Pregenerated sensors for PARP9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022906Ensembl transcript IDs: ENSMUST00000023622.13, ENSMUST00000114878.8, ENSMUST00000122870.2, ENSMUST00000159160.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATGATGCTAGTGTGTGGTCGGTGCCTTTAGTGACCCCATCATTCTaGACAGGTAACCTGTTATTTATCATTTTGTCAGTTCTCTCAACC | + |
|
Preference number: 1 (lower is better) Translates to: YDASVWSVPLVTPSF*TGNLLFIILSVLST Trigger: GGTTGAGAGAACTGACAAAATGATAAATAACAGGTTACCTGTTCAGAATGATGGGGTCACTAAAGGCACCGACCACACACTAGCATCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCGTGACCCCATCATTCTaGACAGGTAACCTGTTATTT | + |
|
Preference number: 2 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVVTPSF*TGNLLF Trigger: AAATAACAGGTTACCTGTTCAGAATGATGGGGTCAC...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTGCTCCCTGCTAGAGTTGGACAGCTCAGGGTAGAGATGCATCCAAACTTAAGACTGCAAGATGTGTaGTTCACATCCTTCTTAATT | + |
|
Preference number: 3 (lower is better) Translates to: ELLPARVGQLRVEMHPNLRLQDV*FTSFLI Trigger: AATTAAGAAGGATGTGAACAACACATCTTGCAGTCT...TAAGTTTGGATGCATCTCTACCCTGAGCTGTCCAACTCTAGCAGGGAGCAGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122870.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCCTGTTATTTATCATTTaGTCAGTTCTCTCAACCCCT | + |
|
Preference number: 3 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVLLFII*SVLSTP Trigger: AGGGGTTGAGAGAACTGACAAAATGATAAATAACAG...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| 3UTR TCA 72 bp | ATGCATCCAAACTTATTTTGGAGGACTTCACATAGCTaGCTCTCATTGCTCTTTAAAATTTCGAAGACATTG | + |
|
Preference number: 3 (lower is better) Translates to: MHPNLFWRTSHS*LSLLFKISKTL Trigger: CAATGTCTTCGAAATTTTAAAGAGCAATGAGAGTCAGCTATGTGAAGTCCTCCAAAATAAGTTTGGATGCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122870.2 |
||
| CDS-3UTR TCA 90 bp | ATCAAGTTAGTTCACAGCCTCTATAGCTATTTGGTACTAAAGTTCACCTCAGCAGGGATAGTCTCCTTCTaGGTGCCCTCTTCTGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IKLVHSLYSYLVLKFTSAGIVSF*VPSSAL Trigger: CAGCGCAGAAGAGGGCACTCAGAAGGAGACTATCCC...TGCTGAGGTGAACTTTAGTACCAAATAGCTATAGAGGCTGTGAACTAACTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122870.2 |
||
| CDS-3UTR TCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCCTTCTGAAGACTCTCTaGGCAGGAGAGCTGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVLLKTL*AGELLP Trigger: AGGGAGCAGCTCTCCTGCTCAGAGAGTCTTCAGAAG...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCGGATCAGGGTCCTTCTaGAGACTCTCTGAGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVGSGSF*RLSEQE Trigger: CTCCTGCTCAGAGAGTCTTCAGAAGGACCCTGATCC...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTCTGAGCAGGAGAGCTaGTCCCTGCTAGAGTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVSEQES*SLLELD Trigger: GTCCAACTCTAGCAGGGAGCAGCTCTCCTGCTCAGA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTCAAGAGAATTGTTGGTGCATTTTTAAGACTGCAAGATGTGTTGTTCACACTGAGTGCCCTCTTCTaGGCTGAGGAAAGAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FFKRIVGAFLRLQDVLFTLSALF*AEERAQ Trigger: CTGAGCTCTTTCCTCAGCGCAGAAGAGGGCACTCAG...TGTGAACAACACATCTTGCAGTCTTAAAAATGCACCAACAATTCTCTTGAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122870.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTCTATCTGCTCCACCTaGACAACCCACAAGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVSICST*TTHKPH Trigger: GTGTGGCTTGTGGGTTGTGCAGGTGGAGCAGATAGA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTTCTTTGCTCCCCACTaGACCACTGCAGGGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVFFAPH*TTAGLK Trigger: CTTTAGCCCTGCAGTGGTCCAGTGGGGAGCAAAGAA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTGGAGACTCTTGTGCTaGTCTGGAGCTCAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVWRLLC*SGAQTA Trigger: TGCTGTCTGAGCTCCAGACCAGCACAAGAGTCTCCA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCGCTCCCAGATCCCTTTaGCGTCCTCTCTTCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVAPRSL*RPLFHH Trigger: ATGATGGAAGAGAGGACGCCAAAGGGATCTGGGAGC...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CCA 90 bp | TCATTGCATCTTTCAATATCTTTAATCCCAACACTCGAAGCAGAGACAGGTCAAGGACCGGTCTCCACCTaGTATTTGTTGATTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLHLSISLIPTLEAETGQGPVST*YLLIWE Trigger: TTCCCAAATCAACAAATACCAGGTGGAGACCGGTCC...TTGACCTGTCTCTGCTTCGAGTGTTGGGATTAAAGATATTGAAAGATGCAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159160.2 |
||
| CDS-3UTR TCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTGGCCGTTCTTGGACTaGCAGTCTCTGAAATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVWPFLD*QSLKWR Trigger: TCTCCATTTCAGAGACTGTCAGTCCAAGAACGGCCA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCCCTGCCACTTCTTCCTaGACGTCACACAGCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVPATSS*TSHSIH Trigger: ATGTATGCTGTGTGACGTTCAGGAAGAAGTGGCAGG...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCCAGTGGGGTCCTCATTaGTCACCAGATGAATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVQWGPH*SPDESL Trigger: GAGAGATTCATCTGGTGAGCAATGAGGACCCCACTG...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR GCA 90 bp | TCATTGCATCTTTCAATATCTTTAATCCCAACACTCGAAGCAGAGACAGGTCAAGATTTGGGAATGCCATaGCACATGGAAGACATACTG | + |
|
Preference number: 4 (lower is better) Translates to: SLHLSISLIPTLEAETGQDLGMP*HMEDIL Trigger: CAGTATGTCTTCCATGTGGCATGGCATTCCCAAATC...TTGACCTGTCTCTGCTTCGAGTGTTGGGATTAAAGATATTGAAAGATGCAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159160.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCCTCTGCACACCGTATTaGAGAACTGATGTGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVLCTPY*RTDVGP Trigger: AGGTCCCACATCAGTTCTGCAATACGGTGTGCAGAG...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTGCGAAGAGTCATGGTaGAAGCAGGGTCAGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVCEESW*KQGQFL Trigger: CAGAAACTGACCCTGCTTCCACCATGACTCTTCGCA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCGTTTTTCTTGCTGGTTaGTCCCCTGTCCTGACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVVFLAG*SPVLTS Trigger: GCTTGTCAGGACAGGGGACCAACCAGCAAGAAAAAC...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTGGACTGACAGTCTCTaGAATGGAGACTCTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVWTDSL*NGDSCA Trigger: AGCACAAGAGTCTCCATTTCAGAGACTGTCAGTCCA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCGTTGGTCCCCTGTCCTaGCAAGCTCCAAAGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVVGPLS*QAPKIF Trigger: AAAAATCTTTGGAGCTTGTCAGGACAGGGGACCAAC...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGAGAATTGTTGGTGCATTTTTAAGACTGCAAGATGTGTTGTTCACATCAAAGGCTTTCTTAAATaGGAGGGAGAGAGAGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQENCWCIFKTARCVVHIKGFLK*EGERGD Trigger: ATCGCCTCTCTCTCCCTCTCATTTAAGAAAGCCTTT...GATGTGAACAACACATCTTGCAGTCTTAAAAATGCACCAACAATTCTCTTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122870.2 |
||
| CDS-3UTR GCA 90 bp | TCATTGCATCTTTCAATATCTTTAATCCCAACACTCGAAGCAGAGACAGGTCAATTGTTGATTTGGGAATaGCATGCCACATGGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SLHLSISLIPTLEAETGQLLIWE*HATWKT Trigger: TGTCTTCCATGTGGCATGGCATTCCCAAATCAACAA...TTGACCTGTCTCTGCTTCGAGTGTTGGGATTAAAGATATTGAAAGATGCAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159160.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCAAATGGAGACTCTTGTaGTGGTCTGGAGCTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVKWRLL*WSGAQT Trigger: TGTCTGAGCTCCAGACCAGCACAAGAGTCTCCATTT...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCATGTCCTATCCTGTGTaGAAGTCCACAAGTACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVMSYPV*KSTSTG Trigger: CCCTGTACTTGTGGACTTGCACACAGGATAGGACAT...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCGCCAGGCCACTTCCATaGAAAAGGTTTTCATTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVARPLP*KRFSLA Trigger: AGCCAATGAAAACCTTTTGCATGGAAGTGGCCTGGC...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS-3UTR CCA 90 bp | TCATTGCATCTTTCAATATCTTTAATCCCAACACTCGAAGCAGAGACAGGTCAAATTTCAATACAGCCTTaGACAATCTGGAGAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLHLSISLIPTLEAETGQISIQP*TIWRVR Trigger: CCTGACTCTCCAGATTGTCCAAGGCTGTATTGAAAT...TTGACCTGTCTCTGCTTCGAGTGTTGGGATTAAAGATATTGAAAGATGCAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159160.2 |
||
| CDS-3UTR CCA 90 bp | TCATTGCATCTTTCAATATCTTTAATCCCAACACTCGAAGCAGAGACAGGTCAATGGTATTTGTTGATTTaGGAATGCCATGCCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLHLSISLIPTLEAETGQWYLLI*ECHATW Trigger: CCATGTGGCATGGCATTCCCAAATCAACAAATACCA...TTGACCTGTCTCTGCTTCGAGTGTTGGGATTAAAGATATTGAAAGATGCAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159160.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTTATTCTCAATGATGTaGTGGTCCAGGGAGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVLFSMM*WSRETS Trigger: GCTGGTCTCCCTGGACCACCACATCATTGAGAATAA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCATTTTCTTCTTCTCTTaGAAGGCAGCCAGCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVIFFFS*KAASST Trigger: GGTGCTGCTGGCTGCCTTCCAAGAGAAGAAGAAAAT...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCGATTTGGGAATGCCATaGCACATGGAAGACATACTG | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVDLGMP*HMEDIL Trigger: CAGTATGTCTTCCATGTGGCATGGCATTCCCAAATC...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTTCAATCCTCATAACTaGGTCAATGAGGTCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVFNPHN*VNEVSL Trigger: CAGGCTGACCTCATTGACGCAGTTATGAGGATTGAA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTTATCCAGTTTTTCTTaGTGGTTGGTCCCCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVLSSFS*WLVPCP Trigger: AGGACAGGGGACCAACCAGCAAGAAAAACTGGATAA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTACAGGGGCATGGCCTaGATGCCATTAAAAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVYRGMA*MPLKTT Trigger: TGTTGTTTTTAATGGCATGCAGGCCATGCCCCTGTA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCAAGGTTTTCATTGGCTaGGTTCACCACAGCATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVKVFIG*VHHSIN Trigger: GTTGATGCTGTGGTGAACGCAGCCAATGAAAACCTT...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTCAATGAGGTCAGCCTaGGGACCTTTAATCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVSMRSA*GPLISK Trigger: TTTGGAGATTAAAGGTCCCCAGGCTGACCTCATTGA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCCAATGGTTTCAGGGCTaGAAACATTGTCAACTACGC | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVQWFQG*KHCQLR Trigger: GCGTAGTTGACAATGTTTCCAGCCCTGAAACCATTG...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCGCAAAAGGTTTTCATTaGCTGCGTTCACCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVAKGFH*LRSPQH Trigger: ATGCTGTGGTGAACGCAGCCAATGAAAACCTTTTGC...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTCCAGAGCTCAGGGCTaGAATTGCTACTGTCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVSRAQG*NCYCLN Trigger: ATTAAGACAGTAGCAATTCCAGCCCTGAGCTCTGGA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCAAATCCAGAGGGAACTaGAAAATTCCAGAGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVKSRGN*KIPELR Trigger: CCTGAGCTCTGGAATTTTCCAGTTCCCTCTGGATTT...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTCATTGCTCACCAGATaGATCTCTCTCAAATTACCG | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVSLLTR*ISLKLP Trigger: CGGTAATTTGAGAGAGATTCATCTGGTGAGCAATGA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR TCA 90 bp | TCATTGCATCTTTCAATATCTTTAATCCCAACACTCGAAGCAGAGACAGGTCAAACATGGAAGACATACTaGCAGGACAATTTAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLHLSISLIPTLEAETGQTWKTY*QDNLNP Trigger: AGGATTTAAATTGTCCTGTCAGTATGTCTTCCATGT...TTGACCTGTCTCTGCTTCGAGTGTTGGGATTAAAGATATTGAAAGATGCAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159160.2 |
||
| CDS-3UTR TCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTATGATTATTCTCAATaGTGTGGTGGTCCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVYDYSQ*CGGPGR Trigger: TCTCCCTGGACCACCACATCATTGAGAATAATCATA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTGGAGGGATGATATTTaGGGAATTACCCTGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVWRDDI*GITLTE Trigger: TTCTGTCAGGGTAATTCCTCAAATATCATCCCTCCA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTCAATGGTGGAGGGATaGTATTTGAGGAATTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVSMVEG*YLRNYP Trigger: AGGGTAATTCCTCAAATATCATCCCTCCACCATTGA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTTGTTGATTTGGGAATaGCATGCCACATGGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVLLIWE*HATWKT Trigger: TGTCTTCCATGTGGCATGGCATTCCCAAATCAACAA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCATTTCAATACAGCCTTaGACAATCTGGAGAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVISIQP*TIWRVR Trigger: CCTGACTCTCCAGATTGTCCAAGGCTGTATTGAAAT...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTGGTATTTGTTGATTTaGGAATGCCATGCCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVWYLLI*ECHATW Trigger: CCATGTGGCATGGCATTCCCAAATCAACAAATACCA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTGCTTGAGGTTTTCTTaGCCTTGTCTGCTAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVCLRFS*PCLLDF Trigger: AAAATCTAGCAGACAAGGTCAAGAAAACCTCAAGCA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTACCAACGTTGGCAATaGTTCTTTTGCTCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVYQRWQ*FFCSLL Trigger: AAGAAGAGAGCAAAAGAATCATTGCCAACGTTGGTA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCCGTCTCCACATCTACTaGAAAGATCACAATCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVRLHIY*KDHNLY Trigger: GTAAAGATTGTGATCTTTCCAGTAGATGTGGAGACG...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCACATGGAAGACATACTaGCAGGACAATTTAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVTWKTY*QDNLNP Trigger: AGGATTTAAATTGTCCTGTCAGTATGTCTTCCATGT...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCAAACATTATCTGAGCTaGTGTACTCTTCTTCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVKHYLS*CTLLQI Trigger: GATTTGAAGAAGAGTACAGCAGCTCAGATAATGTTT...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCGTGCTCTTTAGCAAATaGAAAAACTTCCTCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVVLFSK*KNFLKH Trigger: ATGTTTGAGGAAGTTTTTGCATTTGCTAAAGAGCAC...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS TCA 90 bp | CCCTCTTCTGCGCTGAGGAAAGAGCTCAGCAAAGGCTTTCTTAAATaGGAGGGAGAGAGAGGCGATCATACCTGGTCTTTCGGCGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSSALRKELSKGFLK*EGERGDHTWSFGGS Trigger: GCTCCCGCCGAAAGACCAGGTATGATCGCCTCTCTCTCCCTCTCATTTAAGAAAGCCTTTGCTGAGCTCTTTCCTCAGCGCAGAAGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122870.2 |
||
| CDS GCA 90 bp | ATGAGATTGATGGCAGGAGATCCAGCTTCAAGGCCGCCTCTTCTTTaGTCCCCACTGGACCACTGCAGGGCTAAAGCACCACTATTACCG | + |
|
Preference number: 5 (lower is better) Translates to: MRLMAGDPASRPPLL*SPLDHCRAKAPLLP Trigger: CGGTAATAGTGGTGCTTTAGCCCTGCAGTGGTCCAGTGGGGAGCAAAGAAGAGGCGGCCTTGAAGCTGGATCTCCTGCCATCAATCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS TCA 90 bp | ACAGATAACTCTATCCCAGGGATCAGGGTCCTTCTGAAGACTCTCTaGGCAGGAGAGCTGCTCCCTGCTAGAGTTGGACAGCTCAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TDNSIPGIRVLLKTL*AGELLPARVGQLRV Trigger: TACCCTGAGCTGTCCAACTCTAGCAGGGAGCAGCTCTCCTGCTCAGAGAGTCTTCAGAAGGACCCTGATCCCTGGGATAGAGTTATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS TCA 90 bp | CATCCTTCCAGACAGATAACTCTATCCCAGGGATCAGGGTCCTTCTaGAGACTCTCTGAGCAGGAGAGCTGCTCCCTGCTAGAGTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HPSRQITLSQGSGSF*RLSEQESCSLLELD Trigger: GTCCAACTCTAGCAGGGAGCAGCTCTCCTGCTCAGAGAGTCTTCAGAAGGACCCTGATCCCTGGGATAGAGTTATCTGTCTGGAAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS CCA 90 bp | CATTCTGTGGAAGCCGACTCTGCACACCGTATTGCAGAACTGATGTaGGACCTGCTGAAACAACCTTTGGCTCCCAGATCCCTTTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: HSVEADSAHRIAELM*DLLKQPLAPRSLWR Trigger: ACGCCAAAGGGATCTGGGAGCCAAAGGTTGTTTCAGCAGGTCCCACATCAGTTCTGCAATACGGTGTGCAGAGTCGGCTTCCACAGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS GCA 90 bp | CAAGCTTCCGGCCAGGCCACTTCCATGCAAAAGGTTTTCATTGGCTaGGTTCACCACAGCATCAACAACGTGTCTGGTAAGGTCATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QASGQATSMQKVFIG*VHHSINNVSGKVIL Trigger: AAGGATGACCTTACCAGACACGTTGTTGATGCTGTGGTGAACGCAGCCAATGAAAACCTTTTGCATGGAAGTGGCCTGGCCGGAAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS CCA 90 bp | ATGATGTGGTGGTCCAGGGAGACCAGCAACCTTTCAATCCATTCCTaGGCCTCACACATCTCTCCCACTTTTACACCCATGAGATTGATG | + |
|
Preference number: 5 (lower is better) Translates to: MMWWSRETSNLSIHS*ASHISPTFTPMRLM Trigger: CATCAATCTCATGGGTGTAAAAGTGGGAGAGATGTGTGAGGCCCAGGAATGGATTGAAAGGTTGCTGGTCTCCCTGGACCACCACATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CCA 90 bp | CACAGCATACATTCAATCCTCATAACTGCGTCAATGAGGTCAGCCTaGGGACCTTTAATCTCCAAAGTGGCCGTTCTTGGACTGACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HSIHSILITASMRSA*GPLISKVAVLGLTV Trigger: GACTGTCAGTCCAAGAACGGCCACTTTGGAGATTAAAGGTCCCCAGGCTGACCTCATTGACGCAGTTATGAGGATTGAATGTATGCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS GCA 90 bp | CACTTCTTCCTGAACGTCACACAGCATACATTCAATCCTCATAACTaGGTCAATGAGGTCAGCCTGGGGACCTTTAATCTCCAAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HFFLNVTQHTFNPHN*VNEVSLGTFNLQSG Trigger: GCCACTTTGGAGATTAAAGGTCCCCAGGCTGACCTCATTGACGCAGTTATGAGGATTGAATGTATGCTGTGTGACGTTCAGGAAGAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS GCA 90 bp | AAACTGGGTTATAGGATGTCGAATACATTCTGTGGAAGCCGACTCTaGACACCGTATTGCAGAACTGATGTGGGACCTGCTGAAACAACC | + |
|
Preference number: 5 (lower is better) Translates to: KLGYRMSNTFCGSRL*TPYCRTDVGPAETT Trigger: GGTTGTTTCAGCAGGTCCCACATCAGTTCTGCAATACGGTGTGCAGAGTCGGCTTCCACAGAATGTATTCGACATCCTATAACCCAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CCA 90 bp | CCAGAATTAACAATTACATCTGTTGTTTGCATTTCAATACAGCCTTaGACAATCTGGAGAGTCAGGCCCCGGCCGATGCGAAGAGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: PELTITSVVCISIQP*TIWRVRPRPMRRVM Trigger: CATGACTCTTCGCATCGGCCGGGGCCTGACTCTCCAGATTGTCCAAGGCTGTATTGAAATGCAAACAACAGATGTAATTGTTAATTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 ENSMUST00000159160.2 |
||
| CDS CCA 90 bp | AATGGGAATTTGCCATCTATAATGTTCTTCAAGAGAATTGTTGGCTaGTCTTTCGGCGGGAGCTGCCGCCCATGTATCCATGTAATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NGNLPSIMFFKRIVG*SFGGSCRPCIHVIG Trigger: GCCTATTACATGGATACATGGGCGGCAGCTCCCGCCGAAAGACCAGCCAACAATTCTCTTGAAGAACATTATAGATGGCAAATTCCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCAAGGCCGCCTCTTCTTaGCTCCCCACTGGACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVKAASS*LPTGPL Trigger: CAGTGGTCCAGTGGGGAGCAAAGAAGAGGCGGCCTT...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS GCA 90 bp | CTTGGGACCGGTCTCCACCTGGTATTTGTTGATTTGGGAATGCCATaGCACATGGAAGACATACTGACAGGACAATTTAAATCCTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LGTGLHLVFVDLGMP*HMEDILTGQFKSFC Trigger: ACAAAAGGATTTAAATTGTCCTGTCAGTATGTCTTCCATGTGGCATGGCATTCCCAAATCAACAAATACCAGGTGGAGACCGGTCCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159160.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCGGCTCCCAGATCCCTTaGGCGTCCTCTCTTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVGSQIP*ASSLPS Trigger: TGATGGAAGAGAGGACGCCAAAGGGATCTGGGAGCC...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS GCA 90 bp | GTGCTCTTTAGCAAATGCAAAAACTTCCTCAAACATTATCTGAGCTaGTGTACTCTTCTTCAAATCCATCAATCCTGTCCCGAGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLFSKCKNFLKHYLS*CTLLQIHQSCPESR Trigger: CCTGCTCTCGGGACAGGATTGATGGATTTGAAGAAGAGTACAGCAGCTCAGATAATGTTTGAGGAAGTTTTTGCATTTGCTAAAGAGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCGCCAGCAGCACCTTATaGTCTATCTGCTCCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVASSTL*SICSTC Trigger: GCAGGTGGAGCAGATAGACAATAAGGTGCTGCTGGC...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCCTGCTGAAACAACCTTaGGCTCCCAGATCCCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVLLKQP*APRSLW Trigger: CCAAAGGGATCTGGGAGCCAAAGGTTGTTTCAGCAG...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | TCATTGCATCTTTCAATATCTTTAATCCCAACACTCGAAGCAGAGACAGGTCAATCCACCTGGTATTTGTaGATTTGGGAATGCCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLHLSISLIPTLEAETGQSTWYL*IWECHA Trigger: GGCATGGCATTCCCAAATCAACAAATACCAGGTGGA...TTGACCTGTCTCTGCTTCGAGTGTTGGGATTAAAGATATTGAAAGATGCAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159160.2 |
||
| CDS TCA 90 bp | TCCTTGTGCTCTTTAGCAAATGCAAAAACTTCCTCAAACATTATCTaGGCTGCTGTACTCTTCTTCAAATCCATCAATCCTGTCCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLCSLANAKTSSNII*AAVLFFKSINPVPR Trigger: TCTCGGGACAGGATTGATGGATTTGAAGAAGAGTACAGCAGCTCAGATAATGTTTGAGGAAGTTTTTGCATTTGCTAAAGAGCACAAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CCA 90 bp | CGGATAGTTTCTAAAATTATGCTTGTACACAAATCCAGAGGGAACTaGAAAATTCCAGAGCTCAGGGCTGGAATTGCTACTGTCTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: RIVSKIMLVHKSRGN*KIPELRAGIATVLM Trigger: CATTAAGACAGTAGCAATTCCAGCCCTGAGCTCTGGAATTTTCCAGTTCCCTCTGGATTTGTGTACAAGCATAATTTTAGAAACTATCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCAGTTTTTCTTGCTGGTaGGTCCCCTGTCCTGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVSFSCW*VPCPDK Trigger: CTTGTCAGGACAGGGGACCAACCAGCAAGAAAAACT...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCCATTTTCTTCTTCTCTaGGAAGGCAGCCAGCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVHFLLL*EGSQQH Trigger: GTGCTGCTGGCTGCCTTCCAAGAGAAGAAGAAAATG...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTCTTCAAGAGAATTGTaGGCTGGTCTTTCGGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVSSREL*AGLSAG Trigger: TCCCGCCGAAAGACCAGCCAACAATTCTCTTGAAGA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | TCATTGCATCTTTCAATATCTTTAATCCCAACACTCGAAGCAGAGACAGGTCAAGTCTCCACCTGGTATTaGTTGATTTGGGAATGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLHLSISLIPTLEAETGQVSTWY*LIWECH Trigger: ATGGCATTCCCAAATCAACAAATACCAGGTGGAGAC...TTGACCTGTCTCTGCTTCGAGTGTTGGGATTAAAGATATTGAAAGATGCAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159160.2 |
||
| CDS TCA 90 bp | CATTTCAACCCCTGCTTGTCTAAGAATCGACTGTGCCACTCGTCCTaGTTTAAAATCCTGCATGTATCCAGAATTAACAATTACATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HFNPCLSKNRLCHSS*FKILHVSRINNYIC Trigger: ACAGATGTAATTGTTAATTCTGGATACATGCAGGATTTTAAATCAGGACGAGTGGCACAGTCGATTCTTAGACAAGCAGGGGTTGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 ENSMUST00000159160.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTTTACACCCATGAGATaGATGGCAGGAGATCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVFTPMR*MAGDPA Trigger: AGCTGGATCTCCTGCCATCAATCTCATGGGTGTAAA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTCAGGGCTGGAAACATaGTCAACTACGCTGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVSGLET*STTLSL Trigger: CAATGACAGCGTAGTTGACAATGTTTCCAGCCCTGA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTGCAAAAGGTTTTCATaGGCTGCGTTCACCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVCKRFS*AAFTTA Trigger: TGCTGTGGTGAACGCAGCCAATGAAAACCTTTTGCA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS CCA 90 bp | TTAAGGCATTTTTCTAGACAGGACTTCATTGCATCTTTCAATATCTaGTATTTGTTGATTTGGGAATGCCATGCCACATGGAAGACATAC | + |
|
Preference number: 5 (lower is better) Translates to: LRHFSRQDFIASFNI*YLLIWECHATWKTY Trigger: GTATGTCTTCCATGTGGCATGGCATTCCCAAATCAACAAATACCAGATATTGAAAGATGCAATGAAGTCCTGTCTAGAAAAATGCCTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCAGATTTTTGAGGCTCTaGGTGAAATATATGCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVRFLRL*VKYMPA Trigger: AGCCGGCATATATTTCACCAAGAGCCTCAAAAATCT...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCGTGCTTGAGGTTTTCTaGACCTTGTCTGCTAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVVLEVF*TLSARF Trigger: AAATCTAGCAGACAAGGTCAAGAAAACCTCAAGCAC...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS GCA 90 bp | CATTGCATCTTTCAATATCTGGTATTTGTTGATTTGGGAATGCCATaGCACATGGAAGACATACTGACAGGACAATTTAAATCCTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HCIFQYLVFVDLGMP*HMEDILTGQFKSFC Trigger: ACAAAAGGATTTAAATTGTCCTGTCAGTATGTCTTCCATGTGGCATGGCATTCCCAAATCAACAAATACCAGATATTGAAAGATGCAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCAATATCTGGTATTTGTaGATTTGGGAATGCCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVNIWYL*IWECHA Trigger: GGCATGGCATTCCCAAATCAACAAATACCAGATATT...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCCTAGACAGGACTTCATaGCATCTTTCAATATCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVLDRTS*HLSISG Trigger: ACCAGATATTGAAAGATGCAATGAAGTCCTGTCTAG...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCGAGATTTTACCAACGTaGGCAATGATTCTTTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVEILPT*AMILLL Trigger: GAGCAAAAGAATCATTGCCAACGTTGGTAAAATCTC...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCGAACATTTGCTTGTCTaGGAAATAAAGCCGGATAGT | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVEHLLV*EIKPDS Trigger: ACTATCCGGCTTTATTTCCAAGACAAGCAAATGTTC...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTATATAAAGTATTCTTGCTGTCACCTATAGGAAAGGAGATGAAAGATGTCTTGGCAATGATTCTTTaGCTCTCTTCTTGGATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VLYKVFLLSPIGKEMKDVLAMIL*LSSWIS Trigger: TGAAATCCAAGAAGAGAGCAAAAGAATCATTGCCAA...GACATCTTTCATCTCCTTTCCTATAGGTGACAGCAAGAATACTTTATATAGAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS GCA 72 bp | AGCCTTGGACAATCTGGAGAGTCAGGCCCCGGCCGATaGGAAGAGTCATGGTGGAAGCAGGGTCAGTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLGQSGESGPGR*EESWWKQGQFL Trigger: CAGAAACTGACCCTGCTTCCACCATGACTCTTCGCATCGGCCGGGGCCTGACTCTCCAGATTGTCCAAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS GCA 72 bp | ATGGCAGGAGATCCAGCTTCAAGGCCGCCTCTTCTTTaGTCCCCACTGGACCACTGCAGGGCTAAAGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: MAGDPASRPPLL*SPLDHCRAKAP Trigger: TGGTGCTTTAGCCCTGCAGTGGTCCAGTGGGGAGCAAAGAAGAGGCGGCCTTGAAGCTGGATCTCCTGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS TCA 72 bp | TCTATCCCAGGGATCAGGGTCCTTCTGAAGACTCTCTaGGCAGGAGAGCTGCTCCCTGCTAGAGTTGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: SIPGIRVLLKTL*AGELLPARVGQ Trigger: CTGTCCAACTCTAGCAGGGAGCAGCTCTCCTGCTCAGAGAGTCTTCAGAAGGACCCTGATCCCTGGGATAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS CCA 72 bp | TGGCTGTTCGTAACTGTCCACCGAGGTCCAACCGCATaGATAATCAAATGGCAAGGAAGTCTCCCCGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: WLFVTVHRGPTA*IIKWQGSLPAP Trigger: CGGTGCGGGGAGACTTCCTTGCCATTTGATTATCCATGCGGTTGGACCTCGGTGGACAGTTACGAACAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS CCA 72 bp | GAAGCCGACTCTGCACACCGTATTGCAGAACTGATGTaGGACCTGCTGAAACAACCTTTGGCTCCCAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: EADSAHRIAELM*DLLKQPLAPRS Trigger: GGATCTGGGAGCCAAAGGTTGTTTCAGCAGGTCCCACATCAGTTCTGCAATACGGTGTGCAGAGTCGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CAA 90 bp | CATTCCTGGGCCTCACACATCTCTCCCACTTTTACACCCATGAGATaGATGGCAGGAGATCCAGCTTCAAGGCCGCCTCTTCTTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HSWASHISPTFTPMR*MAGDPASRPPLLCS Trigger: GGAGCAAAGAAGAGGCGGCCTTGAAGCTGGATCTCCTGCCATCAATCTCATGGGTGTAAAAGTGGGAGAGATGTGTGAGGCCCAGGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS TCA 72 bp | AGACAGATAACTCTATCCCAGGGATCAGGGTCCTTCTaGAGACTCTCTGAGCAGGAGAGCTGCTCCCTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: RQITLSQGSGSF*RLSEQESCSLL Trigger: TAGCAGGGAGCAGCTCTCCTGCTCAGAGAGTCTTCAGAAGGACCCTGATCCCTGGGATAGAGTTATCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS CCA 72 bp | TGGTCCAGGGAGACCAGCAACCTTTCAATCCATTCCTaGGCCTCACACATCTCTCCCACTTTTACACCCATG | + |
|
Preference number: 6 (lower is better) Translates to: WSRETSNLSIHS*ASHISPTFTPM Trigger: CATGGGTGTAAAAGTGGGAGAGATGTGTGAGGCCCAGGAATGGATTGAAAGGTTGCTGGTCTCCCTGGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS GCA 72 bp | TCTTGGAAGGCAGCCAGCAGCACCTTATTGTCTATCTaGTCCACCTGCACAACCCACAAGCCACACTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SWKAASSTLLSI*STCTTHKPHFS Trigger: TGAAAAGTGTGGCTTGTGGGTTGTGCAGGTGGAGCAGATAGACAATAAGGTGCTGCTGGCTGCCTTCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS GCA 72 bp | GGCCAGGCCACTTCCATGCAAAAGGTTTTCATTGGCTaGGTTCACCACAGCATCAACAACGTGTCTGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: GQATSMQKVFIG*VHHSINNVSGK Trigger: CTTACCAGACACGTTGTTGATGCTGTGGTGAACGCAGCCAATGAAAACCTTTTGCATGGAAGTGGCCTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS CCA 72 bp | TCTGTTGTTTGCATTTCAATACAGCCTTGGACAATCTaGAGAGTCAGGCCCCGGCCGATGCGAAGAGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SVVCISIQPWTI*RVRPRPMRRVM Trigger: CATGACTCTTCGCATCGGCCGGGGCCTGACTCTCCAGATTGTCCAAGGCTGTATTGAAATGCAAACAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 ENSMUST00000159160.2 |
||
| CDS CAA 72 bp | TTCTTCTTCTCTTGGAAGGCAGCCAGCAGCACCTTATaGTCTATCTGCTCCACCTGCACAACCCACAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: FFFSWKAASSTL*SICSTCTTHKP Trigger: TGGCTTGTGGGTTGTGCAGGTGGAGCAGATAGACAATAAGGTGCTGCTGGCTGCCTTCCAAGAGAAGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CAA 72 bp | ATTGCAGAACTGATGTGGGACCTGCTGAAACAACCTTaGGCTCCCAGATCCCTTTGGCGTCCTCTCTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: IAELMWDLLKQP*APRSLWRPLFH Trigger: ATGGAAGAGAGGACGCCAAAGGGATCTGGGAGCCAAAGGTTGTTTCAGCAGGTCCCACATCAGTTCTGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CAA 72 bp | GTTTCAGGGCTGGAAACATTGTCAACTACGCTGTCATaGACATCTAAGGCCCCAGGACTCAATGGTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VSGLETLSTTLS*TSKAPGLNGGG Trigger: CCCTCCACCATTGAGTCCTGGGGCCTTAGATGTCAATGACAGCGTAGTTGACAATGTTTCCAGCCCTGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CAA 90 bp | ACTGATGTGGGACCTGCTGAAACAACCTTTGGCTCCCAGATCCCTTaGGCGTCCTCTCTTCCATCATTTTCTTCTTCTCTTGGAAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TDVGPAETTFGSQIP*ASSLPSFSSSLGRQ Trigger: CTGCCTTCCAAGAGAAGAAGAAAATGATGGAAGAGAGGACGCCAAAGGGATCTGGGAGCCAAAGGTTGTTTCAGCAGGTCCCACATCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CAA 90 bp | GCACACCGTATTGCAGAACTGATGTGGGACCTGCTGAAACAACCTTaGGCTCCCAGATCCCTTTGGCGTCCTCTCTTCCATCATTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AHRIAELMWDLLKQP*APRSLWRPLFHHFL Trigger: AAGAAAATGATGGAAGAGAGGACGCCAAAGGGATCTGGGAGCCAAAGGTTGTTTCAGCAGGTCCCACATCAGTTCTGCAATACGGTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS TCA 72 bp | AATCTCCAAAGTGGCCGTTCTTGGACTGACAGTCTCTaGAATGGAGACTCTTGTGCTGGTCTGGAGCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: NLQSGRSWTDSL*NGDSCAGLELR Trigger: TCTGAGCTCCAGACCAGCACAAGAGTCTCCATTTCAGAGACTGTCAGTCCAAGAACGGCCACTTTGGAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS TCA 72 bp | TTTCAGGGCTGGAAACATTGTCAACTACGCTGTCATTaGCATCTAAGGCCCCAGGACTCAATGGTGGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FQGWKHCQLRCH*HLRPQDSMVEG Trigger: TCCCTCCACCATTGAGTCCTGGGGCCTTAGATGTCAATGACAGCGTAGTTGACAATGTTTCCAGCCCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS TCA 72 bp | TGGACCACTGCAGGGCTAAAGCACCACTATTACCGCTaGGATTCAGCTCGTTGGACCTTTTTGTCATTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: WTTAGLKHHYYR*DSARWTFLSFQ Trigger: CTGAAATGACAAAAAGGTCCAACGAGCTGAATCTCAGCGGTAATAGTGGTGCTTTAGCCCTGCAGTGGTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS GCA 72 bp | TATAGGATGTCGAATACATTCTGTGGAAGCCGACTCTaGACACCGTATTGCAGAACTGATGTGGGACCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: YRMSNTFCGSRL*TPYCRTDVGPA Trigger: AGCAGGTCCCACATCAGTTCTGCAATACGGTGTGCAGAGTCGGCTTCCACAGAATGTATTCGACATCCTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CCA 72 bp | CATTCAATCCTCATAACTGCGTCAATGAGGTCAGCCTaGGGACCTTTAATCTCCAAAGTGGCCGTTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HSILITASMRSA*GPLISKVAVLG Trigger: TCCAAGAACGGCCACTTTGGAGATTAAAGGTCCCCAGGCTGACCTCATTGACGCAGTTATGAGGATTGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CCA 72 bp | TTGCCATCTATAATGTTCTTCAAGAGAATTGTTGGCTaGTCTTTCGGCGGGAGCTGCCGCCCATGTATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LPSIMFFKRIVG*SFGGSCRPCIH Trigger: ATGGATACATGGGCGGCAGCTCCCGCCGAAAGACCAGCCAACAATTCTCTTGAAGAACATTATAGATGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS CAA 72 bp | AACAATTACATCTGTTGTTTGCATTTCAATACAGCCTaGGACAATCTGGAGAGTCAGGCCCCGGCCGATGCG | + |
|
Preference number: 6 (lower is better) Translates to: NNYICCLHFNTA*DNLESQAPADA Trigger: CGCATCGGCCGGGGCCTGACTCTCCAGATTGTCCAAGGCTGTATTGAAATGCAAACAACAGATGTAATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 ENSMUST00000159160.2 |
||
| CDS CAA 72 bp | GGACCTGCTGAAACAACCTTTGGCTCCCAGATCCCTTaGGCGTCCTCTCTTCCATCATTTTCTTCTTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GPAETTFGSQIP*ASSLPSFSSSL Trigger: AAGAGAAGAAGAAAATGATGGAAGAGAGGACGCCAAAGGGATCTGGGAGCCAAAGGTTGTTTCAGCAGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CAA 72 bp | CATCTTGGGACCGGTCTCCACCTGGTATTTGTTGATTaGGGAATGCCATGCCACATGGAAGACATACTGACA | + |
|
Preference number: 6 (lower is better) Translates to: HLGTGLHLVFVD*GMPCHMEDILT Trigger: TGTCAGTATGTCTTCCATGTGGCATGGCATTCCCAAATCAACAAATACCAGGTGGAGACCGGTCCCAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159160.2 |
||
| CDS CAA 72 bp | TACTCCATCTTGGGACCGGTCTCCACCTGGTATTTGTaGATTTGGGAATGCCATGCCACATGGAAGACATAC | + |
|
Preference number: 6 (lower is better) Translates to: YSILGPVSTWYL*IWECHATWKTY Trigger: GTATGTCTTCCATGTGGCATGGCATTCCCAAATCAACAAATACCAGGTGGAGACCGGTCCCAAGATGGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159160.2 |
||
| CDS TCA 72 bp | CTCAATGGTGGAGGGATGATATTTGAGGAATTACCCTaGCAGAAGGACCCTGTGAGTACTTCTGCCTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LNGGGMIFEELP*QKDPVSTSASN Trigger: GTTTGAGGCAGAAGTACTCACAGGGTCCTTCTGTCAGGGTAATTCCTCAAATATCATCCCTCCACCATTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS GCA 72 bp | CTGAACGTCACACAGCATACATTCAATCCTCATAACTaGGTCAATGAGGTCAGCCTGGGGACCTTTAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: LNVTQHTFNPHN*VNEVSLGTFNL Trigger: GAGATTAAAGGTCCCCAGGCTGACCTCATTGACGCAGTTATGAGGATTGAATGTATGCTGTGTGACGTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CCA 72 bp | GAATTTGCCATCTATAATGTTCTTCAAGAGAATTGTTaGCTGGTCTTTCGGCGGGAGCTGCCGCCCATGTAT | + |
|
Preference number: 6 (lower is better) Translates to: EFAIYNVLQENC*LVFRRELPPMY Trigger: ATACATGGGCGGCAGCTCCCGCCGAAAGACCAGCCAACAATTCTCTTGAAGAACATTATAGATGGCAAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS CAA 90 bp | TCCAGAATTAACAATTACATCTGTTGTTTGCATTTCAATACAGCCTaGGACAATCTGGAGAGTCAGGCCCCGGCCGATGCGAAGAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SRINNYICCLHFNTA*DNLESQAPADAKSH Trigger: ATGACTCTTCGCATCGGCCGGGGCCTGACTCTCCAGATTGTCCAAGGCTGTATTGAAATGCAAACAACAGATGTAATTGTTAATTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 ENSMUST00000159160.2 |
||
| CDS CAA 90 bp | ACAACAATGGTTTCAGGGCTGGAAACATTGTCAACTACGCTGTCATaGACATCTAAGGCCCCAGGACTCAATGGTGGAGGGATGATATTT | + |
|
Preference number: 6 (lower is better) Translates to: TTMVSGLETLSTTLS*TSKAPGLNGGGMIF Trigger: AAATATCATCCCTCCACCATTGAGTCCTGGGGCCTTAGATGTCAATGACAGCGTAGTTGACAATGTTTCCAGCCCTGAAACCATTGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CAA 90 bp | GCCTGCATGCCATTAAAAACAACAATGGTTTCAGGGCTGGAAACATaGTCAACTACGCTGTCATTGACATCTAAGGCCCCAGGACTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: ACMPLKTTMVSGLET*STTLSLTSKAPGLN Trigger: ATTGAGTCCTGGGGCCTTAGATGTCAATGACAGCGTAGTTGACAATGTTTCCAGCCCTGAAACCATTGTTGTTTTTAATGGCATGCAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS TCA 72 bp | TTGATTTGGGAATGCCATGCCACATGGAAGACATACTaGCAGGACAATTTAAATCCTTTTGTGACCCACACC | + |
|
Preference number: 6 (lower is better) Translates to: LIWECHATWKTY*QDNLNPFVTHT Trigger: GGTGTGGGTCACAAAAGGATTTAAATTGTCCTGTCAGTATGTCTTCCATGTGGCATGGCATTCCCAAATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 ENSMUST00000159160.2 |
||
| CDS CAA 72 bp | CCATTAAAAACAACAATGGTTTCAGGGCTGGAAACATaGTCAACTACGCTGTCATTGACATCTAAGGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PLKTTMVSGLET*STTLSLTSKAP Trigger: TGGGGCCTTAGATGTCAATGACAGCGTAGTTGACAATGTTTCCAGCCCTGAAACCATTGTTGTTTTTAATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CAA 90 bp | GCGATTCCACCAACTGAGATTTTACCAACGTTGGCAATGATTCTTTaGCTCTCTTCTTGGATTTCAAAGCCACCAGTTTTCACCAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: AIPPTEILPTLAMIL*LSSWISKPPVFTKL Trigger: AAGCTTGGTGAAAACTGGTGGCTTTGAAATCCAAGAAGAGAGCAAAAGAATCATTGCCAACGTTGGTAAAATCTCAGTTGGTGGAATCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS TCA 72 bp | CCCTGCTTGTCTAAGAATCGACTGTGCCACTCGTCCTaGTTTAAAATCCTGCATGTATCCAGAATTAACAAT | + |
|
Preference number: 6 (lower is better) Translates to: PCLSKNRLCHSS*FKILHVSRINN Trigger: ATTGTTAATTCTGGATACATGCAGGATTTTAAATCAGGACGAGTGGCACAGTCGATTCTTAGACAAGCAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 ENSMUST00000159160.2 |
||
| CDS TCA 72 bp | CGATTCCACCAACTGAGATTTTACCAACGTTGGCAATaGTTCTTTTGCTCTCTTCTTGGATTTCAAAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RFHQLRFYQRWQ*FFCSLLGFQSH Trigger: GTGGCTTTGAAATCCAAGAAGAGAGCAAAAGAATCATTGCCAACGTTGGTAAAATCTCAGTTGGTGGAATCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS CAA 90 bp | GACATACTGACAGGACAATTTAAATCCTTTTGTGACCCACACCTCTaGATAATCTGTGGACAGGTTAACCTTGTCAAGTTCCTTTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: DILTGQFKSFCDPHL*IICGQVNLVKFLFH Trigger: ATGGAAAAGGAACTTGACAAGGTTAACCTGTCCACAGATTATCAAGAGGTGTGGGTCACAAAAGGATTTAAATTGTCCTGTCAGTATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 ENSMUST00000159160.2 |
||
| CDS GCA 72 bp | AGCAAATGCAAAAACTTCCTCAAACATTATCTGAGCTaGTGTACTCTTCTTCAAATCCATCAATCCTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SKCKNFLKHYLS*CTLLQIHQSCP Trigger: GGGACAGGATTGATGGATTTGAAGAAGAGTACAGCAGCTCAGATAATGTTTGAGGAAGTTTTTGCATTTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CAA 72 bp | ACAGGACAATTTAAATCCTTTTGTGACCCACACCTCTaGATAATCTGTGGACAGGTTAACCTTGTCAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TGQFKSFCDPHL*IICGQVNLVKF Trigger: GAACTTGACAAGGTTAACCTGTCCACAGATTATCAAGAGGTGTGGGTCACAAAAGGATTTAAATTGTCCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 ENSMUST00000159160.2 |
||
| CDS CAA 72 bp | AGACAGGACTTCATTGCATCTTTCAATATCTGGTATTaGTTGATTTGGGAATGCCATGCCACATGGAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: RQDFIASFNIWY*LIWECHATWKT Trigger: TGTCTTCCATGTGGCATGGCATTCCCAAATCAACAAATACCAGATATTGAAAGATGCAATGAAGTCCTGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CAA 72 bp | CCAACTGAGATTTTACCAACGTTGGCAATGATTCTTTaGCTCTCTTCTTGGATTTCAAAGCCACCAGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PTEILPTLAMIL*LSSWISKPPVF Trigger: GAAAACTGGTGGCTTTGAAATCCAAGAAGAGAGCAAAAGAATCATTGCCAACGTTGGTAAAATCTCAGTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114878.8 |
||
| CDS TCA 72 bp | AGGACTTCATTGCATCTTTCAATATCTGGTATTTGTTaGTTTGGGAATGCCATGCCACATGGAAGACATACT | + |
|
Preference number: 6 (lower is better) Translates to: RTSLHLSISGIC*FGNAMPHGRHT Trigger: AGTATGTCTTCCATGTGGCATGGCATTCCCAAATCAACAAATACCAGATATTGAAAGATGCAATGAAGTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CCA 72 bp | TTTTCTAGACAGGACTTCATTGCATCTTTCAATATCTaGTATTTGTTGATTTGGGAATGCCATGCCACATGG | + |
|
Preference number: 6 (lower is better) Translates to: FSRQDFIASFNI*YLLIWECHATW Trigger: CCATGTGGCATGGCATTCCCAAATCAACAAATACCAGATATTGAAAGATGCAATGAAGTCCTGTCTAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS CAA 72 bp | CTTCATTGCATCTTTCAATATCTGGTATTTGTTGATTaGGGAATGCCATGCCACATGGAAGACATACTGACA | + |
|
Preference number: 6 (lower is better) Translates to: LHCIFQYLVFVD*GMPCHMEDILT Trigger: TGTCAGTATGTCTTCCATGTGGCATGGCATTCCCAAATCAACAAATACCAGATATTGAAAGATGCAATGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||
| CDS GCA 72 bp | TGCATGTATCCAGAATTAACAATTACATCTGTTGTTTaGATTTCAATACAGCCTTGGACAATCTGGAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: CMYPELTITSVV*ISIQPWTIWRV Trigger: GACTCTCCAGATTGTCCAAGGCTGTATTGAAATGCAAACAACAGATGTAATTGTTAATTCTGGATACATGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 ENSMUST00000159160.2 |
||
| CDS GCA 72 bp | TTTCAATATCTGGTATTTGTTGATTTGGGAATGCCATaGCACATGGAAGACATACTGACAGGACAATTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: FQYLVFVDLGMP*HMEDILTGQFK Trigger: TTTAAATTGTCCTGTCAGTATGTCTTCCATGTGGCATGGCATTCCCAAATCAACAAATACCAGATATTGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023622.13 ENSMUST00000114878.8 |
||