: 6 (lower is better) Translates to: RLVARHSSAGLRLGM*IFCPPMACISWSIT Trigger: GGTGATAGACCAGGAGATGCAGGCCATCGGCGGGCAGAAAATCAACATGCCCAGCCTCAGCCCAGCTGAGCTGTGGCGGGCCACCAGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 ENSMUST00000106782.2 |
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| CDS GCA 72 bp | GCACCTGGTCTTCCCGAAGGTTCTGAGGCTGGAACATaGGGGATAATACCAAGCGCTGCCCTCTCCCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: APGLPEGSEAGT*GIIPSAALSRA Trigger: CGCCCGGGAGAGGGCAGCGCTTGGTATTATCCCGCATGTTCCAGCCTCAGAACCTTCGGGAAGACCAGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 ENSMUST00000106782.2 |
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| CDS CCA 72 bp | GCTGGAAGGATCAGGCCCACTTGCAGCATCAGCCGCTaGCTCTTACAGGTCAGGTCGCTAGCTCTGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: AGRIRPTCSISR*LLQVRSLALPS Trigger: GGAGGGCAGAGCTAGCGACCTGACCTGTAAGAGCCAGCGGCTGATGCTGCAAGTGGGCCTGATCCTTCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 ENSMUST00000106782.2 |
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| CDS CAA 72 bp | GTAACAGCCAGGGCTGGCTGGAAGGATCAGGCCCACTaGCAGCATCAGCCGCTGGCTCTTACAGGTCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: VTARAGWKDQAH*QHQPLALTGQV Trigger: GACCTGACCTGTAAGAGCCAGCGGCTGATGCTGCAAGTGGGCCTGATCCTTCCAGCCAGCCCTGGCTGTTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 ENSMUST00000106782.2 |
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| CDS CAA 90 bp | CATGAGGTGGTAACAGCCAGGGCTGGCTGGAAGGATCAGGCCCACTaGCAGCATCAGCCGCTGGCTCTTACAGGTCAGGTCGCTAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: HEVVTARAGWKDQAH*QHQPLALTGQVASS Trigger: AGAGCTAGCGACCTGACCTGTAAGAGCCAGCGGCTGATGCTGCAAGTGGGCCTGATCCTTCCAGCCAGCCCTGGCTGTTACCACCTCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 ENSMUST00000106782.2 |
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| CDS GCA 72 bp | GCGGATGCAGTCTTCCGTAGAGAGAACTTCGATGGCTaGAGCCAGGATCCGAGTGACTCCCAGCCCGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: ADAVFRRENFDG*SQDPSDSQPVA Trigger: TGCTACGGGCTGGGAGTCACTCGGATCCTGGCTGCAGCCATCGAAGTTCTCTCTACGGAAGACTGCATCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS CCA 72 bp | CGGTCCTCTCCAATGTCCACTGGTAGCTGGAATTCATaGGACATCGTGCCCCCGATGCTGCCCACATCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RSSPMSTGSWNS*DIVPPMLPTSA Trigger: GGCAGATGTGGGCAGCATCGGGGGCACGATGTCCCATGAATTCCAGCTACCAGTGGACATTGGAGAGGACCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS CCA 72 bp | ACCACAAGGCGGTCCTCTCCAATGTCCACTGGTAGCTaGAATTCATGGGACATCGTGCCCCCGATGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: TTRRSSPMSTGS*NSWDIVPPMLP Trigger: GGGCAGCATCGGGGGCACGATGTCCCATGAATTCCAGCTACCAGTGGACATTGGAGAGGACCGCCTTGTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS TCA 72 bp | GCACAAGCTTCTCCACGGCACGCACTGTATAGGGCATaGGGTGGTAACAGCCAGGGCTGGCTGGAAGGATCA | + |
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Preference number: 6 (lower is better) Translates to: AQASPRHALYRA*GGNSQGWLEGS Trigger: TGATCCTTCCAGCCAGCCCTGGCTGTTACCACCTCATGCCCTATACAGTGCGTGCCGTGGAGAAGCTTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 ENSMUST00000106782.2 |
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| CDS TCA 72 bp | TTCTGGGAGGCAACCAGGGCTGTAACCGCTTCCTCATaGGTCGGTCCCAAGCAGTACTCTTTGCCGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: FWEATRAVTASS*VGPKQYSLPCL Trigger: CAGGCACGGCAAAGAGTACTGCTTGGGACCGACTCATGAGGAAGCGGTTACAGCCCTGGTTGCCTCCCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS TCA 72 bp | TCCATGACACCCTGGCACCAGCAGCAACTCAATACCTaGGTCGGGCGCTCTTCAGTCACGCAAAGCCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: SMTPWHQQQLNT*VGRSSVTQSQC Trigger: GCACTGGCTTTGCGTGACTGAAGAGCGCCCGACTCAGGTATTGAGTTGCTGCTGGTGCCAGGGTGTCATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106782.2 |
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| CDS GCA 72 bp | AGGCTGGGCATGTTGATTTTCTGCCCGCCGATGGCCTaGATCTCCTGGTCTATCACCCGCACAAGCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RLGMLIFCPPMA*ISWSITRTSFS Trigger: GGAGAAGCTTGTGCGGGTGATAGACCAGGAGATGCAGGCCATCGGCGGGCAGAAAATCAACATGCCCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 ENSMUST00000106782.2 |
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| CDS GCA 72 bp | CTGGTAGCTGGAATTCATGGGACATCGTGCCCCCGATaGTGCCCACATCTGCCCTGGCCTTCATCCATTGCA | + |
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Preference number: 6 (lower is better) Translates to: LVAGIHGTSCPR*CPHLPWPSSIA Trigger: TGCAATGGATGAAGGCCAGGGCAGATGTGGGCAGCATCGGGGGCACGATGTCCCATGAATTCCAGCTACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS GCA 72 bp | CAATGTCCACTGGTAGCTGGAATTCATGGGACATCGTaGCCCCGATGCTGCCCACATCTGCCCTGGCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QCPLVAGIHGTS*PRCCPHLPWPS Trigger: TGAAGGCCAGGGCAGATGTGGGCAGCATCGGGGGCACGATGTCCCATGAATTCCAGCTACCAGTGGACATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS CCA 72 bp | ATGTTGATTTTCTGCCCGCCGATGGCCTGCATCTCCTaGTCTATCACCCGCACAAGCTTCTCCACGGCACGC | + |
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Preference number: 6 (lower is better) Translates to: MLIFCPPMACIS*SITRTSFSTAR Trigger: GCGTGCCGTGGAGAAGCTTGTGCGGGTGATAGACCAGGAGATGCAGGCCATCGGCGGGCAGAAAATCAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 ENSMUST00000106782.2 |
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| CDS CAA 90 bp | CATCGTGCCCCCGATGCTGCCCACATCTGCCCTGGCCTTCATCCATaGCAATCCCAGCCTGTCAAACAGCCTACAGTAAGCATCACACAC | + |
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Preference number: 6 (lower is better) Translates to: HRAPDAAHICPGLHP*QSQPVKQPTVSITH Trigger: GTGTGTGATGCTTACTGTAGGCTGTTTGACAGGCTGGGATTGCAATGGATGAAGGCCAGGGCAGATGTGGGCAGCATCGGGGGCACGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS TCA 72 bp | CCCTCCAGAGAAAGCACCTGGTCTTCCCGAAGGTTCTaGGGCTGGAACATGCGGGATAATACCAAGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PSRESTWSSRRF*GWNMRDNTKRC Trigger: GCAGCGCTTGGTATTATCCCGCATGTTCCAGCCTCAGAACCTTCGGGAAGACCAGGTGCTTTCTCTGGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 ENSMUST00000106782.2 |
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| CDS GCA 72 bp | GTAGCTGGAATTCATGGGACATCGTGCCCCCGATGCTaGCCACATCTGCCCTGGCCTTCATCCATTGCAATC | + |
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Preference number: 6 (lower is better) Translates to: VAGIHGTSCPRC*PHLPWPSSIAI Trigger: GATTGCAATGGATGAAGGCCAGGGCAGATGTGGGCAGCATCGGGGGCACGATGTCCCATGAATTCCAGCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS CCA 72 bp | TTGTTGGCATCTTTCAGTCTGTTTCCAATGGTCAGGTaGGTCCTGTCGTCCAGCAGGACCTCCCCTCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LLASFSLFPMVR*VLSSSRTSPRS Trigger: GCTCCGAGGGGAGGTCCTGCTGGACGACAGGACCCACCTGACCATTGGAAACAGACTGAAAGATGCCAACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS CAA 72 bp | CCCGATGCTGCCCACATCTGCCCTGGCCTTCATCCATaGCAATCCCAGCCTGTCAAACAGCCTACAGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: PDAAHICPGLHP*QSQPVKQPTVS Trigger: GCTTACTGTAGGCTGTTTGACAGGCTGGGATTGCAATGGATGAAGGCCAGGGCAGATGTGGGCAGCATCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS TCA 72 bp | AGTGTGCTGGGTCCTCCAAGGCCCTCTTGCCCGCAATaGTCACAAAGGGGTAGCCAAGCTTGTTGGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: SVLGPPRPSCPQ*SQRGSQACWHL Trigger: AAGATGCCAACAAGCTTGGCTACCCCTTTGTGATCATTGCGGGCAAGAGGGCCTTGGAGGACCCAGCACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS CCA 72 bp | AGTCTAGTATCTCTGTGTTGGCGGAGAAGTGGCAGCTaGGACAGACCACAAGGCGGTCCTCTCCAATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SLVSLCWRRSGS*DRPQGGPLQCP Trigger: TGGACATTGGAGAGGACCGCCTTGTGGTCTGTCCCAGCTGCCACTTCTCCGCCAACACAGAGATACTAGACT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS CCA 72 bp | TGTGACAAGTCTAGTATCTCTGTGTTGGCGGAGAAGTaGCAGCTGGGACAGACCACAAGGCGGTCCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: CDKSSISVLAEK*QLGQTTRRSSP Trigger: TGGAGAGGACCGCCTTGTGGTCTGTCCCAGCTGCCACTTCTCCGCCAACACAGAGATACTAGACTTGTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058905.8 ENSMUST00000106781.2 |
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| CDS TCA 72 bp | CAGACAGTGTTCTGCATCTTGTCAGCAGACCTTCCATaGCACCCTGGCACCAGCAGCAACTCAATACCTGAG | + |
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Preference number: 6 (lower is better) Translates to: QTVFCILSADLP*HPGTSSNSIPE Trigger: CTCAGGTATTGAGTTGCTGCTGGTGCCAGGGTGTCATGGAAGGTCTGCTGACAAGATGCAGAACACTGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106782.2 |
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| CDS TCA 72 bp | CACCCTGGCACCTGGAGAAAAATGAGTCACGTGGGATaGCGATTAACTTGGTTCTCAGCACGGGATCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: HPGTWRKMSHVG*RLTWFSARDPR Trigger: TCTTGGATCCCGTGCTGAGAACCAAGTTAATCGTCATCCCACGTGACTCATTTTTCTCCAGGTGCCAGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106781.2 |
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| CDS TCA 72 bp | CAGACAGTGTTCTGCATCTTGTCAGCAGACCTTCCATaGCACCCTGGCACCTGGAGAAAAATGAGTCACGTG | + |
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Preference number: 6 (lower is better) Translates to: QTVFCILSADLP*HPGTWRKMSHV Trigger: CACGTGACTCATTTTTCTCCAGGTGCCAGGGTGTCATGGAAGGTCTGCTGACAAGATGCAGAACACTGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106781.2 |
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| CDS CAA 90 bp | CCCTGGCACCTGGAGAAAAATGAGTCACGTGGGATGACGATTAACTaGGTTCTCAGCACGGGATCCAAGATGTGGATCCTTCCATGTCTA | + |
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Preference number: 6 (lower is better) Translates to: PWHLEKNESRGMTIN*VLSTGSKMWILPCL Trigger: TAGACATGGAAGGATCCACATCTTGGATCCCGTGCTGAGAACCAAGTTAATCGTCATCCCACGTGACTCATTTTTCTCCAGGTGCCAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106781.2 |
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| CDS CAA 72 bp | CTGGAGAAAAATGAGTCACGTGGGATGACGATTAACTaGGTTCTCAGCACGGGATCCAAGATGTGGATCCTT | + |
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Preference number: 6 (lower is better) Translates to: LEKNESRGMTIN*VLSTGSKMWIL Trigger: AAGGATCCACATCTTGGATCCCGTGCTGAGAACCAAGTTAATCGTCATCCCACGTGACTCATTTTTCTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106781.2 |
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