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Pregenerated sensors for PARP4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000054509

Ensembl transcript IDs: ENSMUST00000161553.2

Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATTATTTTCTACATAGAAATATGAGAAAGGCATCAGAGCAGTGGTaGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGGCAGAT +
Preference number: 1 (lower is better)
Translates to: DYFLHRNMRKASEQW*MPLISALGMQRQAD
Trigger: ATCTGCCTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATGTAGAAAATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
3UTR CCA 90 bp TTTGATTATTTTCTACATAGAAATATGAGAAAGGCATCAGAGCAGTaGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGGCA +
Preference number: 1 (lower is better)
Translates to: FDYFLHRNMRKASEQ*WMPLISALGMQRQA
Trigger: TGCCTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATGTAGAAAATAATCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
3UTR CCA 72 bp CTACATAGAAATATGAGAAAGGCATCAGAGCAGTGGTaGATGCCTTTAATCTCAGCACTTGGAATGCAGAGG +
Preference number: 3 (lower is better)
Translates to: LHRNMRKASEQW*MPLISALGMQR
Trigger: CCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
3UTR CCA 72 bp TTTCTACATAGAAATATGAGAAAGGCATCAGAGCAGTaGTGGATGCCTTTAATCTCAGCACTTGGAATGCAG +
Preference number: 3 (lower is better)
Translates to: FLHRNMRKASEQ*WMPLISALGMQ
Trigger: CTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATGTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACGCTCCTTTCAGCTGGTaGTGCTGCTGGAGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: TWNAEAGRSLECETSLLYAPFSW*CCWSRR
Trigger: TCGCCGGCTCCAGCAGCACCACCAGCTGAAAGGAGC...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCCCTGCTCCTTTCAGCTaGTGGTGCTGCTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPPAPFS*WCCWSR
Trigger: CCGGCTCCAGCAGCACCACCAGCTGAAAGGAGCAGG...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACAGAGGGGGAGGAGGGTaGGTACCACCAAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: TWNAEAGRSLECETSLLYRGGGG*VPPRGW
Trigger: CCATCCCCTTGGTGGTACCCACCCTCCTCCCCCTCT...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACGAAGGGGGAGGAGGGTaGGTGCTGCCAGTGATAGGG +
Preference number: 4 (lower is better)
Translates to: TWNAEAGRSLECETSLLYEGGGG*VLPVIG
Trigger: CCCTATCACTGGCAGCACCCACCCTCCTCCCCCTTC...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCAGAGGGGGAGGAGGGTaGGTGCTACCAAAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPRGGGG*VLPKRG
Trigger: CCCTCTCTTTGGTAGCACCCACCCTCCTCCCCCTCT...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGAGCTGGTGGTGCTGCTaGAGCCGGCGACAGAGGATC +
Preference number: 4 (lower is better)
Translates to: ASEQWWMPLISALGMQRQSWWCC*SRRQRI
Trigger: GATCCTCTGTCGCCGGCTCCAGCAGCACCACCAGCT...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACAGCGTGTTCTCCAGGTaGCCCAGAGCTTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TWNAEAGRSLECETSLLYSVFSR*PRASVQ
Trigger: CTGGACAGAAGCTCTGGGCCACCTGGAGAACACGCT...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGGGAGGGGGAGGAATATaGGTGCCACCAGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: ASEQWWMPLISALGMQRQGGGGI*VPPGRG
Trigger: CCCTCTCCCTGGTGGCACCCATATTCCTCCCCCTCC...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACGCCACCAGGGATAGGTaGAGGGGGAGGAATATGGGT +
Preference number: 4 (lower is better)
Translates to: TWNAEAGRSLECETSLLYATRDR*RGRNMG
Trigger: ACCCATATTCCTCCCCCTCCACCTATCCCTGGTGGC...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCCTTTGGGAGAGAAGCTaGTGTTGTTGGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPLWERS*CCWGLG
Trigger: CCCAAGGCCCCAACAACATCAGCTTCTCTCCCAAAG...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGGAAGGGGGAGGAGGGTaGGTGCTGCCAGTAATAGGG +
Preference number: 4 (lower is better)
Translates to: ASEQWWMPLISALGMQRQEGGGG*VLPVIG
Trigger: CCCTATTACTGGCAGCACCCACCCTCCTCCCCCTTC...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACCGTCTTCATAATCTCTaGTTAGTGCCCGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TWNAEAGRSLECETSLLYRLHNL*LVPGLP
Trigger: TGGCAGCCCGGGCACTAATCAGAGATTATGAAGACG...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCAGCAAAGTACGTTGGTaGCAAGAGGAGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPSKVRW*QEEGQK
Trigger: CTTCTGCCCCTCCTCTTGTCACCAACGTACTTTGCT...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATACCCATGCCGGGGCCTaGAGAGGCTCGGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNTHAGA*RGSGAS
Trigger: AGATGCCCCCGAGCCTCTGCAGGCCCCGGCATGGGT...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAATCCAGCCGGTTCCCATaGAGCTGCTGCTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLESSRFP*SCCSTA
Trigger: AGCTGTGGAGCAGCAGCTGCATGGGAACCGGCTGGA...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAAGGGGAGGAGGGTGGGTaGTACCAAAGAGAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLEGEEGG*YQREGK
Trigger: CTTCCCCTCTCTTTGGTAGCACCCACCCTCCTCCCC...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCGGGGAGGAAGATGGGTaGCACCAAAGAGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPGEEDG*HQREKK
Trigger: CTTCTTCTCTCTTTGGTGGCACCCATCTTCCTCCCC...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAACAGCTCTCTGGGTCCTaGGAGCTCTGCAGCTCTACC +
Preference number: 4 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLEQLSGS*ELCSST
Trigger: GGTAGAGCTGCAGAGCTCCCAGGACCCAGAGAGCTG...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCATGGCCACAGGACTCTaGATGCTGAGTTCCGTGATG +
Preference number: 4 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPMATGL*MLSSVM
Trigger: CATCACGGAACTCAGCATCCAGAGTCCTGTGGCCAT...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTCACAGAGTCCTGGATaGATGCTGGGTTGGCAATCT +
Preference number: 4 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPSQSPG*MLGWQS
Trigger: AGATTGCCAACCCAGCATTCATCCAGGACTCTGTGA...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAACTGCGCTGTTGCAGGTaGCTGTGCTACTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLELRCCR*LCYCSP
Trigger: AGGACTGCAGTAGCACAGTCACCTGCAACAGCGCAG...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACGTCCTGGATGAATGCTaGGTTGGCAATCTGCACATC +
Preference number: 4 (lower is better)
Translates to: TWNAEAGRSLECETSLLYVLDEC*VGNLHI
Trigger: GATGTGCAGATTGCCAACCCAGCATTCATCCAGGAC...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTCACAGAGTCCTaGATGAATGCTGGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPCLTES*MNAGLA
Trigger: TGCCAACCCAGCATTCATCCAGGACTCTGTGAGACA...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAAGGAGGGGGAGGAATATaGGTGCCAGCAGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLEGGGGI*VPAERR
Trigger: CCTTCTCTCTGCTGGCACCCATATTCCTCCCCCTCC...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGGAGGGGGAGGAAGATaGGTGCCAGCAGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAEGGGGR*VPAERR
Trigger: CCTTCTCTCTGCTGGCACCCATCTTCCTCCCCCTCC...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGCTGTTATTAGGGCTCTaGTGCACTGCGGCACTTTGC +
Preference number: 4 (lower is better)
Translates to: ASEQWWMPLISALGMQRQLLLGL*CTAALC
Trigger: GCAAAGTGCCGCAGTGCATCAGAGCCCTAATAACAG...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACAAAGAGGGCACCCATaGCGGGGCCTGCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: HRNMRKASEQWWMPLISAQRGHP*RGLQRL
Trigger: GAGCCTCTGCAGGCCCCGGCATGGGTGCCCTCTTTG...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGGGGAGGAATATGGGTaGCACCAGGGAGAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNGEEYG*HQGEGE
Trigger: CTCCCCCTCTCCCTGGTGGCACCCATATTCCTCCCC...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAAAAATCGCTCACCTCCTaGCTCAGGGCGCCTGAACTA +
Preference number: 4 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLEKSLTS*LRAPEL
Trigger: TAGTTCAGGCGCCCTGAGCCAGGAGGTGAGCGATTT...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAACGTCCTGAAAGTCTGTaGGGACAGAGGTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLERPESL*GQRWFP
Trigger: CGGAAACCACCTCTGTCCCCACAGACTTTCAGGACG...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAACAGGAGAGGTGGCTCTaGGTCATGGATGTTGGTATC +
Preference number: 4 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLEQERWL*VMDVGI
Trigger: GATACCAACATCCATGACTCAGAGCCACCTCTCCTG...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGGGAAGGAAGATGGGTaGCATCAGGGAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAEGKEDG*HQGEEE
Trigger: CTCTTCCTCTCCCTGATGGCACCCATCTTCCTTCCC...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTTCAACCCACATTCTTaGGAGGTATGCATCACGCAA +
Preference number: 4 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPFNPHS*EVCITQ
Trigger: TTGCGTGATGCATACCTCCCAAGAATGTGGGTTGAA...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGGTCAGACTCTCACTCTaGAGGTGCCCATCAGATATG +
Preference number: 4 (lower is better)
Translates to: ASEQWWMPLISALGMQRQVRLSL*RCPSDM
Trigger: CATATCTGATGGGCACCTCCAGAGTGAGAGTCTGAC...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACTCTCCGACAAGTTTATaGCTGTGGCTAAGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: TWNAEAGRSLECETSLLYSPTSL*LWLSLG
Trigger: ACCTAAGCTTAGCCACAGCCATAAACTTGTCGGAGA...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACGTGTGTCACTGGAAATaGATTCAATCATGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: TWNAEAGRSLECETSLLYVCHWK*IQSCRA
Trigger: TGCCCTACATGATTGAATTCATTTCCAGTGACACAC...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGAACCAACAGCACAGGTaGACACTCTGGTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAENQQHR*TLWCAG
Trigger: TCCAGCACACCAGAGTGTTCACCTGTGCTGTTGGTT...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCCTGAAGCTCTGTAGTTaGCACCATTGTGCAAAATTC +
Preference number: 4 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPLKLCS*HHCAKF
Trigger: GAATTTTGCACAATGGTGTCAACTACAGAGCTTCAG...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACAAGTTTGCTTTCCAGTaGTCTCTCTCCTGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: TWNAEAGRSLECETSLLYKFAFQ*SLSWSF
Trigger: AAAAGACCAGGAGAGAGAGCACTGGAAAGCAAACTT...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGGTTCCCCATGGAAGGTaGTGCAGACATAATGAACTC +
Preference number: 4 (lower is better)
Translates to: ASEQWWMPLISALGMQRQVPHGR*CRHNEL
Trigger: GAGTTCATTATGTCTGCAGCACCTTCCATGGGGAAC...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGATGGAGGCCTCTGGTTaGTTTTCCTGCCAACTCACG +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAEMEASG*FSCQLT
Trigger: CGTGAGTTGGCAGGAAAAGCAACCAGAGGCCTCCAT...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAAGGGGAGGAAGATGGGTaGCACCAAAAAGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLEGEEDG*HQKEKK
Trigger: CTTCTTCTCTTTTTGGTGGCACCCATCTTCCTCCCC...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGTTGACAGAGACAGAGTaGCAACTTGGGGAACGTATC +
Preference number: 4 (lower is better)
Translates to: ASEQWWMPLISALGMQRQLTETE*QLGERI
Trigger: GATACGTTCCCCAAGTTGCCACTCTGTCTCTGTCAA...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAAGGTGGCTCTGAGTCATaGATGTTGGTATCTCCGACA +
Preference number: 4 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLEGGSES*MLVSPT
Trigger: TGTCGGAGATACCAACATCCATGACTCAGAGCCACC...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACATGTTGTTGGGGCCTTaGGAAAATTTACCTGGATCA +
Preference number: 4 (lower is better)
Translates to: TWNAEAGRSLECETSLLYMLLGP*ENLPGS
Trigger: TGATCCAGGTAAATTTTCCCAAGGCCCCAACAACAT...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAACTGCAGAAACCTCAGTaGCTTCGGTGTTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLELQKPQ*LRCFPS
Trigger: AGAAGGAAAACACCGAAGTCACTGAGGTTTCTGCAG...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGTCTCTCCTGGTCTTTTaGTCAGCCAGGAGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAESLLVF*SARRKC
Trigger: ACACTTCCTCCTGGCTGATCAAAAGACCAGGAGAGA...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATCGGGCTGCCAGCTTGTaGATCATAGTCCCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNRAASL*IIVPVV
Trigger: GACAACTGGGACTATGATTCACAAGCTGGCAGCCCG...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCATAAGAGTCGCACGTTaGCCAGTTTGCTTAAAAACT +
Preference number: 4 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPIRVAR*PVCLKT
Trigger: AGTTTTTAAGCAAACTGGGCAACGTGCGACTCTTAT...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGTCTGGTTGCTTTTCCTaGCAACTCACGTATGGTAGA +
Preference number: 4 (lower is better)
Translates to: ASEQWWMPLISALGMQRQSGCFS*QLTYGR
Trigger: TCTACCATACGTGAGTTGGCAGGAAAAGCAACCAGA...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATCGAAATCCTCCCCTTTaGTTTGGCTCCAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNRNPPL*FGSSRF
Trigger: GAACCGGCTGGAGCCAAAGCAAAGGGGAGGATTTCG...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTACCTAGAGATCGAATaGCCTTTTCTTCAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPYLEIE*PFLQEK
Trigger: CTTCTCTTGAAGAAAAGGGCATTCGATCTCTAGGTA...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAAAGCACGGTATTTaGCAAGAGATGGTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAEAKHGI*QEMVGW
Trigger: CCAACCCACCATCTCTTGCCAAATACCGTGCTTTGC...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACAACACTCTGGTGTGCTaGATATTTCTTTTCACAAGC +
Preference number: 4 (lower is better)
Translates to: TWNAEAGRSLECETSLLYNTLVC*IFLFTS
Trigger: GCTTGTGAAAAGAAATATCCAGCACACCAGAGTGTT...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAAACACTGAGAGGCAGGTaGAAATTAAGAGACTGCGCT +
Preference number: 4 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLETLRGR*KLRDCA
Trigger: AGCGCAGTCTCTTAATTTCCACCTGCCTCTCAGTGT...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGGTCCTTCTGTCTTTCTaGCCCATTCTCTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: ASEQWWMPLISALGMQRQVLLSF*PILLLS
Trigger: AGAAAGCAAGAGAATGGGCCAGAAAGACAGAAGGAC...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGGTGAAGAGAAGTGTTaGCTTGGGGCTGAATTCCCA +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAEGEEKC*LGAEFP
Trigger: TGGGAATTCAGCCCCAAGCCAACACTTCTCTTCACC...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCATGCTGTTCACTGGCTTaGGGAGCGTGTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HRNMRKASEQWWMPLISACCSLA*GACSPG
Trigger: ACCTGGAGAACACGCTCCTCAAGCCAGTGAACAGCA...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACAGGTTAACTTCCTCTaGGGCTGGATGCCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: HRNMRKASEQWWMPLISAQVNFL*GWMPVR
Trigger: CCTCACAGGCATCCAGCCTCAGAGGAAGTTAACCTG...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACTGGAATTCCTTTATTTaGTCTCCAGGAGTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: TWNAEAGRSLECETSLLYWNSFI*SPGVQN
Trigger: ATTTTGCACTCCTGGAGATCAAATAAAGGAATTCCA...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTACAGTGCCAGGGATaGAGAAGATGGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: HRNMRKASEQWWMPLISALQCQG*RRWPQD
Trigger: GTCCTGTGGCCATCTTCTTCATCCCTGGCACTGTAG...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACCTGCTTGGCTTGTGTaGATGTCACACCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: HRNMRKASEQWWMPLISAPAWLV*MSHPPW
Trigger: CCATGGAGGGTGTGACATTCACACAAGCCAAGCAGG...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGAAGAAAACTCAGCTGTaGCTGCAGGAGCAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAEKKTQL*LQEQRK
Trigger: TTTCCTCTGCTCCTGCAGTCACAGCTGAGTTTTCTT...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGAAGGAGAATTCCCTCTaGTTTACTCACGTCATTCAG +
Preference number: 4 (lower is better)
Translates to: ASEQWWMPLISALGMQRQKENSL*FTHVIQ
Trigger: CTGAATGACGTGAGTAAAGCAGAGGGAATTCTCCTT...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAAATCTCTCCCACAATGTaGTTCCCATTGATGAATGCC +
Preference number: 4 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLEISPTM*FPLMNA
Trigger: GGCATTCATCAATGGGAAGCACATTGTGGGAGAGAT...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCAGTCCTGTTGCCAGGGTaGTACAGTGCCAGGGATGAA +
Preference number: 4 (lower is better)
Translates to: HRNMRKASEQWWMPLISAVLLPG*YSARDE
Trigger: TTCATCCCTGGCACTGTAGCACCCTGGCAACAGGAC...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCAAACGCCTTGTCCTGTTaGCAGGGTGCTACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: HRNMRKASEQWWMPLISANALSC*QGATVP
Trigger: TGGCACTGTAGCACCCTGGCAACAGGACAAGGCGTT...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGGTTGAAAGACAAGCATaGAGGCCTCGCTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: ASEQWWMPLISALGMQRQVERQA*RPRFLF
Trigger: AAAAAGAAAGCGAGGCCTGCATGCTTGTCTTTCAAC...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGAGGGCTCTGATGCACTaGGGCACTTTGCAAATTAAG +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAERALMH*GTLQIK
Trigger: CTTAATTTGCAAAGTGCCGCAGTGCATCAGAGCCCT...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGATGTCACACCCTCCATaGAACTGGAACAGTCAAGAC +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAEMSHPP*NWNSQD
Trigger: GTCTTGACTGTTCCAGTTCCATGGAGGGTGTGACAT...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCAAGAGGGGAAGGAAGATaGGTGCCATCAGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: HRNMRKASEQWWMPLISARGEGR*VPSGRG
Trigger: TCCTCTCCCTGATGGCACCCATCTTCCTTCCCCTCT...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGGCACATTCCTCATCTaGGGAAGTCTCAATACTTGT +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAEGTFLI*GSLNTC
Trigger: ACAAGTATTGAGACTTCCTCAGATGAGGAATGTGCC...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATAAACTCAGCTGTGACTaGAGGAGCAGAGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNKLSCD*RSRGNQ
Trigger: CTGGTTTCCTCTGCTCCTGCAGTCACAGCTGAGTTT...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCAAGGACTGCAAAAAGGTaGCTGGTGAAGAACGCCCAT +
Preference number: 4 (lower is better)
Translates to: HRNMRKASEQWWMPLISARTAKR*LVKNAH
Trigger: ATGGGCGTTCTTCACCAGTCACCTTTTTGCAGTCCT...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGGAGAAGCTTTGCTCTaGTCCAATTTCCTTTATACG +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAEGEALL*SNFLYT
Trigger: CGTATAAAGGAAATTGGAGCAGAGCAAAGCTTCTCC...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCCAGGGAGAAGCTTTaGTCTGCTCCAATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNAREKL*SAPISF
Trigger: AAAGGAAATTGGAGCAGAGCAAAGCTTCTCCCTGGC...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGGCTATAAATGCTGCTaGTTCATCTGTATCGGTTTC +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAEGYKCC*FICIGF
Trigger: GAAACCGATACAGATGAAGCAGCAGCATTTATAGCC...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGTCTGGCCCATTCTCTTaGTTTCTTTATGTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: ASEQWWMPLISALGMQRQSGPFS*FLYVLK
Trigger: TTTGAGAACATAAAGAAAGCAAGAGAATGGGCCAGA...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGGCTGTAGCACTCCATaGCCATCAGAGAGTTTATTG +
Preference number: 4 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNGCSTP*PSESLL
Trigger: CAATAAACTCTCTGATGGCCATGGAGTGCTACAGCC...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATTTCCAACACTTACAGTaGAAACATCCGGAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNFQHLQ*KHPECP
Trigger: AGGACACTCCGGATGTTTTCACTGTAAGTGTTGGAA...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGATTCTTTCTCTTGGATaGATGCTTGCAGAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAEILSLG*MLAELL
Trigger: AAGCAACTCTGCAAGCATTCATCCAAGAGAAAGAAT...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATCATCGTTCTTTTGGATaGAGTTCAGATGACACCGAC +
Preference number: 4 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNHRSFG*SSDDTD
Trigger: GTCGGTGTCATCTGAACTCCATCCAAAAGAACGATG...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATTTGATGTCTGGTAACTaGAAATCTCCAGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNLMSGN*KSPASG
Trigger: TCCAGAGGCTGGAGATTTCCAGTTACCAGACATCAA...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCATCACGCAAACCAATGTaGAGAGAAAATCCACCGCTG +
Preference number: 4 (lower is better)
Translates to: HRNMRKASEQWWMPLISASRKPM*RENPPL
Trigger: CAGCGGTGGATTTTCTCTCCACATTGGTTTGCGTGA...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACCAGTAGTTGCTTTGTaGCTGACTCCCAGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: HRNMRKASEQWWMPLISAPVVAL*LTPSLY
Trigger: GTAAAGACTGGGAGTCAGCCACAAAGCAACTACTGG...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCAGGCAGATATTCTGATTaGACTTCAGACCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: HRNMRKASEQWWMPLISAGRYSD*TSDLLL
Trigger: AAGGAGCAGGTCTGAAGTGCAATCAGAATATCTGCC...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGATCATTGGCTATAAATaGTGCTGCTTCATCTGTATC +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAEIIGYK*CCFICI
Trigger: GATACAGATGAAGCAGCAGCATTTATAGCCAATGAT...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAACTGCAAGATATCTACTaGTTGTTCACTTCGATTATT +
Preference number: 4 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLELQDIY*LFTSII
Trigger: AATAATCGAAGTGAACAACCAGTAGATATCTTGCAG...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGTCTTTATCAGAGACTTaGCAACCATTCCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAESLSET*QPFLLV
Trigger: AACAAGAAGGAATGGTTGCCAAGTCTCTGATAAAGA...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR TCA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGATGCACTTAGGATATaGAAACAGTTCCTTGTAACC +
Preference number: 4 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNDALRI*KQFLVT
Trigger: GGTTACAAGGAACTGTTTTCATATCCTAAGTGCATC...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGTCACTTCGATTATTCTaGAACACTTCTTTTCTAACC +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAESLRLF*NTSFLT
Trigger: GGTTAGAAAAGAAGTGTTGCAGAATAATCGAAGTGA...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATATAATGTTGACTTTCTaGTCTTCACCCAGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNIMLTF*SSPSKD
Trigger: GTCTTTGCTGGGTGAAGAGCAGAAAGTCAACATTAT...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCATTTCTTTTCACAAGCTaGAGTGTCAGACTCTCACTC +
Preference number: 4 (lower is better)
Translates to: HRNMRKASEQWWMPLISAFLFTS*SVRLSL
Trigger: GAGTGAGAGTCTGACACTGCAGCTTGTGAAAAGAAA...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATTCTTGGATGAATGCTTaGAGAGTTGCTTGTGTACAA +
Preference number: 4 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNSWMNA*RVACVQ
Trigger: TTGTACACAAGCAACTCTGCAAGCATTCATCCAAGA...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGTCAGAGAGTTTATTGTaGTTTAGTCTCGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAESESLL*FSLEES
Trigger: TGATTCTTCGAGACTAAAGCACAATAAACTCTCTGA...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGCAAAATTCTTTCTCTTaGATGAATGCTTGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAEQNSFS*MNACRV
Trigger: AACTCTGCAAGCATTCATCCAAGAGAAAGAATTTTG...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CCA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGCTTCTTGTTCCAACTTaGTATAAAGAAACTGCAGTA +
Preference number: 4 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAELLVPT*YKETAV
Trigger: TACTGCAGTTTCTTTATACCAAGTTGGAACAAGAAG...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATAATTTCAACATTCTCTaGAGAAACCTCAGTGACTTC +
Preference number: 4 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNNFNIL*RNLSDF
Trigger: GAAGTCACTGAGGTTTCTGCAGAGAATGTTGAAATT...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACAGCTTTACAGTCTGTaGTCTTTTGTCTCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: HRNMRKASEQWWMPLISAQLYSL*SFVSVH
Trigger: ATGAACTGAGACAAAAGAGCACAGACTGTAAAGCTG...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR GCA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCAGTGAACACTCTGGTGTaGTGGATATTTCTTTTCACA +
Preference number: 4 (lower is better)
Translates to: HRNMRKASEQWWMPLISAVNTLV*WIFLFT
Trigger: TGTGAAAAGAAATATCCAGCACACCAGAGTGTTCAC...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 90 bp CGAAATCCTCCCCTTTGCTTTGGCTCCAGCCGGTTCCCATGCAGCTaGTGCTCCACAGCTTTCAGTTGTGGGCGGACACTGAGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: RNPPLCFGSSRFPCS*CSTAFSCGRTLRGR
Trigger: CCTGCCTCTCAGTGTCCGCCCACAACTGAAAGCTGTGGAGCAGCAGCTGCATGGGAACCGGCTGGAGCCAAAGCAAAGGGGAGGATTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 90 bp TCAGGGAGAGGAAGAGGGGGAGGAGGGTGGGTACCACCAAGGGGATaGGGAGGAAGAGAAGAAGGGATGTCGCAGAGAGGAGACAGGAAG +
Preference number: 5 (lower is better)
Translates to: SGRGRGGGGWVPPRG*GGREEGMSQRGDRK
Trigger: CTTCCTGTCTCCTCTCTGCGACATCCCTTCTTCTCTTCCTCCCCATCCCCTTGGTGGTACCCACCCTCCTCCCCCTCTTCCTCTCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 90 bp CCCAGAGCTTCTGTCCAGATCACCTCCAGCAAATCGCTCACCTCCTaGCTCAGGGCGCCTGAACTAATGACCTCCTCCAAAAGCAACGCC +
Preference number: 5 (lower is better)
Translates to: PRASVQITSSKSLTS*LRAPELMTSSKSNA
Trigger: GGCGTTGCTTTTGGAGGAGGTCATTAGTTCAGGCGCCCTGAGCCAGGAGGTGAGCGATTTGCTGGAGGTGATCTGGACAGAAGCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 90 bp TTCAGGCTCATGCTGTTCACTGGCTTGAGGAGCGTGTTCTCCAGGTaGCCCAGAGCTTCTGTCCAGATCACCTCCAGCAAATCGCTCACC +
Preference number: 5 (lower is better)
Translates to: FRLMLFTGLRSVFSR*PRASVQITSSKSLT
Trigger: GGTGAGCGATTTGCTGGAGGTGATCTGGACAGAAGCTCTGGGCCACCTGGAGAACACGCTCCTCAAGCCAGTGAACAGCATGAGCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACGTCCGCAAGCTCCGGTaGAAAGACAAGCATGCAGGC +
Preference number: 5 (lower is better)
Translates to: TWNAEAGRSLECETSLLYVRKLR*KDKHAG
Trigger: GCCTGCATGCTTGTCTTTCAACCGGAGCTTGCGGAC...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 90 bp CCAGATCACCTCCAGCAAATCGCTCACCTCCTGGCTCAGGGCGCCTaGACTAATGACCTCCTCCAAAAGCAACGCCTGCAGTTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: PDHLQQIAHLLAQGA*TNDLLQKQRLQFLR
Trigger: TCTGAGAAACTGCAGGCGTTGCTTTTGGAGGAGGTCATTAGTTCAGGCGCCCTGAGCCAGGAGGTGAGCGATTTGCTGGAGGTGATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 90 bp AGTTTTCGAAATCCTCCCCTTTGCTTTGGCTCCAGCCGGTTCCCATaGAGCTGCTGCTCCACAGCTTTCAGTTGTGGGCGGACACTGAGA +
Preference number: 5 (lower is better)
Translates to: SFRNPPLCFGSSRFP*SCCSTAFSCGRTLR
Trigger: TCTCAGTGTCCGCCCACAACTGAAAGCTGTGGAGCAGCAGCTGCATGGGAACCGGCTGGAGCCAAAGCAAAGGGGAGGATTTCGAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCGGAGGGCTCAGCCCTTaGCTCCTCTACTTCGGTATT +
Preference number: 5 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPGGLSP*LLYFGI
Trigger: AATACCGAAGTAGAGGAGCAAAGGGCTGAGCCCTCC...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCCCCATCTCAGGGGCTTaGGGAGAGAAGCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPPISGA*GEKLML
Trigger: CAACATCAGCTTCTCTCCCAAAGCCCCTGAGATGGG...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 90 bp CCTCTGCTTTACTCACGTCATTCAGGCTCATGCTGTTCACTGGCTTaGGGAGCGTGTTCTCCAGGTGGCCCAGAGCTTCTGTCCAGATCA +
Preference number: 5 (lower is better)
Translates to: PLLYSRHSGSCCSLA*GACSPGGPELLSRS
Trigger: TGATCTGGACAGAAGCTCTGGGCCACCTGGAGAACACGCTCCTCAAGCCAGTGAACAGCATGAGCCTGAATGACGTGAGTAAAGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 90 bp TGCTGCTCCACAGCTTTCAGTTGTGGGCGGACACTGAGAGGCAGGTaGAAATTAAGAGACTGCGCTGTTGCAGGTGACTGTGCTACTGCA +
Preference number: 5 (lower is better)
Translates to: CCSTAFSCGRTLRGR*KLRDCAVAGDCATA
Trigger: TGCAGTAGCACAGTCACCTGCAACAGCGCAGTCTCTTAATTTCCACCTGCCTCTCAGTGTCCGCCCACAACTGAAAGCTGTGGAGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGGTAAGCACCATGGCCTaGGCTGACAGCCTCTCGGTA +
Preference number: 5 (lower is better)
Translates to: ASEQWWMPLISALGMQRQVSTMA*ADSLSV
Trigger: TACCGAGAGGCTGTCAGCCAAGGCCATGGTGCTTAC...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 90 bp ACAAAGGTCCTCTTTTTGAGCCAACAGCCTCAGGTTAACTTCCTCTaGGGCTGGATGCCTGTGAGGCAGCAAGCGGTAGAACTCGGCCAT +
Preference number: 5 (lower is better)
Translates to: TKVLFLSQQPQVNFL*GWMPVRQQAVELGH
Trigger: ATGGCCGAGTTCTACCGCTTGCTGCCTCACAGGCATCCAGCCTCAGAGGAAGTTAACCTGAGGCTGTTGGCTCAAAAAGAGGACCTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 90 bp TGGCTCAGGGCGCCTGAACTAATGACCTCCTCCAAAAGCAACGCCTaGAGTTTCTCAGACGCTAACTGTGTTGCTTCGGCCGTAAAGTGT +
Preference number: 5 (lower is better)
Translates to: WLRAPELMTSSKSNA*SFSDANCVASAVKC
Trigger: ACACTTTACGGCCGAAGCAACACAGTTAGCGTCTGAGAAACTGCAGGCGTTGCTTTTGGAGGAGGTCATTAGTTCAGGCGCCCTGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 90 bp ACACTTCTTTGCCATGAGCAGTTTTCGAAATCCTCCCCTTTGCTTTaGCTCCAGCCGGTTCCCATGCAGCTGCTGCTCCACAGCTTTCAG +
Preference number: 5 (lower is better)
Translates to: TLLCHEQFSKSSPLL*LQPVPMQLLLHSFQ
Trigger: CTGAAAGCTGTGGAGCAGCAGCTGCATGGGAACCGGCTGGAGCCAAAGCAAAGGGGAGGATTTCGAAAACTGCTCATGGCAAAGAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 90 bp GTGTTTTCCTTCTCTGGGGTGTTGTCTGAAGGCAGATATTCTGATTaGACTTCAGACCTGCTCCTTTCAGCTGGTGGTGCTGCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: VFSFSGVLSEGRYSD*TSDLLLSAGGAAGA
Trigger: GGCTCCAGCAGCACCACCAGCTGAAAGGAGCAGGTCTGAAGTGCAATCAGAATATCTGCCTTCAGACAACACCCCAGAGAAGGAAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 90 bp TGTATCCTGAAGGTTCTCATTCAACGCCTTGTCCTGTTGCCAGGGTaGTACAGTGCCAGGGATGAAGAAGATGGCCACAGGACTCTGGAT +
Preference number: 5 (lower is better)
Translates to: CILKVLIQRLVLLPG*YSARDEEDGHRTLD
Trigger: ATCCAGAGTCCTGTGGCCATCTTCTTCATCCCTGGCACTGTAGCACCCTGGCAACAGGACAAGGCGTTGAATGAGAACCTTCAGGATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGCGCAAAGCACGGTATTaGGCAAGAGATGGTGGGTTG +
Preference number: 5 (lower is better)
Translates to: ASEQWWMPLISALGMQRQRKARY*ARDGGL
Trigger: CAACCCACCATCTCTTGCCAAATACCGTGCTTTGCG...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGTTCTCATTCAACGCCTaGTCCTGTTGCCAGGGTGCT +
Preference number: 5 (lower is better)
Translates to: ASEQWWMPLISALGMQRQFSFNA*SCCQGA
Trigger: AGCACCCTGGCAACAGGACAAGGCGTTGAATGAGAA...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAAGGCAACCTGCTTGGCTaGTGTGAATGTCACACCCTC +
Preference number: 5 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLEGNLLG*CECHTL
Trigger: GAGGGTGTGACATTCACACAAGCCAAGCAGGTTGCC...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 90 bp GCTGGGTTGGCAATCTGCACATCGTTCTTTTGGATGGAGTTCAGATaGCACCGACTCAGGACGTCAGCACTGTCTACGATGACATGTGTG +
Preference number: 5 (lower is better)
Translates to: AGLAICTSFFWMEFR*HRLRTSALSTMTCV
Trigger: CACACATGTCATCGTAGACAGTGCTGACGTCCTGAGTCGGTGTCATCTGAACTCCATCCAAAAGAACGATGTGCAGATTGCCAACCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 90 bp CAAGCTGCAGTGTCAGACTCTCACTCTGGAGGTGCCCATCAGATATaGGGAGAATGTTCCGGAACCCTTCTGAAGGGTACAGGAGACTTA +
Preference number: 5 (lower is better)
Translates to: QAAVSDSHSGGAHQI*GECSGTLLKGTGDL
Trigger: TAAGTCTCCTGTACCCTTCAGAAGGGTTCCGGAACATTCTCCTCATATCTGATGGGCACCTCCAGAGTGAGAGTCTGACACTGCAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 90 bp ACTTTCTGCTCTTCACCCAGCAAAGACAGAGCATACAGGGCAACCTaGTTGGCTTGTGTGAATGTCACACCCTCCATGGAACTGGAACAG +
Preference number: 5 (lower is better)
Translates to: TFCSSPSKDRAYRAT*LACVNVTPSMELEQ
Trigger: CTGTTCCAGTTCCATGGAGGGTGTGACATTCACACAAGCCAAGCAGGTTGCCCTGTATGCTCTGTCTTTGCTGGGTGAAGAGCAGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 90 bp TCAGTCTGTAGAGCAAAGAGTGAAGCCCACGGCACAGGACTCTCCTaGTCTTCATCACAGAAGGCACATTCCTCATCTGAGGAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: SVCRAKSEAHGTGLS*SSSQKAHSSSEEVS
Trigger: TGAGACTTCCTCAGATGAGGAATGTGCCTTCTGTGATGAAGACCAGGAGAGTCCTGTGCCGTGGGCTTCACTCTTTGCTCTACAGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACCTGCACATCGTTCTTTaGGATGGAGTTCAGATGACA +
Preference number: 5 (lower is better)
Translates to: TWNAEAGRSLECETSLLYLHIVL*DGVQMT
Trigger: TGTCATCTGAACTCCATCCAAAAGAACGATGTGCAG...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCACAGTCTGTGCTCTTTaGTCTCAGTTCATGTGTGTC +
Preference number: 5 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPTVCAL*SQFMCV
Trigger: GACACACATGAACTGAGACAAAAGAGCACAGACTGT...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTTAAGATGTGACGATTaGCTGTGGAACCAACAGCAC +
Preference number: 5 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPLRCDD*LWNQQH
Trigger: GTGCTGTTGGTTCCACAGCAAATCGTCACATCTTAA...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAAACCAGGAGTCGATCATaGTGGAACAAAGAGGGCACC +
Preference number: 5 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLETRSRS*WNKEGT
Trigger: GGTGCCCTCTTTGTTCCACAATGATCGACTCCTGGT...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAATATGGAGGCCTCTGGTaGCTTTTCCTGCCAACTCAC +
Preference number: 5 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLEYGGLW*LFLPTH
Trigger: GTGAGTTGGCAGGAAAAGCAACCAGAGGCCTCCATA...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 90 bp GCACAGGTGAACACTCTGGTGTGCTGGATATTTCTTTTCACAAGCTaGAGTGTCAGACTCTCACTCTGGAGGTGCCCATCAGATATGAGG +
Preference number: 5 (lower is better)
Translates to: AQVNTLVCWIFLFTS*SVRLSLWRCPSDMR
Trigger: CCTCATATCTGATGGGCACCTCCAGAGTGAGAGTCTGACACTGCAGCTTGTGAAAAGAAATATCCAGCACACCAGAGTGTTCACCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 90 bp TTTTCAACCCACATTCTTGGGAGGTATGCATCACGCAAACCAATGTaGAGAGAAAATCCACCGCTGTCCAAGGAGCTGCCTTCCACAGTG +
Preference number: 5 (lower is better)
Translates to: FSTHILGRYASRKPM*RENPPLSKELPSTV
Trigger: CACTGTGGAAGGCAGCTCCTTGGACAGCGGTGGATTTTCTCTCCACATTGGTTTGCGTGATGCATACCTCCCAAGAATGTGGGTTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCTGTCTTGAATGGATGAATGCTGGGTaGGCAATCTGCACATCGTTC +
Preference number: 5 (lower is better)
Translates to: LQSEFQDGQDYTEKPCLEWMNAG*AICTSF
Trigger: GAACGATGTGCAGATTGCCAACCCAGCATTCATCCA...TTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACAACGCCTTGTCCTGTaGCCAGGGTGCTACAGTGCC +
Preference number: 5 (lower is better)
Translates to: HRNMRKASEQWWMPLISAQRLVL*PGCYSA
Trigger: GGCACTGTAGCACCCTGGCAACAGGACAAGGCGTTG...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGTTTCAACCCACATTCTaGGGAGGTATGCATCACGCA +
Preference number: 5 (lower is better)
Translates to: ASEQWWMPLISALGMQRQFQPTF*GGMHHA
Trigger: TGCGTGATGCATACCTCCCAAGAATGTGGGTTGAAA...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACCCAAATTGCATAATGTaGACTTTCTGCTCTTCACCC +
Preference number: 5 (lower is better)
Translates to: TWNAEAGRSLECETSLLYPNCIM*TFCSSP
Trigger: GGGTGAAGAGCAGAAAGTCAACATTATGCAATTTGG...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 90 bp AGAACTAGAGCTGCAGGCAGAAAGGTAAGAAAACTCAGCTGTGACTaGAGGAGCAGAGGAAACCAGGGAATCAGGCACATTTCGACACTT +
Preference number: 5 (lower is better)
Translates to: RTRAAGRKVRKLSCD*RSRGNQGIRHISTL
Trigger: AAGTGTCGAAATGTGCCTGATTCCCTGGTTTCCTCTGCTCCTGCAGTCACAGCTGAGTTTTCTTACCTTTCTGCCTGCAGCTCTAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CAGCCTGCTCTACAGAGTGAGTTCCAGGATGGCCAGGACTACACAGAGAAACCCGTAACCTGTGCCAAATaGCATAATGTTGACTTTCTG +
Preference number: 5 (lower is better)
Translates to: QPALQSEFQDGQDYTEKPVTCAK*HNVDFL
Trigger: CAGAAAGTCAACATTATGCAATTTGGCACAGGTTAC...GGGTTTCTCTGTGTAGTCCTGGCCATCCTGGAACTCACTCTGTAGAGCAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACGCAAAATTCTTTCTCTaGGATGAATGCTTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: TWNAEAGRSLECETSLLYAKFFL*DECLQS
Trigger: ACTCTGCAAGCATTCATCCAAGAGAAAGAATTTTGC...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCAATCCTCCCCTTTGCTTaGGCTCCAGCCGGTTCCCAT +
Preference number: 5 (lower is better)
Translates to: HRNMRKASEQWWMPLISAILPFA*APAGSH
Trigger: ATGGGAACCGGCTGGAGCCAAAGCAAAGGGGAGGAT...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATTCGAAATCCTCCCCTTaGCTTTGGCTCCAGCCGGTT +
Preference number: 5 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNSKSSP*LWLQPV
Trigger: AACCGGCTGGAGCCAAAGCAAAGGGGAGGATTTCGA...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGGAGAAGCTGATGTTGTaGGGGCCTTGGGAAAATTTA +
Preference number: 5 (lower is better)
Translates to: ASEQWWMPLISALGMQRQEKLML*GPWENL
Trigger: TAAATTTTCCCAAGGCCCCAACAACATCAGCTTCTC...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 90 bp CATATCTCTAGAGCACAAATCCTTAAAGCCCAGGAGAGGTGGCTCTaGGTCATGGATGTTGGTATCTCCGACAAGTTTATGGCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: HISRAQILKAQERWL*VMDVGISDKFMAVA
Trigger: AGCCACAGCCATAAACTTGTCGGAGATACCAACATCCATGACTCAGAGCCACCTCTCCTGGGCTTTAAGGATTTGTGCTCTAGAGATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 90 bp TCTTCCCTTAATGTGAACACTGTCAAGAGGAACAGGATTCGCAGATaGATCCTGAAGGCCGGCTTTGATGTTTGTGAAGGGCTTGATGTC +
Preference number: 5 (lower is better)
Translates to: SSLNVNTVKRNRIRR*ILKAGFDVCEGLDV
Trigger: GACATCAAGCCCTTCACAAACATCAAAGCCGGCCTTCAGGATGCATCTGCGAATCCTGTTCCTCTTGACAGTGTTCACATTAAGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 90 bp ATAGCGGAGAACTTTCCAGAAGTCTGTGTTCCCCATGGAAGGTGCTaGAGACATAATGAACTCTGTGGCCATTTTACTGTCCGTGATGCA +
Preference number: 5 (lower is better)
Translates to: IAENFPEVCVPHGRC*RHNELCGHFTVRDA
Trigger: TGCATCACGGACAGTAAAATGGCCACAGAGTTCATTATGTCTGCAGCACCTTCCATGGGGAACACAGACTTCTGGAAAGTTCTCCGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 90 bp ACGGAAACGGGCTGTAGCACTCCATGGCCATCAGAGAGTTTATTGTaGTTTAGTCTCGAAGAATCAATCTCTGTCTGTGATATGGAGGCC +
Preference number: 5 (lower is better)
Translates to: TETGCSTPWPSESLL*FSLEESISVCDMEA
Trigger: GGCCTCCATATCACAGACAGAGATTGATTCTTCGAGACTAAAGCACAATAAACTCTCTGATGGCCATGGAGTGCTACAGCCCGTTTCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 90 bp TGCTGGATATTTCTTTTCACAAGCTGCAGTGTCAGACTCTCACTCTaGAGGTGCCCATCAGATATGAGGAGAATGTTCCGGAACCCTTCT +
Preference number: 5 (lower is better)
Translates to: CWIFLFTSCSVRLSL*RCPSDMRRMFRNPS
Trigger: AGAAGGGTTCCGGAACATTCTCCTCATATCTGATGGGCACCTCCAGAGTGAGAGTCTGACACTGCAGCTTGTGAAAAGAAATATCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCAATGCTGTTCACTGGCTaGAGGAGCGTGTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: HRNMRKASEQWWMPLISAMLFTG*RSVFSR
Trigger: CCTGGAGAACACGCTCCTCAAGCCAGTGAACAGCAT...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp GCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAGTGCTTGCAGAGTTGCTaGTGTACAATGAGGAATGAA +
Preference number: 5 (lower is better)
Translates to: ASEQWWMPLISALGMQRQCLQSC*CTMRNE
Trigger: TTCATTCCTCATTGTACACAAGCAACTCTGCAAGCA...CTGCCTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp ACTTGGAATGCAGAGGCAGGCAGATCCCTTGAGTGTGAGACCAGCCTGCTCTACCTTGTTAAAAGATCATaGGCTATAAATGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: TWNAEAGRSLECETSLLYLVKRS*AINAAA
Trigger: AGCAGCAGCATTTATAGCCAATGATCTTTTAACAAG...GTAGAGCAGGCTGGTCTCACACTCAAGGGATCTGCCTGCCTCTGCATTCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 90 bp TGCTCTGCTCCAATTTCCTTTATACGAATTGTCTCCACTGTATCCTaGAGGTTCTCATTCAACGCCTTGTCCTGTTGCCAGGGTGCTACA +
Preference number: 5 (lower is better)
Translates to: CSAPISFIRIVSTVS*RFSFNALSCCQGAT
Trigger: TGTAGCACCCTGGCAACAGGACAAGGCGTTGAATGAGAACCTTCAGGATACAGTGGAGACAATTCGTATAAAGGAAATTGGAGCAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 90 bp CTTCTTGTTCCAACTTGGTATAAAGAAACTGCAGTACGAGCAAAGTaGCAATCAGATCCAGGAGACGCTCTCGCCCTTTTGTACCTAGAG +
Preference number: 5 (lower is better)
Translates to: LLVPTWYKETAVRAK*QSDPGDALALLYLE
Trigger: CTCTAGGTACAAAAGGGCGAGAGCGTCTCCTGGATCTGATTGCCACTTTGCTCGTACTGCAGTTTCTTTATACCAAGTTGGAACAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGGAGAGAAGCTGATGTaGTTGGGGCCTTGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNGEKLM*LGPWEN
Trigger: ATTTTCCCAAGGCCCCAACAACATCAGCTTCTCTCC...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp AAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGCAGAGGCAAGAGATGGTGGGTaGGGTTTGGATAAATTAGTT +
Preference number: 5 (lower is better)
Translates to: KGIRAVVDAFNLSTWNAEARDGG*GLDKLV
Trigger: AACTAATTTATCCAAACCCAACCCACCATCTCTTGC...CTCTGCATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCAAGCCAGGGAGAAGCTTaGCTCTGCTCCAATTTCCTT +
Preference number: 5 (lower is better)
Translates to: HRNMRKASEQWWMPLISASQGEA*LCSNFL
Trigger: AAGGAAATTGGAGCAGAGCAAAGCTTCTCCCTGGCT...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 90 bp AGTCTCGAAGAATCAATCTCTGTCTGTGATATGGAGGCCTCTGGTTaGTTTTCCTGCCAACTCACGTATGGTAGAAAGTCAACATCTTCT +
Preference number: 5 (lower is better)
Translates to: SLEESISVCDMEASG*FSCQLTYGRKSTSS
Trigger: AGAAGATGTTGACTTTCTACCATACGTGAGTTGGCAGGAAAAGCAACCAGAGGCCTCCATATCACAGACAGAGATTGATTCTTCGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCAACAAAGGTCCTCTTTTaGAGCCAACAGCCTCAGGTT +
Preference number: 5 (lower is better)
Translates to: HRNMRKASEQWWMPLISATKVLF*SQQPQV
Trigger: AACCTGAGGCTGTTGGCTCAAAAAGAGGACCTTTGT...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCAGATGTTGTTGGGGCCTaGGGAAAATTTACCTGGATC +
Preference number: 5 (lower is better)
Translates to: HRNMRKASEQWWMPLISADVVGA*GKFTWI
Trigger: GATCCAGGTAAATTTTCCCAAGGCCCCAACAACATC...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 90 bp GATGTTGGTATCTCCGACAAGTTTATGGCTGTGGCTAAGCTTAGGTaGACCCAACTTAGGTGGTATGAATCCTATAGGAGAAAGAGAAAA +
Preference number: 5 (lower is better)
Translates to: DVGISDKFMAVAKLR*TQLRWYESYRRKRK
Trigger: TTTTCTCTTTCTCCTATAGGATTCATACCACCTAAGTTGGGTCCACCTAAGCTTAGCCACAGCCATAAACTTGTCGGAGATACCAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp TATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCACTTGGAATGGCAACCATTCCTTCTaGTTCCAACTTGGTATAAAG +
Preference number: 5 (lower is better)
Translates to: YEKGIRAVVDAFNLSTWNGNHSF*FQLGIK
Trigger: CTTTATACCAAGTTGGAACAAGAAGGAATGGTTGCC...ATTCCAAGTGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCAGATGGTGGGTTGGGTTaGGATAAATTAGTTTCACAA +
Preference number: 5 (lower is better)
Translates to: HRNMRKASEQWWMPLISADGGLG*DKLVSQ
Trigger: TTGTGAAACTAATTTATCCAAACCCAACCCACCATC...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCAATGCACTGCGGCACTTaGCAAATTAAGAAAATAGCT +
Preference number: 5 (lower is better)
Translates to: HRNMRKASEQWWMPLISAMHCGT*QIKKIA
Trigger: AGCTATTTTCTTAATTTGCAAAGTGCCGCAGTGCAT...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS-3UTR CAA 90 bp CATAGAAATATGAGAAAGGCATCAGAGCAGTGGTGGATGCCTTTAATCTCAGCAATGGAATTCCTTTATTaGATCTCCAGGAGTGCAAAA +
Preference number: 5 (lower is better)
Translates to: HRNMRKASEQWWMPLISAMEFLY*ISRSAK
Trigger: TTTTGCACTCCTGGAGATCAAATAAAGGAATTCCAT...TGCTGAGATTAAAGGCATCCACCACTGCTCTGATGCCTTTCTCATATTTCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 90 bp CTAAATATCTGCAAGATATCTACTGGTTGTTCACTTCGATTATTCTaGAACACTTCTTTTCTAACCCTGGAAAATTCTTCAGTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LNICKISTGCSLRLF*NTSFLTLENSSVFW
Trigger: CCAGAACACTGAAGAATTTTCCAGGGTTAGAAAAGAAGTGTTGCAGAATAATCGAAGTGAACAACCAGTAGATATCTTGCAGATATTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp TCATTGTGGAACAAAGAGGGCACCCATGCCGGGGCCTaGAGAGGCTCGGGGGCATCTCTGCTAAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SLWNKEGTHAGA*RGSGASLLSCC
Trigger: GCAGCAGCTTAGCAGAGATGCCCCCGAGCCTCTGCAGGCCCCGGCATGGGTGCCCTCTTTGTTCCACAATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp CGGAGTGTCCTGGTCCATCAAGTAAGCACCATGGCCTaGGCTGACAGCCTCTCGGTACTCCTGCCGGGCCTC +
Preference number: 6 (lower is better)
Translates to: RSVLVHQVSTMA*ADSLSVLLPGL
Trigger: GAGGCCCGGCAGGAGTACCGAGAGGCTGTCAGCCAAGGCCATGGTGCTTACTTGATGGACCAGGACACTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp CCCCTTTGCTTTGGCTCCAGCCGGTTCCCATGCAGCTaGTGCTCCACAGCTTTCAGTTGTGGGCGGACACTG +
Preference number: 6 (lower is better)
Translates to: PLCFGSSRFPCS*CSTAFSCGRTL
Trigger: CAGTGTCCGCCCACAACTGAAAGCTGTGGAGCAGCAGCTGCATGGGAACCGGCTGGAGCCAAAGCAAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp TGTCCTGGTCCATCAAGTAAGCACCATGGCCTTGGCTaGCAGCCTCTCGGTACTCCTGCCGGGCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: CPGPSSKHHGLG*QPLGTPAGPLP
Trigger: AGGAAGAGGCCCGGCAGGAGTACCGAGAGGCTGTCAGCCAAGGCCATGGTGCTTACTTGATGGACCAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp AGAAGAGGGAGGAATAAGGGTGCCACCAGGGATAGGTaGAGGGGGAGGAATATGGGTGCCACCAGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: RRGRNKGATRDR*RGRNMGATRER
Trigger: CCTCTCCCTGGTGGCACCCATATTCCTCCCCCTCCACCTATCCCTGGTGGCACCCTTATTCCTCCCTCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp AGAAGGGGAAGGAATAAGGGTGCCACCAGGGATAGGTaGAGGGGGAGGAATATGGGTGCCACCAGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: RRGRNKGATRDR*RGRNMGATRER
Trigger: CCTCTCCCTGGTGGCACCCATATTCCTCCCCCTCCACCTATCCCTGGTGGCACCCTTATTCCTTCCCCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 90 bp TGGCTCCAGCCGGTTCCCATGCAGCTGCTGCTCCACAGCTTTCAGTaGTGGGCGGACACTGAGAGGCAGGTGGAAATTAAGAGACTGCGC +
Preference number: 6 (lower is better)
Translates to: WLQPVPMQLLLHSFQ*WADTERQVEIKRLR
Trigger: GCGCAGTCTCTTAATTTCCACCTGCCTCTCAGTGTCCGCCCACAACTGAAAGCTGTGGAGCAGCAGCTGCATGGGAACCGGCTGGAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp CTCCAGCAAATCGCTCACCTCCTGGCTCAGGGCGCCTaGACTAATGACCTCCTCCAAAAGCAACGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: LQQIAHLLAQGA*TNDLLQKQRLQ
Trigger: CTGCAGGCGTTGCTTTTGGAGGAGGTCATTAGTTCAGGCGCCCTGAGCCAGGAGGTGAGCGATTTGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 90 bp GAAAACATCCGGAGTGTCCTGGTCCATCAAGTAAGCACCATGGCCTaGGCTGACAGCCTCTCGGTACTCCTGCCGGGCCTCTTCCTTTTC +
Preference number: 6 (lower is better)
Translates to: ENIRSVLVHQVSTMA*ADSLSVLLPGLFLF
Trigger: GAAAAGGAAGAGGCCCGGCAGGAGTACCGAGAGGCTGTCAGCCAAGGCCATGGTGCTTACTTGATGGACCAGGACACTCCGGATGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp CCACGGAGGTCAGGGAGGACGTCCGCAAGCTCCGGTTaGAAGACAAGCATGCAGGCCTCGCTTTCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: PRRSGRTSASSG*KTSMQASLSFS
Trigger: AGAAAAAGAAAGCGAGGCCTGCATGCTTGTCTTTCAACCGGAGCTTGCGGACGTCCTCCCTGACCTCCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp GGGCGGACACTGAGAGGCAGGTGGAAATTAAGAGACTaGGCTGTTGCAGGTGACTGTGCTACTGCAGTCCTG +
Preference number: 6 (lower is better)
Translates to: GRTLRGRWKLRD*AVAGDCATAVL
Trigger: CAGGACTGCAGTAGCACAGTCACCTGCAACAGCGCAGTCTCTTAATTTCCACCTGCCTCTCAGTGTCCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp TCCACGGAGGTCAGGGAGGACGTCCGCAAGCTCCGGTaGAAAGACAAGCATGCAGGCCTCGCTTTCTTTTTC +
Preference number: 6 (lower is better)
Translates to: STEVREDVRKLR*KDKHAGLAFFF
Trigger: GAAAAAGAAAGCGAGGCCTGCATGCTTGTCTTTCAACCGGAGCTTGCGGACGTCCTCCCTGACCTCCGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp CCGGTTCCCATGCAGCTGCTGCTCCACAGCTTTCAGTaGTGGGCGGACACTGAGAGGCAGGTGGAAATTAAG +
Preference number: 6 (lower is better)
Translates to: PVPMQLLLHSFQ*WADTERQVEIK
Trigger: CTTAATTTCCACCTGCCTCTCAGTGTCCGCCCACAACTGAAAGCTGTGGAGCAGCAGCTGCATGGGAACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp TACTCACGTCATTCAGGCTCATGCTGTTCACTGGCTTaGGGAGCGTGTTCTCCAGGTGGCCCAGAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: YSRHSGSCCSLA*GACSPGGPELL
Trigger: CAGAAGCTCTGGGCCACCTGGAGAACACGCTCCTCAAGCCAGTGAACAGCATGAGCCTGAATGACGTGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp TGTCTGAAGGCAGATATTCTGATTGCACTTCAGACCTaGTCCTTTCAGCTGGTGGTGCTGCTGGAGCCGGCG +
Preference number: 6 (lower is better)
Translates to: CLKADILIALQT*SFQLVVLLEPA
Trigger: CGCCGGCTCCAGCAGCACCACCAGCTGAAAGGAGCAGGTCTGAAGTGCAATCAGAATATCTGCCTTCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp TCTGTCCAGATCACCTCCAGCAAATCGCTCACCTCCTaGCTCAGGGCGCCTGAACTAATGACCTCCTCCAAA +
Preference number: 6 (lower is better)
Translates to: SVQITSSKSLTS*LRAPELMTSSK
Trigger: TTTGGAGGAGGTCATTAGTTCAGGCGCCCTGAGCCAGGAGGTGAGCGATTTGCTGGAGGTGATCTGGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp ATGCTGTTCACTGGCTTGAGGAGCGTGTTCTCCAGGTaGCCCAGAGCTTCTGTCCAGATCACCTCCAGCAAA +
Preference number: 6 (lower is better)
Translates to: MLFTGLRSVFSR*PRASVQITSSK
Trigger: TTTGCTGGAGGTGATCTGGACAGAAGCTCTGGGCCACCTGGAGAACACGCTCCTCAAGCCAGTGAACAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp TGCTTTACTCACGTCATTCAGGCTCATGCTGTTCACTaGCTTGAGGAGCGTGTTCTCCAGGTGGCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: CFTHVIQAHAVH*LEERVLQVAQS
Trigger: GCTCTGGGCCACCTGGAGAACACGCTCCTCAAGCCAGTGAACAGCATGAGCCTGAATGACGTGAGTAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp CAGCAAGCGGTAGAACTCGGCCATTGTCTTCTGCAGTaGTCCGGGCGAGTCTCCATTCTTCAGGGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: QQAVELGHCLLQ*SGRVSILQGCL
Trigger: AAGACAGCCCTGAAGAATGGAGACTCGCCCGGACAACTGCAGAAGACAATGGCCGAGTTCTACCGCTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp GAAGGTGGCTTAGGAGGACTGCAAAAAGGTGACTGGTaGAGAACGCCCATCTCAGGGGCTTTGGGAGAGAAG +
Preference number: 6 (lower is better)
Translates to: EGGLGGLQKGDW*RTPISGALGEK
Trigger: CTTCTCTCCCAAAGCCCCTGAGATGGGCGTTCTTCACCAGTCACCTTTTTGCAGTCCTCCTAAGCCACCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp GCGCCTGAACTAATGACCTCCTCCAAAAGCAACGCCTaGAGTTTCTCAGACGCTAACTGTGTTGCTTCGGCC +
Preference number: 6 (lower is better)
Translates to: APELMTSSKSNA*SFSDANCVASA
Trigger: GGCCGAAGCAACACAGTTAGCGTCTGAGAAACTGCAGGCGTTGCTTTTGGAGGAGGTCATTAGTTCAGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp AAGGTTCTCATTCAACGCCTTGTCCTGTTGCCAGGGTaGTACAGTGCCAGGGATGAAGAAGATGGCCACAGG +
Preference number: 6 (lower is better)
Translates to: KVLIQRLVLLPG*YSARDEEDGHR
Trigger: CCTGTGGCCATCTTCTTCATCCCTGGCACTGTAGCACCCTGGCAACAGGACAAGGCGTTGAATGAGAACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp TTCTTTGCCATGAGCAGTTTTCGAAATCCTCCCCTTTaGTTTGGCTCCAGCCGGTTCCCATGCAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: FFAMSSFRNPPL*FGSSRFPCSCC
Trigger: GCAGCAGCTGCATGGGAACCGGCTGGAGCCAAAGCAAAGGGGAGGATTTCGAAAACTGCTCATGGCAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 90 bp TGTCTCCACTGTATCCTGAAGGTTCTCATTCAACGCCTTGTCCTGTaGCCAGGGTGCTACAGTGCCAGGGATGAAGAAGATGGCCACAGG +
Preference number: 6 (lower is better)
Translates to: CLHCILKVLIQRLVL*PGCYSARDEEDGHR
Trigger: CCTGTGGCCATCTTCTTCATCCCTGGCACTGTAGCACCCTGGCAACAGGACAAGGCGTTGAATGAGAACCTTCAGGATACAGTGGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 90 bp ATTTCGACACTTCTTTGCCATGAGCAGTTTTCGAAATCCTCCCCTTaGCTTTGGCTCCAGCCGGTTCCCATGCAGCTGCTGCTCCACAGC +
Preference number: 6 (lower is better)
Translates to: ISTLLCHEQFSKSSP*LWLQPVPMQLLLHS
Trigger: GCTGTGGAGCAGCAGCTGCATGGGAACCGGCTGGAGCCAAAGCAAAGGGGAGGATTTCGAAAACTGCTCATGGCAAAGAAGTGTCGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp CTCTTTTTGAGCCAACAGCCTCAGGTTAACTTCCTCTaGGGCTGGATGCCTGTGAGGCAGCAAGCGGTAGAA +
Preference number: 6 (lower is better)
Translates to: LFLSQQPQVNFL*GWMPVRQQAVE
Trigger: TTCTACCGCTTGCTGCCTCACAGGCATCCAGCCTCAGAGGAAGTTAACCTGAGGCTGTTGGCTCAAAAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp TGTCTGGTAACTGGAAATCTCCAGCCTCTGGAACACTaGAGGGCTCAGCCCTTTGCTCCTCTACTTCGGTAT +
Preference number: 6 (lower is better)
Translates to: CLVTGNLQPLEH*RAQPFAPLLRY
Trigger: ATACCGAAGTAGAGGAGCAAAGGGCTGAGCCCTCCAGTGTTCCAGAGGCTGGAGATTTCCAGTTACCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp ACAGCTTTCAGTTGTGGGCGGACACTGAGAGGCAGGTaGAAATTAAGAGACTGCGCTGTTGCAGGTGACTGT +
Preference number: 6 (lower is better)
Translates to: TAFSCGRTLRGR*KLRDCAVAGDC
Trigger: ACAGTCACCTGCAACAGCGCAGTCTCTTAATTTCCACCTGCCTCTCAGTGTCCGCCCACAACTGAAAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp TCACCCAGCAAAGACAGAGCATACAGGGCAACCTGCTaGGCTTGTGTGAATGTCACACCCTCCATGGAACTG +
Preference number: 6 (lower is better)
Translates to: SPSKDRAYRATC*ACVNVTPSMEL
Trigger: CAGTTCCATGGAGGGTGTGACATTCACACAAGCCAAGCAGGTTGCCCTGTATGCTCTGTCTTTGCTGGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 90 bp AGAGTCCTGGATGAATGCTGGGTTGGCAATCTGCACATCGTTCTTTaGGATGGAGTTCAGATGACACCGACTCAGGACGTCAGCACTGTC +
Preference number: 6 (lower is better)
Translates to: RVLDECWVGNLHIVL*DGVQMTPTQDVSTV
Trigger: GACAGTGCTGACGTCCTGAGTCGGTGTCATCTGAACTCCATCCAAAAGAACGATGTGCAGATTGCCAACCCAGCATTCATCCAGGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 90 bp CTCTTCACCCAGCAAAGACAGAGCATACAGGGCAACCTGCTTGGCTaGTGTGAATGTCACACCCTCCATGGAACTGGAACAGTCAAGACA +
Preference number: 6 (lower is better)
Translates to: LFTQQRQSIQGNLLG*CECHTLHGTGTVKT
Trigger: TGTCTTGACTGTTCCAGTTCCATGGAGGGTGTGACATTCACACAAGCCAAGCAGGTTGCCCTGTATGCTCTGTCTTTGCTGGGTGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 90 bp TTCTGCTCTTCACCCAGCAAAGACAGAGCATACAGGGCAACCTGCTaGGCTTGTGTGAATGTCACACCCTCCATGGAACTGGAACAGTCA +
Preference number: 6 (lower is better)
Translates to: FCSSPSKDRAYRATC*ACVNVTPSMELEQS
Trigger: TGACTGTTCCAGTTCCATGGAGGGTGTGACATTCACACAAGCCAAGCAGGTTGCCCTGTATGCTCTGTCTTTGCTGGGTGAAGAGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp GTGTCAGACTCTCACTCTGGAGGTGCCCATCAGATATaGGGAGAATGTTCCGGAACCCTTCTGAAGGGTACA +
Preference number: 6 (lower is better)
Translates to: VSDSHSGGAHQI*GECSGTLLKGT
Trigger: TGTACCCTTCAGAAGGGTTCCGGAACATTCTCCTCATATCTGATGGGCACCTCCAGAGTGAGAGTCTGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp TCTTCACCCAGCAAAGACAGAGCATACAGGGCAACCTaGTTGGCTTGTGTGAATGTCACACCCTCCATGGAA +
Preference number: 6 (lower is better)
Translates to: SSPSKDRAYRAT*LACVNVTPSME
Trigger: TTCCATGGAGGGTGTGACATTCACACAAGCCAAGCAGGTTGCCCTGTATGCTCTGTCTTTGCTGGGTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp TTCACAAGCTGCAGTGTCAGACTCTCACTCTGGAGGTaGCCATCAGATATGAGGAGAATGTTCCGGAACCCT +
Preference number: 6 (lower is better)
Translates to: FTSCSVRLSLWR*PSDMRRMFRNP
Trigger: AGGGTTCCGGAACATTCTCCTCATATCTGATGGGCACCTCCAGAGTGAGAGTCTGACACTGCAGCTTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp CACATTCTTGGGAGGTATGCATCACGCAAACCAATGTaGAGAGAAAATCCACCGCTGTCCAAGGAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: HILGRYASRKPM*RENPPLSKELP
Trigger: AGGCAGCTCCTTGGACAGCGGTGGATTTTCTCTCCACATTGGTTTGCGTGATGCATACCTCCCAAGAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp CAGCAAAGACAGAGCATACAGGGCAACCTGCTTGGCTaGTGTGAATGTCACACCCTCCATGGAACTGGAACA +
Preference number: 6 (lower is better)
Translates to: QQRQSIQGNLLG*CECHTLHGTGT
Trigger: TGTTCCAGTTCCATGGAGGGTGTGACATTCACACAAGCCAAGCAGGTTGCCCTGTATGCTCTGTCTTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 90 bp TGCACCTTCAGAAGTTTGCTTTCCAGTGCTCTCTCTCCTGGTCTTTaGATCAGCCAGGAGGAAGTGTGCTGTTATCACAAAGGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: CTFRSLLSSALSPGL*ISQEEVCCYHKGAA
Trigger: AGCTGCCCCTTTGTGATAACAGCACACTTCCTCCTGGCTGATCAAAAGACCAGGAGAGAGAGCACTGGAAAGCAAACTTCTGAAGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp GCAATCTGCACATCGTTCTTTTGGATGGAGTTCAGATaGCACCGACTCAGGACGTCAGCACTGTCTACGATG +
Preference number: 6 (lower is better)
Translates to: AICTSFFWMEFR*HRLRTSALSTM
Trigger: CATCGTAGACAGTGCTGACGTCCTGAGTCGGTGTCATCTGAACTCCATCCAAAAGAACGATGTGCAGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp ACACTGTCAAGAGGAACAGGATTCGCAGATGCATCCTaGAGGCCGGCTTTGATGTTTGTGAAGGGCTTGATG +
Preference number: 6 (lower is better)
Translates to: TLSRGTGFADAS*RPALMFVKGLM
Trigger: CATCAAGCCCTTCACAAACATCAAAGCCGGCCTTCAGGATGCATCTGCGAATCCTGTTCCTCTTGACAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp AAGACAGAGCATACAGGGCAACCTGCTTGGCTTGTGTaGATGTCACACCCTCCATGGAACTGGAACAGTCAA +
Preference number: 6 (lower is better)
Translates to: KTEHTGQPAWLV*MSHPPWNWNSQ
Trigger: TTGACTGTTCCAGTTCCATGGAGGGTGTGACATTCACACAAGCCAAGCAGGTTGCCCTGTATGCTCTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp TGTATCCTGAAGGTTCTCATTCAACGCCTTGTCCTGTaGCCAGGGTGCTACAGTGCCAGGGATGAAGAAGAT +
Preference number: 6 (lower is better)
Translates to: CILKVLIQRLVL*PGCYSARDEED
Trigger: ATCTTCTTCATCCCTGGCACTGTAGCACCCTGGCAACAGGACAAGGCGTTGAATGAGAACCTTCAGGATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp TTAAAGCCCAGGAGAGGTGGCTCTGAGTCATGGATGTaGGTATCTCCGACAAGTTTATGGCTGTGGCTAAGC +
Preference number: 6 (lower is better)
Translates to: LKPRRGGSESWM*VSPTSLWLWLS
Trigger: GCTTAGCCACAGCCATAAACTTGTCGGAGATACCAACATCCATGACTCAGAGCCACCTCTCCTGGGCTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp AATGTGAACACTGTCAAGAGGAACAGGATTCGCAGATaGATCCTGAAGGCCGGCTTTGATGTTTGTGAAGGG +
Preference number: 6 (lower is better)
Translates to: NVNTVKRNRIRR*ILKAGFDVCEG
Trigger: CCCTTCACAAACATCAAAGCCGGCCTTCAGGATGCATCTGCGAATCCTGTTCCTCTTGACAGTGTTCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp GCTGTGGAACCAACAGCACAGGTGAACACTCTGGTGTaGTGGATATTTCTTTTCACAAGCTGCAGTGTCAGA +
Preference number: 6 (lower is better)
Translates to: AVEPTAQVNTLV*WIFLFTSCSVR
Trigger: TCTGACACTGCAGCTTGTGAAAAGAAATATCCAGCACACCAGAGTGTTCACCTGTGCTGTTGGTTCCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp CACCTTCAGAAGTTTGCTTTCCAGTGCTCTCTCTCCTaGTCTTTTGATCAGCCAGGAGGAAGTGTGCTGTTA +
Preference number: 6 (lower is better)
Translates to: HLQKFAFQCSLS*SFDQPGGSVLL
Trigger: TAACAGCACACTTCCTCCTGGCTGATCAAAAGACCAGGAGAGAGAGCACTGGAAAGCAAACTTCTGAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp GACGCTAACTGTGTTGCTTCGGCCGTAAAGTGTTCTTaGAGCAGAAATCCTTGTCTCTTCAGGTCTTCCACA +
Preference number: 6 (lower is better)
Translates to: DANCVASAVKCS*SRNPCLFRSST
Trigger: TGTGGAAGACCTGAAGAGACAAGGATTTCTGCTCCAAGAACACTTTACGGCCGAAGCAACACAGTTAGCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp TTTCTTTTCACAAGCTGCAGTGTCAGACTCTCACTCTaGAGGTGCCCATCAGATATGAGGAGAATGTTCCGG +
Preference number: 6 (lower is better)
Translates to: FLFTSCSVRLSL*RCPSDMRRMFR
Trigger: CCGGAACATTCTCCTCATATCTGATGGGCACCTCCAGAGTGAGAGTCTGACACTGCAGCTTGTGAAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp GTGGAACCAACAGCACAGGTGAACACTCTGGTGTGCTaGATATTTCTTTTCACAAGCTGCAGTGTCAGACTC +
Preference number: 6 (lower is better)
Translates to: VEPTAQVNTLVC*IFLFTSCSVRL
Trigger: GAGTCTGACACTGCAGCTTGTGAAAAGAAATATCCAGCACACCAGAGTGTTCACCTGTGCTGTTGGTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp ACTTCAGAGGAGACGGAAACGGGCTGTAGCACTCCATaGCCATCAGAGAGTTTATTGTGCTTTAGTCTCGAA +
Preference number: 6 (lower is better)
Translates to: TSEETETGCSTP*PSESLLCFSLE
Trigger: TTCGAGACTAAAGCACAATAAACTCTCTGATGGCCATGGAGTGCTACAGCCCGTTTCCGTCTCCTCTGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp AAATCCTTAAAGCCCAGGAGAGGTGGCTCTGAGTCATaGATGTTGGTATCTCCGACAAGTTTATGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: KSLKPRRGGSES*MLVSPTSLWLW
Trigger: CCACAGCCATAAACTTGTCGGAGATACCAACATCCATGACTCAGAGCCACCTCTCCTGGGCTTTAAGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp CCAACTTGGTATAAAGAAACTGCAGTACGAGCAAAGTaGCAATCAGATCCAGGAGACGCTCTCGCCCTTTTG +
Preference number: 6 (lower is better)
Translates to: PTWYKETAVRAK*QSDPGDALALL
Trigger: CAAAAGGGCGAGAGCGTCTCCTGGATCTGATTGCCACTTTGCTCGTACTGCAGTTTCTTTATACCAAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp GAAGTTTGCTTTCCAGTGCTCTCTCTCCTGGTCTTTTaGTCAGCCAGGAGGAAGTGTGCTGTTATCACAAAG +
Preference number: 6 (lower is better)
Translates to: EVCFPVLSLLVF*SARRKCAVITK
Trigger: CTTTGTGATAACAGCACACTTCCTCCTGGCTGATCAAAAGACCAGGAGAGAGAGCACTGGAAAGCAAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp AGAGCACAAATCCTTAAAGCCCAGGAGAGGTGGCTCTaGGTCATGGATGTTGGTATCTCCGACAAGTTTATG +
Preference number: 6 (lower is better)
Translates to: RAQILKAQERWL*VMDVGISDKFM
Trigger: CATAAACTTGTCGGAGATACCAACATCCATGACTCAGAGCCACCTCTCCTGGGCTTTAAGGATTTGTGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp TCTGAGTCATGGATGTTGGTATCTCCGACAAGTTTATaGCTGTGGCTAAGCTTAGGTGGACCCAACTTAGGT +
Preference number: 6 (lower is better)
Translates to: SESWMLVSPTSL*LWLSLGGPNLG
Trigger: ACCTAAGTTGGGTCCACCTAAGCTTAGCCACAGCCATAAACTTGTCGGAGATACCAACATCCATGACTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp ACCTCAGTGACTTCGGTGTTTTCCTTCTCTGGGGTGTaGTCTGAAGGCAGATATTCTGATTGCACTTCAGAC +
Preference number: 6 (lower is better)
Translates to: TSVTSVFSFSGV*SEGRYSDCTSD
Trigger: GTCTGAAGTGCAATCAGAATATCTGCCTTCAGACAACACCCCAGAGAAGGAAAACACCGAAGTCACTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 90 bp CTAACCCTGGAAAATTCTTCAGTGTTCTGGTCAACATGTTCGATTTaGCATCGCAAAGCACGGTATTTGGCAAGAGATGGTGGGTTGGGT +
Preference number: 6 (lower is better)
Translates to: LTLENSSVFWSTCSI*HRKARYLARDGGLG
Trigger: ACCCAACCCACCATCTCTTGCCAAATACCGTGCTTTGCGATGCAAAATCGAACATGTTGACCAGAACACTGAAGAATTTTCCAGGGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp GATGACACCGACTCAGGACGTCAGCACTGTCTACGATaGCATGTGTGCACTGAGGGTTTAATAAAAAGGAAA +
Preference number: 6 (lower is better)
Translates to: DDTDSGRQHCLR*HVCTEGLIKRK
Trigger: TTTCCTTTTTATTAAACCCTCAGTGCACACATGTCATCGTAGACAGTGCTGACGTCCTGAGTCGGTGTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp ACCTGGGCTACGAAGTCTATTACTCTTCCCTTAATGTaGACACTGTCAAGAGGAACAGGATTCGCAGATGCA +
Preference number: 6 (lower is better)
Translates to: TWATKSITLPLM*TLSRGTGFADA
Trigger: TGCATCTGCGAATCCTGTTCCTCTTGACAGTGTTCACATTAAGGGAAGAGTAATAGACTTCGTAGCCCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp AACTTTCCAGAAGTCTGTGTTCCCCATGGAAGGTGCTaGAGACATAATGAACTCTGTGGCCATTTTACTGTC +
Preference number: 6 (lower is better)
Translates to: NFPEVCVPHGRC*RHNELCGHFTV
Trigger: GACAGTAAAATGGCCACAGAGTTCATTATGTCTGCAGCACCTTCCATGGGGAACACAGACTTCTGGAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp TCTGTCTGTGATATGGAGGCCTCTGGTTGCTTTTCCTaGCAACTCACGTATGGTAGAAAGTCAACATCTTCT +
Preference number: 6 (lower is better)
Translates to: SVCDMEASGCFS*QLTYGRKSTSS
Trigger: AGAAGATGTTGACTTTCTACCATACGTGAGTTGGCAGGAAAAGCAACCAGAGGCCTCCATATCACAGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp GAATCAATCTCTGTCTGTGATATGGAGGCCTCTGGTTaGTTTTCCTGCCAACTCACGTATGGTAGAAAGTCA +
Preference number: 6 (lower is better)
Translates to: ESISVCDMEASG*FSCQLTYGRKS
Trigger: TGACTTTCTACCATACGTGAGTTGGCAGGAAAAGCAACCAGAGGCCTCCATATCACAGACAGAGATTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp ATCTCCGACAAGTTTATGGCTGTGGCTAAGCTTAGGTaGACCCAACTTAGGTGGTATGAATCCTATAGGAGA +
Preference number: 6 (lower is better)
Translates to: ISDKFMAVAKLR*TQLRWYESYRR
Trigger: TCTCCTATAGGATTCATACCACCTAAGTTGGGTCCACCTAAGCTTAGCCACAGCCATAAACTTGTCGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp AGAAGTTTGCTTTCCAGTGCTCTCTCTCCTGGTCTTTaGATCAGCCAGGAGGAAGTGTGCTGTTATCACAAA +
Preference number: 6 (lower is better)
Translates to: RSLLSSALSPGL*ISQEEVCCYHK
Trigger: TTTGTGATAACAGCACACTTCCTCCTGGCTGATCAAAAGACCAGGAGAGAGAGCACTGGAAAGCAAACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp GTAGGGCATCTCAATGGACATAGCCAGGGAGAAGCTTaGCTCTGCTCCAATTTCCTTTATACGAATTGTCTC +
Preference number: 6 (lower is better)
Translates to: VGHLNGHSQGEA*LCSNFLYTNCL
Trigger: GAGACAATTCGTATAAAGGAAATTGGAGCAGAGCAAAGCTTCTCCCTGGCTATGTCCATTGAGATGCCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp CACTCTGTTATTAGGGCTCTGATGCACTGCGGCACTTaGCAAATTAAGAAAATAGCTCTGAGGAGCCTCAGA +
Preference number: 6 (lower is better)
Translates to: HSVIRALMHCGT*QIKKIALRSLR
Trigger: TCTGAGGCTCCTCAGAGCTATTTTCTTAATTTGCAAAGTGCCGCAGTGCATCAGAGCCCTAATAACAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 90 bp GAAGGCGTCATCCATCTTTATCAGAGACTTGGCAACCATTCCTTCTaGTTCCAACTTGGTATAAAGAAACTGCAGTACGAGCAAAGTGGC +
Preference number: 6 (lower is better)
Translates to: EGVIHLYQRLGNHSF*FQLGIKKLQYEQSG
Trigger: GCCACTTTGCTCGTACTGCAGTTTCTTTATACCAAGTTGGAACAAGAAGGAATGGTTGCCAAGTCTCTGATAAAGATGGATGACGCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp GACAAGATTCCAAGAATGTTCCGCACAGGAGATCCATaGAATAAGAGTCGCACGTTGCCCAGTTTGCTTAAA +
Preference number: 6 (lower is better)
Translates to: DKIPRMFRTGDP*NKSRTLPSLLK
Trigger: TTTAAGCAAACTGGGCAACGTGCGACTCTTATTTCATGGATCTCCTGTGCGGAACATTCTTGGAATCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp CCAATTTCCTTTATACGAATTGTCTCCACTGTATCCTaGAGGTTCTCATTCAACGCCTTGTCCTGTTGCCAG +
Preference number: 6 (lower is better)
Translates to: PISFIRIVSTVS*RFSFNALSCCQ
Trigger: CTGGCAACAGGACAAGGCGTTGAATGAGAACCTTCAGGATACAGTGGAGACAATTCGTATAAAGGAAATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS TCA 72 bp AGATGTGACGATTTGCTGTGGAACCAACAGCACAGGTaGACACTCTGGTGTGCTGGATATTTCTTTTCACAA +
Preference number: 6 (lower is better)
Translates to: RCDDLLWNQQHR*TLWCAGYFFSQ
Trigger: TTGTGAAAAGAAATATCCAGCACACCAGAGTGTTCACCTGTGCTGTTGGTTCCACAGCAAATCGTCACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp AATATTCAATTGCACCTTCAGAAGTTTGCTTTCCAGTaGTCTCTCTCCTGGTCTTTTGATCAGCCAGGAGGA +
Preference number: 6 (lower is better)
Translates to: NIQLHLQKFAFQ*SLSWSFDQPGG
Trigger: TCCTCCTGGCTGATCAAAAGACCAGGAGAGAGAGCACTGGAAAGCAAACTTCTGAAGGTGCAATTGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp CATCTCAATGGACATAGCCAGGGAGAAGCTTTGCTCTaGTCCAATTTCCTTTATACGAATTGTCTCCACTGT +
Preference number: 6 (lower is better)
Translates to: HLNGHSQGEALL*SNFLYTNCLHC
Trigger: ACAGTGGAGACAATTCGTATAAAGGAAATTGGAGCAGAGCAAAGCTTCTCCCTGGCTATGTCCATTGAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp ATGGCTGTGGCTAAGCTTAGGTGGACCCAACTTAGGTaGTATGAATCCTATAGGAGAAAGAGAAAATTGGGT +
Preference number: 6 (lower is better)
Translates to: MAVAKLRWTQLR*YESYRRKRKLG
Trigger: ACCCAATTTTCTCTTTCTCCTATAGGATTCATACCACCTAAGTTGGGTCCACCTAAGCTTAGCCACAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp CGCTTTCTTTTTCTGGATGTTTTTCAACCCACATTCTaGGGAGGTATGCATCACGCAAACCAATGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: RFLFLDVFQPTF*GGMHHANQCGE
Trigger: CTCTCCACATTGGTTTGCGTGATGCATACCTCCCAAGAATGTGGGTTGAAAAACATCCAGAAAAAGAAAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 90 bp TTCAATCATGTAGGGCATCTCAATGGACATAGCCAGGGAGAAGCTTaGCTCTGCTCCAATTTCCTTTATACGAATTGTCTCCACTGTATC +
Preference number: 6 (lower is better)
Translates to: FNHVGHLNGHSQGEA*LCSNFLYTNCLHCI
Trigger: GATACAGTGGAGACAATTCGTATAAAGGAAATTGGAGCAGAGCAAAGCTTCTCCCTGGCTATGTCCATTGAGATGCCCTACATGATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp GCAAAATTCTTTCTCTTGGATGAATGCTTGCAGAGTTaGTTGTGTACAATGAGGAATGAAGCCGTAGACCAG +
Preference number: 6 (lower is better)
Translates to: AKFFLLDECLQS*LCTMRNEAVDQ
Trigger: CTGGTCTACGGCTTCATTCCTCATTGTACACAAGCAACTCTGCAAGCATTCATCCAAGAGAAAGAATTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp GCTTTCTTTTTCTGGATGTTTTTCAACCCACATTCTTaGGAGGTATGCATCACGCAAACCAATGTGGAGAGA +
Preference number: 6 (lower is better)
Translates to: AFFFWMFFNPHS*EVCITQTNVER
Trigger: TCTCTCCACATTGGTTTGCGTGATGCATACCTCCCAAGAATGTGGGTTGAAAAACATCCAGAAAAAGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CCA 72 bp TCAGAGACTTGGCAACCATTCCTTCTTGTTCCAACTTaGTATAAAGAAACTGCAGTACGAGCAAAGTGGCAA +
Preference number: 6 (lower is better)
Translates to: SETWQPFLLVPT*YKETAVRAKWQ
Trigger: TTGCCACTTTGCTCGTACTGCAGTTTCTTTATACCAAGTTGGAACAAGAAGGAATGGTTGCCAAGTCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp CATCGCAAAGCACGGTATTTGGCAAGAGATGGTGGGTaGGGTTTGGATAAATTAGTTTCACAAACATTCACC +
Preference number: 6 (lower is better)
Translates to: HRKARYLARDGG*GLDKLVSQTFT
Trigger: GGTGAATGTTTGTGAAACTAATTTATCCAAACCCAACCCACCATCTCTTGCCAAATACCGTGCTTTGCGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 90 bp GTCTTCCACATAACTTTCATAATATTCAATTGCACCTTCAGAAGTTaGCTTTCCAGTGCTCTCTCTCCTGGTCTTTTGATCAGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: VFHITFIIFNCTFRS*LSSALSPGLLISQE
Trigger: CTCCTGGCTGATCAAAAGACCAGGAGAGAGAGCACTGGAAAGCAAACTTCTGAAGGTGCAATTGAATATTATGAAAGTTATGTGGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 90 bp GTGTTCTGGTCAACATGTTCGATTTTGCATCGCAAAGCACGGTATTaGGCAAGAGATGGTGGGTTGGGTTTGGATAAATTAGTTTCACAA +
Preference number: 6 (lower is better)
Translates to: VFWSTCSILHRKARY*ARDGGLGLDKLVSQ
Trigger: TTGTGAAACTAATTTATCCAAACCCAACCCACCATCTCTTGCCAAATACCGTGCTTTGCGATGCAAAATCGAACATGTTGACCAGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp TGCTTCGGCCGTAAAGTGTTCTTGGAGCAGAAATCCTaGTCTCTTCAGGTCTTCCACATAACTTTCATAATA +
Preference number: 6 (lower is better)
Translates to: CFGRKVFLEQKS*SLQVFHITFII
Trigger: TATTATGAAAGTTATGTGGAAGACCTGAAGAGACAAGGATTTCTGCTCCAAGAACACTTTACGGCCGAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp TCAACATGTTCGATTTTGCATCGCAAAGCACGGTATTaGGCAAGAGATGGTGGGTTGGGTTTGGATAAATTA +
Preference number: 6 (lower is better)
Translates to: STCSILHRKARY*ARDGGLGLDKL
Trigger: TAATTTATCCAAACCCAACCCACCATCTCTTGCCAAATACCGTGCTTTGCGATGCAAAATCGAACATGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp AGAAGCTTTGCTCTGCTCCAATTTCCTTTATACGAATaGTCTCCACTGTATCCTGAAGGTTCTCATTCAACG +
Preference number: 6 (lower is better)
Translates to: RSFALLQFPLYE*SPLYPEGSHST
Trigger: CGTTGAATGAGAACCTTCAGGATACAGTGGAGACAATTCGTATAAAGGAAATTGGAGCAGAGCAAAGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 90 bp TCGATTTTGCATCGCAAAGCACGGTATTTGGCAAGAGATGGTGGGTaGGGTTTGGATAAATTAGTTTCACAAACATTCACCATGTCTCTT +
Preference number: 6 (lower is better)
Translates to: SILHRKARYLARDGG*GLDKLVSQTFTMSL
Trigger: AAGAGACATGGTGAATGTTTGTGAAACTAATTTATCCAAACCCAACCCACCATCTCTTGCCAAATACCGTGCTTTGCGATGCAAAATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 90 bp TGCTTTTCCTGCCAACTCACGTATGGTAGAAAGTCAACATCTTCTTaGGCAACAAGTTCCGAAATATTTGGGACATTAGCAAAAGGAATC +
Preference number: 6 (lower is better)
Translates to: CFSCQLTYGRKSTSS*ATSSEIFGTLAKGI
Trigger: GATTCCTTTTGCTAATGTCCCAAATATTTCGGAACTTGTTGCCAAAGAAGATGTTGACTTTCTACCATACGTGAGTTGGCAGGAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 72 bp ATCCATCTTTATCAGAGACTTGGCAACCATTCCTTCTaGTTCCAACTTGGTATAAAGAAACTGCAGTACGAG +
Preference number: 6 (lower is better)
Translates to: IHLYQRLGNHSF*FQLGIKKLQYE
Trigger: CTCGTACTGCAGTTTCTTTATACCAAGTTGGAACAAGAAGGAATGGTTGCCAAGTCTCTGATAAAGATGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS GCA 72 bp CTTCAGGTCTTCCACATAACTTTCATAATATTCAATTaGACCTTCAGAAGTTTGCTTTCCAGTGCTCTCTCT +
Preference number: 6 (lower is better)
Translates to: LQVFHITFIIFN*TFRSLLSSALS
Trigger: AGAGAGAGCACTGGAAAGCAAACTTCTGAAGGTGCAATTGAATATTATGAAAGTTATGTGGAAGACCTGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2
CDS CAA 90 bp GCACATTCCTCATCTGAGGAAGTCTCAATACTTGTTAAAAGATCATaGGCTATAAATGCTGCTGCTTCATCTGTATCGGTTTCAAAAGAA +
Preference number: 6 (lower is better)
Translates to: AHSSSEEVSILVKRS*AINAAASSVSVSKE
Trigger: TTCTTTTGAAACCGATACAGATGAAGCAGCAGCATTTATAGCCAATGATCTTTTAACAAGTATTGAGACTTCCTCAGATGAGGAATGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000161553.2