Pregenerated sensors for PARP12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038507Ensembl transcript IDs: ENSMUST00000038398.7
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATGGGTCAAGCCCAGGACTTAGGGAGACACTAATGTATGTTTCCTaGCAGGGAGAGTTAAGTTTCACTTATAGCAAGAACTGCCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: YGSSPGLRETLMYVS*QGELSFTYSKNCPS Trigger: ACTTGGGCAGTTCTTGCTATAAGTGAAACTTAACTCTCCCTGGCAGGAAACATACATTAGTGTCTCCCTAAGTCCTGGGCTTGACCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| 3UTR-3UTR CCA 90 bp | ATAAAATCCACACCTGGAAGATGTCCAGTGTGCTTAAGGGATTTGGGTAGAGGCCCAGACAGACAGATGTaGCAGAAACGCCTAATGCAT | + |
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Preference number: 2 (lower is better) Translates to: IKSTPGRCPVCLRDLGRGPDRQM*QKRLMH Trigger: ATGCATTAGGCGTTTCTGCCACATCTGTCTGTCTGG...GCCTCTACCCAAATCCCTTAAGCACACTGGACATCTTCCAGGTGTGGATTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| 3UTR-3UTR CAA 90 bp | TGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACCAGAATTGTTAGACAAGGATTAAGATaGTGGCTTCAAGTCGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: CYSDKSKLDHKTLQTRIVRQGLR*WLQVGP Trigger: AGGCCCGACTTGAAGCCACAATCTTAATCCTTGTCT...AACAATTCTGGTTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| 3UTR GCA 72 bp | AGCCCAGGACTTAGGGAGACACTAATGTATGTTTCCTaGCAGGGAGAGTTAAGTTTCACTTATAGCAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: SPGLRETLMYVS*QGELSFTYSKN Trigger: GTTCTTGCTATAAGTGAAACTTAACTCTCCCTGGCAGGAAACATACATTAGTGTCTCCCTAAGTCCTGGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR GCA 90 bp | GAAAGAAAGACTTTCCAAATAGCTCCACCAGACAGACAGATGTGGCAGAAACGCGGTCACCTCTGCCACTaGCACCGCGGCCTGGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ERKTFQIAPPDRQMWQKRGHLCH*HRGLGH Trigger: ATGGCCCAGGCCGCGGTGGCAGTGGCAGAGGTGACC...GCGTTTCTGCCACATCTGTCTGTCTGGTGGAGCTATTTGGAAAGTCTTTCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CCA 90 bp | CCAGCTGCTCAGGAGACTGAGGCAGAATATAATTTAGCAAAACCCTGCCTCATAGCCGCGCACAGCAGCTaGGTCACCTCTGCCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: PAAQETEAEYNLAKPCLIAAHSS*VTSATA Trigger: GGCAGTGGCAGAGGTGACCCAGCTGCTGTGCGCGGC...TATGAGGCAGGGTTTTGCTAAATTATATTCTGCCTCAGTCTCCTGAGCAGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CCA 90 bp | CACTATGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACCAGAATGCTCTGGCCTTCCTTaGCTGGAGGGCGGACGAAGG | + |
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Preference number: 4 (lower is better) Translates to: HYATLTKANWTTRPSKPECSGLP*LEGGRR Trigger: CCTTCGTCCGCCCTCCAGCCAAGGAAGGCCAGAGCA...TTCTGGTTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCATAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR TCA 90 bp | AGGCCACTATGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACCTGGGGGTTTGGTGACTaGAGAAGCTGTGGAGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: RPLCYSDKSKLDHKTLQTWGFGD*RSCGES Trigger: CGACTCTCCACAGCTTCTTCAGTCACCAAACCCCCA...GGTTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCATAGTGGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR TCA 90 bp | AGAAAGAAAGACTTTCCAAATAGCTCCACCAGACAGACAGATGTGGCAGAAACGCCACGTCACTGCTGCTaGTGGTGGTCACAGGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RKKDFPNSSTRQTDVAETPRHCC*WWSQGA Trigger: GGCACCCTGTGACCACCATCAGCAGCAGTGACGTGG...CGTTTCTGCCACATCTGTCTGTCTGGTGGAGCTATTTGGAAAGTCTTTCTTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR GCA 90 bp | GAAAGAAAGACTTTCCAAATAGCTCCACCAGACAGACAGATGTGGCAGAAACGCGAACTTCAAGGTGGCTaGCTGGGCATCAGCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: ERKTFQIAPPDRQMWQKRELQGG*LGISPW Trigger: CCAGGGGCTGATGCCCAGGCAGCCACCTTGAAGTTC...GCGTTTCTGCCACATCTGTCTGTCTGGTGGAGCTATTTGGAAAGTCTTTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR TCA 90 bp | GAAAGAAAGACTTTCCAAATAGCTCCACCAGACAGACAGATGTGGCAGAAACGCAGGAAGTGCTGCCCCTaGCGAAATCTCCGACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: ERKTFQIAPPDRQMWQKRRKCCP*RNLRPA Trigger: TGCTGGTCGGAGATTTCGTCAGGGGCAGCACTTCCT...GCGTTTCTGCCACATCTGTCTGTCTGGTGGAGCTATTTGGAAAGTCTTTCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR GCA 90 bp | CCACTATGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACCAGAACTCCCCTGTGGACCTaGGGGAGAAGGAGACACTTT | + |
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Preference number: 4 (lower is better) Translates to: PLCYSDKSKLDHKTLQTRTPLWT*GRRRHF Trigger: AAAGTGTCTCCTTCTCCCGCAGGTCCACAGGGGAGT...TCTGGTTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCATAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CCA 90 bp | TGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACCAGAATTGTTCCTGGAACTTCAAGGTaGCTGCCTGGGCATCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: CYSDKSKLDHKTLQTRIVPGTSR*LPGHQP Trigger: GGGCTGATGCCCAGGCAGCCACCTTGAAGTTCCAGG...AACAATTCTGGTTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR GCA 90 bp | AGAAAGAAAGACTTTCCAAATAGCTCCACCAGACAGACAGATGTGGCAGAAACGAGAAACTTGCAGAGATaGAGCTGCGCGCAGAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: RKKDFPNSSTRQTDVAETRNLQR*SCAQSP Trigger: CGGGCTCTGCGCGCAGCTGCATCTCTGCAAGTTTCT...CGTTTCTGCCACATCTGTCTGTCTGGTGGAGCTATTTGGAAAGTCTTTCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR GCA 90 bp | AGAAAGAAAGACTTTCCAAATAGCTCCACCAGACAGACAGATGTGGCAGAAACGATGGTGGTCACAGGGTaGCCTGAGCCTTGTCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RKKDFPNSSTRQTDVAETMVVTG*PEPCRP Trigger: TGGACGACAAGGCTCAGGGCACCCTGTGACCACCAT...CGTTTCTGCCACATCTGTCTGTCTGGTGGAGCTATTTGGAAAGTCTTTCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR TCA 90 bp | CCACTATGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACCAGAAAGGAGACACTTTGCTaGGGGCTGAGCCCTTATTCT | + |
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Preference number: 4 (lower is better) Translates to: PLCYSDKSKLDHKTLQTRKETLC*GLSPYS Trigger: AGAATAAGGGCTCAGCCCTCAGCAAAGTGTCTCCTT...TCTGGTTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCATAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR GCA 90 bp | GGGTGTAGCTCAGTGGTAGAGTGCTTTTGTAGCAAGCACAAAGCCCTGTATTCCCCCAACCTTTCCAACTaGTCCAGACTCTCAGAGTTA | + |
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Preference number: 4 (lower is better) Translates to: GCSSVVECFCSKHKALYSPNLSN*SRLSEL Trigger: TAACTCTGAGAGTCTGGAGCAGTTGGAAAGGTTGGG...GGAATACAGGGCTTTGTGCTTGCTACAAAAGCACTCTACCACTGAGCTACACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR GCA 90 bp | CCAGCTGCTCAGGAGACTGAGGCAGAATATAATTTAGCAAAACCCTGCCTCATATGGTTGGGTCGGACATaGTGTTCACGCAGCTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: PAAQETEAEYNLAKPCLIWLGRT*CSRSCH Trigger: ATGACAGCTGCGTGAACAGCATGTCCGACCCAACCA...TATGAGGCAGGGTTTTGCTAAATTATATTCTGCCTCAGTCTCCTGAGCAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR TCA 90 bp | CACTATGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACCAGAATTGGCACTAGTACCATaGAACAGCTGCCTCTCGTCT | + |
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Preference number: 4 (lower is better) Translates to: HYATLTKANWTTRPSKPELALVP*NSCLSS Trigger: AGACGAGAGGCAGCTGTTTCATGGTACTAGTGCCAA...TTCTGGTTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCATAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR GCA 90 bp | GGGTGTAGCTCAGTGGTAGAGTGCTTTTGTAGCAAGCACAAAGCCCTGTATTCCTGTCGTCCATATTCCTaGCAAGAACCAAACTCATCC | + |
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Preference number: 4 (lower is better) Translates to: GCSSVVECFCSKHKALYSCRPYS*QEPNSS Trigger: GGATGAGTTTGGTTCTTGGCAGGAATATGGACGACA...GGAATACAGGGCTTTGTGCTTGCTACAAAAGCACTCTACCACTGAGCTACACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR GCA 90 bp | ATGTATGTTTCCTGCCAGGGAGAGTTAAGTTTCACTTATAGCAAGAACTGCCCACGCCAGTCAAAGTTCTaGTGGCAGATGGCATCCACG | + |
|
Preference number: 4 (lower is better) Translates to: MYVSCQGELSFTYSKNCPRQSKF*WQMAST Trigger: CGTGGATGCCATCTGCCAGCAGAACTTTGACTGGCG...TGGGCAGTTCTTGCTATAAGTGAAACTTAACTCTCCCTGGCAGGAAACATACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR GCA 90 bp | CCAGCTGCTCAGGAGACTGAGGCAGAATATAATTTAGCAAAACCCTGCCTCATACAAAGTAGCTCCCTTTaGCATAGGATGTGCCGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PAAQETEAEYNLAKPCLIQSSSL*HRMCRA Trigger: TGCACGGCACATCCTATGGCAAAGGGAGCTACTTTG...TATGAGGCAGGGTTTTGCTAAATTATATTCTGCCTCAGTCTCCTGAGCAGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CCA 90 bp | GAAAGAAAGACTTTCCAAATAGCTCCACCAGACAGACAGATGTGGCAGAAACGCTTGTGTTTTCCAGCCTaGAACTTCAAGGTGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: ERKTFQIAPPDRQMWQKRLCFPA*NFKVAA Trigger: GGCAGCCACCTTGAAGTTCCAGGCTGGAAAACACAA...GCGTTTCTGCCACATCTGTCTGTCTGGTGGAGCTATTTGGAAAGTCTTTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CCA 90 bp | TGTGACATAAAATCCACACCTGGAAGATGTCCAGTGTGCTTAAGGGATTTGGGTAGTTCTGCTGGCAGATaGCATCCACGAAGTTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: CDIKSTPGRCPVCLRDLGSSAGR*HPRSWH Trigger: GTGCCAACTTCGTGGATGCCATCTGCCAGCAGAACT...ACCCAAATCCCTTAAGCACACTGGACATCTTCCAGGTGTGGATTTTATGTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CCA 90 bp | AAAGGCCACTATGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACAGTCAAAGTTCTGCTaGCAGATGGCATCCACGAAG | + |
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Preference number: 4 (lower is better) Translates to: KGHYATLTKANWTTRPSKQSKFC*QMASTK Trigger: CTTCGTGGATGCCATCTGCCAGCAGAACTTTGACTG...TTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCATAGTGGCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR TCA 90 bp | CCAGCTGCTCAGGAGACTGAGGCAGAATATAATTTAGCAAAACCCTGCCTCATAAGTGAAGGGTCATTCTaGAGCAAGAGTTGGCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: PAAQETEAEYNLAKPCLISEGSF*SKSWQS Trigger: GCTTTGCCAACTCTTGCTTCAGAATGACCCTTCACT...TATGAGGCAGGGTTTTGCTAAATTATATTCTGCCTCAGTCTCCTGAGCAGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR TCA 90 bp | CCAGCTGCTCAGGAGACTGAGGCAGAATATAATTTAGCAAAACCCTGCCTCATAGTGAAAGCCAGCAGCTaGCTCTGTATACACAATCCT | + |
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Preference number: 4 (lower is better) Translates to: PAAQETEAEYNLAKPCLIVKASS*LCIHNP Trigger: AGGATTGTGTATACAGAGTCAGCTGCTGGCTTTCAC...TATGAGGCAGGGTTTTGCTAAATTATATTCTGCCTCAGTCTCCTGAGCAGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR TCA 90 bp | GAAAGAAAGACTTTCCAAATAGCTCCACCAGACAGACAGATGTGGCAGAAACGCGCCAGGAACATCATGTaGGAGTGTGTGTCGGATTTA | + |
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Preference number: 4 (lower is better) Translates to: ERKTFQIAPPDRQMWQKRARNIM*ECVSDL Trigger: TAAATCCGACACACACTCTCACATGATGTTCCTGGC...GCGTTTCTGCCACATCTGTCTGTCTGGTGGAGCTATTTGGAAAGTCTTTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR TCA 90 bp | AAAGGCCACTATGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACTGAGCCCTTATTCTTaGTGTCATATGCATTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: KGHYATLTKANWTTRPSKLSPYS*CHMHSG Trigger: ACCGGAATGCATATGACATCAAGAATAAGGGCTCAG...TTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCATAGTGGCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR TCA 90 bp | ATGTATGTTTCCTGCCAGGGAGAGTTAAGTTTCACTTATAGCAAGAACTGCCCACACTTTGCTGAGGGCTaGGCCCTTATTCTTGATGTC | + |
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Preference number: 4 (lower is better) Translates to: MYVSCQGELSFTYSKNCPHFAEG*ALILDV Trigger: GACATCAAGAATAAGGGCTCAGCCCTCAGCAAAGTG...TGGGCAGTTCTTGCTATAAGTGAAACTTAACTCTCCCTGGCAGGAAACATACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CCA 90 bp | CCAGCTGCTCAGGAGACTGAGGCAGAATATAATTTAGCAAAACCCTGCCTCATATCAGTATATGTGAGGTaGTCAACACCATGTGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PAAQETEAEYNLAKPCLISVYVR*STPCVL Trigger: GAGGACACATGGTGTTGACCACCTCACATATACTGA...TATGAGGCAGGGTTTTGCTAAATTATATTCTGCCTCAGTCTCCTGAGCAGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CCA 90 bp | CACTATGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACCAGAAGAGTTAGTGAACTCATaGGACCTCTTACAGCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: HYATLTKANWTTRPSKPEELVNS*DLLQLV Trigger: CACAAGCTGTAAGAGGTCCCATGAGTTCACTAACTC...TTCTGGTTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCATAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CCA 90 bp | AAAGGCCACTATGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACGATGGCACTTTTCTTaGAAGCTACAACTCTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: KGHYATLTKANWTTRPSKRWHFS*KLQLFR Trigger: TCGGAAGAGTTGTAGCTTCCAAGAAAAGTGCCATCG...TTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCATAGTGGCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CCA 90 bp | CCACTATGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACCAGACAAAAACTACAAAGATaGTTGGGTCGGACATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PLCYSDKSKLDHKTLQTRQKLQR*LGRTCC Trigger: ACAGCATGTCCGACCCAACCATCTTTGTAGTTTTTG...TCTGGTTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCATAGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR GCA 90 bp | TGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACCAGAATTGTTCCAAATCCTTCCATTTaGCTCCATCCAAGAATTGCC | + |
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Preference number: 4 (lower is better) Translates to: CYSDKSKLDHKTLQTRIVPNPSI*LHPRIA Trigger: GGCAATTCTTGGATGGAGGCAAATGGAAGGATTTGG...AACAATTCTGGTTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CCA 90 bp | AGAAAGAAAGACTTTCCAAATAGCTCCACCAGACAGACAGATGTGGCAGAAACGTTAATGCACTGCTTTTaGAAGGAGCAAGAGCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: RKKDFPNSSTRQTDVAETLMHCF*KEQEPK Trigger: CTTCGGCTCTTGCTCCTTCCAAAAGCAGTGCATTAA...CGTTTCTGCCACATCTGTCTGTCTGGTGGAGCTATTTGGAAAGTCTTTCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CCA 90 bp | CACTATGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACCAGAACCCTGTAGGAAGTACTaGCAGATATGGAGTTTAATG | + |
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Preference number: 4 (lower is better) Translates to: HYATLTKANWTTRPSKPEPCRKY*QIWSLM Trigger: CATTAAACTCCATATCTGCCAGTACTTCCTACAGGG...TTCTGGTTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCATAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR TCA 90 bp | TGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACCAGAATTGTTTCAGTCTTCAAGTTGTaGCCATTCCTACAGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: CYSDKSKLDHKTLQTRIVSVFKL*PFLQFF Trigger: GAAGAACTGTAGGAATGGTCACAACTTGAAGACTGA...AACAATTCTGGTTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR TCA 90 bp | GAAAGAAAGACTTTCCAAATAGCTCCACCAGACAGACAGATGTGGCAGAAACGCTCTAAATTATCAAAGTaGAAGCCAGCAGCTGACTCT | + |
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Preference number: 4 (lower is better) Translates to: ERKTFQIAPPDRQMWQKRSKLSK*KPAADS Trigger: AGAGTCAGCTGCTGGCTTTCACTTTGATAATTTAGA...GCGTTTCTGCCACATCTGTCTGTCTGGTGGAGCTATTTGGAAAGTCTTTCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR TCA 90 bp | TGTGACATAAAATCCACACCTGGAAGATGTCCAGTGTGCTTAAGGGATTTGGGTATGTTCCACACCTTCTaGTACTCTTCTGAGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: CDIKSTPGRCPVCLRDLGMFHTF*YSSEEE Trigger: TTCTTCCTCAGAAGAGTATCAGAAGGTGTGGAACAT...ACCCAAATCCCTTAAGCACACTGGACATCTTCCAGGTGTGGATTTTATGTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR GCA 90 bp | AGAAAGAAAGACTTTCCAAATAGCTCCACCAGACAGACAGATGTGGCAGAAACGTGGAGTTTAATGCACTaGTTTTGGAAGGAGCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: RKKDFPNSSTRQTDVAETWSLMH*FWKEQE Trigger: CTCTTGCTCCTTCCAAAAGCAGTGCATTAAACTCCA...CGTTTCTGCCACATCTGTCTGTCTGGTGGAGCTATTTGGAAAGTCTTTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR GCA 90 bp | GAAAGAAAGACTTTCCAAATAGCTCCACCAGACAGACAGATGTGGCAGAAACGCACTGGGATTGCTATATaGTTCTTCAATAAGCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: ERKTFQIAPPDRQMWQKRTGIAI*FFNKLH Trigger: ATGGAGCTTATTGAAGAAGCATATAGCAATCCCAGT...GCGTTTCTGCCACATCTGTCTGTCTGGTGGAGCTATTTGGAAAGTCTTTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CCA 90 bp | GAAAGAAAGACTTTCCAAATAGCTCCACCAGACAGACAGATGTGGCAGAAACGCCAACTCTTCCGAATATaGTACAAGCAAATCTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: ERKTFQIAPPDRQMWQKRQLFRI*YKQICS Trigger: TGAACAGATTTGCTTGTACCATATTCGGAAGAGTTG...GCGTTTCTGCCACATCTGTCTGTCTGGTGGAGCTATTTGGAAAGTCTTTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CCA 90 bp | AGAAAGAAAGACTTTCCAAATAGCTCCACCAGACAGACAGATGTGGCAGAAACGAAGTACTGGCAGATATaGAGTTTAATGCACTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: RKKDFPNSSTRQTDVAETKYWQI*SLMHCF Trigger: AAAGCAGTGCATTAAACTCCATATCTGCCAGTACTT...CGTTTCTGCCACATCTGTCTGTCTGGTGGAGCTATTTGGAAAGTCTTTCTTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR GCA 90 bp | TGTGACATAAAATCCACACCTGGAAGATGTCCAGTGTGCTTAAGGGATTTGGGTTACACAAGGTTTTTCTaGAGAAAAGCTTTGAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: CDIKSTPGRCPVCLRDLGYTRFF*RKALKC Trigger: ACACTTCAAAGCTTTTCTGCAGAAAAACCTTGTGTA...ACCCAAATCCCTTAAGCACACTGGACATCTTCCAGGTGTGGATTTTATGTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 90 bp | GCCCGCAGTCCCGCAGCAGCCGCTCCAGCGCGTCGGTCCCCAGGCTaGTTCGCAAGCGGCGCCGCAGCTCCGCCAACTCCAAGGCGCCCC | + |
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Preference number: 5 (lower is better) Translates to: ARSPAAAAPARRSPG*FASGAAAPPTPRRP Trigger: GGGGCGCCTTGGAGTTGGCGGAGCTGCGGCGCCGCTTGCGAACCAGCCTGGGGACCGACGCGCTGGAGCGGCTGCTGCGGGACTGCGGGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS TCA 90 bp | TCTGGCCTTCCTTGGCTGGAGGGCGGACGAAGGAAGTGCTGCCCCTaGCGAAATCTCCGACCAGCACCCGGGCCAGGAACATCATGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SGLPWLEGGRRKCCP*RNLRPAPGPGTSCE Trigger: CTCACATGATGTTCCTGGCCCGGGTGCTGGTCGGAGATTTCGTCAGGGGCAGCACTTCCTTCGTCCGCCCTCCAGCCAAGGAAGGCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS GCA 90 bp | TGGTTGGGTCGGACATGCTGTTCACGCAGCTGTCATAGAAGGCATTaGTCTGGCCTTCCTTGGCTGGAGGGCGGACGAAGGAAGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WLGRTCCSRSCHRRH*SGLPWLEGGRRKCC Trigger: GCAGCACTTCCTTCGTCCGCCCTCCAGCCAAGGAAGGCCAGAGCAATGCCTTCTATGACAGCTGCGTGAACAGCATGTCCGACCCAACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 90 bp | GTTCACGCAGCTGTCATAGAAGGCATTGCTCTGGCCTTCCTTGGCTaGAGGGCGGACGAAGGAAGTGCTGCCCCTGACGAAATCTCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: VHAAVIEGIALAFLG*RADEGSAAPDEISD Trigger: GTCGGAGATTTCGTCAGGGGCAGCACTTCCTTCGTCCGCCCTCCAGCCAAGGAAGGCCAGAGCAATGCCTTCTATGACAGCTGCGTGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS GCA 90 bp | GAACTTCAAGGTGGCTGCCTGGGCATCAGCCCCTGGAGCACAGAATaGCAAGTAAGCCCTTTCCACGTCACTGCTGCTGATGGTGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ELQGGCLGISPWSTE*QVSPFHVTAADGGH Trigger: GTGACCACCATCAGCAGCAGTGACGTGGAAAGGGCTTACTTGGCATTCTGTGCTCCAGGGGCTGATGCCCAGGCAGCCACCTTGAAGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS TCA 90 bp | TCCTACAGTTCTTCCCGGTCTTCAGGAACTTGCAGTTGCCGTAGATaGGAAACTTGCAGAGATGCAGCTGCGCGCAGAGCCCGGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SYSSSRSSGTCSCRR*ETCRDAAARRARCS Trigger: GCTGCACCGGGCTCTGCGCGCAGCTGCATCTCTGCAAGTTTCTCATCTACGGCAACTGCAAGTTCCTGAAGACCGGGAAGAACTGTAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 90 bp | TTTTCCAGCCTGGAACTTCAAGGTGGCTGCCTGGGCATCAGCCCCTaGAGCACAGAATGCCAAGTAAGCCCTTTCCACGTCACTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSSLELQGGCLGISP*STECQVSPFHVTAA Trigger: AGCAGCAGTGACGTGGAAAGGGCTTACTTGGCATTCTGTGCTCCAGGGGCTGATGCCCAGGCAGCCACCTTGAAGTTCCAGGCTGGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS TCA 90 bp | CTGGAGCACAGAATGCCAAGTAAGCCCTTTCCACGTCACTGCTGCTaGTGGTGGTCACAGGGTGCCCTGAGCCTTGTCGTCCATATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LEHRMPSKPFPRHCC*WWSQGALSLVVHIP Trigger: AGGAATATGGACGACAAGGCTCAGGGCACCCTGTGACCACCATCAGCAGCAGTGACGTGGAAAGGGCTTACTTGGCATTCTGTGCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CAA 90 bp | ATAAAATCCACACCTGGAAGATGTCCAGTGTGCTTAAGGGATTTGGGTAGAGGCTTGCTCTGGCCTTCCTaGGCTGGAGGGCGGACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IKSTPGRCPVCLRDLGRGLLWPS*AGGRTK Trigger: CTTCGTCCGCCCTCCAGCCAAGGAAGGCCAGAGCAA...GCCTCTACCCAAATCCCTTAAGCACACTGGACATCTTCCAGGTGTGGATTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS TCA 90 bp | ACTCCCCTGTGGACCTGCGGGAGAAGGAGACACTTTGCTGAGGGCTaGGCCCTTATTCTTGATGTCATATGCATTCCGGTAAGTAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: TPLWTCGRRRHFAEG*ALILDVICIPVSRE Trigger: CTCTCTACTTACCGGAATGCATATGACATCAAGAATAAGGGCTCAGCCCTCAGCAAAGTGTCTCCTTCTCCCGCAGGTCCACAGGGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CAA 90 bp | GGGTGTAGCTCAGTGGTAGAGTGCTTTTGTAGCAAGCACAAAGCCCTGTATTCCGGAGAAGGAGACACTTaGCTGAGGGCTGAGCCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GCSSVVECFCSKHKALYSGEGDT*LRAEPL Trigger: TAAGGGCTCAGCCCTCAGCAAAGTGTCTCCTTCTCC...GGAATACAGGGCTTTGTGCTTGCTACAAAAGCACTCTACCACTGAGCTACACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS GCA 90 bp | CTGATGGTGGTCACAGGGTGCCCTGAGCCTTGTCGTCCATATTCCTaGCAAGAACCAAACTCATCCATCCAGTACCAAATCCAGTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LMVVTGCPEPCRPYS*QEPNSSIQYQIQSV Trigger: TACTGACTGGATTTGGTACTGGATGGATGAGTTTGGTTCTTGGCAGGAATATGGACGACAAGGCTCAGGGCACCCTGTGACCACCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 90 bp | CCCAACCTTTCCAACTGCTCCAGACTCTCAGAGTTAGTGAACTCATaGGACCTCTTACAGCTTGTGCCAAACTTGCACTCTCCCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PNLSNCSRLSELVNS*DLLQLVPNLHSPCR Trigger: CCTACAGGGAGAGTGCAAGTTTGGCACAAGCTGTAAGAGGTCCCATGAGTTCACTAACTCTGAGAGTCTGGAGCAGTTGGAAAGGTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS GCA 90 bp | AGTAGCCTGCTCACCAGGTCAGAACTTAAGCCCAACCTTTCCAACTaGTCCAGACTCTCAGAGTTAGTGAACTCATGGGACCTCTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: SSLLTRSELKPNLSN*SRLSELVNSWDLLQ Trigger: CTGTAAGAGGTCCCATGAGTTCACTAACTCTGAGAGTCTGGAGCAGTTGGAAAGGTTGGGCTTAAGTTCTGACCTGGTGAGCAGGCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 90 bp | GGGCCGTGTAACTTAGTATTGCAGGACTGCTTCATCTGCACATCCTaGGGAGACACATACTTGGGTCTGCGACAAACCTTTCTGATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GPCNLVLQDCFICTS*GDTYLGLRQTFLIV Trigger: CACTATCAGAAAGGTTTGTCGCAGACCCAAGTATGTGTCTCCCCAGGATGTGCAGATGAAGCAGTCCTGCAATACTAAGTTACACGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 90 bp | GTACTCGGGGTAGACCTGGTGCTTCTCAAAAACTACAAAGATGGTTaGGTCGGACATGCTGTTCACGCAGCTGTCATAGAAGGCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLGVDLVLLKNYKDG*VGHAVHAAVIEGIA Trigger: AGCAATGCCTTCTATGACAGCTGCGTGAACAGCATGTCCGACCCAACCATCTTTGTAGTTTTTGAGAAGCACCAGGTCTACCCCGAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CAA 90 bp | AGCTCAGTGGTAGAGTGCTTTTGTAGCAAGCACAAAGCCCTGTATTCCATCCCCGGAGGAGGTAGAGTATaGAATGAGGTACTCGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSVVECFCSKHKALYSIPGGGRV*NEVLGV Trigger: TACCCCGAGTACCTCATTCAATACTCTACCTCCTCC...GGGGATGGAATACAGGGCTTTGTGCTTGCTACAAAAGCACTCTACCACTGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS GCA 90 bp | CACTCTCCCTGTAGGAAGTACTGGCAGATATGGAGTTTAATGCACTaGTTTTGGAAGGAGCAAGAGCCGAAGGGTCCATCACCTTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HSPCRKYWQIWSLMH*FWKEQEPKGPSPLL Trigger: CAACAAAGGTGATGGACCCTTCGGCTCTTGCTCCTTCCAAAAGCAGTGCATTAAACTCCATATCTGCCAGTACTTCCTACAGGGAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS GCA 90 bp | ATGCTCTTTGGGCCGTGTAACTTAGTATTGCAGGACTGCTTCATCTaGACATCCTGGGGAGACACATACTTGGGTCTGCGACAAACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: MLFGPCNLVLQDCFI*TSWGDTYLGLRQTF Trigger: AAAGGTTTGTCGCAGACCCAAGTATGTGTCTCCCCAGGATGTGCAGATGAAGCAGTCCTGCAATACTAAGTTACACGGCCCAAAGAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 90 bp | CTTGTGCCAAACTTGCACTCTCCCTGTAGGAAGTACTGGCAGATATaGAGTTTAATGCACTGCTTTTGGAAGGAGCAAGAGCCGAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LVPNLHSPCRKYWQI*SLMHCFWKEQEPKG Trigger: ACCCTTCGGCTCTTGCTCCTTCCAAAAGCAGTGCATTAAACTCCATATCTGCCAGTACTTCCTACAGGGAGAGTGCAAGTTTGGCACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CAA 90 bp | CCAGCTGCTCAGGAGACTGAGGCAGAATATAATTTAGCAAAACCCTGCCTCATAGGGACCTCTTACAGCTaGTGCCAAACTTGCACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PAAQETEAEYNLAKPCLIGTSYS*CQTCTL Trigger: GAGAGTGCAAGTTTGGCACAAGCTGTAAGAGGTCCC...TATGAGGCAGGGTTTTGCTAAATTATATTCTGCCTCAGTCTCCTGAGCAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS TCA 90 bp | CCAAATCCAGTCAGTAGTAAGGATGAAATGTGGGGGTTTGGTGACTaGAGAAGCTGTGGAGAGTCGGCGAGCCAGAGTATTACCAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: PNPVSSKDEMWGFGD*RSCGESASQSITKL Trigger: AAGTTTGGTAATACTCTGGCTCGCCGACTCTCCACAGCTTCTTCAGTCACCAAACCCCCACATTTCATCCTTACTACTGACTGGATTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 90 bp | CAACTCTTCCGAATATGGTACAAGCAAATCTGTTCACTCTCCTCCTaGCTAGGAGTGCCTGGTGACACAGGACCTGAACTGTCTTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: QLFRIWYKQICSLSS*LGVPGDTGPELSFL Trigger: AAGAAAAGACAGTTCAGGTCCTGTGTCACCAGGCACTCCTAGCCAGGAGGAGAGTGAACAGATTTGCTTGTACCATATTCGGAAGAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CAA 90 bp | AGCTCAGTGGTAGAGTGCTTTTGTAGCAAGCACAAAGCCCTGTATTCCATCCCCTTTAATGCACTGCTTTaGGAAGGAGCAAGAGCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSVVECFCSKHKALYSIPFNALL*EGARAE Trigger: TTCGGCTCTTGCTCCTTCCAAAAGCAGTGCATTAAA...GGGGATGGAATACAGGGCTTTGTGCTTGCTACAAAAGCACTCTACCACTGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CAA 90 bp | CACTATGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACCAGAATGGGGAGACACATACTaGGGTCTGCGACAAACCTTT | + |
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Preference number: 5 (lower is better) Translates to: HYATLTKANWTTRPSKPEWGDTY*GLRQTF Trigger: AAAGGTTTGTCGCAGACCCAAGTATGTGTCTCCCCA...TTCTGGTTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCATAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS TCA 90 bp | GTGAAGGGTCATTCTGAAGCAAGAGTTGGCAAAGCTCAGTATATGTaGGGTGGTCAACACCATGTGTCCTCAACACACTCAGGTTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VKGHSEARVGKAQYM*GGQHHVSSTHSGCD Trigger: ATCACAACCTGAGTGTGTTGAGGACACATGGTGTTGACCACCTCACATATACTGAGCTTTGCCAACTCTTGCTTCAGAATGACCCTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 90 bp | CTCTTACAGCTTGTGCCAAACTTGCACTCTCCCTGTAGGAAGTACTaGCAGATATGGAGTTTAATGCACTGCTTTTGGAAGGAGCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: LLQLVPNLHSPCRKY*QIWSLMHCFWKEQE Trigger: CTCTTGCTCCTTCCAAAAGCAGTGCATTAAACTCCATATCTGCCAGTACTTCCTACAGGGAGAGTGCAAGTTTGGCACAAGCTGTAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CAA 90 bp | CACTATGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACCAGAAGCTGAGCCCTTATTCTaGATGTCATATGCATTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: HYATLTKANWTTRPSKPEAEPLF*MSYAFR Trigger: CCGGAATGCATATGACATCAAGAATAAGGGCTCAGC...TTCTGGTTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCATAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CAA 90 bp | CCAGCTGCTCAGGAGACTGAGGCAGAATATAATTTAGCAAAACCCTGCCTCATACTGCATCTGACATTTTaGCCACTGGTAGACTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAAQETEAEYNLAKPCLILHLTF*PLVDFP Trigger: TGGGAAGTCTACCAGTGGCAAAAATGTCAGATGCAG...TATGAGGCAGGGTTTTGCTAAATTATATTCTGCCTCAGTCTCCTGAGCAGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CAA 90 bp | AGAAAGAAAGACTTTCCAAATAGCTCCACCAGACAGACAGATGTGGCAGAAACGTCGATGGCACTTTTCTaGGAAGCTACAACTCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RKKDFPNSSTRQTDVAETSMALF*EATTLP Trigger: CGGAAGAGTTGTAGCTTCCAAGAAAAGTGCCATCGA...CGTTTCTGCCACATCTGTCTGTCTGGTGGAGCTATTTGGAAAGTCTTTCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CAA 90 bp | CCAGCTGCTCAGGAGACTGAGGCAGAATATAATTTAGCAAAACCCTGCCTCATAAAACTACAAAGATGGTaGGGTCGGACATGCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PAAQETEAEYNLAKPCLIKLQRW*GRTCCS Trigger: TGAACAGCATGTCCGACCCAACCATCTTTGTAGTTT...TATGAGGCAGGGTTTTGCTAAATTATATTCTGCCTCAGTCTCCTGAGCAGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS TCA 90 bp | GGATCCGCTCGATCTTCTGAACAAAGTAGAAAGGTAGTGTACGGTTaGAGATGTTCCACACCTTCTGATACTCTTCTGAGGAAGAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSARSSEQSRKVVYG*RCSTPSDTLLRKNS Trigger: TGAGTTCTTCCTCAGAAGAGTATCAGAAGGTGTGGAACATCTTCAACCGTACACTACCTTTCTACTTTGTTCAGAAGATCGAGCGGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS-3UTR CAA 90 bp | CACTATGCTACTCTGACAAAAGCAAACTGGACCACAAGACCCTCCAAACCAGAACTGTCTTTACTGGGATaGCTATATGCTTCTTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: HYATLTKANWTTRPSKPELSLLG*LYASSI Trigger: TATTGAAGAAGCATATAGCAATCCCAGTAAAGACAG...TTCTGGTTTGGAGGGTCTTGTGGTCCAGTTTGCTTTTGTCAGAGTAGCATAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 72 bp | CCCGCAGCAGCCGCTCCAGCGCGTCGGTCCCCAGGCTaGTTCGCAAGCGGCGCCGCAGCTCCGCCAACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PAAAAPARRSPG*FASGAAAPPTP Trigger: TGGAGTTGGCGGAGCTGCGGCGCCGCTTGCGAACCAGCCTGGGGACCGACGCGCTGGAGCGGCTGCTGCGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS TCA 72 bp | CCTTGGCTGGAGGGCGGACGAAGGAAGTGCTGCCCCTaGCGAAATCTCCGACCAGCACCCGGGCCAGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: PWLEGGRRKCCP*RNLRPAPGPGT Trigger: TGTTCCTGGCCCGGGTGCTGGTCGGAGATTTCGTCAGGGGCAGCACTTCCTTCGTCCGCCCTCCAGCCAAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS GCA 72 bp | GGTGGCTGCCTGGGCATCAGCCCCTGGAGCACAGAATaGCAAGTAAGCCCTTTCCACGTCACTGCTGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GGCLGISPWSTE*QVSPFHVTAAD Trigger: ATCAGCAGCAGTGACGTGGAAAGGGCTTACTTGGCATTCTGTGCTCCAGGGGCTGATGCCCAGGCAGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS GCA 72 bp | CGGACATGCTGTTCACGCAGCTGTCATAGAAGGCATTaGTCTGGCCTTCCTTGGCTGGAGGGCGGACGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RTCCSRSCHRRH*SGLPWLEGGRR Trigger: CCTTCGTCCGCCCTCCAGCCAAGGAAGGCCAGAGCAATGCCTTCTATGACAGCTGCGTGAACAGCATGTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 72 bp | CTGGAACTTCAAGGTGGCTGCCTGGGCATCAGCCCCTaGAGCACAGAATGCCAAGTAAGCCCTTTCCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: LELQGGCLGISP*STECQVSPFHV Trigger: GACGTGGAAAGGGCTTACTTGGCATTCTGTGCTCCAGGGGCTGATGCCCAGGCAGCCACCTTGAAGTTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS TCA 72 bp | AGAATGCCAAGTAAGCCCTTTCCACGTCACTGCTGCTaGTGGTGGTCACAGGGTGCCCTGAGCCTTGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: RMPSKPFPRHCC*WWSQGALSLVV Trigger: GACGACAAGGCTCAGGGCACCCTGTGACCACCATCAGCAGCAGTGACGTGGAAAGGGCTTACTTGGCATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS GCA 72 bp | GTGCCGTGCAGACCACAGACCCGCCAGTCAAAGTTCTaGTGGCAGATGGCATCCACGAAGTTGGCACTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: VPCRPQTRQSKF*WQMASTKLALV Trigger: TACTAGTGCCAACTTCGTGGATGCCATCTGCCAGCAGAACTTTGACTGGCGGGTCTGTGGTCTGCACGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 72 bp | CCGTGCAGACCACAGACCCGCCAGTCAAAGTTCTGCTaGCAGATGGCATCCACGAAGTTGGCACTAGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: PCRPQTRQSKFC*QMASTKLALVP Trigger: TGGTACTAGTGCCAACTTCGTGGATGCCATCTGCCAGCAGAACTTTGACTGGCGGGTCTGTGGTCTGCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS TCA 72 bp | TCTTCCCGGTCTTCAGGAACTTGCAGTTGCCGTAGATaGGAAACTTGCAGAGATGCAGCTGCGCGCAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSRSSGTCSCRR*ETCRDAAARRA Trigger: GGCTCTGCGCGCAGCTGCATCTCTGCAAGTTTCTCATCTACGGCAACTGCAAGTTCCTGAAGACCGGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS GCA 72 bp | ATAGTTGTGTTTTCCAGCCTGGAACTTCAAGGTGGCTaGCTGGGCATCAGCCCCTGGAGCACAGAATGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: IVVFSSLELQGG*LGISPWSTECQ Trigger: TTGGCATTCTGTGCTCCAGGGGCTGATGCCCAGGCAGCCACCTTGAAGTTCCAGGCTGGAAAACACAACTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS GCA 72 bp | CATCTCTCGCAAAGTAGCTCCCTTTGCCATAGGATGTaGCGTGCAGACCACAGACCCGCCAGTCAAAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HLSQSSSLCHRM*RADHRPASQSS Trigger: AGAACTTTGACTGGCGGGTCTGTGGTCTGCACGGCACATCCTATGGCAAAGGGAGCTACTTTGCGAGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 72 bp | ACTCATAGTTGTGTTTTCCAGCCTGGAACTTCAAGGTaGCTGCCTGGGCATCAGCCCCTGGAGCACAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: THSCVFQPGTSR*LPGHQPLEHRM Trigger: CATTCTGTGCTCCAGGGGCTGATGCCCAGGCAGCCACCTTGAAGTTCCAGGCTGGAAAACACAACTATGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS GCA 72 bp | GGGCCGTGTAACTTAGTATTGCAGGACTGCTTCATCTaGACATCCTGGGGAGACACATACTTGGGTCTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: GPCNLVLQDCFI*TSWGDTYLGLR Trigger: TCGCAGACCCAAGTATGTGTCTCCCCAGGATGTGCAGATGAAGCAGTCCTGCAATACTAAGTTACACGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CAA 72 bp | GAACTCCCCTGTGGACCTGCGGGAGAAGGAGACACTTaGCTGAGGGCTGAGCCCTTATTCTTGATGTCATAT | + |
|
Preference number: 6 (lower is better) Translates to: ELPCGPAGEGDT*LRAEPLFLMSY Trigger: ATATGACATCAAGAATAAGGGCTCAGCCCTCAGCAAAGTGTCTCCTTCTCCCGCAGGTCCACAGGGGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CAA 90 bp | TTTCTTTCAGAACTCCCCTGTGGACCTGCGGGAGAAGGAGACACTTaGCTGAGGGCTGAGCCCTTATTCTTGATGTCATATGCATTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: FLSELPCGPAGEGDT*LRAEPLFLMSYAFR Trigger: CCGGAATGCATATGACATCAAGAATAAGGGCTCAGCCCTCAGCAAAGTGTCTCCTTCTCCCGCAGGTCCACAGGGGAGTTCTGAAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CAA 90 bp | GGTACTCGGGGTAGACCTGGTGCTTCTCAAAAACTACAAAGATGGTaGGGTCGGACATGCTGTTCACGCAGCTGTCATAGAAGGCATTGC | + |
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Preference number: 6 (lower is better) Translates to: GTRGRPGASQKLQRW*GRTCCSRSCHRRHC Trigger: GCAATGCCTTCTATGACAGCTGCGTGAACAGCATGTCCGACCCAACCATCTTTGTAGTTTTTGAGAAGCACCAGGTCTACCCCGAGTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS TCA 72 bp | TGGACCTGCGGGAGAAGGAGACACTTTGCTGAGGGCTaGGCCCTTATTCTTGATGTCATATGCATTCCGGTA | + |
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Preference number: 6 (lower is better) Translates to: WTCGRRRHFAEG*ALILDVICIPV Trigger: TACCGGAATGCATATGACATCAAGAATAAGGGCTCAGCCCTCAGCAAAGTGTCTCCTTCTCCCGCAGGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 72 bp | CGAATATGGTACAAGCAAATCTGTTCACTCTCCTCCTaGCTAGGAGTGCCTGGTGACACAGGACCTGAACTG | + |
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Preference number: 6 (lower is better) Translates to: RIWYKQICSLSS*LGVPGDTGPEL Trigger: CAGTTCAGGTCCTGTGTCACCAGGCACTCCTAGCCAGGAGGAGAGTGAACAGATTTGCTTGTACCATATTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS TCA 72 bp | GTCAGTAGTAAGGATGAAATGTGGGGGTTTGGTGACTaGAGAAGCTGTGGAGAGTCGGCGAGCCAGAGTATT | + |
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Preference number: 6 (lower is better) Translates to: VSSKDEMWGFGD*RSCGESASQSI Trigger: AATACTCTGGCTCGCCGACTCTCCACAGCTTCTTCAGTCACCAAACCCCCACATTTCATCCTTACTACTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS GCA 72 bp | CTCACCAGGTCAGAACTTAAGCCCAACCTTTCCAACTaGTCCAGACTCTCAGAGTTAGTGAACTCATGGGAC | + |
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Preference number: 6 (lower is better) Translates to: LTRSELKPNLSN*SRLSELVNSWD Trigger: GTCCCATGAGTTCACTAACTCTGAGAGTCTGGAGCAGTTGGAAAGGTTGGGCTTAAGTTCTGACCTGGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CAA 72 bp | GACTGCTTCATCTGCACATCCTGGGGAGACACATACTaGGGTCTGCGACAAACCTTTCTGATAGTGCCATAC | + |
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Preference number: 6 (lower is better) Translates to: DCFICTSWGDTY*GLRQTFLIVPY Trigger: GTATGGCACTATCAGAAAGGTTTGTCGCAGACCCAAGTATGTGTCTCCCCAGGATGTGCAGATGAAGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS GCA 72 bp | ATGCTCTTTGGGCCGTGTAACTTAGTATTGCAGGACTaGTTCATCTGCACATCCTGGGGAGACACATACTTG | + |
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Preference number: 6 (lower is better) Translates to: MLFGPCNLVLQD*FICTSWGDTYL Trigger: CAAGTATGTGTCTCCCCAGGATGTGCAGATGAAGCAGTCCTGCAATACTAAGTTACACGGCCCAAAGAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 72 bp | TCCAACTGCTCCAGACTCTCAGAGTTAGTGAACTCATaGGACCTCTTACAGCTTGTGCCAAACTTGCACTCT | + |
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Preference number: 6 (lower is better) Translates to: SNCSRLSELVNS*DLLQLVPNLHS Trigger: AGAGTGCAAGTTTGGCACAAGCTGTAAGAGGTCCCATGAGTTCACTAACTCTGAGAGTCTGGAGCAGTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CAA 72 bp | GGTAGACCTGGTGCTTCTCAAAAACTACAAAGATGGTaGGGTCGGACATGCTGTTCACGCAGCTGTCATAGA | + |
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Preference number: 6 (lower is better) Translates to: GRPGASQKLQRW*GRTCCSRSCHR Trigger: TCTATGACAGCTGCGTGAACAGCATGTCCGACCCAACCATCTTTGTAGTTTTTGAGAAGCACCAGGTCTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CAA 90 bp | GTATTGCAGGACTGCTTCATCTGCACATCCTGGGGAGACACATACTaGGGTCTGCGACAAACCTTTCTGATAGTGCCATACACAAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: VLQDCFICTSWGDTY*GLRQTFLIVPYTRF Trigger: AAACCTTGTGTATGGCACTATCAGAAAGGTTTGTCGCAGACCCAAGTATGTGTCTCCCCAGGATGTGCAGATGAAGCAGTCCTGCAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS GCA 72 bp | TGTAGGAAGTACTGGCAGATATGGAGTTTAATGCACTaGTTTTGGAAGGAGCAAGAGCCGAAGGGTCCATCA | + |
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Preference number: 6 (lower is better) Translates to: CRKYWQIWSLMH*FWKEQEPKGPS Trigger: TGATGGACCCTTCGGCTCTTGCTCCTTCCAAAAGCAGTGCATTAAACTCCATATCTGCCAGTACTTCCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 72 bp | AAGTACTGGCAGATATGGAGTTTAATGCACTGCTTTTaGAAGGAGCAAGAGCCGAAGGGTCCATCACCTTTG | + |
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Preference number: 6 (lower is better) Translates to: KYWQIWSLMHCF*KEQEPKGPSPL Trigger: CAAAGGTGATGGACCCTTCGGCTCTTGCTCCTTCCAAAAGCAGTGCATTAAACTCCATATCTGCCAGTACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 72 bp | AACTTAGTATTGCAGGACTGCTTCATCTGCACATCCTaGGGAGACACATACTTGGGTCTGCGACAAACCTTT | + |
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Preference number: 6 (lower is better) Translates to: NLVLQDCFICTS*GDTYLGLRQTF Trigger: AAAGGTTTGTCGCAGACCCAAGTATGTGTCTCCCCAGGATGTGCAGATGAAGCAGTCCTGCAATACTAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CAA 72 bp | GAAGTACTGGCAGATATGGAGTTTAATGCACTGCTTTaGGAAGGAGCAAGAGCCGAAGGGTCCATCACCTTT | + |
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Preference number: 6 (lower is better) Translates to: EVLADMEFNALL*EGARAEGSITF Trigger: AAAGGTGATGGACCCTTCGGCTCTTGCTCCTTCCAAAAGCAGTGCATTAAACTCCATATCTGCCAGTACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CAA 90 bp | TCAGAGTTAGTGAACTCATGGGACCTCTTACAGCTTGTGCCAAACTaGCACTCTCCCTGTAGGAAGTACTGGCAGATATGGAGTTTAATG | + |
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Preference number: 6 (lower is better) Translates to: SELVNSWDLLQLVPN*HSPCRKYWQIWSLM Trigger: CATTAAACTCCATATCTGCCAGTACTTCCTACAGGGAGAGTGCAAGTTTGGCACAAGCTGTAAGAGGTCCCATGAGTTCACTAACTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS TCA 72 bp | CATTCTGAAGCAAGAGTTGGCAAAGCTCAGTATATGTaGGGTGGTCAACACCATGTGTCCTCAACACACTCA | + |
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Preference number: 6 (lower is better) Translates to: HSEARVGKAQYM*GGQHHVSSTHS Trigger: TGAGTGTGTTGAGGACACATGGTGTTGACCACCTCACATATACTGAGCTTTGCCAACTCTTGCTTCAGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 72 bp | AACTTGCACTCTCCCTGTAGGAAGTACTGGCAGATATaGAGTTTAATGCACTGCTTTTGGAAGGAGCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: NLHSPCRKYWQI*SLMHCFWKEQE Trigger: CTCTTGCTCCTTCCAAAAGCAGTGCATTAAACTCCATATCTGCCAGTACTTCCTACAGGGAGAGTGCAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CCA 72 bp | CTTGTGCCAAACTTGCACTCTCCCTGTAGGAAGTACTaGCAGATATGGAGTTTAATGCACTGCTTTTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LVPNLHSPCRKY*QIWSLMHCFWK Trigger: CTTCCAAAAGCAGTGCATTAAACTCCATATCTGCCAGTACTTCCTACAGGGAGAGTGCAAGTTTGGCACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CAA 90 bp | CTGTCTTTACTGGGATTGCTATATGCTTCTTCAATAAGCTCCATGTaGTCCAAATCCTTCCATTTGCCTCCATCCAAGAATTGCCACCGA | + |
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Preference number: 6 (lower is better) Translates to: LSLLGLLYASSISSM*SKSFHLPPSKNCHR Trigger: TCGGTGGCAATTCTTGGATGGAGGCAAATGGAAGGATTTGGACAACATGGAGCTTATTGAAGAAGCATATAGCAATCCCAGTAAAGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS TCA 72 bp | TGTAGGCATATATCTGGCAAAAGTGAAGGGTCATTCTaGAGCAAGAGTTGGCAAAGCTCAGTATATGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: CRHISGKSEGSF*SKSWQSSVYVR Trigger: CCTCACATATACTGAGCTTTGCCAACTCTTGCTTCAGAATGACCCTTCACTTTTGCCAGATATATGCCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS TCA 72 bp | AAAGGTAGTGTACGGTTGAAGATGTTCCACACCTTCTaGTACTCTTCTGAGGAAGAACTCAGAGTGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: KGSVRLKMFHTF*YSSEEELRVIF Trigger: GAAGATCACTCTGAGTTCTTCCTCAGAAGAGTATCAGAAGGTGTGGAACATCTTCAACCGTACACTACCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS TCA 72 bp | CGATCTTCTGAACAAAGTAGAAAGGTAGTGTACGGTTaGAGATGTTCCACACCTTCTGATACTCTTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RSSEQSRKVVYG*RCSTPSDTLLR Trigger: CCTCAGAAGAGTATCAGAAGGTGTGGAACATCTTCAACCGTACACTACCTTTCTACTTTGTTCAGAAGATCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CAA 90 bp | AAGCCAGCAGCTGACTCTGTATACACAATCCTGTCTTTACTGGGATaGCTATATGCTTCTTCAATAAGCTCCATGTTGTCCAAATCCTTC | + |
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Preference number: 6 (lower is better) Translates to: KPAADSVYTILSLLG*LYASSISSMLSKSF Trigger: GAAGGATTTGGACAACATGGAGCTTATTGAAGAAGCATATAGCAATCCCAGTAAAGACAGGATTGTGTATACAGAGTCAGCTGCTGGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CAA 72 bp | CTGGGATTGCTATATGCTTCTTCAATAAGCTCCATGTaGTCCAAATCCTTCCATTTGCCTCCATCCAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: LGLLYASSISSM*SKSFHLPPSKN Trigger: ATTCTTGGATGGAGGCAAATGGAAGGATTTGGACAACATGGAGCTTATTGAAGAAGCATATAGCAATCCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS CAA 72 bp | GCTGACTCTGTATACACAATCCTGTCTTTACTGGGATaGCTATATGCTTCTTCAATAAGCTCCATGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: ADSVYTILSLLG*LYASSISSMLS Trigger: GGACAACATGGAGCTTATTGAAGAAGCATATAGCAATCCCAGTAAAGACAGGATTGTGTATACAGAGTCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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| CDS GCA 72 bp | TGTATACACAATCCTGTCTTTACTGGGATTGCTATATaGTTCTTCAATAAGCTCCATGTTGTCCAAATCCTT | + |
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Preference number: 6 (lower is better) Translates to: CIHNPVFTGIAI*FFNKLHVVQIL Trigger: AAGGATTTGGACAACATGGAGCTTATTGAAGAAGCATATAGCAATCCCAGTAAAGACAGGATTGTGTATACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038398.7 |
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