Pregenerated sensors for PARP16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032392Ensembl transcript IDs: ENSMUST00000069000.9, ENSMUST00000213396.2, ENSMUST00000216486.2, ENSMUST00000216702.2
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GGAGGCTCAGCCCATGGAGACCCGTGGCCCACTGAGGCAGGCCTCTaGTGTGAAGGCTGCCGGGCCCCTGAGAGCCTAGAGTGTTGGGTA | + |
Preference number: 1 (lower is better) Translates to: GGSAHGDPWPTEAGL*CEGCRAPESLECWV Trigger: TACCCAACACTCTAGGCTCTCAGGGGCCCGGCAGCCTTCACAGCAGAGGCCTGCCTCAGTGGGCCACGGGTCTCCATGGGCTGAGCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR CCA 90 bp | TCAACCTCAGGCTTCTCGGATGGAGGCTCAGCCCATGGAGACCCGTaGCCCACTGAGGCAGGCCTCTGCTGTGAAGGCTGCCGGGCCCCT | + |
Preference number: 1 (lower is better) Translates to: STSGFSDGGSAHGDP*PTEAGLCCEGCRAP Trigger: AGGGGCCCGGCAGCCTTCACAGCAGAGGCCTGCCTCAGTGGGCCACGGGTCTCCATGGGCTGAGCCTCCATCCGAGAAGCCTGAGGTTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR GCA 90 bp | CATGGAGACCCGTGGCCCACTGAGGCAGGCCTCTGCTGTGAAGGCTaGCGGGCCCCTGAGAGCCTAGAGTGTTGGGTATCAAGGCAGCTT | + |
Preference number: 1 (lower is better) Translates to: HGDPWPTEAGLCCEG*RAPESLECWVSRQL Trigger: AAGCTGCCTTGATACCCAACACTCTAGGCTCTCAGGGGCCCGGCAGCCTTCACAGCAGAGGCCTGCCTCAGTGGGCCACGGGTCTCCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR CCA 90 bp | GGCCTCTGCTGTGAAGGCTGCCGGGCCCCTGAGAGCCTAGAGTGTTaGGTATCAAGGCAGCTTTGTGGGAATGAGGACCCTGGTGAGCCT | + |
Preference number: 1 (lower is better) Translates to: GLCCEGCRAPESLEC*VSRQLCGNEDPGEP Trigger: AGGCTCACCAGGGTCCTCATTCCCACAAAGCTGCCTTGATACCCAACACTCTAGGCTCTCAGGGGCCCGGCAGCCTTCACAGCAGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR CCA 90 bp | GGAAACTCCATTCCCAGCAGACAGGGGTCTTCTGCCGCTGAAACCTaGCAGGAAGGAGGGATAAACACCACAGCAAGGATGGCTGGGCCT | + |
Preference number: 1 (lower is better) Translates to: GNSIPSRQGSSAAET*QEGGINTTARMAGP Trigger: AGGCCCAGCCATCCTTGCTGTGGTGTTTATCCCTCCTTCCTGCCAGGTTTCAGCGGCAGAAGACCCCTGTCTGCTGGGAATGGAGTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR TCA 90 bp | CTGTGCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTaGCACACAGGAGGTAGAGGACAAGTTTCCATAAGGCACACGGTG | + |
Preference number: 1 (lower is better) Translates to: LCTPANGPQTRPDRM*HTGGRGQVSIRHTV Trigger: CACCGTGTGCCTTATGGAAACTTGTCCTCTACCTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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3UTR TCA 90 bp | GATTCTTGCTCGGCTGCGGTCTATTTCCTTGGAATCCTCAGCCCCTaGGACAGGCTGATTTCCTGTGAGCTCAAGGCCAGCCTGGTCTGC | + |
Preference number: 1 (lower is better) Translates to: DSCSAAVYFLGILSP*DRLISCELKASLVC Trigger: GCAGACCAGGCTGGCCTTGAGCTCACAGGAAATCAGCCTGTCTCAGGGGCTGAGGATTCCAAGGAAATAGACCGCAGCCGAGCAAGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR TCA 90 bp | CCTCTATGGAAACTCCATTCCCAGCAGACAGGGGTCTTCTGCCGCTaGAACCTGGCAGGAAGGAGGGATAAACACCACAGCAAGGATGGC | + |
Preference number: 1 (lower is better) Translates to: PLWKLHSQQTGVFCR*NLAGRRDKHHSKDG Trigger: GCCATCCTTGCTGTGGTGTTTATCCCTCCTTCCTGCCAGGTTTCAGCGGCAGAAGACCCCTGTCTGCTGGGAATGGAGTTTCCATAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR CCA 90 bp | CCCACTCCAAGCACCTGGGATCATCTCTTCACACGATTCCAGAAGTaGTGGAACACAGAGGAGTTGGTGACACTCACGATGAGCAGCAGC | + |
Preference number: 1 (lower is better) Translates to: PTPSTWDHLFTRFQK*WNTEELVTLTMSSS Trigger: GCTGCTGCTCATCGTGAGTGTCACCAACTCCTCTGTGTTCCACCACTTCTGGAATCGTGTGAAGAGATGATCCCAGGTGCTTGGAGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR CCA 90 bp | GGGTATCAAGGCAGCTTTGTGGGAATGAGGACCCTGGTGAGCCTATaGCTTGGACCCTTCTCCATAACAACACCAGAAAGAGGCTGTGGA | + |
Preference number: 1 (lower is better) Translates to: GYQGSFVGMRTLVSL*LGPFSITTPERGCG Trigger: TCCACAGCCTCTTTCTGGTGTTGTTATGGAGAAGGGTCCAAGCCATAGGCTCACCAGGGTCCTCATTCCCACAAAGCTGCCTTGATACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR CCA 90 bp | ACTCCAAGCACCTGGGATCATCTCTTCACACGATTCCAGAAGTGGTaGAACACAGAGGAGTTGGTGACACTCACGATGAGCAGCAGCAGC | + |
Preference number: 1 (lower is better) Translates to: TPSTWDHLFTRFQKW*NTEELVTLTMSSSS Trigger: GCTGCTGCTGCTCATCGTGAGTGTCACCAACTCCTCTGTGTTCCACCACTTCTGGAATCGTGTGAAGAGATGATCCCAGGTGCTTGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR CCA 90 bp | TTAAATCTGCATTTTGTTATCCCGCCTGTGGCTCCTCCTCTTGTGTaGTTAAGGAGGGAGGGGGTACAGCTGTGGCAGAGACGGTTGTTG | + |
Preference number: 1 (lower is better) Translates to: LNLHFVIPPVAPPLV*LRREGVQLWQRRLL Trigger: CAACAACCGTCTCTGCCACAGCTGTACCCCCTCCCTCCTTAACCACACAAGAGGAGGAGCCACAGGCGGGATAACAAAATGCAGATTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR CCA 90 bp | CATTCTGTCTTCCAAAAGGCATTAGCATCCGGGCCGGCCTCCATCTaGGCAATTGTAAACACACCTCGGACAGCTTGGACACTTTGCTTT | + |
Preference number: 1 (lower is better) Translates to: HSVFQKALASGPASI*AIVNTPRTAWTLCF Trigger: AAAGCAAAGTGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCCGGATGCTAATGCCTTTTGGAAGACAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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3UTR-3UTR CCA 90 bp | TCGTCCTGTGCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTGACGACAACCAGGAGAGCTaGCTCGAGGCCCTCTTGGGC | + |
Preference number: 2 (lower is better) Translates to: SSCAPLQMVPRLDLTGCDDNQES*LEALLG Trigger: GCCCAAGAGGGCCTCGAGCCAGCTCTCCTGGTTGTC...GTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGCACAGGACGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR-3UTR CCA 90 bp | ACTCCATTCCCAGCAGACAGGGGTCTTCTGCCGCTGAAACCTGGCAGGAAGGAGAAGGCACACGGTGAGTaGCCCCACTCCAAGCACCTG | + |
Preference number: 2 (lower is better) Translates to: TPFPADRGLLPLKPGRKEKAHGE*PHSKHL Trigger: CAGGTGCTTGGAGTGGGGCCACTCACCGTGTGCCTT...CTCCTTCCTGCCAGGTTTCAGCGGCAGAAGACCCCTGTCTGCTGGGAATGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR-3UTR TCA 90 bp | TCCGGGCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACATCCTTTGGCTCTGGCTaGAGAGCCACCTCCCTAGAC | + |
Preference number: 2 (lower is better) Translates to: SGPASIWAIVNTPRTAWTSFGSG*RATSLD Trigger: GTCTAGGGAGGTGGCTCTTCAGCCAGAGCCAAAGGA...TGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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3UTR-3UTR TCA 90 bp | CTGAAGAGCCACCTCCCTAGACTATTTAGGAGGAAGCAGAGGGTAGGACACCCCCCCCCTCGCTGTGCTTaGTTCTTGCTCGGCTGCGGT | + |
Preference number: 2 (lower is better) Translates to: LKSHLPRLFRRKQRVGHPPPRCA*FLLGCG Trigger: ACCGCAGCCGAGCAAGAATCAAGCACAGCGAGGGGG...GGGGTGTCCTACCCTCTGCTTCCTCCTAAATAGTCTAGGGAGGTGGCTCTTCAG 59% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR-3UTR TCA 90 bp | CCAGAAAGAGGCTGTGGATGTAGCCACTCGGTGCTCCAGGTTCACACATCTCCCTCCTTTGGCTCTGGCTaGAGAGCCACCTCCCTAGAC | + |
Preference number: 2 (lower is better) Translates to: PERGCGCSHSVLQVHTSPSFGSG*RATSLD Trigger: GTCTAGGGAGGTGGCTCTTCAGCCAGAGCCAAAGGA...GGGAGATGTGTGAACCTGGAGCACCGAGTGGCTACATCCACAGCCTCTTTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR-3UTR CCA 90 bp | CTGAAGAGCCACCTCCCTAGACTATTTAGGAGGAAGCAGAGGGTAGGACACCCCAAGGCACACGGTGAGTaGCCCCACTCCAAGCACCTG | + |
Preference number: 2 (lower is better) Translates to: LKSHLPRLFRRKQRVGHPKAHGE*PHSKHL Trigger: CAGGTGCTTGGAGTGGGGCCACTCACCGTGTGCCTT...GGGGTGTCCTACCCTCTGCTTCCTCCTAAATAGTCTAGGGAGGTGGCTCTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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3UTR-3UTR CCA 90 bp | GTCCCCAGACTCGACCTGACCGGATGTGACACACAGGAGGTAGAGGACAAGTTTAAGGCACACGGTGAGTaGCCCCACTCCAAGCACCTG | + |
Preference number: 2 (lower is better) Translates to: VPRLDLTGCDTQEVEDKFKAHGE*PHSKHL Trigger: CAGGTGCTTGGAGTGGGGCCACTCACCGTGTGCCTT...AAACTTGTCCTCTACCTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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3UTR-3UTR TCA 90 bp | CTGAAGAGCCACCTCCCTAGACTATTTAGGAGGAAGCAGAGGGTAGGACACCCCGCCCCTGAGACAGGCTaGTTTCCTGTGAGCTCAAGG | + |
Preference number: 2 (lower is better) Translates to: LKSHLPRLFRRKQRVGHPAPETG*FPVSSR Trigger: CCTTGAGCTCACAGGAAATCAGCCTGTCTCAGGGGC...GGGGTGTCCTACCCTCTGCTTCCTCCTAAATAGTCTAGGGAGGTGGCTCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR-3UTR CCA 90 bp | TCGTCCTGTGCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTGACCAGGACTTTTTCCTTTaGCTCTGGCTGAAGAGCCAC | + |
Preference number: 2 (lower is better) Translates to: SSCAPLQMVPRLDLTGCDQDFFL*LWLKSH Trigger: GTGGCTCTTCAGCCAGAGCCAAAGGAAAAAGTCCTG...GTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGCACAGGACGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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3UTR-3UTR CCA 90 bp | AGGCAGCTTTGTGGGAATGAGGACCCTGGTGAGCCTATGGCTTGGACCCTTCTCGGGCCGGCCTCCATCTaGGCAATTGTAAACACACCT | + |
Preference number: 2 (lower is better) Translates to: RQLCGNEDPGEPMAWTLLGPASI*AIVNTP Trigger: AGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCC...GAGAAGGGTCCAAGCCATAGGCTCACCAGGGTCCTCATTCCCACAAAGCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR-3UTR CCA 90 bp | AGGCAGCTTTGTGGGAATGAGGACCCTGGTGAGCCTATGGCTTGGACCCTTCTCGAGGGGGTACAGCTGTaGCAGAGACGGTTGTTGATC | + |
Preference number: 2 (lower is better) Translates to: RQLCGNEDPGEPMAWTLLEGVQL*QRRLLI Trigger: GATCAACAACCGTCTCTGCCACAGCTGTACCCCCTC...GAGAAGGGTCCAAGCCATAGGCTCACCAGGGTCCTCATTCCCACAAAGCTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR-3UTR TCA 90 bp | AGGCAGCTTTGTGGGAATGAGGACCCTGGTGAGCCTATGGCTTGGACCCTTCTCCCCTCTTGGGTGTCTTaGGTCAAAACAAGGCAGTCG | + |
Preference number: 2 (lower is better) Translates to: RQLCGNEDPGEPMAWTLLPSWVS*VKTRQS Trigger: CGACTGCCTTGTTTTGACTCAAGACACCCAAGAGGG...GAGAAGGGTCCAAGCCATAGGCTCACCAGGGTCCTCATTCCCACAAAGCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR-3UTR CCA 90 bp | TGCTTCTGGGAATACACCAGCAGGTACTTCACCCGCAGAAGCTGGTTATTGGTGAAGGCACACGGTGAGTaGCCCCACTCCAAGCACCTG | + |
Preference number: 2 (lower is better) Translates to: CFWEYTSRYFTRRSWLLVKAHGE*PHSKHL Trigger: CAGGTGCTTGGAGTGGGGCCACTCACCGTGTGCCTT...CACCAATAACCAGCTTCTGCGGGTGAAGTACCTGCTGGTGTATTCCCAGAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR-3UTR CCA 90 bp | CCAGAAAGAGGCTGTGGATGTAGCCACTCGGTGCTCCAGGTTCACACATCTCCCTTGTTATCCCGCCTGTaGCTCCTCCTCTTGTGTGGT | + |
Preference number: 2 (lower is better) Translates to: PERGCGCSHSVLQVHTSPLLSRL*LLLLCG Trigger: ACCACACAAGAGGAGGAGCCACAGGCGGGATAACAA...GGGAGATGTGTGAACCTGGAGCACCGAGTGGCTACATCCACAGCCTCTTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR-3UTR CCA 90 bp | GGCTGGGCCTCTGCTTACCACTCAACCTCAGGCTTCTCGGATGGAGGCTCAGCCATCTCCCCCTCTATTTaGCTCATAGAGGCTAACTTG | + |
Preference number: 2 (lower is better) Translates to: GWASAYHSTSGFSDGGSAISPSI*LIEANL Trigger: CAAGTTAGCCTCTATGAGCCAAATAGAGGGGGAGAT...GGCTGAGCCTCCATCCGAGAAGCCTGAGGTTGAGTGGTAAGCAGAGGCCCAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR-3UTR CCA 90 bp | CTCCTCTATGGAAACTCCATTCCCAGCAGACAGGGGTCTTCTGCCGCTGAAACCACACCACAGCAAGGATaGCTGGGCCTCTGCTTACCA | + |
Preference number: 2 (lower is better) Translates to: LLYGNSIPSRQGSSAAETTPQQG*LGLCLP Trigger: TGGTAAGCAGAGGCCCAGCCATCCTTGCTGTGGTGT...GGTTTCAGCGGCAGAAGACCCCTGTCTGCTGGGAATGGAGTTTCCATAGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR-3UTR CCA 90 bp | AGAGGAGTTGGTGACACTCACGATGAGCAGCAGCAGCAGATACAGGGACATCATTCACGAACCAGTGGCTaGACAACCAGGAGAGCTGGC | + |
Preference number: 2 (lower is better) Translates to: RGVGDTHDEQQQQIQGHHSRTSG*TTRRAG Trigger: GCCAGCTCTCCTGGTTGTCCAGCCACTGGTTCGTGA...ATGATGTCCCTGTATCTGCTGCTGCTGCTCATCGTGAGTGTCACCAACTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR-3UTR TCA 90 bp | AGAAACACGACAGTCCCTCTTGGGTGTCTTGAGTCAAAACAAGGCAGTCGCCTATCCTTTGGCTCTGGCTaGAGAGCCACCTCCCTAGAC | + |
Preference number: 2 (lower is better) Translates to: RNTTVPLGCLESKQGSRLSFGSG*RATSLD Trigger: GTCTAGGGAGGTGGCTCTTCAGCCAGAGCCAAAGGA...TAGGCGACTGCCTTGTTTTGACTCAAGACACCCAAGAGGGACTGTCGTGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR-3UTR TCA 90 bp | ACTCCATTCCCAGCAGACAGGGGTCTTCTGCCGCTGAAACCTGGCAGGAAGGAGACATTTGGTTCCGTTTaGGCTGTAATCAGCAGTTGG | + |
Preference number: 2 (lower is better) Translates to: TPFPADRGLLPLKPGRKETFGSV*AVISSW Trigger: CCAACTGCTGATTACAGCTCAAACGGAACCAAATGT...CTCCTTCCTGCCAGGTTTCAGCGGCAGAAGACCCCTGTCTGCTGGGAATGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR-3UTR CCA 90 bp | GAGGAAGCAGAGGGTAGGACACCCCTGAAACTGACAAGTGAGGGGCCAGGGATCTTCACCCGCAGAAGCTaGTTATTGGTGACTACAAAG | + |
Preference number: 2 (lower is better) Translates to: EEAEGRTPLKLTSEGPGIFTRRS*LLVTTK Trigger: CTTTGTAGTCACCAATAACCAGCTTCTGCGGGTGAA...GATCCCTGGCCCCTCACTTGTCAGTTTCAGGGGTGTCCTACCCTCTGCTTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR CAA 90 bp | GATCATCTCTTCACACGATTCCAGAAGTGGTGGAACACAGAGGAGTaGGTGACACTCACGATGAGCAGCAGCAGCAGATACAGGGACATC | + |
Preference number: 2 (lower is better) Translates to: DHLFTRFQKWWNTEE*VTLTMSSSSRYRDI Trigger: GATGTCCCTGTATCTGCTGCTGCTGCTCATCGTGAGTGTCACCAACTCCTCTGTGTTCCACCACTTCTGGAATCGTGTGAAGAGATGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR-3UTR CCA 90 bp | GGTGCTCCAGGTTCACACATCTCCCCCTCTATTTGGCTCATAGAGGCTAACTTGCAGGACTTTTTCCTTTaGCTCTGGCTGAAGAGCCAC | + |
Preference number: 2 (lower is better) Translates to: GAPGSHISPSIWLIEANLQDFFL*LWLKSH Trigger: GTGGCTCTTCAGCCAGAGCCAAAGGAAAAAGTCCTG...CAAGTTAGCCTCTATGAGCCAAATAGAGGGGGAGATGTGTGAACCTGGAGCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR-3UTR TCA 90 bp | ATAAACACCACAGCAAGGATGGCTGGGCCTCTGCTTACCACTCAACCTCAGGCTCCACTGATATTTTTATaGGAAACACGACAGTCCCTC | + |
Preference number: 2 (lower is better) Translates to: INTTARMAGPLLTTQPQAPLIFL*ETRQSL Trigger: GAGGGACTGTCGTGTTTCTCATAAAAATATCAGTGG...AGCCTGAGGTTGAGTGGTAAGCAGAGGCCCAGCCATCCTTGCTGTGGTGTTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR-3UTR TCA 90 bp | TCAAAACAAGGCAGTCGCCTAATGATTTATTGTTCCCGTTGCACACATTCTGTCCAGGCTGATTTCCTGTaGGCTCAAGGCCAGCCTGGT | + |
Preference number: 2 (lower is better) Translates to: SKQGSRLMIYCSRCTHSVQADFL*AQGQPG Trigger: ACCAGGCTGGCCTTGAGCTCACAGGAAATCAGCCTG...GACAGAATGTGTGCAACGGGAACAATAAATCATTAGGCGACTGCCTTGTTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR-3UTR CCA 90 bp | GAGTCAAAACAAGGCAGTCGCCTAATGATTTATTGTTCCCGTTGCACACATTCTCAGGACTTTTTCCTTTaGCTCTGGCTGAAGAGCCAC | + |
Preference number: 2 (lower is better) Translates to: ESKQGSRLMIYCSRCTHSQDFFL*LWLKSH Trigger: GTGGCTCTTCAGCCAGAGCCAAAGGAAAAAGTCCTG...AGAATGTGTGCAACGGGAACAATAAATCATTAGGCGACTGCCTTGTTTTGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 |
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3UTR-3UTR CCA 90 bp | CAGGACTTTTTCCTTTGGCTCTGGCTGAAGAGCCACCTCCCTAGACTATTTAGGCAATCAGTACACTTATaGCATATAAAACTCGTCCTG | + |
Preference number: 2 (lower is better) Translates to: QDFFLWLWLKSHLPRLFRQSVHL*HIKLVL Trigger: CAGGACGAGTTTTATATGCCATAAGTGTACTGATTG...CCTAAATAGTCTAGGGAGGTGGCTCTTCAGCCAGAGCCAAAGGAAAAAGTCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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3UTR GCA 72 bp | GCCCATGGAGACCCGTGGCCCACTGAGGCAGGCCTCTaGTGTGAAGGCTGCCGGGCCCCTGAGAGCCTAGAG | + |
Preference number: 3 (lower is better) Translates to: AHGDPWPTEAGL*CEGCRAPESLE Trigger: CTCTAGGCTCTCAGGGGCCCGGCAGCCTTCACAGCAGAGGCCTGCCTCAGTGGGCCACGGGTCTCCATGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR CCA 72 bp | CAGGAGAGCTGGCTCGAGGCCCTCTTGGGCTGCTTCTaGGAATACACCAGCAGGTACTTCACCCGCAGAAGC | + |
Preference number: 3 (lower is better) Translates to: QESWLEALLGCF*EYTSRYFTRRS Trigger: GCTTCTGCGGGTGAAGTACCTGCTGGTGTATTCCCAGAAGCAGCCCAAGAGGGCCTCGAGCCAGCTCTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR-3UTR CAA 90 bp | GAGGAAGCAGAGGGTAGGACACCCCTGAAACTGACAAGTGAGGGGCCAGGGATCCTGCGGTCTATTTCCTaGGAATCCTCAGCCCCTGAG | + |
Preference number: 3 (lower is better) Translates to: EEAEGRTPLKLTSEGPGILRSIS*ESSAPE Trigger: CTCAGGGGCTGAGGATTCCAAGGAAATAGACCGCAG...GATCCCTGGCCCCTCACTTGTCAGTTTCAGGGGTGTCCTACCCTCTGCTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR CCA 72 bp | ATGATCACGAACCAGTGGCTGGACAACCAGGAGAGCTaGCTCGAGGCCCTCTTGGGCTGCTTCTGGGAATAC | + |
Preference number: 3 (lower is better) Translates to: MITNQWLDNQES*LEALLGCFWEY Trigger: GTATTCCCAGAAGCAGCCCAAGAGGGCCTCGAGCCAGCTCTCCTGGTTGTCCAGCCACTGGTTCGTGATCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR-3UTR CAA 90 bp | TCCGGGCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACAGCAGGACTTTTTCCTTaGGCTCTGGCTGAAGAGCCA | + |
Preference number: 3 (lower is better) Translates to: SGPASIWAIVNTPRTAWTAGLFP*ALAEEP Trigger: TGGCTCTTCAGCCAGAGCCAAAGGAAAAAGTCCTGC...TGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCCGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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3UTR-3UTR CAA 90 bp | CACGATGAGCAGCAGCAGCAGATACAGGGACATCATGATCACGAACCAGTGGCTTGGCTCGAGGCCCTCTaGGGCTGCTTCTGGGAATAC | + |
Preference number: 3 (lower is better) Translates to: HDEQQQQIQGHHDHEPVAWLEAL*GCFWEY Trigger: GTATTCCCAGAAGCAGCCCAAGAGGGCCTCGAGCCA...AGCCACTGGTTCGTGATCATGATGTCCCTGTATCTGCTGCTGCTGCTCATCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR TCA 72 bp | TCGGCTGCGGTCTATTTCCTTGGAATCCTCAGCCCCTaGGACAGGCTGATTTCCTGTGAGCTCAAGGCCAGC | + |
Preference number: 3 (lower is better) Translates to: SAAVYFLGILSP*DRLISCELKAS Trigger: GCTGGCCTTGAGCTCACAGGAAATCAGCCTGTCTCAGGGGCTGAGGATTCCAAGGAAATAGACCGCAGCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
||
3UTR CCA 72 bp | GCAGGAAGGAGGGATAAACACCACAGCAAGGATGGCTaGGCCTCTGCTTACCACTCAACCTCAGGCTTCTCG | + |
Preference number: 3 (lower is better) Translates to: AGRRDKHHSKDG*ASAYHSTSGFS Trigger: CGAGAAGCCTGAGGTTGAGTGGTAAGCAGAGGCCCAGCCATCCTTGCTGTGGTGTTTATCCCTCCTTCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
||
3UTR TCA 72 bp | AAACTCCATTCCCAGCAGACAGGGGTCTTCTGCCGCTaGAACCTGGCAGGAAGGAGGGATAAACACCACAGC | + |
Preference number: 3 (lower is better) Translates to: KLHSQQTGVFCR*NLAGRRDKHHS Trigger: GCTGTGGTGTTTATCCCTCCTTCCTGCCAGGTTTCAGCGGCAGAAGACCCCTGTCTGCTGGGAATGGAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR CCA 72 bp | CATTTTGTTATCCCGCCTGTGGCTCCTCCTCTTGTGTaGTTAAGGAGGGAGGGGGTACAGCTGTGGCAGAGA | + |
Preference number: 3 (lower is better) Translates to: HFVIPPVAPPLV*LRREGVQLWQR Trigger: TCTCTGCCACAGCTGTACCCCCTCCCTCCTTAACCACACAAGAGGAGGAGCCACAGGCGGGATAACAAAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR CCA 72 bp | ATTCCCAGCAGACAGGGGTCTTCTGCCGCTGAAACCTaGCAGGAAGGAGGGATAAACACCACAGCAAGGATG | + |
Preference number: 3 (lower is better) Translates to: IPSRQGSSAAET*QEGGINTTARM Trigger: CATCCTTGCTGTGGTGTTTATCCCTCCTTCCTGCCAGGTTTCAGCGGCAGAAGACCCCTGTCTGCTGGGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR-3UTR CAA 90 bp | GTGGATGTAGCCACTCGGTGCTCCAGGTTCACACATCTCCCCCTCTATTTGGCTGCAGGACTTTTTCCTTaGGCTCTGGCTGAAGAGCCA | + |
Preference number: 3 (lower is better) Translates to: VDVATRCSRFTHLPLYLAAGLFP*ALAEEP Trigger: TGGCTCTTCAGCCAGAGCCAAAGGAAAAAGTCCTGC...AGCCAAATAGAGGGGGAGATGTGTGAACCTGGAGCACCGAGTGGCTACATCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR TCA 72 bp | CCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTaGCACACAGGAGGTAGAGGACAAGTTTCCATAAGG | + |
Preference number: 3 (lower is better) Translates to: PANGPQTRPDRM*HTGGRGQVSIR Trigger: CCTTATGGAAACTTGTCCTCTACCTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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3UTR TCA 72 bp | CTGAAACTGACAAGTGAGGGGCCAGGGATCCCCCACTaGCTGGATTGTGTCTGGGCACATCAACAAAGGCAA | + |
Preference number: 3 (lower is better) Translates to: LKLTSEGPGIPH*LDCVWAHQQRQ Trigger: TTGCCTTTGTTGATGTGCCCAGACACAATCCAGTCAGTGGGGGATCCCTGGCCCCTCACTTGTCAGTTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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3UTR TCA 72 bp | TCTATTTCCTTGGAATCCTCAGCCCCTGAGACAGGCTaGTTTCCTGTGAGCTCAAGGCCAGCCTGGTCTGCA | + |
Preference number: 3 (lower is better) Translates to: SISLESSAPETG*FPVSSRPAWSA Trigger: TGCAGACCAGGCTGGCCTTGAGCTCACAGGAAATCAGCCTGTCTCAGGGGCTGAGGATTCCAAGGAAATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR GCA 72 bp | CAACACCAGAAAGAGGCTGTGGATGTAGCCACTCGGTaGTCCAGGTTCACACATCTCCCCCTCTATTTGGCT | + |
Preference number: 3 (lower is better) Translates to: QHQKEAVDVATR*SRFTHLPLYLA Trigger: AGCCAAATAGAGGGGGAGATGTGTGAACCTGGAGCACCGAGTGGCTACATCCACAGCCTCTTTCTGGTGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR CCA 72 bp | TTCCAAAAGGCATTAGCATCCGGGCCGGCCTCCATCTaGGCAATTGTAAACACACCTCGGACAGCTTGGACA | + |
Preference number: 3 (lower is better) Translates to: FQKALASGPASI*AIVNTPRTAWT Trigger: TGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCCGGATGCTAATGCCTTTTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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3UTR-3UTR CAA 90 bp | CTCCTCTATGGAAACTCCATTCCCAGCAGACAGGGGTCTTCTGCCGCTGAAACCCACACCTCGGACAGCTaGGACACTTTGCTTTTAAAT | + |
Preference number: 3 (lower is better) Translates to: LLYGNSIPSRQGSSAAETHTSDS*DTLLLN Trigger: ATTTAAAAGCAAAGTGTCCAAGCTGTCCGAGGTGTG...GGTTTCAGCGGCAGAAGACCCCTGTCTGCTGGGAATGGAGTTTCCATAGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR-3UTR CAA 90 bp | CAGAAAGAGGCTGTGGATGTAGCCACTCGGTGCTCCAGGTTCACACATCTCCCCAACATTTGGTTCCGTTaGAGCTGTAATCAGCAGTTG | + |
Preference number: 3 (lower is better) Translates to: QKEAVDVATRCSRFTHLPNIWFR*SCNQQL Trigger: CAACTGCTGATTACAGCTCAAACGGAACCAAATGTT...GGGGAGATGTGTGAACCTGGAGCACCGAGTGGCTACATCCACAGCCTCTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR-3UTR CAA 90 bp | GAACACAGAGGAGTTGGTGACACTCACGATGAGCAGCAGCAGCAGATACAGGGACGCAGAAGCTGGTTATaGGTGACTACAAAGTACTTA | + |
Preference number: 3 (lower is better) Translates to: EHRGVGDTHDEQQQQIQGRRSWL*VTTKYL Trigger: TAAGTACTTTGTAGTCACCAATAACCAGCTTCTGCG...TCCCTGTATCTGCTGCTGCTGCTCATCGTGAGTGTCACCAACTCCTCTGTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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3UTR-3UTR CAA 90 bp | GGTGCTCCAGGTTCACACATCTCCCCCTCTATTTGGCTCATAGAGGCTAACTTGTCGCCTAATGATTTATaGTTCCCGTTGCACACATTC | + |
Preference number: 3 (lower is better) Translates to: GAPGSHISPSIWLIEANLSPNDL*FPLHTF Trigger: GAATGTGTGCAACGGGAACAATAAATCATTAGGCGA...CAAGTTAGCCTCTATGAGCCAAATAGAGGGGGAGATGTGTGAACCTGGAGCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR-3UTR CAA 90 bp | TTGCTAGTTGTTAAATCTGCATTTTGTTATCCCGCCTGTGGCTCCTCCTCTTGTTCCCTCTTGGGTGTCTaGAGTCAAAACAAGGCAGTC | + |
Preference number: 3 (lower is better) Translates to: LLVVKSAFCYPACGSSSCSLLGV*SQNKAV Trigger: GACTGCCTTGTTTTGACTCAAGACACCCAAGAGGGA...ACAAGAGGAGGAGCCACAGGCGGGATAACAAAATGCAGATTTAACAACTAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR TCA 72 bp | TTTAAATGCAGCAGGACTTTTTCCTTTGGCTCTGGCTaGAGAGCCACCTCCCTAGACTATTTAGGAGGAAGC | + |
Preference number: 3 (lower is better) Translates to: FKCSRTFSFGSG*RATSLDYLGGS Trigger: GCTTCCTCCTAAATAGTCTAGGGAGGTGGCTCTTCAGCCAGAGCCAAAGGAAAAAGTCCTGCTGCATTTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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3UTR TCA 72 bp | CGATGGAATTCCCAAACGATCCCACTGATATTTTTATaGGAAACACGACAGTCCCTCTTGGGTGTCTTGAGT | + |
Preference number: 3 (lower is better) Translates to: RWNSQTIPLIFL*ETRQSLLGVLS Trigger: ACTCAAGACACCCAAGAGGGACTGTCGTGTTTCTCATAAAAATATCAGTGGGATCGTTTGGGAATTCCATCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR TCA 72 bp | CAGACTAAAGCCGATGGAATTCCCAAACGATCCCACTaGTATTTTTATGAGAAACACGACAGTCCCTCTTGG | + |
Preference number: 3 (lower is better) Translates to: QTKADGIPKRSH*YFYEKHDSPSW Trigger: CCAAGAGGGACTGTCGTGTTTCTCATAAAAATATCAGTGGGATCGTTTGGGAATTCCATCGGCTTTAGTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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3UTR GCA 72 bp | AAACAAGGCAGTCGCCTAATGATTTATTGTTCCCGTTaGACACATTCTGTCTTCCAAAAGGCATTAGCATCC | + |
Preference number: 3 (lower is better) Translates to: KQGSRLMIYCSR*THSVFQKALAS Trigger: GGATGCTAATGCCTTTTGGAAGACAGAATGTGTGCAACGGGAACAATAAATCATTAGGCGACTGCCTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR GCA 90 bp | GGCTGGGCCTCTGCTTACCACTCAACCTCAGGCTTCTCGGATGGAGGCTCAGCCCCGAGGCGAAGAGGCTaGAGCGGAGGTCCGCAGCCA | + |
Preference number: 4 (lower is better) Translates to: GWASAYHSTSGFSDGGSAPRRRG*SGGPQP Trigger: TGGCTGCGGACCTCCGCTGCAGCCTCTTCGCCTCGG...GGCTGAGCCTCCATCCGAGAAGCCTGAGGTTGAGTGGTAAGCAGAGGCCCAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR GCA 90 bp | TCCGGGCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACACACGTCGCGGCTCGCTaGCTCCCTGGCTGCTGCCCT | + |
Preference number: 4 (lower is better) Translates to: SGPASIWAIVNTPRTAWTHVAAR*LPGCCP Trigger: AGGGCAGCAGCCAGGGAGGCAGCGAGCCGCGACGTG...TGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR GCA 90 bp | AAACTCGTCCTGTGCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGCCGAGGCGAAGAGGCTaGAGCGGAGGTCCGCAGCCA | + |
Preference number: 4 (lower is better) Translates to: KLVLCTPANGPQTRPDRMPRRRG*SGGPQP Trigger: TGGCTGCGGACCTCCGCTGCAGCCTCTTCGCCTCGG...CATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGCACAGGACGAGTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | GCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTGACACACAGGAGGGCTCGCTGCCTCCCTaGCTGCTGCCCTGTTGGAGA | + |
Preference number: 4 (lower is better) Translates to: APLQMVPRLDLTGCDTQEGSLPP*LLPCWR Trigger: TCTCCAACAGGGCAGCAGCCAGGGAGGCAGCGAGCC...CTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | TCCGGGCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACAGGCTCGCTGCCTCCCTaGCTGCTGCCCTGTTGGAGA | + |
Preference number: 4 (lower is better) Translates to: SGPASIWAIVNTPRTAWTGSLPP*LLPCWR Trigger: TCTCCAACAGGGCAGCAGCCAGGGAGGCAGCGAGCC...TGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | GCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTGACACACAGGAGGACAACCAGGAGAGCTaGCTCGAGGCCCTCTTGGGC | + |
Preference number: 4 (lower is better) Translates to: APLQMVPRLDLTGCDTQEDNQES*LEALLG Trigger: GCCCAAGAGGGCCTCGAGCCAGCTCTCCTGGTTGTC...CTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR TCA 90 bp | TCCGGGCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACACCCCCTCGCTGTGCTTaGTTCTTGCTCGGCTGCGGT | + |
Preference number: 4 (lower is better) Translates to: SGPASIWAIVNTPRTAWTPPRCA*FLLGCG Trigger: ACCGCAGCCGAGCAAGAATCAAGCACAGCGAGGGGG...TGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCCGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | CCAGAAAGAGGCTGTGGATGTAGCCACTCGGTGCTCCAGGTTCACACATCTCCCGGCTCGCTGCCTCCCTaGCTGCTGCCCTGTTGGAGA | + |
Preference number: 4 (lower is better) Translates to: PERGCGCSHSVLQVHTSPGSLPP*LLPCWR Trigger: TCTCCAACAGGGCAGCAGCCAGGGAGGCAGCGAGCC...GGGAGATGTGTGAACCTGGAGCACCGAGTGGCTACATCCACAGCCTCTTTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR TCA 90 bp | CAGAAAGAGGCTGTGGATGTAGCCACTCGGTGCTCCAGGTTCACACATCTCCCCCCCCCTCGCTGTGCTTaGTTCTTGCTCGGCTGCGGT | + |
Preference number: 4 (lower is better) Translates to: QKEAVDVATRCSRFTHLPPPRCA*FLLGCG Trigger: ACCGCAGCCGAGCAAGAATCAAGCACAGCGAGGGGG...GGGGAGATGTGTGAACCTGGAGCACCGAGTGGCTACATCCACAGCCTCTTTCTG 60% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR GCA 90 bp | TCCTGTGCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTGACACATGCCTCCCTGGCTGCTaGCCTGTTGGAGAGCTGCAT | + |
Preference number: 4 (lower is better) Translates to: SCAPLQMVPRLDLTGCDTCLPGC*PVGELH Trigger: ATGCAGCTCTCCAACAGGGCAGCAGCCAGGGAGGCA...TGTGTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGCACAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR GCA 90 bp | TCCGGGCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACATGCCTCCCTGGCTGCTaGCCTGTTGGAGAGCTGCAT | + |
Preference number: 4 (lower is better) Translates to: SGPASIWAIVNTPRTAWTCLPGC*PVGELH Trigger: ATGCAGCTCTCCAACAGGGCAGCAGCCAGGGAGGCA...TGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | GCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTGACACACAGGAGTCACGAACCAGTGGCTaGACAACCAGGAGAGCTGGC | + |
Preference number: 4 (lower is better) Translates to: APLQMVPRLDLTGCDTQESRTSG*TTRRAG Trigger: GCCAGCTCTCCTGGTTGTCCAGCCACTGGTTCGTGA...CTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR GCA 90 bp | AGAGGAGTTGGTGACACTCACGATGAGCAGCAGCAGCAGATACAGGGACATCATCCGAGGCGAAGAGGCTaGAGCGGAGGTCCGCAGCCA | + |
Preference number: 4 (lower is better) Translates to: RGVGDTHDEQQQQIQGHHPRRRG*SGGPQP Trigger: TGGCTGCGGACCTCCGCTGCAGCCTCTTCGCCTCGG...ATGATGTCCCTGTATCTGCTGCTGCTGCTCATCGTGAGTGTCACCAACTCCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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CDS-3UTR GCA 90 bp | GCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTGACACACAGGAGTCAAGTTGGGTAACCTaGCAGTGTCCGCAAGCAGGG | + |
Preference number: 4 (lower is better) Translates to: APLQMVPRLDLTGCDTQESSWVT*QCPQAG Trigger: CCCTGCTTGCGGACACTGGCAGGTTACCCAACTTGA...CTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | AAACTCGTCCTGTGCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGATAGGAAATCCGGGGTaGGGACAGGTGTGTGAGGGG | + |
Preference number: 4 (lower is better) Translates to: KLVLCTPANGPQTRPDRMIGNPG*GQVCEG Trigger: CCCCTCACACACCTGTCCCCACCCCGGATTTCCTAT...CATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGCACAGGACGAGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | CTCCTCTATGGAAACTCCATTCCCAGCAGACAGGGGTCTTCTGCCGCTGAAACCGACAACCAGGAGAGCTaGCTCGAGGCCCTCTTGGGC | + |
Preference number: 4 (lower is better) Translates to: LLYGNSIPSRQGSSAAETDNQES*LEALLG Trigger: GCCCAAGAGGGCCTCGAGCCAGCTCTCCTGGTTGTC...GGTTTCAGCGGCAGAAGACCCCTGTCTGCTGGGAATGGAGTTTCCATAGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR GCA 90 bp | CACACAGGAGGTAGAGGACAAGTTTCCATAAGGCACACGGTGAGTGGCCCCACTTGCCTCCCTGGCTGCTaGCCTGTTGGAGAGCTGCAT | + |
Preference number: 4 (lower is better) Translates to: HTGGRGQVSIRHTVSGPTCLPGC*PVGELH Trigger: ATGCAGCTCTCCAACAGGGCAGCAGCCAGGGAGGCA...AGTGGGGCCACTCACCGTGTGCCTTATGGAAACTTGTCCTCTACCTCCTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR GCA 90 bp | TCCGGGCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACAGGGGCGCCGGTCAGCTaGTGGATCTTTTCAAACTCT | + |
Preference number: 4 (lower is better) Translates to: SGPASIWAIVNTPRTAWTGAPVS*WIFSNS Trigger: AGAGTTTGAAAAGATCCAGCAGCTGACCGGCGCCCC...TGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR TCA 90 bp | TCGTCCTGTGCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTGACCATGAGGACTATAAATaGGGGCCAGGCTCAAGTCAC | + |
Preference number: 4 (lower is better) Translates to: SSCAPLQMVPRLDLTGCDHEDYK*GPGSSH Trigger: GTGACTTGAGCCTGGCCCTCATTTATAGTCCTCATG...GTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGCACAGGACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR GCA 90 bp | AGGCAGCTTTGTGGGAATGAGGACCCTGGTGAGCCTATGGCTTGGACCCTTCTCTCAAGTTGGGTAACCTaGCAGTGTCCGCAAGCAGGG | + |
Preference number: 4 (lower is better) Translates to: RQLCGNEDPGEPMAWTLLSSWVT*QCPQAG Trigger: CCCTGCTTGCGGACACTGGCAGGTTACCCAACTTGA...GAGAAGGGTCCAAGCCATAGGCTCACCAGGGTCCTCATTCCCACAAAGCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR GCA 90 bp | GCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACACTTTGGAGGCCCTCTTGGGCTaGTTCTGGGAATACACCAGC | + |
Preference number: 4 (lower is better) Translates to: AGLHLGNCKHTSDSLDTLEALLG*FWEYTS Trigger: GCTGGTGTATTCCCAGAAGCAGCCCAAGAGGGCCTC...CAAAGTGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR GCA 90 bp | CCCAGACTCGACCTGACCGGATGTGACACACAGGAGGTAGAGGACAAGTTTCCAGAGGCCCTCTTGGGCTaGTTCTGGGAATACACCAGC | + |
Preference number: 4 (lower is better) Translates to: PRLDLTGCDTQEVEDKFPEALLG*FWEYTS Trigger: GCTGGTGTATTCCCAGAAGCAGCCCAAGAGGGCCTC...TGGAAACTTGTCCTCTACCTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | CACACAGGAGGTAGAGGACAAGTTTCCATAAGGCACACGGTGAGTGGCCCCACTATAGGAAATCCGGGGTaGGGACAGGTGTGTGAGGGG | + |
Preference number: 4 (lower is better) Translates to: HTGGRGQVSIRHTVSGPTIGNPG*GQVCEG Trigger: CCCCTCACACACCTGTCCCCACCCCGGATTTCCTAT...AGTGGGGCCACTCACCGTGTGCCTTATGGAAACTTGTCCTCTACCTCCTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | CTCCTCTATGGAAACTCCATTCCCAGCAGACAGGGGTCTTCTGCCGCTGAAACCATAGGAAATCCGGGGTaGGGACAGGTGTGTGAGGGG | + |
Preference number: 4 (lower is better) Translates to: LLYGNSIPSRQGSSAAETIGNPG*GQVCEG Trigger: CCCCTCACACACCTGTCCCCACCCCGGATTTCCTAT...GGTTTCAGCGGCAGAAGACCCCTGTCTGCTGGGAATGGAGTTTCCATAGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CCA 90 bp | GGCTGCGGTCTATTTCCTTGGAATCCTCAGCCCCTGAGACAGGCTGATTTCCTGATAGGAAATCCGGGGTaGGGACAGGTGTGTGAGGGG | + |
Preference number: 4 (lower is better) Translates to: GCGLFPWNPQPLRQADFLIGNPG*GQVCEG Trigger: CCCCTCACACACCTGTCCCCACCCCGGATTTCCTAT...CAGGAAATCAGCCTGTCTCAGGGGCTGAGGATTCCAAGGAAATAGACCGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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CDS-3UTR CCA 90 bp | CACACAGGAGGTAGAGGACAAGTTTCCATAAGGCACACGGTGAGTGGCCCCACTTCACGAACCAGTGGCTaGACAACCAGGAGAGCTGGC | + |
Preference number: 4 (lower is better) Translates to: HTGGRGQVSIRHTVSGPTSRTSG*TTRRAG Trigger: GCCAGCTCTCCTGGTTGTCCAGCCACTGGTTCGTGA...AGTGGGGCCACTCACCGTGTGCCTTATGGAAACTTGTCCTCTACCTCCTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | CTGAAGAGCCACCTCCCTAGACTATTTAGGAGGAAGCAGAGGGTAGGACACCCCTCACGAACCAGTGGCTaGACAACCAGGAGAGCTGGC | + |
Preference number: 4 (lower is better) Translates to: LKSHLPRLFRRKQRVGHPSRTSG*TTRRAG Trigger: GCCAGCTCTCCTGGTTGTCCAGCCACTGGTTCGTGA...GGGGTGTCCTACCCTCTGCTTCCTCCTAAATAGTCTAGGGAGGTGGCTCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | TCCGGGCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACAATGATCACGAACCAGTaGCTGGACAACCAGGAGAGC | + |
Preference number: 4 (lower is better) Translates to: SGPASIWAIVNTPRTAWTMITNQ*LDNQES Trigger: GCTCTCCTGGTTGTCCAGCCACTGGTTCGTGATCAT...TGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR TCA 90 bp | CTGAAGAGCCACCTCCCTAGACTATTTAGGAGGAAGCAGAGGGTAGGACACCCCGGCTCAAGTCACTTGTaGGGTAGGTCCCCTCTCCAA | + |
Preference number: 4 (lower is better) Translates to: LKSHLPRLFRRKQRVGHPGSSHL*GRSPLQ Trigger: TTGGAGAGGGGACCTACCTCACAAGTGACTTGAGCC...GGGGTGTCCTACCCTCTGCTTCCTCCTAAATAGTCTAGGGAGGTGGCTCTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR TCA 90 bp | AGAAACACGACAGTCCCTCTTGGGTGTCTTGAGTCAAAACAAGGCAGTCGCCTACCCCCTCGCTGTGCTTaGTTCTTGCTCGGCTGCGGT | + |
Preference number: 4 (lower is better) Translates to: RNTTVPLGCLESKQGSRLPPRCA*FLLGCG Trigger: ACCGCAGCCGAGCAAGAATCAAGCACAGCGAGGGGG...TAGGCGACTGCCTTGTTTTGACTCAAGACACCCAAGAGGGACTGTCGTGTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CCA 90 bp | TTTTTCCTTTGGCTCTGGCTGAAGAGCCACCTCCCTAGACTATTTAGGAGGAAGGGCTCGCTGCCTCCCTaGCTGCTGCCCTGTTGGAGA | + |
Preference number: 4 (lower is better) Translates to: FFLWLWLKSHLPRLFRRKGSLPP*LLPCWR Trigger: TCTCCAACAGGGCAGCAGCCAGGGAGGCAGCGAGCC...CTTCCTCCTAAATAGTCTAGGGAGGTGGCTCTTCAGCCAGAGCCAAAGGAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR TCA 90 bp | AAACTCGTCCTGTGCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGGCAGGCCATTGTGAATaGTGGAGTGGAAGTTCTCTA | + |
Preference number: 4 (lower is better) Translates to: KLVLCTPANGPQTRPDRMAGHCE*WSGSSL Trigger: TAGAGAACTTCCACTCCATCATTCACAATGGCCTGC...CATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGCACAGGACGAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR TCA 90 bp | TCCGGGCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACAGCAGGCCATTGTGAATaGTGGAGTGGAAGTTCTCTA | + |
Preference number: 4 (lower is better) Translates to: SGPASIWAIVNTPRTAWTAGHCE*WSGSSL Trigger: TAGAGAACTTCCACTCCATCATTCACAATGGCCTGC...TGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR TCA 90 bp | ACTCCATTCCCAGCAGACAGGGGTCTTCTGCCGCTGAAACCTGGCAGGAAGGAGCACTTGACATCTGGATaGTCGATGACCTCACACACA | + |
Preference number: 4 (lower is better) Translates to: TPFPADRGLLPLKPGRKEHLTSG*SMTSHT Trigger: TGTGTGTGAGGTCATCGATCATCCAGATGTCAAGTG...CTCCTTCCTGCCAGGTTTCAGCGGCAGAAGACCCCTGTCTGCTGGGAATGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR TCA 90 bp | AAACTCGTCCTGTGCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGCACTTGACATCTGGATaGTCGATGACCTCACACACA | + |
Preference number: 4 (lower is better) Translates to: KLVLCTPANGPQTRPDRMHLTSG*SMTSHT Trigger: TGTGTGTGAGGTCATCGATCATCCAGATGTCAAGTG...CATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGCACAGGACGAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR GCA 90 bp | CACGATGAGCAGCAGCAGCAGATACAGGGACATCATGATCACGAACCAGTGGCTTCAAGTTGGGTAACCTaGCAGTGTCCGCAAGCAGGG | + |
Preference number: 4 (lower is better) Translates to: HDEQQQQIQGHHDHEPVASSWVT*QCPQAG Trigger: CCCTGCTTGCGGACACTGGCAGGTTACCCAACTTGA...AGCCACTGGTTCGTGATCATGATGTCCCTGTATCTGCTGCTGCTGCTCATCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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CDS-3UTR GCA 90 bp | ATAAACACCACAGCAAGGATGGCTGGGCCTCTGCTTACCACTCAACCTCAGGCTGGGGCGCCGGTCAGCTaGTGGATCTTTTCAAACTCT | + |
Preference number: 4 (lower is better) Translates to: INTTARMAGPLLTTQPQAGAPVS*WIFSNS Trigger: AGAGTTTGAAAAGATCCAGCAGCTGACCGGCGCCCC...AGCCTGAGGTTGAGTGGTAAGCAGAGGCCCAGCCATCCTTGCTGTGGTGTTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CCA 90 bp | GGCTGGGCCTCTGCTTACCACTCAACCTCAGGCTTCTCGGATGGAGGCTCAGCCGGATTGTCAGGATCTTaGAGGATAAAATCCAGCTCA | + |
Preference number: 4 (lower is better) Translates to: GWASAYHSTSGFSDGGSAGLSGS*RIKSSS Trigger: TGAGCTGGATTTTATCCTCCAAGATCCTGACAATCC...GGCTGAGCCTCCATCCGAGAAGCCTGAGGTTGAGTGGTAAGCAGAGGCCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CCA 90 bp | GAGGAAGCAGAGGGTAGGACACCCCTGAAACTGACAAGTGAGGGGCCAGGGATCCAAACTCTGCCTTCTTaGCACTGTGGATTGTCAGGA | + |
Preference number: 4 (lower is better) Translates to: EEAEGRTPLKLTSEGPGIQTLPS*HCGLSG Trigger: TCCTGACAATCCACAGTGCCAAGAAGGCAGAGTTTG...GATCCCTGGCCCCTCACTTGTCAGTTTCAGGGGTGTCCTACCCTCTGCTTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | GCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTGACACACAGGAGTTGGCACTTGACATCTaGATGATCGATGACCTCACA | + |
Preference number: 4 (lower is better) Translates to: APLQMVPRLDLTGCDTQELALDI*MIDDLT Trigger: TGTGAGGTCATCGATCATCCAGATGTCAAGTGCCAA...CTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | CTGAAGAGCCACCTCCCTAGACTATTTAGGAGGAAGCAGAGGGTAGGACACCCCCTCTTGGGCTGCTTCTaGGAATACACCAGCAGGTAC | + |
Preference number: 4 (lower is better) Translates to: LKSHLPRLFRRKQRVGHPLLGCF*EYTSRY Trigger: GTACCTGCTGGTGTATTCCCAGAAGCAGCCCAAGAG...GGGGTGTCCTACCCTCTGCTTCCTCCTAAATAGTCTAGGGAGGTGGCTCTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | CACACAGGAGGTAGAGGACAAGTTTCCATAAGGCACACGGTGAGTGGCCCCACTCTCTTGGGCTGCTTCTaGGAATACACCAGCAGGTAC | + |
Preference number: 4 (lower is better) Translates to: HTGGRGQVSIRHTVSGPTLLGCF*EYTSRY Trigger: GTACCTGCTGGTGTATTCCCAGAAGCAGCCCAAGAG...AGTGGGGCCACTCACCGTGTGCCTTATGGAAACTTGTCCTCTACCTCCTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR TCA 90 bp | CTGAAGAGCCACCTCCCTAGACTATTTAGGAGGAAGCAGAGGGTAGGACACCCCCATGAGGACTATAAATaGGGGCCAGGCTCAAGTCAC | + |
Preference number: 4 (lower is better) Translates to: LKSHLPRLFRRKQRVGHPHEDYK*GPGSSH Trigger: GTGACTTGAGCCTGGCCCTCATTTATAGTCCTCATG...GGGGTGTCCTACCCTCTGCTTCCTCCTAAATAGTCTAGGGAGGTGGCTCTTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR GCA 90 bp | TTTTTCCTTTGGCTCTGGCTGAAGAGCCACCTCCCTAGACTATTTAGGAGGAAGTGCCTCCCTGGCTGCTaGCCTGTTGGAGAGCTGCAT | + |
Preference number: 4 (lower is better) Translates to: FFLWLWLKSHLPRLFRRKCLPGC*PVGELH Trigger: ATGCAGCTCTCCAACAGGGCAGCAGCCAGGGAGGCA...CTTCCTCCTAAATAGTCTAGGGAGGTGGCTCTTCAGCCAGAGCCAAAGGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR GCA 90 bp | CTTGAGTCAAAACAAGGCAGTCGCCTAATGATTTATTGTTCCCGTTGCACACATCCGAGGCGAAGAGGCTaGAGCGGAGGTCCGCAGCCA | + |
Preference number: 4 (lower is better) Translates to: LESKQGSRLMIYCSRCTHPRRRG*SGGPQP Trigger: TGGCTGCGGACCTCCGCTGCAGCCTCTTCGCCTCGG...ATGTGTGCAACGGGAACAATAAATCATTAGGCGACTGCCTTGTTTTGACTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR GCA 90 bp | GCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTGACACACAGGAGGATCTTTTCAAACTCTaGCTTCTTGGCACTGTGGAT | + |
Preference number: 4 (lower is better) Translates to: APLQMVPRLDLTGCDTQEDLFKL*LLGTVD Trigger: ATCCACAGTGCCAAGAAGGCAGAGTTTGAAAAGATC...CTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | TCGTCCTGTGCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTGACCATAAAATCTGGAGTTaGCCGGGTCAAAGTACTCAA | + |
Preference number: 4 (lower is better) Translates to: SSCAPLQMVPRLDLTGCDHKIWS*PGQSTQ Trigger: TTGAGTACTTTGACCCGGCCAACTCCAGATTTTATG...GTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGCACAGGACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | AAACTCGTCCTGTGCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTGGTCTCATAAAATCTaGAGTTGGCCGGGTCAAAGT | + |
Preference number: 4 (lower is better) Translates to: KLVLCTPANGPQTRPDRMWSHKI*SWPGQS Trigger: ACTTTGACCCGGCCAACTCCAGATTTTATGAGACCA...CATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGCACAGGACGAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | GAGGAAGCAGAGGGTAGGACACCCCTGAAACTGACAAGTGAGGGGCCAGGGATCTTGGCACTTGACATCTaGATGATCGATGACCTCACA | + |
Preference number: 4 (lower is better) Translates to: EEAEGRTPLKLTSEGPGILALDI*MIDDLT Trigger: TGTGAGGTCATCGATCATCCAGATGTCAAGTGCCAA...GATCCCTGGCCCCTCACTTGTCAGTTTCAGGGGTGTCCTACCCTCTGCTTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | TCCGGGCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACATTCACCCGCAGAAGCTaGTTATTGGTGACTACAAAG | + |
Preference number: 4 (lower is better) Translates to: SGPASIWAIVNTPRTAWTFTRRS*LLVTTK Trigger: CTTTGTAGTCACCAATAACCAGCTTCTGCGGGTGAA...TGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR TCA 90 bp | CTGAAGAGCCACCTCCCTAGACTATTTAGGAGGAAGCAGAGGGTAGGACACCCCCACTTGACATCTGGATaGTCGATGACCTCACACACA | + |
Preference number: 4 (lower is better) Translates to: LKSHLPRLFRRKQRVGHPHLTSG*SMTSHT Trigger: TGTGTGTGAGGTCATCGATCATCCAGATGTCAAGTG...GGGGTGTCCTACCCTCTGCTTCCTCCTAAATAGTCTAGGGAGGTGGCTCTTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR GCA 90 bp | TCCTGTGCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTGACACAGATCTTTTCAAACTCTaGCTTCTTGGCACTGTGGAT | + |
Preference number: 4 (lower is better) Translates to: SCAPLQMVPRLDLTGCDTDLFKL*LLGTVD Trigger: ATCCACAGTGCCAAGAAGGCAGAGTTTGAAAAGATC...TGTGTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGCACAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | GTGGATGTAGCCACTCGGTGCTCCAGGTTCACACATCTCCCCCTCTATTTGGCTCAAACTCTGCCTTCTTaGCACTGTGGATTGTCAGGA | + |
Preference number: 4 (lower is better) Translates to: VDVATRCSRFTHLPLYLAQTLPS*HCGLSG Trigger: TCCTGACAATCCACAGTGCCAAGAAGGCAGAGTTTG...AGCCAAATAGAGGGGGAGATGTGTGAACCTGGAGCACCGAGTGGCTACATCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CCA 90 bp | TCCGGGCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACACATAAAATCTGGAGTTaGCCGGGTCAAAGTACTCAA | + |
Preference number: 4 (lower is better) Translates to: SGPASIWAIVNTPRTAWTHKIWS*PGQSTQ Trigger: TTGAGTACTTTGACCCGGCCAACTCCAGATTTTATG...TGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCCGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | CCAGAAAGAGGCTGTGGATGTAGCCACTCGGTGCTCCAGGTTCACACATCTCCCTGGTCTCATAAAATCTaGAGTTGGCCGGGTCAAAGT | + |
Preference number: 4 (lower is better) Translates to: PERGCGCSHSVLQVHTSPWSHKI*SWPGQS Trigger: ACTTTGACCCGGCCAACTCCAGATTTTATGAGACCA...GGGAGATGTGTGAACCTGGAGCACCGAGTGGCTACATCCACAGCCTCTTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CCA 90 bp | AGGCAGCTTTGTGGGAATGAGGACCCTGGTGAGCCTATGGCTTGGACCCTTCTCTTGGCACTTGACATCTaGATGATCGATGACCTCACA | + |
Preference number: 4 (lower is better) Translates to: RQLCGNEDPGEPMAWTLLLALDI*MIDDLT Trigger: TGTGAGGTCATCGATCATCCAGATGTCAAGTGCCAA...GAGAAGGGTCCAAGCCATAGGCTCACCAGGGTCCTCATTCCCACAAAGCTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CCA 90 bp | TTCTCCATAACAACACCAGAAAGAGGCTGTGGATGTAGCCACTCGGTGCTCCAGCTCTTGGGCTGCTTCTaGGAATACACCAGCAGGTAC | + |
Preference number: 4 (lower is better) Translates to: FSITTPERGCGCSHSVLQLLGCF*EYTSRY Trigger: GTACCTGCTGGTGTATTCCCAGAAGCAGCCCAAGAG...CTGGAGCACCGAGTGGCTACATCCACAGCCTCTTTCTGGTGTTGTTATGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CCA 90 bp | GGTGCTCCAGGTTCACACATCTCCCCCTCTATTTGGCTCATAGAGGCTAACTTGATGATCACGAACCAGTaGCTGGACAACCAGGAGAGC | + |
Preference number: 4 (lower is better) Translates to: GAPGSHISPSIWLIEANLMITNQ*LDNQES Trigger: GCTCTCCTGGTTGTCCAGCCACTGGTTCGTGATCAT...CAAGTTAGCCTCTATGAGCCAAATAGAGGGGGAGATGTGTGAACCTGGAGCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CCA 90 bp | CAGCAGCAGCAGATACAGGGACATCATGATCACGAACCAGTGGCTGGACAACCACAAACTCTGCCTTCTTaGCACTGTGGATTGTCAGGA | + |
Preference number: 4 (lower is better) Translates to: QQQQIQGHHDHEPVAGQPQTLPS*HCGLSG Trigger: TCCTGACAATCCACAGTGCCAAGAAGGCAGAGTTTG...TGGTTGTCCAGCCACTGGTTCGTGATCATGATGTCCCTGTATCTGCTGCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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CDS-3UTR CCA 90 bp | GCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACACTTTGTTGGCACTTGACATCTaGATGATCGATGACCTCACA | + |
Preference number: 4 (lower is better) Translates to: AGLHLGNCKHTSDSLDTLLALDI*MIDDLT Trigger: TGTGAGGTCATCGATCATCCAGATGTCAAGTGCCAA...CAAAGTGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | CTCCTCTATGGAAACTCCATTCCCAGCAGACAGGGGTCTTCTGCCGCTGAAACCTTCACCCGCAGAAGCTaGTTATTGGTGACTACAAAG | + |
Preference number: 4 (lower is better) Translates to: LLYGNSIPSRQGSSAAETFTRRS*LLVTTK Trigger: CTTTGTAGTCACCAATAACCAGCTTCTGCGGGTGAA...GGTTTCAGCGGCAGAAGACCCCTGTCTGCTGGGAATGGAGTTTCCATAGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CCA 90 bp | TCAAAACAAGGCAGTCGCCTAATGATTTATTGTTCCCGTTGCACACATTCTGTCGACAACCAGGAGAGCTaGCTCGAGGCCCTCTTGGGC | + |
Preference number: 4 (lower is better) Translates to: SKQGSRLMIYCSRCTHSVDNQES*LEALLG Trigger: GCCCAAGAGGGCCTCGAGCCAGCTCTCCTGGTTGTC...GACAGAATGTGTGCAACGGGAACAATAAATCATTAGGCGACTGCCTTGTTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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3UTR CAA 72 bp | TTCACACGATTCCAGAAGTGGTGGAACACAGAGGAGTaGGTGACACTCACGATGAGCAGCAGCAGCAGATAC | + |
Preference number: 4 (lower is better) Translates to: FTRFQKWWNTEE*VTLTMSSSSRY Trigger: GTATCTGCTGCTGCTGCTCATCGTGAGTGTCACCAACTCCTCTGTGTTCCACCACTTCTGGAATCGTGTGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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CDS-3UTR TCA 90 bp | GGTGCTCCAGGTTCACACATCTCCCCCTCTATTTGGCTCATAGAGGCTAACTTGGCAGGCCATTGTGAATaGTGGAGTGGAAGTTCTCTA | + |
Preference number: 4 (lower is better) Translates to: GAPGSHISPSIWLIEANLAGHCE*WSGSSL Trigger: TAGAGAACTTCCACTCCATCATTCACAATGGCCTGC...CAAGTTAGCCTCTATGAGCCAAATAGAGGGGGAGATGTGTGAACCTGGAGCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR GCA 90 bp | GTCCCCAGACTCGACCTGACCGGATGTGACACACAGGAGGTAGAGGACAAGTTTGATCTTTTCAAACTCTaGCTTCTTGGCACTGTGGAT | + |
Preference number: 4 (lower is better) Translates to: VPRLDLTGCDTQEVEDKFDLFKL*LLGTVD Trigger: ATCCACAGTGCCAAGAAGGCAGAGTTTGAAAAGATC...AAACTTGTCCTCTACCTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR GCA 90 bp | GCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACACTTTGGATCTTTTCAAACTCTaGCTTCTTGGCACTGTGGAT | + |
Preference number: 4 (lower is better) Translates to: AGLHLGNCKHTSDSLDTLDLFKL*LLGTVD Trigger: ATCCACAGTGCCAAGAAGGCAGAGTTTGAAAAGATC...CAAAGTGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | CCCAGACTCGACCTGACCGGATGTGACACACAGGAGGTAGAGGACAAGTTTCCAGTTTGTCTGTGTCTCTaGAAGACTGTAGAAGTTCCT | + |
Preference number: 4 (lower is better) Translates to: PRLDLTGCDTQEVEDKFPVCLCL*KTVEVP Trigger: AGGAACTTCTACAGTCTTCCAGAGACACAGACAAAC...TGGAAACTTGTCCTCTACCTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | CACACAGGAGGTAGAGGACAAGTTTCCATAAGGCACACGGTGAGTGGCCCCACTGGATTGTCAGGATCTTaGAGGATAAAATCCAGCTCA | + |
Preference number: 4 (lower is better) Translates to: HTGGRGQVSIRHTVSGPTGLSGS*RIKSSS Trigger: TGAGCTGGATTTTATCCTCCAAGATCCTGACAATCC...AGTGGGGCCACTCACCGTGTGCCTTATGGAAACTTGTCCTCTACCTCCTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
||
CDS-3UTR CCA 90 bp | CACACAGGAGGTAGAGGACAAGTTTCCATAAGGCACACGGTGAGTGGCCCCACTCATAAAATCTGGAGTTaGCCGGGTCAAAGTACTCAA | + |
Preference number: 4 (lower is better) Translates to: HTGGRGQVSIRHTVSGPTHKIWS*PGQSTQ Trigger: TTGAGTACTTTGACCCGGCCAACTCCAGATTTTATG...AGTGGGGCCACTCACCGTGTGCCTTATGGAAACTTGTCCTCTACCTCCTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | ATAAACACCACAGCAAGGATGGCTGGGCCTCTGCTTACCACTCAACCTCAGGCTTGGTCTCATAAAATCTaGAGTTGGCCGGGTCAAAGT | + |
Preference number: 4 (lower is better) Translates to: INTTARMAGPLLTTQPQAWSHKI*SWPGQS Trigger: ACTTTGACCCGGCCAACTCCAGATTTTATGAGACCA...AGCCTGAGGTTGAGTGGTAAGCAGAGGCCCAGCCATCCTTGCTGTGGTGTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CCA 90 bp | CACGATGAGCAGCAGCAGCAGATACAGGGACATCATGATCACGAACCAGTGGCTTGGTCTCATAAAATCTaGAGTTGGCCGGGTCAAAGT | + |
Preference number: 4 (lower is better) Translates to: HDEQQQQIQGHHDHEPVAWSHKI*SWPGQS Trigger: ACTTTGACCCGGCCAACTCCAGATTTTATGAGACCA...AGCCACTGGTTCGTGATCATGATGTCCCTGTATCTGCTGCTGCTGCTCATCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
||
CDS-3UTR TCA 90 bp | CAGGACTTTTTCCTTTGGCTCTGGCTGAAGAGCCACCTCCCTAGACTATTTAGGGCAGGCCATTGTGAATaGTGGAGTGGAAGTTCTCTA | + |
Preference number: 4 (lower is better) Translates to: QDFFLWLWLKSHLPRLFRAGHCE*WSGSSL Trigger: TAGAGAACTTCCACTCCATCATTCACAATGGCCTGC...CCTAAATAGTCTAGGGAGGTGGCTCTTCAGCCAGAGCCAAAGGAAAAAGTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR TCA 90 bp | TTTTTCCTTTGGCTCTGGCTGAAGAGCCACCTCCCTAGACTATTTAGGAGGAAGCATGAGGACTATAAATaGGGGCCAGGCTCAAGTCAC | + |
Preference number: 4 (lower is better) Translates to: FFLWLWLKSHLPRLFRRKHEDYK*GPGSSH Trigger: GTGACTTGAGCCTGGCCCTCATTTATAGTCCTCATG...CTTCCTCCTAAATAGTCTAGGGAGGTGGCTCTTCAGCCAGAGCCAAAGGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR GCA 90 bp | GAGTCAAAACAAGGCAGTCGCCTAATGATTTATTGTTCCCGTTGCACACATTCTGAGGCCCTCTTGGGCTaGTTCTGGGAATACACCAGC | + |
Preference number: 4 (lower is better) Translates to: ESKQGSRLMIYCSRCTHSEALLG*FWEYTS Trigger: GCTGGTGTATTCCCAGAAGCAGCCCAAGAGGGCCTC...AGAATGTGTGCAACGGGAACAATAAATCATTAGGCGACTGCCTTGTTTTGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR GCA 90 bp | GAGTCAAAACAAGGCAGTCGCCTAATGATTTATTGTTCCCGTTGCACACATTCTGGGGCGCCGGTCAGCTaGTGGATCTTTTCAAACTCT | + |
Preference number: 4 (lower is better) Translates to: ESKQGSRLMIYCSRCTHSGAPVS*WIFSNS Trigger: AGAGTTTGAAAAGATCCAGCAGCTGACCGGCGCCCC...AGAATGTGTGCAACGGGAACAATAAATCATTAGGCGACTGCCTTGTTTTGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 |
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CDS-3UTR CCA 90 bp | TTTTTCCTTTGGCTCTGGCTGAAGAGCCACCTCCCTAGACTATTTAGGAGGAAGCATAAAATCTGGAGTTaGCCGGGTCAAAGTACTCAA | + |
Preference number: 4 (lower is better) Translates to: FFLWLWLKSHLPRLFRRKHKIWS*PGQSTQ Trigger: TTGAGTACTTTGACCCGGCCAACTCCAGATTTTATG...CTTCCTCCTAAATAGTCTAGGGAGGTGGCTCTTCAGCCAGAGCCAAAGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | CTTGAGTCAAAACAAGGCAGTCGCCTAATGATTTATTGTTCCCGTTGCACACATCAAACTCTGCCTTCTTaGCACTGTGGATTGTCAGGA | + |
Preference number: 4 (lower is better) Translates to: LESKQGSRLMIYCSRCTHQTLPS*HCGLSG Trigger: TCCTGACAATCCACAGTGCCAAGAAGGCAGAGTTTG...ATGTGTGCAACGGGAACAATAAATCATTAGGCGACTGCCTTGTTTTGACTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
||
CDS-3UTR CCA 90 bp | GAGTCAAAACAAGGCAGTCGCCTAATGATTTATTGTTCCCGTTGCACACATTCTGGATTGTCAGGATCTTaGAGGATAAAATCCAGCTCA | + |
Preference number: 4 (lower is better) Translates to: ESKQGSRLMIYCSRCTHSGLSGS*RIKSSS Trigger: TGAGCTGGATTTTATCCTCCAAGATCCTGACAATCC...AGAATGTGTGCAACGGGAACAATAAATCATTAGGCGACTGCCTTGTTTTGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 |
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3UTR CAA 72 bp | AAAACAAGGCAGTCGCCTAATGATTTATTGTTCCCGTaGCACACATTCTGTCTTCCAAAAGGCATTAGCATC | + |
Preference number: 4 (lower is better) Translates to: KTRQSPNDLLFP*HTFCLPKGISI Trigger: GATGCTAATGCCTTTTGGAAGACAGAATGTGTGCAACGGGAACAATAAATCATTAGGCGACTGCCTTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CCA 90 bp | AGACTAAAGCCGATGGAATTCCCAAACGATCCCACTGATATTTTTATGAGAAACTTCACCCGCAGAAGCTaGTTATTGGTGACTACAAAG | + |
Preference number: 4 (lower is better) Translates to: RLKPMEFPNDPTDIFMRNFTRRS*LLVTTK Trigger: CTTTGTAGTCACCAATAACCAGCTTCTGCGGGTGAA...GTTTCTCATAAAAATATCAGTGGGATCGTTTGGGAATTCCATCGGCTTTAGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CCA 90 bp | AGACTAAAGCCGATGGAATTCCCAAACGATCCCACTGATATTTTTATGAGAAACGGATTGTCAGGATCTTaGAGGATAAAATCCAGCTCA | + |
Preference number: 4 (lower is better) Translates to: RLKPMEFPNDPTDIFMRNGLSGS*RIKSSS Trigger: TGAGCTGGATTTTATCCTCCAAGATCCTGACAATCC...GTTTCTCATAAAAATATCAGTGGGATCGTTTGGGAATTCCATCGGCTTTAGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS GCA 90 bp | GCACCGAGTCCCGCTTGTAGCTCTGCAGCGCCGAGGCGAAGAGGCTaGAGCGGAGGTCCGCAGCCAGCACGTCGCGGCTCGCTGCCTCCC | + |
Preference number: 5 (lower is better) Translates to: APSPACSSAAPRRRG*SGGPQPARRGSLPP Trigger: GGGAGGCAGCGAGCCGCGACGTGCTGGCTGCGGACCTCCGCTGCAGCCTCTTCGCCTCGGCGCTGCAGAGCTACAAGCGGGACTCGGTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | CCAGAAAGAGGCTGTGGATGTAGCCACTCGGTGCTCCAGGTTCACACATCTCCCTGGCTCGAGGCCCTCTaGGGCTGCTTCTGGGAATAC | + |
Preference number: 5 (lower is better) Translates to: PERGCGCSHSVLQVHTSPWLEAL*GCFWEY Trigger: GTATTCCCAGAAGCAGCCCAAGAGGGCCTCGAGCCA...GGGAGATGTGTGAACCTGGAGCACCGAGTGGCTACATCCACAGCCTCTTTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CAA 90 bp | GTCCCCAGACTCGACCTGACCGGATGTGACACACAGGAGGTAGAGGACAAGTTTTGGCTCGAGGCCCTCTaGGGCTGCTTCTGGGAATAC | + |
Preference number: 5 (lower is better) Translates to: VPRLDLTGCDTQEVEDKFWLEAL*GCFWEY Trigger: GTATTCCCAGAAGCAGCCCAAGAGGGCCTCGAGCCA...AAACTTGTCCTCTACCTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | CCCAGACTCGACCTGACCGGATGTGACACACAGGAGGTAGAGGACAAGTTTCCATGGCTCGAGGCCCTCTaGGGCTGCTTCTGGGAATAC | + |
Preference number: 5 (lower is better) Translates to: PRLDLTGCDTQEVEDKFPWLEAL*GCFWEY Trigger: GTATTCCCAGAAGCAGCCCAAGAGGGCCTCGAGCCA...TGGAAACTTGTCCTCTACCTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | TCCGGGCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACACCAAACAGAGAAGTCTaGTTCAGGTGGCAGTGCAGG | + |
Preference number: 5 (lower is better) Translates to: SGPASIWAIVNTPRTAWTPNREV*FRWQCR Trigger: CCTGCACTGCCACCTGAACAAGACTTCTCTGTTTGG...TGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | TCCTGTGCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTGACACACCAAACAGAGAAGTCTaGTTCAGGTGGCAGTGCAGG | + |
Preference number: 5 (lower is better) Translates to: SCAPLQMVPRLDLTGCDTPNREV*FRWQCR Trigger: CCTGCACTGCCACCTGAACAAGACTTCTCTGTTTGG...TGTGTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGCACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | CCCAGACTCGACCTGACCGGATGTGACACACAGGAGGTAGAGGACAAGTTTCCAAGGTCCCAGGCCTGTTaGTCTGTGTCTCTGGAAGAC | + |
Preference number: 5 (lower is better) Translates to: PRLDLTGCDTQEVEDKFPRSQAC*SVSLED Trigger: GTCTTCCAGAGACACAGACAAACAGGCCTGGGACCT...TGGAAACTTGTCCTCTACCTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | CACACAGGAGGTAGAGGACAAGTTTCCATAAGGCACACGGTGAGTGGCCCCACTAGGTCCCAGGCCTGTTaGTCTGTGTCTCTGGAAGAC | + |
Preference number: 5 (lower is better) Translates to: HTGGRGQVSIRHTVSGPTRSQAC*SVSLED Trigger: GTCTTCCAGAGACACAGACAAACAGGCCTGGGACCT...AGTGGGGCCACTCACCGTGTGCCTTATGGAAACTTGTCCTCTACCTCCTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | GTCCCCAGACTCGACCTGACCGGATGTGACACACAGGAGGTAGAGGACAAGTTTAGGTCCCAGGCCTGTTaGTCTGTGTCTCTGGAAGAC | + |
Preference number: 5 (lower is better) Translates to: VPRLDLTGCDTQEVEDKFRSQAC*SVSLED Trigger: GTCTTCCAGAGACACAGACAAACAGGCCTGGGACCT...AAACTTGTCCTCTACCTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | TCCTGTGCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTGACACATCAAACTCTGCCTTCTaGGCACTGTGGATTGTCAGG | + |
Preference number: 5 (lower is better) Translates to: SCAPLQMVPRLDLTGCDTSNSAF*ALWIVR Trigger: CCTGACAATCCACAGTGCCAAGAAGGCAGAGTTTGA...TGTGTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGCACAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS GCA 90 bp | CTGTGTCTCTGGAAGACTGTAGAAGTTCCTTCAAGTTGGGTAACCTaGCAGTGTCCGCAAGCAGGGCCTCGAAGTCCTTACAGTCGTGGC | + |
Preference number: 5 (lower is better) Translates to: LCLWKTVEVPSSWVT*QCPQAGPRSPYSRG Trigger: GCCACGACTGTAAGGACTTCGAGGCCCTGCTTGCGGACACTGGCAGGTTACCCAACTTGAAGGAACTTCTACAGTCTTCCAGAGACACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CCA 90 bp | AGTTGGCCGGGTCAAAGTACTCAATTTCAAATAGGAAATCCGGGGTaGGGACAGGTGTGTGAGGGGCGCCGGTCAGCTGCTGGATCTTTT | + |
Preference number: 5 (lower is better) Translates to: SWPGQSTQFQIGNPG*GQVCEGRRSAAGSF Trigger: AAAAGATCCAGCAGCTGACCGGCGCCCCTCACACACCTGTCCCCACCCCGGATTTCCTATTTGAAATTGAGTACTTTGACCCGGCCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | ACTCCATTCCCAGCAGACAGGGGTCTTCTGCCGCTGAAACCTGGCAGGAAGGAGTCTTGGCACTGTGGATaGTCAGGATCTTGGAGGATA | + |
Preference number: 5 (lower is better) Translates to: TPFPADRGLLPLKPGRKESWHCG*SGSWRI Trigger: TATCCTCCAAGATCCTGACAATCCACAGTGCCAAGA...CTCCTTCCTGCCAGGTTTCAGCGGCAGAAGACCCCTGTCTGCTGGGAATGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CAA 90 bp | TCCGGGCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACATCTTGGCACTGTGGATaGTCAGGATCTTGGAGGATA | + |
Preference number: 5 (lower is better) Translates to: SGPASIWAIVNTPRTAWTSWHCG*SGSWRI Trigger: TATCCTCCAAGATCCTGACAATCCACAGTGCCAAGA...TGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGCCCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | GAGGAAGCAGAGGGTAGGACACCCCTGAAACTGACAAGTGAGGGGCCAGGGATCTCTTGGCACTGTGGATaGTCAGGATCTTGGAGGATA | + |
Preference number: 5 (lower is better) Translates to: EEAEGRTPLKLTSEGPGISWHCG*SGSWRI Trigger: TATCCTCCAAGATCCTGACAATCCACAGTGCCAAGA...GATCCCTGGCCCCTCACTTGTCAGTTTCAGGGGTGTCCTACCCTCTGCTTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | CTCCTCTATGGAAACTCCATTCCCAGCAGACAGGGGTCTTCTGCCGCTGAAACCCCAAACAGAGAAGTCTaGTTCAGGTGGCAGTGCAGG | + |
Preference number: 5 (lower is better) Translates to: LLYGNSIPSRQGSSAAETPNREV*FRWQCR Trigger: CCTGCACTGCCACCTGAACAAGACTTCTCTGTTTGG...GGTTTCAGCGGCAGAAGACCCCTGTCTGCTGGGAATGGAGTTTCCATAGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CAA 90 bp | CTGAAGAGCCACCTCCCTAGACTATTTAGGAGGAAGCAGAGGGTAGGACACCCCTCAAACTCTGCCTTCTaGGCACTGTGGATTGTCAGG | + |
Preference number: 5 (lower is better) Translates to: LKSHLPRLFRRKQRVGHPSNSAF*ALWIVR Trigger: CCTGACAATCCACAGTGCCAAGAAGGCAGAGTTTGA...GGGGTGTCCTACCCTCTGCTTCCTCCTAAATAGTCTAGGGAGGTGGCTCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | GTCCCCAGACTCGACCTGACCGGATGTGACACACAGGAGGTAGAGGACAAGTTTTCAAACTCTGCCTTCTaGGCACTGTGGATTGTCAGG | + |
Preference number: 5 (lower is better) Translates to: VPRLDLTGCDTQEVEDKFSNSAF*ALWIVR Trigger: CCTGACAATCCACAGTGCCAAGAAGGCAGAGTTTGA...AAACTTGTCCTCTACCTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | CACACAGGAGGTAGAGGACAAGTTTCCATAAGGCACACGGTGAGTGGCCCCACTTCAAACTCTGCCTTCTaGGCACTGTGGATTGTCAGG | + |
Preference number: 5 (lower is better) Translates to: HTGGRGQVSIRHTVSGPTSNSAF*ALWIVR Trigger: CCTGACAATCCACAGTGCCAAGAAGGCAGAGTTTGA...AGTGGGGCCACTCACCGTGTGCCTTATGGAAACTTGTCCTCTACCTCCTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | GAGGAAGCAGAGGGTAGGACACCCCTGAAACTGACAAGTGAGGGGCCAGGGATCTCCCTTCTTCTTGATTaGGCACTTGACATCTGGATG | + |
Preference number: 5 (lower is better) Translates to: EEAEGRTPLKLTSEGPGISLLLD*ALDIWM Trigger: CATCCAGATGTCAAGTGCCAAATCAAGAAGAAGGGA...GATCCCTGGCCCCTCACTTGTCAGTTTCAGGGGTGTCCTACCCTCTGCTTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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CDS TCA 90 bp | GTGAGACTCTGTCCCTTCTTCTTGATTTGGCACTTGACATCTGGATaGTCGATGACCTCACACACAGCTACGCAGCTCAGGATCGGGCCA | + |
Preference number: 5 (lower is better) Translates to: VRLCPFFLIWHLTSG*SMTSHTATQLRIGP Trigger: TGGCCCGATCCTGAGCTGCGTAGCTGTGTGTGAGGTCATCGATCATCCAGATGTCAAGTGCCAAATCAAGAAGAAGGGACAGAGTCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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CDS CCA 90 bp | CCTGTTTGTCTGTGTCTCTGGAAGACTGTAGAAGTTCCTTCAAGTTaGGTAACCTGCCAGTGTCCGCAAGCAGGGCCTCGAAGTCCTTAC | + |
Preference number: 5 (lower is better) Translates to: PVCLCLWKTVEVPSS*VTCQCPQAGPRSPY Trigger: GTAAGGACTTCGAGGCCCTGCTTGCGGACACTGGCAGGTTACCCAACTTGAAGGAACTTCTACAGTCTTCCAGAGACACAGACAAACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | TGCTTCTGGGAATACACCAGCAGGTACTTCACCCGCAGAAGCTGGTTATTGGTGCCAAACAGAGAAGTCTaGTTCAGGTGGCAGTGCAGG | + |
Preference number: 5 (lower is better) Translates to: CFWEYTSRYFTRRSWLLVPNREV*FRWQCR Trigger: CCTGCACTGCCACCTGAACAAGACTTCTCTGTTTGG...CACCAATAACCAGCTTCTGCGGGTGAAGTACCTGCTGGTGTATTCCCAGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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CDS-3UTR CAA 90 bp | TCCTGTGCACCCCTGCAAATGGTCCCCAGACTCGACCTGACCGGATGTGACACAATCCTTCTTCTTGATTaGGCACTTGACATCTGGATG | + |
Preference number: 5 (lower is better) Translates to: SCAPLQMVPRLDLTGCDTILLLD*ALDIWM Trigger: CATCCAGATGTCAAGTGCCAAATCAAGAAGAAGGAT...TGTGTCACATCCGGTCAGGTCGAGTCTGGGGACCATTTGCAGGGGTGCACAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS TCA 90 bp | CAAACAGAGAAGTCTTGTTCAGGTGGCAGTGCAGGCCATTGTGAATaGTGGAGTGGAAGTTCTCTAGGCGGCTACCATGGAAGGCATAGA | + |
Preference number: 5 (lower is better) Translates to: QTEKSCSGGSAGHCE*WSGSSLGGYHGRHR Trigger: TCTATGCCTTCCATGGTAGCCGCCTAGAGAACTTCCACTCCATCATTCACAATGGCCTGCACTGCCACCTGAACAAGACTTCTCTGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CCA 90 bp | CATAGTGAGACTCTGTCCCTTCTTCTTGATTTGGCACTTGACATCTaGATGATCGATGACCTCACACACAGCTACGCAGCTCAGGATCGG | + |
Preference number: 5 (lower is better) Translates to: HSETLSLLLDLALDI*MIDDLTHSYAAQDR Trigger: CCGATCCTGAGCTGCGTAGCTGTGTGTGAGGTCATCGATCATCCAGATGTCAAGTGCCAAATCAAGAAGAAGGGACAGAGTCTCACTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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CDS-3UTR CAA 90 bp | TTCTCCATAACAACACCAGAAAGAGGCTGTGGATGTAGCCACTCGGTGCTCCAGTCTTGGCACTGTGGATaGTCAGGATCTTGGAGGATA | + |
Preference number: 5 (lower is better) Translates to: FSITTPERGCGCSHSVLQSWHCG*SGSWRI Trigger: TATCCTCCAAGATCCTGACAATCCACAGTGCCAAGA...CTGGAGCACCGAGTGGCTACATCCACAGCCTCTTTCTGGTGTTGTTATGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CAA 90 bp | GTCCCCAGACTCGACCTGACCGGATGTGACACACAGGAGGTAGAGGACAAGTTTATCCTTCTTCTTGATTaGGCACTTGACATCTGGATG | + |
Preference number: 5 (lower is better) Translates to: VPRLDLTGCDTQEVEDKFILLLD*ALDIWM Trigger: CATCCAGATGTCAAGTGCCAAATCAAGAAGAAGGAT...AAACTTGTCCTCTACCTCCTGTGTGTCACATCCGGTCAGGTCGAGTCTGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | CTCCTCTATGGAAACTCCATTCCCAGCAGACAGGGGTCTTCTGCCGCTGAAACCATCCTTCTTCTTGATTaGGCACTTGACATCTGGATG | + |
Preference number: 5 (lower is better) Translates to: LLYGNSIPSRQGSSAAETILLLD*ALDIWM Trigger: CATCCAGATGTCAAGTGCCAAATCAAGAAGAAGGAT...GGTTTCAGCGGCAGAAGACCCCTGTCTGCTGGGAATGGAGTTTCCATAGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CAA 90 bp | GCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACACTTTGCTGCGGTCTATTTCCTaGGAATCCTTCTTCTTGATT | + |
Preference number: 5 (lower is better) Translates to: AGLHLGNCKHTSDSLDTLLRSIS*ESFFLI Trigger: AATCAAGAAGAAGGATTCCAAGGAAATAGACCGCAG...CAAAGTGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | CACACAGGAGGTAGAGGACAAGTTTCCATAAGGCACACGGTGAGTGGCCCCACTCTGCGGTCTATTTCCTaGGAATCCTTCTTCTTGATT | + |
Preference number: 5 (lower is better) Translates to: HTGGRGQVSIRHTVSGPTLRSIS*ESFFLI Trigger: AATCAAGAAGAAGGATTCCAAGGAAATAGACCGCAG...AGTGGGGCCACTCACCGTGTGCCTTATGGAAACTTGTCCTCTACCTCCTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | GCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACACTTTGCGCAGAAGCTGGTTATaGGTGACTACAAAGTACTTA | + |
Preference number: 5 (lower is better) Translates to: AGLHLGNCKHTSDSLDTLRRSWL*VTTKYL Trigger: TAAGTACTTTGTAGTCACCAATAACCAGCTTCTGCG...CAAAGTGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS TCA 90 bp | ATTTCCTTGGAATCCTTCTTCTTGATTTGGCACTTGACATCTGGATaGTCGATGACCTCACACACAGCTACGCAGCTCAGGATCGGGCCA | + |
Preference number: 5 (lower is better) Translates to: ISLESFFLIWHLTSG*SMTSHTATQLRIGP Trigger: TGGCCCGATCCTGAGCTGCGTAGCTGTGTGTGAGGTCATCGATCATCCAGATGTCAAGTGCCAAATCAAGAAGAAGGATTCCAAGGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS CCA 90 bp | TCTTTTCAAACTCTGCCTTCTTGGCACTGTGGATTGTCAGGATCTTaGAGGATAAAATCCAGCTCACCAGGTCCCAGGCCTGTTTGTCTG | + |
Preference number: 5 (lower is better) Translates to: SFQTLPSWHCGLSGS*RIKSSSPGPRPVCL Trigger: CAGACAAACAGGCCTGGGACCTGGTGAGCTGGATTTTATCCTCCAAGATCCTGACAATCCACAGTGCCAAGAAGGCAGAGTTTGAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | GCCGGCCTCCATCTGGGCAATTGTAAACACACCTCGGACAGCTTGGACACTTTGTTGGAATCCTTCTTCTaGATTTGGCACTTGACATCT | + |
Preference number: 5 (lower is better) Translates to: AGLHLGNCKHTSDSLDTLLESFF*IWHLTS Trigger: AGATGTCAAGTGCCAAATCAAGAAGAAGGATTCCAA...CAAAGTGTCCAAGCTGTCCGAGGTGTGTTTACAATTGCCCAGATGGAGGCCGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | CACACAGGAGGTAGAGGACAAGTTTCCATAAGGCACACGGTGAGTGGCCCCACTTTGGAATCCTTCTTCTaGATTTGGCACTTGACATCT | + |
Preference number: 5 (lower is better) Translates to: HTGGRGQVSIRHTVSGPTLESFF*IWHLTS Trigger: AGATGTCAAGTGCCAAATCAAGAAGAAGGATTCCAA...AGTGGGGCCACTCACCGTGTGCCTTATGGAAACTTGTCCTCTACCTCCTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | ATAAACACCACAGCAAGGATGGCTGGGCCTCTGCTTACCACTCAACCTCAGGCTCGCAGAAGCTGGTTATaGGTGACTACAAAGTACTTA | + |
Preference number: 5 (lower is better) Translates to: INTTARMAGPLLTTQPQARRSWL*VTTKYL Trigger: TAAGTACTTTGTAGTCACCAATAACCAGCTTCTGCG...AGCCTGAGGTTGAGTGGTAAGCAGAGGCCCAGCCATCCTTGCTGTGGTGTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 |
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CDS-3UTR CAA 90 bp | TCAAAACAAGGCAGTCGCCTAATGATTTATTGTTCCCGTTGCACACATTCTGTCAGGTCCCAGGCCTGTTaGTCTGTGTCTCTGGAAGAC | + |
Preference number: 5 (lower is better) Translates to: SKQGSRLMIYCSRCTHSVRSQAC*SVSLED Trigger: GTCTTCCAGAGACACAGACAAACAGGCCTGGGACCT...GACAGAATGTGTGCAACGGGAACAATAAATCATTAGGCGACTGCCTTGTTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CCA 90 bp | CTAGGCGGCTACCATGGAAGGCATAGATTAGGTCTCGTTCTCCTTTaGTCTCATAAAATCTGGAGTTGGCCGGGTCAAAGTACTCAATTT | + |
Preference number: 5 (lower is better) Translates to: LGGYHGRHRLGLVLL*SHKIWSWPGQSTQF Trigger: AAATTGAGTACTTTGACCCGGCCAACTCCAGATTTTATGAGACCAAAGGAGAACGAGACCTAATCTATGCCTTCCATGGTAGCCGCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | CAGGACTTTTTCCTTTGGCTCTGGCTGAAGAGCCACCTCCCTAGACTATTTAGGCTGCGGTCTATTTCCTaGGAATCCTTCTTCTTGATT | + |
Preference number: 5 (lower is better) Translates to: QDFFLWLWLKSHLPRLFRLRSIS*ESFFLI Trigger: AATCAAGAAGAAGGATTCCAAGGAAATAGACCGCAG...CCTAAATAGTCTAGGGAGGTGGCTCTTCAGCCAGAGCCAAAGGAAAAAGTCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS CCA 90 bp | CATAGATTAGGTCTCGTTCTCCTTTGGTCTCATAAAATCTGGAGTTaGCCGGGTCAAAGTACTCAATTTCAAATAGGAAATCCGGGGTGG | + |
Preference number: 5 (lower is better) Translates to: HRLGLVLLWSHKIWS*PGQSTQFQIGNPGW Trigger: CCACCCCGGATTTCCTATTTGAAATTGAGTACTTTGACCCGGCCAACTCCAGATTTTATGAGACCAAAGGAGAACGAGACCTAATCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | TTTTTCCTTTGGCTCTGGCTGAAGAGCCACCTCCCTAGACTATTTAGGAGGAAGTTGGAATCCTTCTTCTaGATTTGGCACTTGACATCT | + |
Preference number: 5 (lower is better) Translates to: FFLWLWLKSHLPRLFRRKLESFF*IWHLTS Trigger: AGATGTCAAGTGCCAAATCAAGAAGAAGGATTCCAA...CTTCCTCCTAAATAGTCTAGGGAGGTGGCTCTTCAGCCAGAGCCAAAGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS CCA 90 bp | GGAAGGCATAGATTAGGTCTCGTTCTCCTTTGGTCTCATAAAATCTaGAGTTGGCCGGGTCAAAGTACTCAATTTCAAATAGGAAATCCG | + |
Preference number: 5 (lower is better) Translates to: GRHRLGLVLLWSHKI*SWPGQSTQFQIGNP Trigger: CGGATTTCCTATTTGAAATTGAGTACTTTGACCCGGCCAACTCCAGATTTTATGAGACCAAAGGAGAACGAGACCTAATCTATGCCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS-3UTR CAA 90 bp | GAGTCAAAACAAGGCAGTCGCCTAATGATTTATTGTTCCCGTTGCACACATTCTTGGATTGTCAGGATCTaGGAGGATAAAATCCAGCTC | + |
Preference number: 5 (lower is better) Translates to: ESKQGSRLMIYCSRCTHSWIVRI*EDKIQL Trigger: GAGCTGGATTTTATCCTCCAAGATCCTGACAATCCA...AGAATGTGTGCAACGGGAACAATAAATCATTAGGCGACTGCCTTGTTTTGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 |
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CDS-3UTR CAA 90 bp | TCAAAACAAGGCAGTCGCCTAATGATTTATTGTTCCCGTTGCACACATTCTGTCCGCAGAAGCTGGTTATaGGTGACTACAAAGTACTTA | + |
Preference number: 5 (lower is better) Translates to: SKQGSRLMIYCSRCTHSVRRSWL*VTTKYL Trigger: TAAGTACTTTGTAGTCACCAATAACCAGCTTCTGCG...GACAGAATGTGTGCAACGGGAACAATAAATCATTAGGCGACTGCCTTGTTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216702.2 |
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CDS GCA 72 bp | CCCGCTTGTAGCTCTGCAGCGCCGAGGCGAAGAGGCTaGAGCGGAGGTCCGCAGCCAGCACGTCGCGGCTCG | + |
Preference number: 6 (lower is better) Translates to: PACSSAAPRRRG*SGGPQPARRGS Trigger: CGAGCCGCGACGTGCTGGCTGCGGACCTCCGCTGCAGCCTCTTCGCCTCGGCGCTGCAGAGCTACAAGCGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS GCA 72 bp | GCAGCGGAGGTCCGCAGCCAGCACGTCGCGGCTCGCTaGCTCCCTGGCTGCTGCCCTGTTGGAGAGCTGCAT | + |
Preference number: 6 (lower is better) Translates to: AAEVRSQHVAAR*LPGCCPVGELH Trigger: ATGCAGCTCTCCAACAGGGCAGCAGCCAGGGAGGCAGCGAGCCGCGACGTGCTGGCTGCGGACCTCCGCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CAA 90 bp | CTCACACACAGCTACGCAGCTCAGGATCGGGCCAAGAAGGCTATGTaGCCACCCGTGGCCATGAGGACTATAAATGAGGGCCAGGCTCAA | + |
Preference number: 6 (lower is better) Translates to: LTHSYAAQDRAKKAM*PPVAMRTINEGQAQ Trigger: TTGAGCCTGGCCCTCATTTATAGTCCTCATGGCCACGGGTGGCAACATAGCCTTCTTGGCCCGATCCTGAGCTGCGTAGCTGTGTGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CAA 72 bp | AGCTACGCAGCTCAGGATCGGGCCAAGAAGGCTATGTaGCCACCCGTGGCCATGAGGACTATAAATGAGGGC | + |
Preference number: 6 (lower is better) Translates to: SYAAQDRAKKAM*PPVAMRTINEG Trigger: GCCCTCATTTATAGTCCTCATGGCCACGGGTGGCAACATAGCCTTCTTGGCCCGATCCTGAGCTGCGTAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CCA 72 bp | CTGTGTCTCTGGAAGACTGTAGAAGTTCCTTCAAGTTaGGTAACCTGCCAGTGTCCGCAAGCAGGGCCTCGA | + |
Preference number: 6 (lower is better) Translates to: LCLWKTVEVPSS*VTCQCPQAGPR Trigger: TCGAGGCCCTGCTTGCGGACACTGGCAGGTTACCCAACTTGAAGGAACTTCTACAGTCTTCCAGAGACACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CAA 72 bp | TCTGTGTCTCTGGAAGACTGTAGAAGTTCCTTCAAGTaGGGTAACCTGCCAGTGTCCGCAAGCAGGGCCTCG | + |
Preference number: 6 (lower is better) Translates to: SVSLEDCRSSFK*GNLPVSASRAS Trigger: CGAGGCCCTGCTTGCGGACACTGGCAGGTTACCCAACTTGAAGGAACTTCTACAGTCTTCCAGAGACACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS GCA 72 bp | TGGAAGACTGTAGAAGTTCCTTCAAGTTGGGTAACCTaGCAGTGTCCGCAAGCAGGGCCTCGAAGTCCTTAC | + |
Preference number: 6 (lower is better) Translates to: WKTVEVPSSWVT*QCPQAGPRSPY Trigger: GTAAGGACTTCGAGGCCCTGCTTGCGGACACTGGCAGGTTACCCAACTTGAAGGAACTTCTACAGTCTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CCA 72 bp | ACTCTGCCTTCTTGGCACTGTGGATTGTCAGGATCTTaGAGGATAAAATCCAGCTCACCAGGTCCCAGGCCT | + |
Preference number: 6 (lower is better) Translates to: TLPSWHCGLSGS*RIKSSSPGPRP Trigger: AGGCCTGGGACCTGGTGAGCTGGATTTTATCCTCCAAGATCCTGACAATCCACAGTGCCAAGAAGGCAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CAA 72 bp | AACTCTGCCTTCTTGGCACTGTGGATTGTCAGGATCTaGGAGGATAAAATCCAGCTCACCAGGTCCCAGGCC | + |
Preference number: 6 (lower is better) Translates to: NSAFLALWIVRI*EDKIQLTRSQA Trigger: GGCCTGGGACCTGGTGAGCTGGATTTTATCCTCCAAGATCCTGACAATCCACAGTGCCAAGAAGGCAGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CAA 90 bp | GCCTGTTTGTCTGTGTCTCTGGAAGACTGTAGAAGTTCCTTCAAGTaGGGTAACCTGCCAGTGTCCGCAAGCAGGGCCTCGAAGTCCTTA | + |
Preference number: 6 (lower is better) Translates to: ACLSVSLEDCRSSFK*GNLPVSASRASKSL Trigger: TAAGGACTTCGAGGCCCTGCTTGCGGACACTGGCAGGTTACCCAACTTGAAGGAACTTCTACAGTCTTCCAGAGACACAGACAAACAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS TCA 72 bp | AAGTCTTGTTCAGGTGGCAGTGCAGGCCATTGTGAATaGTGGAGTGGAAGTTCTCTAGGCGGCTACCATGGA | + |
Preference number: 6 (lower is better) Translates to: KSCSGGSAGHCE*WSGSSLGGYHG Trigger: TCCATGGTAGCCGCCTAGAGAACTTCCACTCCATCATTCACAATGGCCTGCACTGCCACCTGAACAAGACTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CAA 90 bp | TCAGCTGCTGGATCTTTTCAAACTCTGCCTTCTTGGCACTGTGGATaGTCAGGATCTTGGAGGATAAAATCCAGCTCACCAGGTCCCAGG | + |
Preference number: 6 (lower is better) Translates to: SAAGSFQTLPSWHCG*SGSWRIKSSSPGPR Trigger: CCTGGGACCTGGTGAGCTGGATTTTATCCTCCAAGATCCTGACAATCCACAGTGCCAAGAAGGCAGAGTTTGAAAAGATCCAGCAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CAA 90 bp | ATCTTTTCAAACTCTGCCTTCTTGGCACTGTGGATTGTCAGGATCTaGGAGGATAAAATCCAGCTCACCAGGTCCCAGGCCTGTTTGTCT | + |
Preference number: 6 (lower is better) Translates to: IFSNSAFLALWIVRI*EDKIQLTRSQACLS Trigger: AGACAAACAGGCCTGGGACCTGGTGAGCTGGATTTTATCCTCCAAGATCCTGACAATCCACAGTGCCAAGAAGGCAGAGTTTGAAAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CCA 72 bp | CGGTCAGCTGCTGGATCTTTTCAAACTCTGCCTTCTTaGCACTGTGGATTGTCAGGATCTTGGAGGATAAAA | + |
Preference number: 6 (lower is better) Translates to: RSAAGSFQTLPS*HCGLSGSWRIK Trigger: TTTTATCCTCCAAGATCCTGACAATCCACAGTGCCAAGAAGGCAGAGTTTGAAAAGATCCAGCAGCTGACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CCA 72 bp | TACCATGGAAGGCATAGATTAGGTCTCGTTCTCCTTTaGTCTCATAAAATCTGGAGTTGGCCGGGTCAAAGT | + |
Preference number: 6 (lower is better) Translates to: YHGRHRLGLVLL*SHKIWSWPGQS Trigger: ACTTTGACCCGGCCAACTCCAGATTTTATGAGACCAAAGGAGAACGAGACCTAATCTATGCCTTCCATGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CAA 72 bp | GGATCTTTTCAAACTCTGCCTTCTTGGCACTGTGGATaGTCAGGATCTTGGAGGATAAAATCCAGCTCACCA | + |
Preference number: 6 (lower is better) Translates to: GSFQTLPSWHCG*SGSWRIKSSSP Trigger: TGGTGAGCTGGATTTTATCCTCCAAGATCCTGACAATCCACAGTGCCAAGAAGGCAGAGTTTGAAAAGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CAA 72 bp | CTACTTCATAGTGAGACTCTGTCCCTTCTTCTTGATTaGGCACTTGACATCTGGATGATCGATGACCTCACA | + |
Preference number: 6 (lower is better) Translates to: LLHSETLSLLLD*ALDIWMIDDLT Trigger: TGTGAGGTCATCGATCATCCAGATGTCAAGTGCCAAATCAAGAAGAAGGGACAGAGTCTCACTATGAAGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216486.2 |
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CDS CCA 72 bp | GGTCTCGTTCTCCTTTGGTCTCATAAAATCTGGAGTTaGCCGGGTCAAAGTACTCAATTTCAAATAGGAAAT | + |
Preference number: 6 (lower is better) Translates to: GLVLLWSHKIWS*PGQSTQFQIGN Trigger: ATTTCCTATTTGAAATTGAGTACTTTGACCCGGCCAACTCCAGATTTTATGAGACCAAAGGAGAACGAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |
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CDS CCA 72 bp | AGATTAGGTCTCGTTCTCCTTTGGTCTCATAAAATCTaGAGTTGGCCGGGTCAAAGTACTCAATTTCAAATA | + |
Preference number: 6 (lower is better) Translates to: RLGLVLLWSHKI*SWPGQSTQFQI Trigger: TATTTGAAATTGAGTACTTTGACCCGGCCAACTCCAGATTTTATGAGACCAAAGGAGAACGAGACCTAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069000.9 ENSMUST00000213396.2 ENSMUST00000216486.2 ENSMUST00000216702.2 |