Pregenerated sensors for PARP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026496Ensembl transcript IDs: ENSMUST00000027777.12, ENSMUST00000194434.2, ENSMUST00000194608.2, ENSMUST00000195560.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTATGGAGCTGTGGCTGGTAGGACAAACCACAAACAACCGGCCTaGCCCAGTGCAGCATGGACAAGGGACTTGAAACCAGAGCCCTTT | + |
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Preference number: 1 (lower is better) Translates to: VYGAVAGRTNHKQPA*PSAAWTRDLKPEPF Trigger: AAAGGGCTCTGGTTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| 3UTR TCA 90 bp | ACCACAAACAACCGGCCTGCCCCAGTGCAGCATGGACAAGGGACTTaGAACCAGAGCCCTTTAACCTGTCTGTATAAAACCCTTCCTAAG | + |
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Preference number: 1 (lower is better) Translates to: TTNNRPAPVQHGQGT*NQSPLTCLYKTLPK Trigger: CTTAGGAAGGGTTTTATACAGACAGGTTAAAGGGCTCTGGTTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| 3UTR-3UTR CCA 90 bp | ACAAACCACAAACAACCGGCCTGCCCCAGTGCAGCATGGACAAGGGACTTGAAATTGCCCCCTAGGCCCTaGGTGCTGGGCACAGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: TNHKQPACPSAAWTRDLKLPPRP*VLGTAH Trigger: GTGGGCTGTGCCCAGCACCCAGGGCCTAGGGGGCAA...TTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| 3UTR-3UTR TCA 90 bp | TATGGAGCTGTGGCTGGTAGGACAAACCACAAACAACCGGCCTGCCCCAGTGCACGGCGGCAGCATGGCTaGGGTTTTGTGGTGTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: YGAVAGRTNHKQPACPSARRQHG*GFVVSG Trigger: ACCAGACACCACAAAACCTCAGCCATGCTGCCGCCG...TGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| 3UTR-3UTR GCA 90 bp | ACAAACCACAAACAACCGGCCTGCCCCAGTGCAGCATGGACAAGGGACTTGAAAGGCACTAGGGAGAATTaGCCCCTAGGCCCTGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: TNHKQPACPSAAWTRDLKGTREN*PLGPGC Trigger: GCACCCAGGGCCTAGGGGGCAATTCTCCCTAGTGCC...TTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| 3UTR-3UTR CCA 90 bp | TCTATGGAGCTGTGGCTGGTAGGACAAACCACAAACAACCGGCCTGCCCCAGTGCCTTCGGCGGCAGCATaGCTGAGGTTTTGTGGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: SMELWLVGQTTNNRPAPVPSAAA*LRFCGV Trigger: GACACCACAAAACCTCAGCCATGCTGCCGCCGAAGG...CACTGGGGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| 3UTR-3UTR CCA 90 bp | TATGGAGCTGTGGCTGGTAGGACAAACCACAAACAACCGGCCTGCCCCAGTGCAAGGTTTTGTGGTGTCTaGTGCAGAGGCACTAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: YGAVAGRTNHKQPACPSARFCGV*CRGTRE Trigger: CTCCCTAGTGCCTCTGCACCAGACACCACAAAACCT...TGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTACTGATTACAGACGGTTCAATTTGGAAGACATAGAATCCCAAATGCAACCCCTAGGCCCTGGGTaGTGGGCACAGCCCACCCCT | + |
|
Preference number: 2 (lower is better) Translates to: GCTDYRRFNLEDIESQMQPLGPG*WAQPTP Trigger: AGGGGTGGGCTGTGCCCAGCACCCAGGGCCTAGGGG...TTGCATTTGGGATTCTATGTCTTCCAAATTGAACCGTCTGTAATCAGTACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| 3UTR-3UTR CCA 90 bp | ACAAACCACAAACAACCGGCCTGCCCCAGTGCAGCATGGACAAGGGACTTGAAAATGGCTGAGGTTTTGTaGTGTCTGGTGCAGAGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: TNHKQPACPSAAWTRDLKMAEVL*CLVQRH Trigger: GTGCCTCTGCACCAGACACCACAAAACCTCAGCCAT...TTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| 3UTR-3UTR CCA 90 bp | ATATCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATCTAGGCCCTGGGTGCTaGGCACAGCCCACCCCTCGC | + |
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Preference number: 2 (lower is better) Translates to: ISICILIENYSPLGGCTDLGPGC*AQPTPR Trigger: GCGAGGGGTGGGCTGTGCCCAGCACCCAGGGCCTAG...ATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| 3UTR-3UTR CCA 90 bp | TCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTACCTGTCTATGGAGCTGTaGCTGGTAGGACAAACCACA | + |
|
Preference number: 2 (lower is better) Translates to: SICILIENYSPLGGCTDYLSMEL*LVGQTT Trigger: TGTGGTTTGTCCTACCAGCCACAGCTCCATAGACAG...GTAATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| 3UTR GCA 72 bp | TTTTGTGGTGTCTGGTGCAGAGGCACTAGGGAGAATTaGCCCCTAGGCCCTGGGTGCTGGGCACAGCCCACC | + |
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Preference number: 3 (lower is better) Translates to: FCGVWCRGTREN*PLGPGCWAQPT Trigger: GGTGGGCTGTGCCCAGCACCCAGGGCCTAGGGGGCAATTCTCCCTAGTGCCTCTGCACCAGACACCACAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| 3UTR GCA 72 bp | TCGGCGGCAGCATGGCTGAGGTTTTGTGGTGTCTGGTaGAGAGGCACTAGGGAGAATTGCCCCCTAGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: SAAAWLRFCGVW*RGTRENCPLGP Trigger: AGGGCCTAGGGGGCAATTCTCCCTAGTGCCTCTGCACCAGACACCACAAAACCTCAGCCATGCTGCCGCCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| 3UTR CCA 72 bp | CCTTCGGCGGCAGCATGGCTGAGGTTTTGTGGTGTCTaGTGCAGAGGCACTAGGGAGAATTGCCCCCTAGGC | + |
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Preference number: 3 (lower is better) Translates to: PSAAAWLRFCGV*CRGTRENCPLG Trigger: GCCTAGGGGGCAATTCTCCCTAGTGCCTCTGCACCAGACACCACAAAACCTCAGCCATGCTGCCGCCGAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| 3UTR CCA 72 bp | CTTTTGCTCTACTGCCAGCTGCTGTCTATGGAGCTGTaGCTGGTAGGACAAACCACAAACAACCGGCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLLYCQLLSMEL*LVGQTTNNRPA Trigger: GGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATAGACAGCAGCTGGCAGTAGAGCAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| 3UTR CCA 72 bp | ACAAACCACAAACAACCGGCCTGCCCCAGTGCAGCATaGACAAGGGACTTGAAACCAGAGCCCTTTAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: TNHKQPACPSAA*TRDLKPEPFNL Trigger: CAGGTTAAAGGGCTCTGGTTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| 3UTR TCA 72 bp | AACCGGCCTGCCCCAGTGCAGCATGGACAAGGGACTTaGAACCAGAGCCCTTTAACCTGTCTGTATAAAACC | + |
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Preference number: 3 (lower is better) Translates to: NRPAPVQHGQGT*NQSPLTCLYKT Trigger: GGTTTTATACAGACAGGTTAAAGGGCTCTGGTTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR TCA 90 bp | GGTGTCTGGTGCAGAGGCACTAGGGAGAATTGCCCCCTAGGCCCTGGGTGCTGGCTGTGGGTGCTGAGGTaGCAGAGAGGGGCAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVWCRGTRENCPLGPGCWLWVLR*QRGAVP Trigger: TGGCACTGCCCCTCTCTGTCACCTCAGCACCCACAG...CCAGCACCCAGGGCCTAGGGGGCAATTCTCCCTAGTGCCTCTGCACCAGACACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR TCA 90 bp | TATGGAGCTGTGGCTGGTAGGACAAACCACAAACAACCGGCCTGCCCCAGTGCACTTGGAGGGTGCAGCTaGCTTCCCCTTGGGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: YGAVAGRTNHKQPACPSALGGCS*LPLGGH Trigger: GTGGCCCCCAAGGGGAAGTCAGCTGCACCCTCCAAG...TGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR CCA 90 bp | GGTGTCTGGTGCAGAGGCACTAGGGAGAATTGCCCCCTAGGCCCTGGGTGCTGGGCCGAGAGCAGCTCTTaGAGGCTTTTAGTGGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: GVWCRGTRENCPLGPGCWAESSS*RLLVEA Trigger: TGCCTCCACTAAAAGCCTCCAAGAGCTGCTCTCGGC...CCAGCACCCAGGGCCTAGGGGGCAATTCTCCCTAGTGCCTCTGCACCAGACACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR TCA 90 bp | TATGGAGCTGTGGCTGGTAGGACAAACCACAAACAACCGGCCTGCCCCAGTGCACACAGCTGTGGGTGCTaGGGTGACAGAGAGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YGAVAGRTNHKQPACPSAHSCGC*GDREGQ Trigger: CTGCCCCTCTCTGTCACCTCAGCACCCACAGCTGTG...TGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR CCA 90 bp | GGTGTCTGGTGCAGAGGCACTAGGGAGAATTGCCCCCTAGGCCCTGGGTGCTGGTTGGACAGGCGCATCTaGCCCTTCTCTATCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVWCRGTRENCPLGPGCWLDRRI*PFSIFS Trigger: GGAGAAGATAGAGAAGGGCCAGATGCGCCTGTCCAA...CCAGCACCCAGGGCCTAGGGGGCAATTCTCCCTAGTGCCTCTGCACCAGACACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR GCA 90 bp | TCTATGGAGCTGTGGCTGGTAGGACAAACCACAAACAACCGGCCTGCCCCAGTGATGTCTTCTCCGCCTTaGCGCCACTTCCATCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SMELWLVGQTTNNRPAPVMSSPP*RHFHPG Trigger: GCCAGGATGGAAGTGGCGGCAAGGCGGAGAAGACAT...CACTGGGGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR GCA 90 bp | TATGGAGCTGTGGCTGGTAGGACAAACCACAAACAACCGGCCTGCCCCAGTGCAGGCAGCCCTTGCACATaGTCCTGTTGGACTTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: YGAVAGRTNHKQPACPSAGSPCT*SCWTWR Trigger: ACGCCAAGTCCAACAGGAGCATGTGCAAGGGCTGCC...TGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR GCA 90 bp | CAACTTTTGCTCTACTGCCAGCTGCTGTCTATGGAGCTGTGGCTGGTAGGACAAGGGCAGTGCCAGTGGTaGTGGGGCGCTGCTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QLLLYCQLLSMELWLVGQGQCQW*WGAAFW Trigger: CCAGAAAGCAGCGCCCCAGCACCACTGGCACTGCCC...TTGTCCTACCAGCCACAGCTCCATAGACAGCAGCTGGCAGTAGAGCAAAAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR GCA 90 bp | CACAAACAACCGGCCTGCCCCAGTGCAGCATGGACAAGGGACTTGAAACCAGAGGCTATCCGCAGACCCTaGGACAGGATGCCAGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: HKQPACPSAAWTRDLKPEAIRRP*DRMPAK Trigger: CTTTGCTGGCATCCTGTCGCAGGGTCTGCGGATAGC...CTCTGGTTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR GCA 90 bp | TCTTCTCCAGGCAGCCCTTGCACATGCTCCTGTTGGACTTGGCGTACTCCGCTATCGAACATGGGTGACTaGACCATGATGGCCATGCGG | + |
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Preference number: 4 (lower is better) Translates to: SSPGSPCTCSCWTWRTPLSNMGD*TMMAMR Trigger: CCGCATGGCCATCATGGTGCAGTCACCCATGTTCGA...TAGCGGAGTACGCCAAGTCCAACAGGAGCATGTGCAAGGGCTGCCTGGAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194608.2 |
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| CDS-3UTR GCA 90 bp | CCACAAACAACCGGCCTGCCCCAGTGCAGCATGGACAAGGGACTTGAAACCAGATCTCCTGACGGCACCTaGTGCTGGTTGAAGATGAGC | + |
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Preference number: 4 (lower is better) Translates to: PQTTGLPQCSMDKGLETRSPDGT*CWLKMS Trigger: GCTCATCTTCAACCAGCAGCAGGTGCCGTCAGGAGA...TCTGGTTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR TCA 90 bp | ACAAACCACAAACAACCGGCCTGCCCCAGTGCAGCATGGACAAGGGACTTGAAAGATTCACTGCTGCCTTaGGACACTGCCTGCTGGACC | + |
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Preference number: 4 (lower is better) Translates to: TNHKQPACPSAAWTRDLKDSLLP*DTACWT Trigger: GGTCCAGCAGGCAGTGTCTCAAGGCAGCAGTGAATC...TTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR GCA 90 bp | CAACTTTTGCTCTACTGCCAGCTGCTGTCTATGGAGCTGTGGCTGGTAGGACAAGGCCTGAACACTCCTTaGAGGGCAGAAGGGCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: QLLLYCQLLSMELWLVGQGLNTP*RAEGPQ Trigger: TTGGGGCCCTTCTGCCCTGCAAGGAGTGTTCAGGCC...TTGTCCTACCAGCCACAGCTCCATAGACAGCAGCTGGCAGTAGAGCAAAAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR TCA 90 bp | TCTCTATCTTCTCCAGGCAGCCCTTGCACATGCTCCTGTTGGACTTGGCGTACTCCCATCGAACATGGGTaGCTGCACCATGATGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SLSSPGSPCTCSCWTWRTPIEHG*LHHDGH Trigger: ATGGCCATCATGGTGCAGTCACCCATGTTCGATGGG...AGTACGCCAAGTCCAACAGGAGCATGTGCAAGGGCTGCCTGGAGAAGATAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194608.2 |
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| CDS-3UTR GCA 90 bp | TATGGAGCTGTGGCTGGTAGGACAAACCACAAACAACCGGCCTGCCCCAGTGCACGTCAGCTTCTTTACTaGCTCTTCGTCCTGGCCATA | + |
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Preference number: 4 (lower is better) Translates to: YGAVAGRTNHKQPACPSARQLLY*LFVLAI Trigger: TATGGCCAGGACGAAGAGGCAGTAAAGAAGCTGACG...TGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR CCA 90 bp | TATGGAGCTGTGGCTGGTAGGACAAACCACAAACAACCGGCCTGCCCCAGTGCACAACAGCGTCCTCTTTaGAGGGCATCTGCTCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: YGAVAGRTNHKQPACPSAQQRPL*RASAQV Trigger: AACTTGAGCAGATGCCCTCCAAAGAGGACGCTGTTG...TGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR CCA 90 bp | TATGGAGCTGTGGCTGGTAGGACAAACCACAAACAACCGGCCTGCCCCAGTGCATGCTCCTGTTGGACTTaGCGTACTCCGCTAAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: YGAVAGRTNHKQPACPSACSCWT*RTPLKS Trigger: ACTTTTTAGCGGAGTACGCCAAGTCCAACAGGAGCA...TGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR CCA 90 bp | CAACTTTTGCTCTACTGCCAGCTGCTGTCTATGGAGCTGTGGCTGGTAGGACAACACCCTTGCTCTTCTTaGAGGGTGCAGCTGACTTCC | + |
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Preference number: 4 (lower is better) Translates to: QLLLYCQLLSMELWLVGQHPCSS*RVQLTS Trigger: GGAAGTCAGCTGCACCCTCCAAGAAGAGCAAGGGTG...TTGTCCTACCAGCCACAGCTCCATAGACAGCAGCTGGCAGTAGAGCAAAAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR GCA 90 bp | CCACAAACAACCGGCCTGCCCCAGTGCAGCATGGACAAGGGACTTGAAACCAGACAGATCCTGTCAACTTaGCTCCGAGTTTCTCAATCA | + |
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Preference number: 4 (lower is better) Translates to: PQTTGLPQCSMDKGLETRQILST*LRVSQS Trigger: TGATTGAGAAACTCGGAGGCAAGTTGACAGGATCTG...TCTGGTTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR GCA 90 bp | CAACTTTTGCTCTACTGCCAGCTGCTGTCTATGGAGCTGTGGCTGGTAGGACAAGGAAGATCCAGTACCTaGTCTCCTTGTCGTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: QLLLYCQLLSMELWLVGQGRSST*SPCRPP Trigger: TGGAGGACGACAAGGAGAGCAGGTACTGGATCTTCC...TTGTCCTACCAGCCACAGCTCCATAGACAGCAGCTGGCAGTAGAGCAAAAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR CCA 90 bp | CAACTTTTGCTCTACTGCCAGCTGCTGTCTATGGAGCTGTGGCTGGTAGGACAAGCTTCGTCCTTGTTCTaGGAGAGCTTCCCAAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: QLLLYCQLLSMELWLVGQASSLF*ESFPRV Trigger: GACTCTTGGGAAGCTCTCCCAGAACAAGGACGAAGC...TTGTCCTACCAGCCACAGCTCCATAGACAGCAGCTGGCAGTAGAGCAAAAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR GCA 90 bp | ACAAACCACAAACAACCGGCCTGCCCCAGTGCAGCATGGACAAGGGACTTGAAAAGCTTCTTTGTCTTCTaGAGAGAGGAGGCTAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: TNHKQPACPSAAWTRDLKSFFVF*REEAKA Trigger: GGCTTTAGCCTCCTCTCTGCAGAAGACAAAGAAGCT...TTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR CCA 90 bp | CAACTTTTGCTCTACTGCCAGCTGCTGTCTATGGAGCTGTGGCTGGTAGGACAACTCTTAAAGACCAGCTaGCCTGAACACTCCTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QLLLYCQLLSMELWLVGQLLKTS*PEHSLQ Trigger: CTGCAAGGAGTGTTCAGGCCAGCTGGTCTTTAAGAG...TTGTCCTACCAGCCACAGCTCCATAGACAGCAGCTGGCAGTAGAGCAAAAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR CCA 90 bp | TCTATGGAGCTGTGGCTGGTAGGACAAACCACAAACAACCGGCCTGCCCCAGTGAGTAGTTTGCACTTTTaGACACCATGTCGGCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: SMELWLVGQTTNNRPAPVSSLHF*TPCRQS Trigger: ACTTTGCCGACATGGTGTCCAAAAGTGCAAACTACT...CACTGGGGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR GCA 90 bp | TCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTACATCCTGGCCTTTGCCTaGCACGCCTCCAGCCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: SICILIENYSPLGGCTDYILAFA*HASSLG Trigger: GCCGAGGCTGGAGGCGTGGCAGGCAAAGGCCAGGAT...GTAATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR GCA 90 bp | TCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTACGACAGAGAGGGGCAGTaGCAGTGGTGCTGGGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: SICILIENYSPLGGCTDYDREGQ*QWCWGA Trigger: AGCGCCCCAGCACCACTGGCACTGCCCCTCTCTGTC...GTAATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR CCA 90 bp | GGCTGTACTGATTACAGACGGTTCAATTTGGAAGACATAGAATCCCAAATGCAACCGCCACTTCCATCCTaGCCTTTGCCTGCCACGCCT | + |
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Preference number: 4 (lower is better) Translates to: GCTDYRRFNLEDIESQMQPPLPS*PLPATP Trigger: AGGCGTGGCAGGCAAAGGCCAGGATGGAAGTGGCGG...TTGCATTTGGGATTCTATGTCTTCCAAATTGAACCGTCTGTAATCAGTACAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR TCA 90 bp | ACAAACCACAAACAACCGGCCTGCCCCAGTGCAGCATGGACAAGGGACTTGAAATCTTCAGCTCGTCTTTaGTATTCCAGATCAGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: TNHKQPACPSAAWTRDLKSSARL*YSRSAH Trigger: ATGAGCTGATCTGGAATATCAAAGACGAGCTGAAGA...TTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR TCA 90 bp | CACAAACAACCGGCCTGCCCCAGTGCAGCATGGACAAGGGACTTGAAACCAGAGTATGTGAAGCATGCTTaGGTTCATACATGTTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: HKQPACPSAAWTRDLKPEYVKHA*VHTCFQ Trigger: TTGGAAACATGTATGAACTCAAGCATGCTTCACATA...CTCTGGTTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR GCA 90 bp | CAACTTTTGCTCTACTGCCAGCTGCTGTCTATGGAGCTGTGGCTGGTAGGACAATACAGCTTCATGAAGTaGTCAACAGCGTCCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QLLLYCQLLSMELWLVGQYSFMK*STASSL Trigger: CAAAGAGGACGCTGTTGAGCACTTCATGAAGCTGTA...TTGTCCTACCAGCCACAGCTCCATAGACAGCAGCTGGCAGTAGAGCAAAAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR GCA 90 bp | TCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTACGCTGCCTTGAGACACTaGCTGCTGGACCTCGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SICILIENYSPLGGCTDYAALRH*LLDLAE Trigger: CTCAGCGAGGTCCAGCAGGCAGTGTCTCAAGGCAGC...GTAATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CCA 90 bp | CAACTTTTGCTCTACTGCCAGCTGCTGTCTATGGAGCTGTGGCTGGTAGGACAAACAAAGCAAGTTGGATaGTACCAGCGGTCAATCATA | + |
|
Preference number: 4 (lower is better) Translates to: QLLLYCQLLSMELWLVGQTKQVG*YQRSII Trigger: TATGATTGACCGCTGGTACCATCCAACTTGCTTTGT...TTGTCCTACCAGCCACAGCTCCATAGACAGCAGCTGGCAGTAGAGCAAAAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CCA 90 bp | GGCTGTACTGATTACAGACGGTTCAATTTGGAAGACATAGAATCCCAAATGCAACAGGGGCTTGTCTGCTaGAGCAGAGGAGTTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GCTDYRRFNLEDIESQMQQGLVC*SRGVHS Trigger: GCTGTGAACTCCTCTGCTCCAGCAGACAAGCCCCTG...TTGCATTTGGGATTCTATGTCTTCCAAATTGAACCGTCTGTAATCAGTACAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CCA 90 bp | GGCTGTACTGATTACAGACGGTTCAATTTGGAAGACATAGAATCCCAAATGCAATCGGCAGCTTCGACTTaGTGCCAGGCTTCACCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GCTDYRRFNLEDIESQMQSAAST*CQASPS Trigger: TGACGGTGAAGCCTGGCACCAAGTCGAAGCTGCCGA...TTGCATTTGGGATTCTATGTCTTCCAAATTGAACCGTCTGTAATCAGTACAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR TCA 90 bp | TCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTACCCTCGGCCGTCTTCTTaGCCTTCTGCTGATCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SICILIENYSPLGGCTDYPRPSS*PSADHP Trigger: GGGATGATCAGCAGAAGGTCAAGAAGACGGCCGAGG...GTAATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR TCA 90 bp | ATATCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATGGTTGTGAAGCTGCCTaGAGGGCTTGTAGCGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISICILIENYSPLGGCTDGCEAA*RACSAG Trigger: GCCAGCGCTACAAGCCCTTCAGGCAGCTTCACAACC...ATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR GCA 90 bp | GGCTGTACTGATTACAGACGGTTCAATTTGGAAGACATAGAATCCCAAATGCAATCGAACATGGGTGACTaGACCATGATGGCCATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GCTDYRRFNLEDIESQMQSNMGD*TMMAMR Trigger: CCGCATGGCCATCATGGTGCAGTCACCCATGTTCGA...TTGCATTTGGGATTCTATGTCTTCCAAATTGAACCGTCTGTAATCAGTACAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR GCA 90 bp | GGCTGTACTGATTACAGACGGTTCAATTTGGAAGACATAGAATCCCAAATGCAAAGACAGGGGCTTGTCTaGTGGAGCAGAGGAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GCTDYRRFNLEDIESQMQRQGLV*WSRGVH Trigger: GTGAACTCCTCTGCTCCAGCAGACAAGCCCCTGTCT...TTGCATTTGGGATTCTATGTCTTCCAAATTGAACCGTCTGTAATCAGTACAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR GCA 90 bp | ATATCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATCGATGGGATCCTTGCTaGTGTCGTCAGAGCCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISICILIENYSPLGGCTDRWDPC*CRQSHP Trigger: GGGGTGGCTCTGACGACAGCAGCAAGGATCCCATCG...ATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR TCA 90 bp | TCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTACCCCATCGAACATGGGTaGCTGCACCATGATGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SICILIENYSPLGGCTDYPIEHG*LHHDGH Trigger: ATGGCCATCATGGTGCAGTCACCCATGTTCGATGGG...GTAATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR TCA 90 bp | ATATCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATAAAGACCAGCTGGCCTaGACACTCCTTGCAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISICILIENYSPLGGCTDKDQLA*TLLAGQ Trigger: CTGCCCTGCAAGGAGTGTTCAGGCCAGCTGGTCTTT...ATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR GCA 90 bp | ATATCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATCCTGACGGCACCTGCTaGTGGTTGAAGATGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISICILIENYSPLGGCTDPDGTC*WLKMSS Trigger: GCTGCTCATCTTCAACCAGCAGCAGGTGCCGTCAGG...ATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CCA 90 bp | TCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTACTGGGGCGCTGCTTTCTaGAGGGAATATTCGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SICILIENYSPLGGCTDYWGAAF*REYSVL Trigger: CAGGACCGAATATTCCCTCCAGAAAGCAGCGCCCCA...GTAATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CCA 90 bp | GGCTGTACTGATTACAGACGGTTCAATTTGGAAGACATAGAATCCCAAATGCAAGCTCCTTCAGGTCGTTaGTGGAACACGCTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GCTDYRRFNLEDIESQMQAPSGR*WNTLSS Trigger: TGAAGAAAGCGTGTTCCACCAACGACCTGAAGGAGC...TTGCATTTGGGATTCTATGTCTTCCAAATTGAACCGTCTGTAATCAGTACAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CCA 90 bp | ATATCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATCCCAAGGGCATCTTCTaGAGGTCAATCTCGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISICILIENYSPLGGCTDPKGIF*RSISYS Trigger: GGAGTACGAGATTGACCTCCAGAAGATGCCCTTGGG...ATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR TCA 90 bp | TCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTACCTTCATACAGCTTCATaGAGTGCTCAACAGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SICILIENYSPLGGCTDYLHTAS*SAQQRP Trigger: AGGACGCTGTTGAGCACTTCATGAAGCTGTATGAAG...GTAATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR GCA 90 bp | TCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTACTCTTTGGAGGGCATCTaGTCAAGTTTGTTACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SICILIENYSPLGGCTDYSLEGI*SSLLLP Trigger: CGGCAGTAACAAACTTGAGCAGATGCCCTCCAAAGA...GTAATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR GCA 90 bp | TCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTACCCAAGGCCTTTTTCATaGTCTCCACGTCGAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SICILIENYSPLGGCTDYPRPFS*SPRRRS Trigger: TGATCTTCGACGTGGAGAGCATGAAAAAGGCCTTGG...GTAATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CCA 90 bp | ATATCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATACAAGGAGGCCTTGTTaGCAGATCCTGTCAACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISICILIENYSPLGGCTDTRRPC*QILSTC Trigger: GCAAGTTGACAGGATCTGCCAACAAGGCCTCCTTGT...ATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR GCA 90 bp | TCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTACTGTGTGGCAGTAGTTTaGACTTTTGGACACCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SICILIENYSPLGGCTDYCVAVV*TFGHHV Trigger: GACATGGTGTCCAAAAGTGCAAACTACTGCCACACA...GTAATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027777.12 ENSMUST00000195560.2 |
||
| CDS-3UTR GCA 90 bp | ATATCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTGTGTGGCAGTAGTTTaGACTTTTGGACACCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISICILIENYSPLGGCTDCVAVV*TFGHHV Trigger: GACATGGTGTCCAAAAGTGCAAACTACTGCCACACA...ATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027777.12 ENSMUST00000195560.2 |
||
| CDS-3UTR CCA 90 bp | TCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTACTTCTCGGAATTCCTTTaGAGTTACCCATTCCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SICILIENYSPLGGCTDYFSEFL*SYPFLS Trigger: CGAAAGGAATGGGTAACTCCAAAGGAATTCCGAGAA...GTAATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| 3UTR CAA 72 bp | ATATCCATTTGCATTTTAATTGAGAACTATAGCCCTTaGGGTGGCTGTACTGATTACAGACGGTTCAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISICILIENYSP*GGCTDYRRFNL Trigger: CAAATTGAACCGTCTGTAATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027777.12 ENSMUST00000195560.2 |
||
| CDS-3UTR TCA 90 bp | ATATCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTATGTGAAGCATGCTTaGGTTCATACATGTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISICILIENYSPLGGCTDYVKHA*VHTCFQ Trigger: TTGGAAACATGTATGAACTCAAGCATGCTTCACATA...ATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027777.12 ENSMUST00000195560.2 |
||
| CDS-3UTR CAA 90 bp | GGTGTCTGGTGCAGAGGCACTAGGGAGAATTGCCCCCTAGGCCCTGGGTGCTGGTGGCCTGAACACTCCTaGCAGGGCAGAAGGGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GVWCRGTRENCPLGPGCWWPEHS*QGRRAP Trigger: TGGGGCCCTTCTGCCCTGCAAGGAGTGTTCAGGCCA...CCAGCACCCAGGGCCTAGGGGGCAATTCTCCCTAGTGCCTCTGCACCAGACACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CAA 90 bp | GGTGTCTGGTGCAGAGGCACTAGGGAGAATTGCCCCCTAGGCCCTGGGTGCTGGGGCCGAGAGCAGCTCTaGGAGGCTTTTAGTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GVWCRGTRENCPLGPGCWGREQL*EAFSGG Trigger: GCCTCCACTAAAAGCCTCCAAGAGCTGCTCTCGGCC...CCAGCACCCAGGGCCTAGGGGGCAATTCTCCCTAGTGCCTCTGCACCAGACACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CAA 90 bp | GGTGTCTGGTGCAGAGGCACTAGGGAGAATTGCCCCCTAGGCCCTGGGTGCTGGGGATTCACTGCTGCCTaGAGACACTGCCTGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GVWCRGTRENCPLGPGCWGFTAA*RHCLLD Trigger: GTCCAGCAGGCAGTGTCTCAAGGCAGCAGTGAATCC...CCAGCACCCAGGGCCTAGGGGGCAATTCTCCCTAGTGCCTCTGCACCAGACACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS GCA 90 bp | GCTGGCCTGAACACTCCTTGCAGGGCAGAAGGGCCCCAAACGCCATaGCGTCAGCAACTCTGTCCAAGATCGCTGACTCTCCTGACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGLNTPCRAEGPQTP*RQQLCPRSLTLLTA Trigger: TGCCGTCAGGAGAGTCAGCGATCTTGGACAGAGTTGCTGACGGCATGGCGTTTGGGGCCCTTCTGCCCTGCAAGGAGTGTTCAGGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CAA 90 bp | CACAAACAACCGGCCTGCCCCAGTGCAGCATGGACAAGGGACTTGAAACCAGAGCTTCCATCCTGGCCTTaGCCTGCCACGCCTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HKQPACPSAAWTRDLKPELPSWP*PATPPA Trigger: GGCTGGAGGCGTGGCAGGCAAAGGCCAGGATGGAAG...CTCTGGTTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CAA 90 bp | GGTGTCTGGTGCAGAGGCACTAGGGAGAATTGCCCCCTAGGCCCTGGGTGCTGGCTCTTTCCTTCATTCTaGATGGCCGGGAGCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GVWCRGTRENCPLGPGCWLFPSF*MAGSCF Trigger: GAAGCAGCTCCCGGCCATCAAGAATGAAGGAAAGAG...CCAGCACCCAGGGCCTAGGGGGCAATTCTCCCTAGTGCCTCTGCACCAGACACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CAA 90 bp | GGTGTCTGGTGCAGAGGCACTAGGGAGAATTGCCCCCTAGGCCCTGGGTGCTGGTTCTTCAGAGCTTCTTaGTCTTCTGCAGAGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVWCRGTRENCPLGPGCWFFRAS*SSAERR Trigger: CCTCCTCTCTGCAGAAGACAAAGAAGCTCTGAAGAA...CCAGCACCCAGGGCCTAGGGGGCAATTCTCCCTAGTGCCTCTGCACCAGACACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CAA 90 bp | TATGGAGCTGTGGCTGGTAGGACAAACCACAAACAACCGGCCTGCCCCAGTGCAGCACCCTTGCTCTTCTaGGAGGGTGCAGCTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: YGAVAGRTNHKQPACPSAAPLLF*EGAADF Trigger: GAAGTCAGCTGCACCCTCCAAGAAGAGCAAGGGTGC...TGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CAA 90 bp | CCACAAACAACCGGCCTGCCCCAGTGCAGCATGGACAAGGGACTTGAAACCAGACAGTACCTGCTCTCCTaGTCGTCCTCCAGAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PQTTGLPQCSMDKGLETRQYLLS*SSSRSC Trigger: GCAGCTTCTGGAGGACGACAAGGAGAGCAGGTACTG...TCTGGTTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CAA 90 bp | TATGGAGCTGTGGCTGGTAGGACAAACCACAAACAACCGGCCTGCCCCAGTGCAAGCTCGTCCCGCTTCTaGACAAAGCAAGTTGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: YGAVAGRTNHKQPACPSASSSRF*TKQVGW Trigger: CCATCCAACTTGCTTTGTCAAGAAGCGGGACGAGCT...TGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CAA 90 bp | TCTATGGAGCTGTGGCTGGTAGGACAAACCACAAACAACCGGCCTGCCCCAGTGAGCTCCTTCAGGTCGTaGGTGGAACACGCTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SMELWLVGQTTNNRPAPVSSFRS*VEHAFF Trigger: GAAGAAAGCGTGTTCCACCAACGACCTGAAGGAGCT...CACTGGGGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CAA 90 bp | CACAAACAACCGGCCTGCCCCAGTGCAGCATGGACAAGGGACTTGAAACCAGAGGCTTTTGCTTCGTCCTaGTTCTGGGAGAGCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HKQPACPSAAWTRDLKPEAFASS*FWESFP Trigger: TGGGAAGCTCTCCCAGAACAAGGACGAAGCAAAAGC...CTCTGGTTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CAA 90 bp | CTCTATCTTCTCCAGGCAGCCCTTGCACATGCTCCTGTTGGACTTGGCGTACTCAATGTCTTCTCCGCCTaGCCGCCACTTCCAGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LYLLQAALAHAPVGLGVLNVFSA*PPLPEA Trigger: TGCTTCTGGAAGTGGCGGCAAGGCGGAGAAGACATT...GAGTACGCCAAGTCCAACAGGAGCATGTGCAAGGGCTGCCTGGAGAAGATAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194608.2 |
||
| CDS-3UTR CAA 90 bp | CAACTTTTGCTCTACTGCCAGCTGCTGTCTATGGAGCTGTGGCTGGTAGGACAAAATGTCTTCTCCGCCTaGCCGCCACTTCCATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QLLLYCQLLSMELWLVGQNVFSA*PPLPSW Trigger: CCAGGATGGAAGTGGCGGCAAGGCGGAGAAGACATT...TTGTCCTACCAGCCACAGCTCCATAGACAGCAGCTGGCAGTAGAGCAAAAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CAA 90 bp | TCTATGGAGCTGTGGCTGGTAGGACAAACCACAAACAACCGGCCTGCCCCAGTGCTAGGATTCTGTGTCTaGACCATGCACTTGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SMELWLVGQTTNNRPAPVLGFCV*TMHLVQ Trigger: CTGGACCAAGTGCATGGTCAAGACACAGAATCCTAG...CACTGGGGCAGGCCGGTTGTTTGTGGTTTGTCCTACCAGCCACAGCTCCATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CAA 90 bp | ACAAACCACAAACAACCGGCCTGCCCCAGTGCAGCATGGACAAGGGACTTGAAATCGATGTCCAGGAGGTaGTCTAGCATCTCCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TNHKQPACPSAAWTRDLKSMSRR*SSISTL Trigger: CAAGGTGGAGATGCTAGACAACCTCCTGGACATCGA...TTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCCGGTTGTTTGTGGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CAA 90 bp | CAACTTTTGCTCTACTGCCAGCTGCTGTCTATGGAGCTGTGGCTGGTAGGACAAGCAGATCCTGTCAACTaGCCTCCGAGTTTCTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: QLLLYCQLLSMELWLVGQADPVN*PPSFSI Trigger: GATTGAGAAACTCGGAGGCAAGTTGACAGGATCTGC...TTGTCCTACCAGCCACAGCTCCATAGACAGCAGCTGGCAGTAGAGCAAAAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS GCA 90 bp | GAGTGCCAGGCATTCCCAGTCTTCTCTTCATACAGCTTCATGAAGTaGTCAACAGCGTCCTCTTTGGAGGGCATCTGCTCAAGTTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: ECQAFPVFSSYSFMK*STASSLEGICSSLL Trigger: TAACAAACTTGAGCAGATGCCCTCCAAAGAGGACGCTGTTGAGCACTTCATGAAGCTGTATGAAGAGAAGACTGGGAATGCCTGGCACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CAA 90 bp | TCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTACACGTCGATGGGATCCTaGCTGCTGTCGTCAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SICILIENYSPLGGCTDYTSMGS*LLSSEP Trigger: TGGCTCTGACGACAGCAGCAAGGATCCCATCGACGT...GTAATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
||
| CDS-3UTR CAA 90 bp | ATATCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATGGCACCTGCTGCTGGTaGAAGATGAGCAGCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ISICILIENYSPLGGCTDGTCCW*KMSSSF Trigger: GAAGGAGCTGCTCATCTTCAACCAGCAGCAGGTGCC...ATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR CAA 90 bp | TCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTACATGTTAGACAGGGGCTaGTCTGCTGGAGCAGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: SICILIENYSPLGGCTDYMLDRG*SAGAEE Trigger: CTCCTCTGCTCCAGCAGACAAGCCCCTGTCTAACAT...GTAATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR CAA 90 bp | ATATCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATTTGACACCTTCCTCCTaGACAGCACCCTTGCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: ISICILIENYSPLGGCTDLTPSS*TAPLLF Trigger: GAAGAGCAAGGGTGCTGTCAAGGAGGAAGGTGTCAA...ATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR CAA 90 bp | ATATCCATTTGCATTTTAATTGAGAACTATAGCCCTTTGGGTGGCTGTACTGATGGCATCTGCTCAAGTTaGTTACTGCCGATAACTGTG | + |
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Preference number: 5 (lower is better) Translates to: ISICILIENYSPLGGCTDGICSS*LLPITV Trigger: CACAGTTATCGGCAGTAACAAACTTGAGCAGATGCC...ATCAGTACAGCCACCCAAAGGGCTATAGTTCTCAATTAAAATGCAAATGGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS-3UTR CAA 90 bp | GGCTGTACTGATTACAGACGGTTCAATTTGGAAGACATAGAATCCCAAATGCAAATTCGGTCCTGTTTTTaGACCTTTAACTTCTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GCTDYRRFNLEDIESQMQIRSCF*TFNFLR Trigger: CCTCAAGAAGTTAAAGGTCAAAAAACAGGACCGAAT...TTGCATTTGGGATTCTATGTCTTCCAAATTGAACCGTCTGTAATCAGTACAGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS CCA 72 bp | CCCAATGTCTTCTCCGCCTTGCCGCCACTTCCATCCTaGCCTTTGCCTGCCACGCCTCCAGCCTCGGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: PNVFSALPPLPS*PLPATPPASAV Trigger: GACGGCCGAGGCTGGAGGCGTGGCAGGCAAAGGCCAGGATGGAAGTGGCGGCAAGGCGGAGAAGACATTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS TCA 72 bp | CTTTGCCTGCCACGCCTCCAGCCTCGGCCGTCTTCTTaGCCTTCTGCTGATCATCCCAGCGCAGCTCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: LCLPRLQPRPSS*PSADHPSAAQR Trigger: TCTCTGAGCTGCGCTGGGATGATCAGCAGAAGGTCAAGAAGACGGCCGAGGCTGGAGGCGTGGCAGGCAAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027777.12 ENSMUST00000194434.2 |
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| CDS CCA 72 bp | GGTGTCGTTGACACCAGATGGGATCCCTGTTCCCAGTaGAACCTCTACACCCTCCAGGGTGATGCTGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: GVVDTRWDPCSQ*NLYTLQGDAGR Trigger: TCGGCCAGCATCACCCTGGAGGGTGTAGAGGTTCCACTGGGAACAGGGATCCCATCTGGTGTCAACGACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027777.12 ENSMUST00000195560.2 |
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| CDS TCA 72 bp | CGATGGGATCCTTGCTGCTGTCGTCAGAGCCACCCCTaGGAAGACTATAGGCCACCTCGATGTCCAGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: RWDPCCCRQSHP*EDYRPPRCPGG Trigger: ACCTCCTGGACATCGAGGTGGCCTATAGTCTTCTCAGGGGTGGCTCTGACGACAGCAGCAAGGATCCCATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS GCA 72 bp | AACACTCCTTGCAGGGCAGAAGGGCCCCAAACGCCATaGCGTCAGCAACTCTGTCCAAGATCGCTGACTCTC | + |
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Preference number: 6 (lower is better) Translates to: NTPCRAEGPQTP*RQQLCPRSLTL Trigger: GAGAGTCAGCGATCTTGGACAGAGTTGCTGACGGCATGGCGTTTGGGGCCCTTCTGCCCTGCAAGGAGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS CAA 90 bp | ATGAAGTGCTCAACAGCGTCCTCTTTGGAGGGCATCTGCTCAAGTTaGTTACTGCCGATAACTGTGCCCACCCGGCCCCAGGACCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: MKCSTASSLEGICSS*LLPITVPTRPQDRK Trigger: CTTCCGGTCCTGGGGCCGGGTGGGCACAGTTATCGGCAGTAACAAACTTGAGCAGATGCCCTCCAAAGAGGACGCTGTTGAGCACTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS CAA 72 bp | TCAACAGCGTCCTCTTTGGAGGGCATCTGCTCAAGTTaGTTACTGCCGATAACTGTGCCCACCCGGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: STASSLEGICSS*LLPITVPTRPQ Trigger: CTGGGGCCGGGTGGGCACAGTTATCGGCAGTAACAAACTTGAGCAGATGCCCTCCAAAGAGGACGCTGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS TCA 72 bp | TTGGAGAGATCTAGGATCTGGGATTCACTGCTGCCTTaGGACACTGCCTGCTGGACCTCGCTGAGGATAGAG | + |
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Preference number: 6 (lower is better) Translates to: LERSRIWDSLLP*DTACWTSLRIE Trigger: CTCTATCCTCAGCGAGGTCCAGCAGGCAGTGTCTCAAGGCAGCAGTGAATCCCAGATCCTAGATCTCTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS TCA 72 bp | GCTTGTAGCGCTGGCTCTCCCCCTCGCGCTCTATCTTaGAGATATCGATCACTTCCAGGTCATAGGCGTTGT | + |
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Preference number: 6 (lower is better) Translates to: ACSAGSPPRALS*RYRSLPGHRRC Trigger: ACAACGCCTATGACCTGGAAGTGATCGATATCTTCAAGATAGAGCGCGAGGGGGAGAGCCAGCGCTACAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS CCA 72 bp | CTCATTATACAGCAGGCAGGTGTCGTTGACACCAGATaGGATCCCTGTTCCCAGTGGAACCTCTACACCCTC | + |
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Preference number: 6 (lower is better) Translates to: LIIQQAGVVDTR*DPCSQWNLYTL Trigger: GAGGGTGTAGAGGTTCCACTGGGAACAGGGATCCCATCTGGTGTCAACGACACCTGCCTGCTGTATAATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027777.12 ENSMUST00000195560.2 |
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| CDS TCA 72 bp | GCCAGGCATTCCCAGTCTTCTCTTCATACAGCTTCATaGAGTGCTCAACAGCGTCCTCTTTGGAGGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: ARHSQSSLHTAS*SAQQRPLWRAS Trigger: AGATGCCCTCCAAAGAGGACGCTGTTGAGCACTTCATGAAGCTGTATGAAGAGAAGACTGGGAATGCCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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| CDS GCA 72 bp | GCATTCCCAGTCTTCTCTTCATACAGCTTCATGAAGTaGTCAACAGCGTCCTCTTTGGAGGGCATCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: AFPVFSSYSFMK*STASSLEGICS Trigger: TGAGCAGATGCCCTCCAAAGAGGACGCTGTTGAGCACTTCATGAAGCTGTATGAAGAGAAGACTGGGAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027777.12 |
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