Pregenerated sensors for PARN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022685Ensembl transcript IDs: ENSMUST00000058884.10, ENSMUST00000229042.2, ENSMUST00000231003.2
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAGGTCCGCAGGCAGGGGGCAGTAGAACTGATGAATCGTATGCATaGCATCCAAGAGCATGTTGTGTCCCACAACCAGCTTCCCCGAAT | + |
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Preference number: 1 (lower is better) Translates to: SGPQAGGSRTDESYA*HPRACCVPQPASPN Trigger: ATTCGGGGAAGCTGGTTGTGGGACACAACATGCTCTTGGATGTCATGCATACGATTCATCAGTTCTACTGCCCCCTGCCTGCGGACCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR GCA 90 bp | TGGATTGGCTCCTCCACTTCCTATCTGCTAATGCCAGGTGCCTCCTaGTCTAGCCACACAGGCAGAAACACGCATACCATCATGCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: WIGSSTSYLLMPGAS*SSHTGRNTHTIMLE Trigger: TTCCAGCATGATGGTATGCGTGTTTCTGCCTGTGTGGCTAGAGCAGGAGGCACCTGGCATTAGCAGATAGGAAGTGGAGGAGCCAATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR CCA 90 bp | CCTCCTGCTCTAGCCACACAGGCAGAAACACGCATACCATCATGCTaGAACTCCTCAGAAACCATGAGCCCCAACCAATCCTTCTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: PPALATQAETRIPSC*NSSETMSPNQSFFP Trigger: AGGGAAGAAGGATTGGTTGGGGCTCATGGTTTCTGAGGAGTTCCAGCATGATGGTATGCGTGTTTCTGCCTGTGTGGCTAGAGCAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR CCA 90 bp | GCCAGAATCAGGTCTCTGAGGGTTAAACCCACCCTGATTCTGATCTaGATTGGCTCCTCCACTTCCTATCTGCTAATGCCAGGTGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: ARIRSLRVKPTLILI*IGSSTSYLLMPGAS Trigger: GGAGGCACCTGGCATTAGCAGATAGGAAGTGGAGGAGCCAATCCAGATCAGAATCAGGGTGGGTTTAACCCTCAGAGACCTGATTCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR GCA 90 bp | GCTGGCCATCAACTTAGTATCCAAGAGTCTGGGGAAGACACATATTaGCATCTCCTTAAACTCATTCAGGTCCGCAGGCAGGGGGCAGTA | + |
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Preference number: 1 (lower is better) Translates to: AGHQLSIQESGEDTY*HLLKLIQVRRQGAV Trigger: TACTGCCCCCTGCCTGCGGACCTGAATGAGTTTAAGGAGATGGCAATATGTGTCTTCCCCAGACTCTTGGATACTAAGTTGATGGCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR CCA 90 bp | ATCGTACCCCGCCTCATGAAGCTGCTCAGAAGCTGTGTCGTAGCTTaGAAAGCCTTCTGCACTTTCAACTTTGGGAGGGTCAAAAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: IVPRLMKLLRSCVVA*KAFCTFNFGRVKRC Trigger: ACACCTTTTGACCCTCCCAAAGTTGAAAGTGCAGAAGGCTTTCCAAGCTACGACACAGCTTCTGAGCAGCTTCATGAGGCGGGGTACGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR TCA 90 bp | TCCCACAACCAGCTTCCCCGAATTAGCAATGGCATGGATGACTCTTaGAAACCCCACAGCATCATTCAGCTCCTCCTGCTCCTTTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: SHNQLPRISNGMDDS*KPHSIIQLLLLLCV Trigger: TACACAAAGGAGCAGGAGGAGCTGAATGATGCTGTGGGGTTTTCAAGAGTCATCCATGCCATTGCTAATTCGGGGAAGCTGGTTGTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR TCA 90 bp | GCTTTCTGTCCACCTCCTTCCAACTGTCTTCTGTCCACTTCCTCTTaGCCTGCTTGCCTTTCTGCTTCTTTCCCACATACTCAGCATAGG | + |
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Preference number: 1 (lower is better) Translates to: AFCPPPSNCLLSTSS*PACLSASFPHTQHR Trigger: CCTATGCTGAGTATGTGGGAAAGAAGCAGAAAGGCAAGCAGGTCAAGAGGAAGTGGACAGAAGACAGTTGGAAGGAGGTGGACAGAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR GCA 90 bp | CCAGATACAGACACACAAAGACATACAGTAAAAACCAGGAGAAGCTaGTGCACCGTGAACCCTGTGCGTAGGAACAGAAGAGCCAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: PDTDTQRHTVKTRRS*CTVNPVRRNRRASF Trigger: GAAGCTGGCTCTTCTGTTCCTACGCACAGGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGTGTCTGTATCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| 3UTR CCA 90 bp | CTTTGCAGGAAACAATCTGGTTCCAAAACTCCCCCAGGCCATATCTaGTTAAGTGTCTACAGTATGGCTTCCAAGCAGGTAGGCTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: LCRKQSGSKTPPGHI*LSVYSMASKQVGWA Trigger: AGCCCAGCCTACCTGCTTGGAAGCCATACTGTAGACACTTAACCAGATATGGCCTGGGGGAGTTTTGGAACCAGATTGTTTCCTGCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| 3UTR TCA 90 bp | TCAATACATCAGGCCCATGGGTACCACGTGGGGGTTGCCTTCAAGTaGAGCCCTACTATTATTTTGCTCCCAAATTATGAGCCTCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: SIHQAHGYHVGVAFK*SPTIILLPNYEPPE Trigger: CTCAGGAGGCTCATAATTTGGGAGCAAAATAATAGTAGGGCTTCACTTGAAGGCAACCCCCACGTGGTACCCATGGGCCTGATGTATTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR GCA 90 bp | GATACAGACACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTaGACCGTGAACCCTGTGCGTAGGAACAGAAGAGCCAGCTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: DTDTQRHTVKTRRSC*TVNPVRRNRRASFS Trigger: TGAGAAGCTGGCTCTTCTGTTCCTACGCACAGGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGTGTCTGTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| 3UTR GCA 90 bp | CTCATGAAGCTGCTCAGAAGCTGTGTCGTAGCTTGGAAAGCCTTCTaGACTTTCAACTTTGGGAGGGTCAAAAGGTGTCTCTTTCAACCG | + |
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Preference number: 1 (lower is better) Translates to: LMKLLRSCVVAWKAF*TFNFGRVKRCLFQP Trigger: CGGTTGAAAGAGACACCTTTTGACCCTCCCAAAGTTGAAAGTGCAGAAGGCTTTCCAAGCTACGACACAGCTTCTGAGCAGCTTCATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR CCA 90 bp | CAGAAGCTGTGTCGTAGCTTGGAAAGCCTTCTGCACTTTCAACTTTaGGAGGGTCAAAAGGTGTCTCTTTCAACCGCTTTTCCAACTCTG | + |
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Preference number: 1 (lower is better) Translates to: QKLCRSLESLLHFQL*EGQKVSLSTAFPTL Trigger: CAGAGTTGGAAAAGCGGTTGAAAGAGACACCTTTTGACCCTCCCAAAGTTGAAAGTGCAGAAGGCTTTCCAAGCTACGACACAGCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR CCA 90 bp | AATGAAAGAGCTTTTCCCACTCTATTCCTCAATACATCAGGCCCATaGGTACCACGTGGGGGTTGCCTTCAAGTGAAGCCCTACTATTAT | + |
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Preference number: 1 (lower is better) Translates to: NERAFPTLFLNTSGP*VPRGGCLQVKPYYY Trigger: ATAATAGTAGGGCTTCACTTGAAGGCAACCCCCACGTGGTACCCATGGGCCTGATGTATTGAGGAATAGAGTGGGAAAAGCTCTTTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR TCA 90 bp | GGAAAGAAACTTGAAATAACAAGCTCTCAAAGCCTGGGCATCTGTTaGGATGAGCCTGAGCTAGCACAGGAATCTCCCACTGAAAAGACA | + |
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Preference number: 1 (lower is better) Translates to: GKKLEITSSQSLGIC*DEPELAQESPTEKT Trigger: TGTCTTTTCAGTGGGAGATTCCTGTGCTAGCTCAGGCTCATCTCAACAGATGCCCAGGCTTTGAGAGCTTGTTATTTCAAGTTTCTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| 3UTR TCA 90 bp | TGCTCCCAAATTATGAGCCTCCTGAGGCCTGAGATAGTTTGTGATTaGGTCAATACCAACCTGCCAAGGAAAGCTCCTTCTTCATTCGTT | + |
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Preference number: 1 (lower is better) Translates to: CSQIMSLLRPEIVCD*VNTNLPRKAPSSFV Trigger: AACGAATGAAGAAGGAGCTTTCCTTGGCAGGTTGGTATTGACTCAATCACAAACTATCTCAGGCCTCAGGAGGCTCATAATTTGGGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR CAA 90 bp | CCGAAGGCGCTGAAGAGCTGGTACAGGTCGCTGGTTTTCCACTCTTaGGGGAAGGTCACGTGGAGAACATGGTCCCGCTTAGGCTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: PKALKSWYRSLVFHS*GKVTWRTWSRLGCK Trigger: CTTGCAGCCTAAGCGGGACCATGTTCTCCACGTGACCTTCCCCAAAGAGTGGAAAACCAGCGACCTGTACCAGCTCTTCAGCGCCTTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR-3UTR CCA 90 bp | AGACACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTGCACCGTGAACCCGCAGCAGTGGGAGGATaGCAGGGCACATCTCGGGCA | + |
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Preference number: 2 (lower is better) Translates to: RHTKTYSKNQEKLLHREPAAVGG*QGTSRA Trigger: TGCCCGAGATGTGCCCTGCCATCCTCCCACTGCTGC...GGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| 3UTR-3UTR CCA 90 bp | GGTAACAGGGGCCCTGCATGTGGGGCCGCTTTCTGTCCACCTCCTTCCAACTGTGAATTAGCAATGGCATaGATGACTCTTGAAAACCCC | + |
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Preference number: 2 (lower is better) Translates to: GNRGPACGAAFCPPPSNCELAMA*MTLENP Trigger: GGGGTTTTCAAGAGTCATCCATGCCATTGCTAATTC...ACAGTTGGAAGGAGGTGGACAGAAAGCGGCCCCACATGCAGGGCCCCTGTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR CAA 90 bp | CATCGTACCCCGCCTCATGAAGCTGCTCAGAAGCTGTGTCGTAGCTaGGAAAGCCTTCTGCACTTTCAACTTTGGGAGGGTCAAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: HRTPPHEAAQKLCRS*ESLLHFQLWEGQKV Trigger: CACCTTTTGACCCTCCCAAAGTTGAAAGTGCAGAAGGCTTTCCAAGCTACGACACAGCTTCTGAGCAGCTTCATGAGGCGGGGTACGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR-3UTR GCA 90 bp | GGACTTGATGCATGCTGTAGGCCTGCCGCTGTCACAGACAGACAGACAGACAGAAATAACACACACGCTTaGAGAAGCCCTCAACCACGA | + |
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Preference number: 2 (lower is better) Translates to: GLDACCRPAAVTDRQTDRNNTHA*RSPQPR Trigger: TCGTGGTTGAGGGCTTCTGCAAGCGTGTGTGTTATT...TCTGTCTGTCTGTCTGTCTGTGACAGCGGCAGGCCTACAGCATGCATCAAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| 3UTR-3UTR CCA 90 bp | CACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTGCACCGTGAACCCTGTCCTGTGTGCTGTTTCTaGGCAGCAGTGGGAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: HTKTYSKNQEKLLHREPCPVCCF*AAVGGW Trigger: CCATCCTCCCACTGCTGCCCAGAAACAGCACACAGG...ACAGGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| 3UTR-3UTR TCA 90 bp | GATACAAAAGCATTACATGTCCAGAAGTGTCTGCTGTGGGGTATCCTGCAGGAGAGCCTGGGCATCTGTTaGGATGAGCCTGAGCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: DTKALHVQKCLLWGILQESLGIC*DEPELA Trigger: TGCTAGCTCAGGCTCATCTCAACAGATGCCCAGGCT...CTCCTGCAGGATACCCCACAGCAGACACTTCTGGACATGTAATGCTTTTGTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| 3UTR-3UTR GCA 90 bp | CTAATGCCAGGTGCCTCCTGCTCTAGCCACACAGGCAGAAACACGCATACCATCGAGTCAATACCAACCTaGCAAGGAAAGCTCCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LMPGASCSSHTGRNTHTIESIPT*QGKLLL Trigger: AAGAAGGAGCTTTCCTTGGCAGGTTGGTATTGACTC...GATGGTATGCGTGTTTCTGCCTGTGTGGCTAGAGCAGGAGGCACCTGGCATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR-3UTR TCA 90 bp | ATCGTATGCATGACATCCAAGAGCATGTTGTGTCCCACAACCAGCTTCCCCGAAGGCATGGATGACTCTTaGAAACCCCACAGCATCATT | + |
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Preference number: 2 (lower is better) Translates to: IVCMTSKSMLCPTTSFPEGMDDS*KPHSII Trigger: AATGATGCTGTGGGGTTTTCAAGAGTCATCCATGCC...TTCGGGGAAGCTGGTTGTGGGACACAACATGCTCTTGGATGTCATGCATACGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR-3UTR TCA 90 bp | GAAACACGCATACCATCATGCTGGAACTCCTCAGAAACCATGAGCCCCAACCAAGGGTTCAATGAGCTTTaGTCTGGCAGACACACACAT | + |
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Preference number: 2 (lower is better) Translates to: ETRIPSCWNSSETMSPNQGFNEL*SGRHTH Trigger: ATGTGTGTGTCTGCCAGATCAAAGCTCATTGAACCC...TTGGTTGGGGCTCATGGTTTCTGAGGAGTTCCAGCATGATGGTATGCGTGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR-3UTR GCA 90 bp | GATACAAAAGCATTACATGTCCAGAAGTGTCTGCTGTGGGGTATCCTGCAGGAGAAAGACAAGCCTGTGTaGTGTTTCTGGGCAGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: DTKALHVQKCLLWGILQEKDKPV*CFWAAV Trigger: CACTGCTGCCCAGAAACAGCACACAGGCTTGTCTTT...CTCCTGCAGGATACCCCACAGCAGACACTTCTGGACATGTAATGCTTTTGTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAAGCTGTGTCGTAGCTTGGAAAGCCTTCTGCACTTTCAACTTTGGGAGGCCTGCTCTCTCCTTTTaGGTTCTTCTTCATCCACCT | + |
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Preference number: 2 (lower is better) Translates to: LRSCVVAWKAFCTFNFGRPALSF*VLLHPP Trigger: AGGTGGATGAAGAAGAACGCAAAAGGAGAGAGCAGG...CCTCCCAAAGTTGAAAGTGCAGAAGGCTTTCCAAGCTACGACACAGCTTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR-3UTR CCA 90 bp | AGACACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTGCACCGTGAACCCTTGCAGGAAACAATCTaGTTCCAAAACTCCCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: RHTKTYSKNQEKLLHREPLQETI*FQNSPR Trigger: CCTGGGGGAGTTTTGGAACCAGATTGTTTCCTGCAA...GGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| 3UTR CAA 90 bp | CACTCTATTCCTCAATACATCAGGCCCATGGGTACCACGTGGGGGTaGCCTTCAAGTGAAGCCCTACTATTATTTTGCTCCCAAATTATG | + |
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Preference number: 2 (lower is better) Translates to: HSIPQYIRPMGTTWG*PSSEALLLFCSQIM Trigger: CATAATTTGGGAGCAAAATAATAGTAGGGCTTCACTTGAAGGCAACCCCCACGTGGTACCCATGGGCCTGATGTATTGAGGAATAGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR-3UTR CCA 90 bp | AATACCAACCTGCCAAGGAAAGCTCCTTCTTCATTCGTTTTAACTTCTTGGACTGTCACGTGGAGAACATaGTCCCGCTTAGGCTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: NTNLPRKAPSSFVLTSWTVTWRT*SRLGCK Trigger: CTTGCAGCCTAAGCGGGACCATGTTCTCCACGTGAC...AGTCCAAGAAGTTAAAACGAATGAAGAAGGAGCTTTCCTTGGCAGGTTGGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR-3UTR TCA 90 bp | GTAATCCATCCCAGCAATGAAAGAGCTTTTCCCACTCTATTCCTCAATACATCAGTCAGATACCTCCTCTaGTTCTCTGTCCTCCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: VIHPSNERAFPTLFLNTSVRYLL*FSVLQG Trigger: GCCTTGGAGGACAGAGAATCAGAGGAGGTATCTGAC...TGATGTATTGAGGAATAGAGTGGGAAAAGCTCTTTCATTGCTGGGATGGATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR-3UTR CCA 90 bp | GAAACACGCATACCATCATGCTGGAACTCCTCAGAAACCATGAGCCCCAACCAAAATTTGTACTTGTTCTaGCTGGCTGAGAGAAACGAA | + |
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Preference number: 2 (lower is better) Translates to: ETRIPSCWNSSETMSPNQNLYLF*LAERNE Trigger: TTCGTTTCTCTCAGCCAGCCAGAACAAGTACAAATT...TTGGTTGGGGCTCATGGTTTCTGAGGAGTTCCAGCATGATGGTATGCGTGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR-3UTR GCA 90 bp | GTAATCCATCCCAGCAATGAAAGAGCTTTTCCCACTCTATTCCTCAATACATCATCATTCAGCTCCTCCTaGTCCTTTGTGTACTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: VIHPSNERAFPTLFLNTSSFSSS*SFVYFS Trigger: GGAGAAGTACACAAAGGAGCAGGAGGAGCTGAATGA...TGATGTATTGAGGAATAGAGTGGGAAAAGCTCTTTCATTGCTGGGATGGATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTTTGTGTACTTCTCCTGCTCTCTCCTTTTGCGTTCTTCTTCATCCACCTTTCTAATGTCTCAACATaGATGCCTTTAGGATACTTC | + |
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Preference number: 2 (lower is better) Translates to: LLCVLLLLSPFAFFFIHLSNVST*MPLGYF Trigger: GAAGTATCCTAAAGGCATTCATGTTGAGACATTAGA...AAGGTGGATGAAGAAGAACGCAAAAGGAGAGAGCAGGAGAAGTACACAAAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229042.2 ENSMUST00000231003.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTACTTCTCCTGCTCTCTCCTTTTGCGTTCTTCTTCATCCACCTTGCTGATATCTAATGTCTCAACATaGATGCCTTTAGGATACTTC | + |
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Preference number: 2 (lower is better) Translates to: VYFSCSLLLRSSSSTLLISNVST*MPLGYF Trigger: GAAGTATCCTAAAGGCATTCATGTTGAGACATTAGA...TATCAGCAAGGTGGATGAAGAAGAACGCAAAAGGAGAGAGCAGGAGAAGTACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229042.2 ENSMUST00000231003.2 |
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| 3UTR-3UTR GCA 90 bp | AATACCAACCTGCCAAGGAAAGCTCCTTCTTCATTCGTTTTAACTTCTTGGACTACCTGCTTGCCTTTCTaGTTCTTTCCCACATACTCA | + |
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Preference number: 2 (lower is better) Translates to: NTNLPRKAPSSFVLTSWTTCLPF*FFPTYS Trigger: TGAGTATGTGGGAAAGAAGCAGAAAGGCAAGCAGGT...AGTCCAAGAAGTTAAAACGAATGAAGAAGGAGCTTTCCTTGGCAGGTTGGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR CCA 72 bp | CTGCCTAGAACACCCCGGAGGTTGGCTCTCCTGGCGTaGTTCACAGCTGACTTACTCCCTGGGTGGACTTGC | + |
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Preference number: 3 (lower is better) Translates to: LPRTPRRLALLA*FTADLLPGWTC Trigger: GCAAGTCCACCCAGGGAGTAAGTCAGCTGTGAACCACGCCAGGAGAGCCAACCTCCGGGGTGTTCTAGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| 3UTR CCA 72 bp | AAGCCTGTGTGCTGTTTCTGGGCAGCAGTGGGAGGATaGCAGGGCACATCTCGGGCAGGAGAAGCTCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: KPVCCFWAAVGG*QGTSRAGEALQ Trigger: CTGCAGAGCTTCTCCTGCCCGAGATGTGCCCTGCCATCCTCCCACTGCTGCCCAGAAACAGCACACAGGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| 3UTR GCA 72 bp | GAGGATGGCAGGGCACATCTCGGGCAGGAGAAGCTCTaGAGAAATCTGCCTAGAACACCCCGGAGGTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: EDGRAHLGQEKL*RNLPRTPRRLA Trigger: AGCCAACCTCCGGGGTGTTCTAGGCAGATTTCTGCAGAGCTTCTCCTGCCCGAGATGTGCCCTGCCATCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| 3UTR TCA 72 bp | GACTCAGCGTCCTCTTTCCAAGCATGCCAGCGGCTGTaGAGCTGTTGCTGTGGTAACAGGGGCCCTGCATGT | + |
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Preference number: 3 (lower is better) Translates to: DSASSFQACQRL*SCCCGNRGPAC Trigger: ACATGCAGGGCCCCTGTTACCACAGCAACAGCTTCACAGCCGCTGGCATGCTTGGAAAGAGGACGCTGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR CCA 72 bp | CTCCTGGCGTGGTTCACAGCTGACTTACTCCCTGGGTaGACTTGCCAACATTCACCAGGGCAGGCAGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: LLAWFTADLLPG*TCQHSPGQAGF Trigger: AAAACCTGCCTGCCCTGGTGAATGTTGGCAAGTCCACCCAGGGAGTAAGTCAGCTGTGAACCACGCCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| 3UTR-3UTR CAA 90 bp | CAGGTGCCTCCTGCTCTAGCCACACAGGCAGAAACACGCATACCATCATGCTGGTCTGTCCACTTCCTCTaGACCTGCTTGCCTTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: QVPPALATQAETRIPSCWSVHFL*TCLPFC Trigger: GCAGAAAGGCAAGCAGGTCAAGAGGAAGTGGACAGA...CCAGCATGATGGTATGCGTGTTTCTGCCTGTGTGGCTAGAGCAGGAGGCACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR GCA 72 bp | GCGTGGTTCACAGCTGACTTACTCCCTGGGTGGACTTaGCAACATTCACCAGGGCAGGCAGGTTTTCAAGGA | + |
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Preference number: 3 (lower is better) Translates to: AWFTADLLPGWT*QHSPGQAGFQG Trigger: TCCTTGAAAACCTGCCTGCCCTGGTGAATGTTGGCAAGTCCACCCAGGGAGTAAGTCAGCTGTGAACCACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| 3UTR GCA 72 bp | TCCTCCACTTCCTATCTGCTAATGCCAGGTGCCTCCTaGTCTAGCCACACAGGCAGAAACACGCATACCATC | + |
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Preference number: 3 (lower is better) Translates to: SSTSYLLMPGAS*SSHTGRNTHTI Trigger: GATGGTATGCGTGTTTCTGCCTGTGTGGCTAGAGCAGGAGGCACCTGGCATTAGCAGATAGGAAGTGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| 3UTR CCA 72 bp | GCTTTTCCCACTCTATTCCTCAATACATCAGGCCCATaGGTACCACGTGGGGGTTGCCTTCAAGTGAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: AFPTLFLNTSGP*VPRGGCLQVKP Trigger: GGGCTTCACTTGAAGGCAACCCCCACGTGGTACCCATGGGCCTGATGTATTGAGGAATAGAGTGGGAAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| 3UTR GCA 72 bp | GCTCTAGCCACACAGGCAGAAACACGCATACCATCATaGTGGAACTCCTCAGAAACCATGAGCCCCAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: ALATQAETRIPS*WNSSETMSPNQ Trigger: TTGGTTGGGGCTCATGGTTTCTGAGGAGTTCCAGCATGATGGTATGCGTGTTTCTGCCTGTGTGGCTAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| 3UTR CCA 72 bp | CGCCTCATGAAGCTGCTCAGAAGCTGTGTCGTAGCTTaGAAAGCCTTCTGCACTTTCAACTTTGGGAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RLMKLLRSCVVA*KAFCTFNFGRV Trigger: GACCCTCCCAAAGTTGAAAGTGCAGAAGGCTTTCCAAGCTACGACACAGCTTCTGAGCAGCTTCATGAGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| 3UTR CCA 72 bp | CTAGCCACACAGGCAGAAACACGCATACCATCATGCTaGAACTCCTCAGAAACCATGAGCCCCAACCAATCC | + |
|
Preference number: 3 (lower is better) Translates to: LATQAETRIPSC*NSSETMSPNQS Trigger: GGATTGGTTGGGGCTCATGGTTTCTGAGGAGTTCCAGCATGATGGTATGCGTGTTTCTGCCTGTGTGGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCCACTCTATTCCTCAATACATCAGGCCCATGGGTACCACGTGGGGGTTGCACATCCAAGAGCATGTaGTGTCCCACAACCAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FPTLFLNTSGPWVPRGGCTSKSM*CPTTSF Trigger: GAAGCTGGTTGTGGGACACAACATGCTCTTGGATGT...GCAACCCCCACGTGGTACCCATGGGCCTGATGTATTGAGGAATAGAGTGGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| 3UTR TCA 72 bp | CAGGCAGGGGGCAGTAGAACTGATGAATCGTATGCATaGCATCCAAGAGCATGTTGTGTCCCACAACCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QAGGSRTDESYA*HPRACCVPQPA Trigger: AGCTGGTTGTGGGACACAACATGCTCTTGGATGTCATGCATACGATTCATCAGTTCTACTGCCCCCTGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| 3UTR CCA 72 bp | GATACAAAAGCATTACATGTCCAGAAGTGTCTGCTGTaGGGTATCCTGCAGGAGCAAGTGAGGCTCTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: DTKALHVQKCLL*GILQEQVRLCH Trigger: GTGGCAGAGCCTCACTTGCTCCTGCAGGATACCCCACAGCAGACACTTCTGGACATGTAATGCTTTTGTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| 3UTR TCA 72 bp | CAGGCCCATGGGTACCACGTGGGGGTTGCCTTCAAGTaGAGCCCTACTATTATTTTGCTCCCAAATTATGAG | + |
|
Preference number: 3 (lower is better) Translates to: QAHGYHVGVAFK*SPTIILLPNYE Trigger: CTCATAATTTGGGAGCAAAATAATAGTAGGGCTTCACTTGAAGGCAACCCCCACGTGGTACCCATGGGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| 3UTR GCA 72 bp | ACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTaGACCGTGAACCCTGTGCGTAGGAACAGAAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TQRHTVKTRRSC*TVNPVRRNRRA Trigger: GGCTCTTCTGTTCCTACGCACAGGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| 3UTR GCA 72 bp | CTGCTCAGAAGCTGTGTCGTAGCTTGGAAAGCCTTCTaGACTTTCAACTTTGGGAGGGTCAAAAGGTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLRSCVVAWKAF*TFNFGRVKRCL Trigger: GAGACACCTTTTGACCCTCCCAAAGTTGAAAGTGCAGAAGGCTTTCCAAGCTACGACACAGCTTCTGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| 3UTR CCA 72 bp | AGGTCTCTGAGGGTTAAACCCACCCTGATTCTGATCTaGATTGGCTCCTCCACTTCCTATCTGCTAATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RSLRVKPTLILI*IGSSTSYLLMP Trigger: TGGCATTAGCAGATAGGAAGTGGAGGAGCCAATCCAGATCAGAATCAGGGTGGGTTTAACCCTCAGAGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| 3UTR TCA 72 bp | CTTGAAATAACAAGCTCTCAAAGCCTGGGCATCTGTTaGGATGAGCCTGAGCTAGCACAGGAATCTCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: LEITSSQSLGIC*DEPELAQESPT Trigger: AGTGGGAGATTCCTGTGCTAGCTCAGGCTCATCTCAACAGATGCCCAGGCTTTGAGAGCTTGTTATTTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| 3UTR GCA 72 bp | GACACACAAAGACATACAGTAAAAACCAGGAGAAGCTaGTGCACCGTGAACCCTGTGCGTAGGAACAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: DTQRHTVKTRRS*CTVNPVRRNRR Trigger: TCTTCTGTTCCTACGCACAGGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| 3UTR-3UTR CAA 90 bp | CTAATGCCAGGTGCCTCCTGCTCTAGCCACACAGGCAGAAACACGCATACCATCATTCGTTTTAACTTCTaGGACTTTTTCCTTCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LMPGASCSSHTGRNTHTIIRFNF*DFFLPS Trigger: AGAGGGAAGGAAAAAGTCCAAGAAGTTAAAACGAAT...GATGGTATGCGTGTTTCTGCCTGTGTGGCTAGAGCAGGAGGCACCTGGCATTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| 3UTR GCA 72 bp | CAACTTAGTATCCAAGAGTCTGGGGAAGACACATATTaGCATCTCCTTAAACTCATTCAGGTCCGCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QLSIQESGEDTY*HLLKLIQVRRQ Trigger: CTGCCTGCGGACCTGAATGAGTTTAAGGAGATGGCAATATGTGTCTTCCCCAGACTCTTGGATACTAAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| 3UTR TCA 72 bp | ATTATGAGCCTCCTGAGGCCTGAGATAGTTTGTGATTaGGTCAATACCAACCTGCCAAGGAAAGCTCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: IMSLLRPEIVCD*VNTNLPRKAPS Trigger: AGAAGGAGCTTTCCTTGGCAGGTTGGTATTGACTCAATCACAAACTATCTCAGGCCTCAGGAGGCTCATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| 3UTR CCA 72 bp | TGTCGTAGCTTGGAAAGCCTTCTGCACTTTCAACTTTaGGAGGGTCAAAAGGTGTCTCTTTCAACCGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CRSLESLLHFQL*EGQKVSLSTAF Trigger: AAAAGCGGTTGAAAGAGACACCTTTTGACCCTCCCAAAGTTGAAAGTGCAGAAGGCTTTCCAAGCTACGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR TCA 90 bp | GTGCTGTTTCTGGGCAGCAGTGGGAGGATGGCAGGGCACATCTCGGGCAGGAGACTGAGGGTCCATTGCTaGTTCCTGAAAACTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLFLGSSGRMAGHISGRRLRVHC*FLKTPH Trigger: ATGGGGAGTTTTCAGGAATCAGCAATGGACCCTCAG...TCTCCTGCCCGAGATGTGCCCTGCCATCCTCCCACTGCTGCCCAGAAACAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR TCA 90 bp | GGACTTGATGCATGCTGTAGGCCTGCCGCTGTCACAGACAGACAGACAGACAGATCGTACCCCGCCTCATaGAGCTGCTCAGAAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLDACCRPAAVTDRQTDRSYPAS*SCSEAV Trigger: CACAGCTTCTGAGCAGCTTCATGAGGCGGGGTACGA...TCTGTCTGTCTGTCTGTCTGTGACAGCGGCAGGCCTACAGCATGCATCAAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR GCA 90 bp | ACAGGGGCCCTGCATGTGGGGCCGCTTTCTGTCCACCTCCTTCCAACTGTCTTCTCGCCAGGAAGTCAATaGTGGAGCTCTGGCAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: TGALHVGPLSVHLLPTVFSPGSQ*WSSGKQ Trigger: TTGTTTGCCAGAGCTCCAGCATTGACTTCCTGGCGA...GAAGACAGTTGGAAGGAGGTGGACAGAAAGCGGCCCCACATGCAGGGCCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR CCA 90 bp | GTGCTGTTTCTGGGCAGCAGTGGGAGGATGGCAGGGCACATCTCGGGCAGGAGACCAGGAAGTCAATGCTaGAGCTCTGGCAAACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: VLFLGSSGRMAGHISGRRPGSQC*SSGKQT Trigger: AGTTTGTTTGCCAGAGCTCCAGCATTGACTTCCTGG...TCTCCTGCCCGAGATGTGCCCTGCCATCCTCCCACTGCTGCCCAGAAACAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR TCA 90 bp | TTGGGGAAGGTCACGTGGAGAACATGGTCCCGCTTAGGCTGCAAGTCTGGCCCTCTGGTGAGGACCTACTaGAAGGCTTGGGGAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LGKVTWRTWSRLGCKSGPLVRTY*KAWGKH Trigger: ATGTTTTCCCCAAGCCTTTCAGTAGGTCCTCACCAG...AGGGCCAGACTTGCAGCCTAAGCGGGACCATGTTCTCCACGTGACCTTCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGACTTGCCAACATTCACCAGGGCAGGCAGGTTTTCAAGGAGCAGGAAGTATGGTCCCGCTTAGGCTaGAAGTCTGGCCCTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGLANIHQGRQVFKEQEVWSRLG*KSGPSK Trigger: CTTGGAAGGGCCAGACTTGCAGCCTAAGCGGGACCA...TACTTCCTGCTCCTTGAAAACCTGCCTGCCCTGGTGAATGTTGGCAAGTCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CCA 90 bp | GGACTTGATGCATGCTGTAGGCCTGCCGCTGTCACAGACAGACAGACAGACAGAGTCACGTGGAGAACATaGTCCCGCTTAGGCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLDACCRPAAVTDRQTDRVTWRT*SRLGCK Trigger: CTTGCAGCCTAAGCGGGACCATGTTCTCCACGTGAC...TCTGTCTGTCTGTCTGTCTGTGACAGCGGCAGGCCTACAGCATGCATCAAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CCA 90 bp | GTGTGCTGTTTCTGGGCAGCAGTGGGAGGATGGCAGGGCACATCTCGGGCAGGATCAATGCTGGAGCTCTaGCAAACAAACTTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: VCCFWAAVGGWQGTSRAGSMLEL*QTNLTS Trigger: AGATGTCAAGTTTGTTTGCCAGAGCTCCAGCATTGA...TCCTGCCCGAGATGTGCCCTGCCATCCTCCCACTGCTGCCCAGAAACAGCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CCA 90 bp | GTGTGCTGTTTCTGGGCAGCAGTGGGAGGATGGCAGGGCACATCTCGGGCAGGAGAATTAGCAATGGCATaGATGACTCTTGAAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: VCCFWAAVGGWQGTSRAGELAMA*MTLENP Trigger: GGGGTTTTCAAGAGTCATCCATGCCATTGCTAATTC...TCCTGCCCGAGATGTGCCCTGCCATCCTCCCACTGCTGCCCAGAAACAGCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CCA 90 bp | TTTTCCTTCCCTCTGGGAGGGGGTCTGTACAGGAATCTGTCTGTTCAAGCTCCGGGCAGGTGCATCTGTTaGTCCAGTGCATGGGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSFPLGGGLYRNLSVQAPGRCIC*SSAWVK Trigger: CTTGACCCATGCACTGGACCAACAGATGCACCTGCC...CGGAGCTTGAACAGACAGATTCCTGTACAGACCCCCTCCCAGAGGGAAGGAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| 3UTR CAA 72 bp | CTGAAGAGCTGGTACAGGTCGCTGGTTTTCCACTCTTaGGGGAAGGTCACGTGGAGAACATGGTCCCGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LKSWYRSLVFHS*GKVTWRTWSRL Trigger: TAAGCGGGACCATGTTCTCCACGTGACCTTCCCCAAAGAGTGGAAAACCAGCGACCTGTACCAGCTCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCCAAGGCAGCTTCCCTTGGGTCGGGACTCAGCGTCCTCTTTCCAAGCATGGCACAAAGGCCAAACTaGAACAGCAAAAAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSKAASLGSGLSVLFPSMAQRPN*NSKKSM Trigger: CATGGACTTTTTGCTGTTTCAGTTTGGCCTTTGTGC...CATGCTTGGAAAGAGGACGCTGAGTCCCGACCCAAGGGAAGCTGCCTTGGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR CCA 90 bp | CGTGGTTCACAGCTGACTTACTCCCTGGGTGGACTTGCCAACATTCACCAGGGCAGTCAGCCTCCTCTATaGCCTGGTACACTTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGSQLTYSLGGLANIHQGSQPPL*PGTLCE Trigger: TTCACAAAGTGTACCAGGCCATAGAGGAGGCTGACT...GCCCTGGTGAATGTTGGCAAGTCCACCCAGGGAGTAAGTCAGCTGTGAACCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CCA 90 bp | CGTGGTTCACAGCTGACTTACTCCCTGGGTGGACTTGCCAACATTCACCAGGGCAGCTGTGTCGTAGCTTaGAAAGCCTTCTGCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGSQLTYSLGGLANIHQGSCVVA*KAFCTF Trigger: GAAAGTGCAGAAGGCTTTCCAAGCTACGACACAGCT...GCCCTGGTGAATGTTGGCAAGTCCACCCAGGGAGTAAGTCAGCTGTGAACCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CCA 90 bp | GTGCTGTTTCTGGGCAGCAGTGGGAGGATGGCAGGGCACATCTCGGGCAGGAGAAATTTGTACTTGTTCTaGCTGGCTGAGAGAAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLFLGSSGRMAGHISGRRNLYLF*LAERNE Trigger: TTCGTTTCTCTCAGCCAGCCAGAACAAGTACAAATT...TCTCCTGCCCGAGATGTGCCCTGCCATCCTCCCACTGCTGCCCAGAAACAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| 3UTR CAA 72 bp | CCGCCTCATGAAGCTGCTCAGAAGCTGTGTCGTAGCTaGGAAAGCCTTCTGCACTTTCAACTTTGGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPHEAAQKLCRS*ESLLHFQLWEG Trigger: ACCCTCCCAAAGTTGAAAGTGCAGAAGGCTTTCCAAGCTACGACACAGCTTCTGAGCAGCTTCATGAGGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCCTTCCCTCTGGGAGGGGGTCTGTACAGGAATCTGTCTGTTCAAGCTCCGTCCATTGCTGATTCCTaGAAACTCCCCATCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSFPLGGGLYRNLSVQAPSIADS*KLPIDG Trigger: GCCATCGATGGGGAGTTTTCAGGAATCAGCAATGGA...CGGAGCTTGAACAGACAGATTCCTGTACAGACCCCCTCCCAGAGGGAAGGAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR TCA 90 bp | GGACTTGATGCATGCTGTAGGCCTGCCGCTGTCACAGACAGACAGACAGACAGAGGCATGGATGACTCTTaGAAACCCCACAGCATCATT | + |
|
Preference number: 4 (lower is better) Translates to: GLDACCRPAAVTDRQTDRGMDDS*KPHSII Trigger: AATGATGCTGTGGGGTTTTCAAGAGTCATCCATGCC...TCTGTCTGTCTGTCTGTCTGTGACAGCGGCAGGCCTACAGCATGCATCAAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR TCA 90 bp | ATACAAAAGCATTACATGTCCAGAAGTGTCTGCTGTGGGGTATCCTGCAGGAGCTGTTACCGAAGGCGCTaGAGAGCTGGTACAGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: IQKHYMSRSVCCGVSCRSCYRRR*RAGTGR Trigger: GCGACCTGTACCAGCTCTTCAGCGCCTTCGGTAACA...GCTCCTGCAGGATACCCCACAGCAGACACTTCTGGACATGTAATGCTTTTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR TCA 90 bp | CACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTGCACCGTGAACCCTGTGCATGCCAGCGGCTGTaGAGCTGTTGCTGTGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HTKTYSKNQEKLLHREPCACQRL*SCCCGN Trigger: GTTACCACAGCAACAGCTTCACAGCCGCTGGCATGC...ACAGGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR GCA 90 bp | GGACTTGATGCATGCTGTAGGCCTGCCGCTGTCACAGACAGACAGACAGACAGACCTGCTCTCTCCTTTTaGGTTCTTCTTCATCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GLDACCRPAAVTDRQTDRPALSF*VLLHPP Trigger: AGGTGGATGAAGAAGAACGCAAAAGGAGAGAGCAGG...TCTGTCTGTCTGTCTGTCTGTGACAGCGGCAGGCCTACAGCATGCATCAAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CCA 90 bp | GTGTGCTGTTTCTGGGCAGCAGTGGGAGGATGGCAGGGCACATCTCGGGCAGGATGCTTGGAATCTGTGTaGTCATACTTAAAAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VCCFWAAVGGWQGTSRAGCLESV*SYLKAQ Trigger: TTGTGCTTTTAAGTATGACCACACAGATTCCAAGCA...TCCTGCCCGAGATGTGCCCTGCCATCCTCCCACTGCTGCCCAGAAACAGCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CCA 90 bp | GGACTTGATGCATGCTGTAGGCCTGCCGCTGTCACAGACAGACAGACAGACAGATCTGATCCTCAGGGATaGTCACAGGACATTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLDACCRPAAVTDRQTDRSDPQG*SQDILP Trigger: TGGCAAAATGTCCTGTGACCATCCCTGAGGATCAGA...TCTGTCTGTCTGTCTGTCTGTGACAGCGGCAGGCCTACAGCATGCATCAAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CCA 90 bp | GGACTTGATGCATGCTGTAGGCCTGCCGCTGTCACAGACAGACAGACAGACAGATGTACTTGTTCTGGCTaGCTGAGAGAAACGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLDACCRPAAVTDRQTDRCTCSG*LRETKA Trigger: AGCCTTCGTTTCTCTCAGCCAGCCAGAACAAGTACA...TCTGTCTGTCTGTCTGTCTGTGACAGCGGCAGGCCTACAGCATGCATCAAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR GCA 90 bp | AGACACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTGCACCGTGAACCCTTTTGCCAGAGCTCCTaGCCCATTGGCTTGAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: RHTKTYSKNQEKLLHREPFCQSS*PIGLRP Trigger: CGGTCTCAAGCCAATGGGGCAGGAGCTCTGGCAAAA...GGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR GCA 90 bp | GGTGGACTTGCCAACATTCACCAGGGCAGGCAGGTTTTCAAGGAGCAGGAAGTAGCTTGGAAAGCCTTCTaGACTTTCAACTTTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLANIHQGRQVFKEQEVAWKAF*TFNFGR Trigger: CCTCCCAAAGTTGAAAGTGCAGAAGGCTTTCCAAGC...TACTTCCTGCTCCTTGAAAACCTGCCTGCCCTGGTGAATGTTGGCAAGTCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CCA 90 bp | TTTTCCTTCCCTCTGGGAGGGGGTCTGTACAGGAATCTGTCTGTTCAAGCTCCGCCAGGAAGTCAATGCTaGAGCTCTGGCAAACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: FSFPLGGGLYRNLSVQAPPGSQC*SSGKQT Trigger: AGTTTGTTTGCCAGAGCTCCAGCATTGACTTCCTGG...CGGAGCTTGAACAGACAGATTCCTGTACAGACCCCCTCCCAGAGGGAAGGAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR TCA 90 bp | TGCGTAGGAACAGAAGAGCCAGCTTCTCACACACATGTCACCACACCCGGGACATCAATAAACTTCTTCTaGTCCTCAGGGATGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: CVGTEEPASHTHVTTPGTSINFF*SSGMVT Trigger: TGTGACCATCCCTGAGGATCAGAAGAAGTTTATTGA...TGTCCCGGGTGTGGTGACATGTGTGTGAGAAGCTGGCTCTTCTGTTCCTACGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR TCA 90 bp | GGTGGACTTGCCAACATTCACCAGGGCAGGCAGGTTTTCAAGGAGCAGGAAGTAGAGAGAAACGAAGGCTaGTGTATCATCAATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGLANIHQGRQVFKEQEVERNEG*CIINPG Trigger: TCCTGGATTGATGATACATCAGCCTTCGTTTCTCTC...TACTTCCTGCTCCTTGAAAACCTGCCTGCCCTGGTGAATGTTGGCAAGTCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR TCA 90 bp | AGACACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTGCACCGTGAACCCGTCAGATACCTCCTCTaGTTCTCTGTCCTCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RHTKTYSKNQEKLLHREPVRYLL*FSVLQG Trigger: GCCTTGGAGGACAGAGAATCAGAGGAGGTATCTGAC...GGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR GCA 90 bp | GGACTTGATGCATGCTGTAGGCCTGCCGCTGTCACAGACAGACAGACAGACAGACGTTTTTCATCGAATTaGTCTCTCAGCTGCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLDACCRPAAVTDRQTDRRFSSN*SLSCLS Trigger: AGAAAGGCAGCTGAGAGAGCAATTCGATGAAAAACG...TCTGTCTGTCTGTCTGTCTGTGACAGCGGCAGGCCTACAGCATGCATCAAGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR GCA 90 bp | ATACAAAAGCATTACATGTCCAGAAGTGTCTGCTGTGGGGTATCCTGCAGGAGCGGTCACAGGACATTTTaGCAGAGCTCCTGCCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: IQKHYMSRSVCCGVSCRSGHRTF*QSSCPI Trigger: AATGGGGCAGGAGCTCTGGCAAAATGTCCTGTGACC...GCTCCTGCAGGATACCCCACAGCAGACACTTCTGGACATGTAATGCTTTTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CCA 90 bp | GATACAAAAGCATTACATGTCCAGAAGTGTCTGCTGTGGGGTATCCTGCAGGAGAAGGCGCTGAAGAGCTaGTACAGGTCGCTGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DTKALHVQKCLLWGILQEKALKS*YRSLVF Trigger: GAAAACCAGCGACCTGTACCAGCTCTTCAGCGCCTT...CTCCTGCAGGATACCCCACAGCAGACACTTCTGGACATGTAATGCTTTTGTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| 3UTR CAA 72 bp | TCCACCTCCTTCCAACTGTCTTCTGTCCACTTCCTCTaGACCTGCTTGCCTTTCTGCTTCTTTCCCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: STSFQLSSVHFL*TCLPFCFFPTY Trigger: GTATGTGGGAAAGAAGCAGAAAGGCAAGCAGGTCAAGAGGAAGTGGACAGAAGACAGTTGGAAGGAGGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR TCA 90 bp | CCTGCTCCTTTGTGTACTTCTCCTGCTCTCTCCTTTTGCGTTCTTCTTCATCCATCCATTGCTGATTCCTaGAAACTCCCCATCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PAPLCTSPALSFCVLLHPSIADS*KLPIDG Trigger: GCCATCGATGGGGAGTTTTCAGGAATCAGCAATGGA...TGGATGAAGAAGAACGCAAAAGGAGAGAGCAGGAGAAGTACACAAAGGAGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000229042.2 ENSMUST00000231003.2 |
||
| CDS-3UTR TCA 90 bp | ATACAAAAGCATTACATGTCCAGAAGTGTCTGCTGTGGGGTATCCTGCAGGAGCCTGGTGAGGACCTACTaGAAGGCTTGGGGAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: IQKHYMSRSVCCGVSCRSLVRTY*KAWGKH Trigger: ATGTTTTCCCCAAGCCTTTCAGTAGGTCCTCACCAG...GCTCCTGCAGGATACCCCACAGCAGACACTTCTGGACATGTAATGCTTTTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR GCA 90 bp | CACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTGCACCGTGAACCCTGTTCGCCAGGAAGTCAATaGTGGAGCTCTGGCAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: HTKTYSKNQEKLLHREPCSPGSQ*WSSGKQ Trigger: TTGTTTGCCAGAGCTCCAGCATTGACTTCCTGGCGA...ACAGGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR GCA 90 bp | GGACTTGATGCATGCTGTAGGCCTGCCGCTGTCACAGACAGACAGACAGACAGAGGGGAAGACACATATTaGCATCTCCTTAAACTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GLDACCRPAAVTDRQTDRGEDTY*HLLKLI Trigger: AATGAGTTTAAGGAGATGGCAATATGTGTCTTCCCC...TCTGTCTGTCTGTCTGTCTGTGACAGCGGCAGGCCTACAGCATGCATCAAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR GCA 90 bp | GGTGGACTTGCCAACATTCACCAGGGCAGGCAGGTTTTCAAGGAGCAGGAAGTACCGCTTTTCCAACTCTaGAAGGGATGTGTTGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GGLANIHQGRQVFKEQEVPLFQL*KGCVVN Trigger: ATTAACAACACATCCCTTGCAGAGTTGGAAAAGCGG...TACTTCCTGCTCCTTGAAAACCTGCCTGCCCTGGTGAATGTTGGCAAGTCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CCA 90 bp | AGACACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTGCACCGTGAACCCAAAACTCCCCATCGATaGCGAAGAAGTCAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RHTKTYSKNQEKLLHREPKTPHR*RRSQPP Trigger: AGGAGGCTGACTTCTTCGCCATCGATGGGGAGTTTT...GGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CCA 90 bp | TTTTCCTTCCCTCTGGGAGGGGGTCTGTACAGGAATCTGTCTGTTCAAGCTCCGTCAATGCTGGAGCTCTaGCAAACAAACTTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: FSFPLGGGLYRNLSVQAPSMLEL*QTNLTS Trigger: AGATGTCAAGTTTGTTTGCCAGAGCTCCAGCATTGA...CGGAGCTTGAACAGACAGATTCCTGTACAGACCCCCTCCCAGAGGGAAGGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTTTGTGTACTTCTCCTGCTCTCTCCTTTTGCGTTCTTCTTCATCCACCTTCTGAGGGTCCATTGCTaGTTCCTGAAAACTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLCVLLLLSPFAFFFIHLLRVHC*FLKTPH Trigger: ATGGGGAGTTTTCAGGAATCAGCAATGGACCCTCAG...AAGGTGGATGAAGAAGAACGCAAAAGGAGAGAGCAGGAGAAGTACACAAAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000229042.2 ENSMUST00000231003.2 |
||
| CDS-3UTR TCA 90 bp | ATACAAAAGCATTACATGTCCAGAAGTGTCTGCTGTGGGGTATCCTGCAGGAGCTCTGGCAAACAAACTTaGCATCTGGTGAGGACCTAC | + |
|
Preference number: 4 (lower is better) Translates to: IQKHYMSRSVCCGVSCRSSGKQT*HLVRTY Trigger: GTAGGTCCTCACCAGATGTCAAGTTTGTTTGCCAGA...GCTCCTGCAGGATACCCCACAGCAGACACTTCTGGACATGTAATGCTTTTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR TCA 90 bp | TGCGTAGGAACAGAAGAGCCAGCTTCTCACACACATGTCACCACACCCGGGACATCTAATGTCTCAACATaGATGCCTTTAGGATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CVGTEEPASHTHVTTPGTSNVST*MPLGYF Trigger: GAAGTATCCTAAAGGCATTCATGTTGAGACATTAGA...TGTCCCGGGTGTGGTGACATGTGTGTGAGAAGCTGGCTCTTCTGTTCCTACGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR TCA 90 bp | GATACAAAAGCATTACATGTCCAGAAGTGTCTGCTGTGGGGTATCCTGCAGGAGTCAATCCAGGATATCTaGATGTTACCGAAGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTKALHVQKCLLWGILQESIQDI*MLPKAL Trigger: CAGCGCCTTCGGTAACATTCAGATATCCTGGATTGA...CTCCTGCAGGATACCCCACAGCAGACACTTCTGGACATGTAATGCTTTTGTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR GCA 90 bp | GGCAGAAACACGCATACCATCATGCTGGAACTCCTCAGAAACCATGAGCCCCAACGTTTTTCATCGAATTaGTCTCTCAGCTGCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRNTHTIMLELLRNHEPQRFSSN*SLSCLS Trigger: AGAAAGGCAGCTGAGAGAGCAATTCGATGAAAAACG...TTGGGGCTCATGGTTTCTGAGGAGTTCCAGCATGATGGTATGCGTGTTTCTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR GCA 90 bp | ATACAAAAGCATTACATGTCCAGAAGTGTCTGCTGTGGGGTATCCTGCAGGAGCTCATTCAGCTCCTCCTaGTCCTTTGTGTACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IQKHYMSRSVCCGVSCRSSFSSS*SFVYFS Trigger: GGAGAAGTACACAAAGGAGCAGGAGGAGCTGAATGA...GCTCCTGCAGGATACCCCACAGCAGACACTTCTGGACATGTAATGCTTTTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CCA 90 bp | CTCCTTTGTGTACTTCTCCTGCTCTCTCCTTTTGCGTTCTTCTTCATCCACCTTAAAACTCCCCATCGATaGCGAAGAAGTCAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLCVLLLLSPFAFFFIHLKTPHR*RRSQPP Trigger: AGGAGGCTGACTTCTTCGCCATCGATGGGGAGTTTT...AAGGTGGATGAAGAAGAACGCAAAAGGAGAGAGCAGGAGAAGTACACAAAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000229042.2 ENSMUST00000231003.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTGTGTCCCACAACCAGCTTCCCCGAATTAGCAATGGCATGGATGACTCTTTCTGATCCTCAGGGATaGTCACAGGACATTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MLCPTTSFPELAMAWMTLSDPQG*SQDILP Trigger: TGGCAAAATGTCCTGTGACCATCCCTGAGGATCAGA...AAGAGTCATCCATGCCATTGCTAATTCGGGGAAGCTGGTTGTGGGACACAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR CCA 90 bp | ATACAAAAGCATTACATGTCCAGAAGTGTCTGCTGTGGGGTATCCTGCAGGAGCTGGTTTTCCACTCTTTaGGGAAGGTCACGTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IQKHYMSRSVCCGVSCRSWFSTL*GRSRGE Trigger: TTCTCCACGTGACCTTCCCCAAAGAGTGGAAAACCA...GCTCCTGCAGGATACCCCACAGCAGACACTTCTGGACATGTAATGCTTTTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR TCA 90 bp | CACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTGCACCGTGAACCCTGTGCACAAAGGCCAAACTaGAACAGCAAAAAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HTKTYSKNQEKLLHREPCAQRPN*NSKKSM Trigger: CATGGACTTTTTGCTGTTTCAGTTTGGCCTTTGTGC...ACAGGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR TCA 90 bp | GAAACACGCATACCATCATGCTGGAACTCCTCAGAAACCATGAGCCCCAACCAATCAATAAACTTCTTCTaGTCCTCAGGGATGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ETRIPSCWNSSETMSPNQSINFF*SSGMVT Trigger: TGTGACCATCCCTGAGGATCAGAAGAAGTTTATTGA...TTGGTTGGGGCTCATGGTTTCTGAGGAGTTCCAGCATGATGGTATGCGTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR GCA 90 bp | ATACAAAAGCATTACATGTCCAGAAGTGTCTGCTGTGGGGTATCCTGCAGGAGCACCTGCTTGCCTTTCTaGTTCTTTCCCACATACTCA | + |
|
Preference number: 4 (lower is better) Translates to: IQKHYMSRSVCCGVSCRSTCLPF*FFPTYS Trigger: TGAGTATGTGGGAAAGAAGCAGAAAGGCAAGCAGGT...GCTCCTGCAGGATACCCCACAGCAGACACTTCTGGACATGTAATGCTTTTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CCA 90 bp | ATACAAAAGCATTACATGTCCAGAAGTGTCTGCTGTGGGGTATCCTGCAGGAGCCTGCACTTTCAACTTTaGGAGGGTCAAAAGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IQKHYMSRSVCCGVSCRSLHFQL*EGQKVS Trigger: AGACACCTTTTGACCCTCCCAAAGTTGAAAGTGCAG...GCTCCTGCAGGATACCCCACAGCAGACACTTCTGGACATGTAATGCTTTTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR TCA 90 bp | AGACACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTGCACCGTGAACCCTGCCTTTCTTCTTCCTaGTTCAGATATGGAATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHTKTYSKNQEKLLHREPCLSSS*FRYGIP Trigger: TGGGATTCCATATCTGAATCAGGAAGAAGAAAGGCA...GGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR GCA 90 bp | GTAATCCATCCCAGCAATGAAAGAGCTTTTCCCACTCTATTCCTCAATACATCACATCTGTTGGTCCAGTaGATGGGTCAAGTTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VIHPSNERAFPTLFLNTSHLLVQ*MGQVPG Trigger: GCCTGGAACTTGACCCATGCACTGGACCAACAGATG...TGATGTATTGAGGAATAGAGTGGGAAAAGCTCTTTCATTGCTGGGATGGATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTCCTGCTCTCTCCTTTTGCGTTCTTCTTCATCCACCTTGCTGATAACTATAGTCAGCCTCCTCTATaGCCTGGTACACTTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLLSPFAFFFIHLADNYSQPPL*PGTLCE Trigger: TTCACAAAGTGTACCAGGCCATAGAGGAGGCTGACT...ATAGTTATCAGCAAGGTGGATGAAGAAGAACGCAAAAGGAGAGAGCAGGAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229042.2 ENSMUST00000231003.2 |
||
| CDS-3UTR GCA 90 bp | TCATCCACCTTGCTGATAACTATATGTCTTTCCTTCTTGTCAGTCTCTAATGTCGGTCACAGGACATTTTaGCAGAGCTCCTGCCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SSTLLITICLSFLSVSNVGHRTF*QSSCPI Trigger: AATGGGGCAGGAGCTCTGGCAAAATGTCCTGTGACC...GACATTAGAGACTGACAAGAAGGAAAGACATATAGTTATCAGCAAGGTGGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTTTGTGTACTTCTCCTGCTCTCTCCTTTTGCGTTCTTCTTCATCCACCTTCTGATATCTCTCTTCTaGGGTGTCAAAACCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLCVLLLLSPFAFFFIHLLISLF*GVKTTC Trigger: ACAAGTGGTTTTGACACCCCAGAAGAGAGATATCAG...AAGGTGGATGAAGAAGAACGCAAAAGGAGAGAGCAGGAGAAGTACACAAAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000229042.2 ENSMUST00000231003.2 |
||
| 3UTR CAA 72 bp | TCCTGCTCTCTCCTTTTGCGTTCTTCTTCATCCACCTaGCTGATAACTATATGTCTTTCCTTCTTGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SCSLLLRSSSST*LITICLSFLSV Trigger: GACTGACAAGAAGGAAAGACATATAGTTATCAGCAAGGTGGATGAAGAAGAACGCAAAAGGAGAGAGCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229042.2 ENSMUST00000231003.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGGACAATAGATGCAGCCAAAACAGTAAAAAGTAGCTTTGCAGGAAACAATTCCATTGCTGATTCCTaGAAACTCCCCATCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGTIDAAKTVKSSFAGNNSIADS*KLPIDG Trigger: GCCATCGATGGGGAGTTTTCAGGAATCAGCAATGGA...ATTGTTTCCTGCAAAGCTACTTTTTACTGTTTTGGCTGCATCTATTGTCCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR TCA 90 bp | CGTTCTTCTTCATCCACCTTGCTGATAACTATATGTCTTTCCTTCTTGTCAGTCGCACAAAGGCCAAACTaGAACAGCAAAAAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RSSSSTLLITICLSFLSVAQRPN*NSKKSM Trigger: CATGGACTTTTTGCTGTTTCAGTTTGGCCTTTGTGC...GACTGACAAGAAGGAAAGACATATAGTTATCAGCAAGGTGGATGAAGAAGAACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229042.2 ENSMUST00000231003.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTGATAAATAAGTTTTCTTTGGAACCTGTGACAGAAAGACCACATCCAAGCTCTGGCAAACAAACTTaGCATCTGGTGAGGACCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SLINKFSLEPVTERPHPSSGKQT*HLVRTY Trigger: GTAGGTCCTCACCAGATGTCAAGTTTGTTTGCCAGA...GCTTGGATGTGGTCTTTCTGTCACAGGTTCCAAAGAAAACTTATTTATCAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTTCATCCACCTTGCTGATAACTATATGTCTTTCCTTCTTGTCAGTCTCAGTCAGCCTCCTCTATaGCCTGGTACACTTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FFFIHLADNYMSFLLVSLSQPPL*PGTLCE Trigger: TTCACAAAGTGTACCAGGCCATAGAGGAGGCTGACT...GAGACTGACAAGAAGGAAAGACATATAGTTATCAGCAAGGTGGATGAAGAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229042.2 ENSMUST00000231003.2 |
||
| CDS-3UTR CCA 90 bp | GCACTTTCAACTTTGGGAGGGTCAAAAGGTGTCTCTTTCAACCGCTTTTCCAACTGCTTGGAATCTGTGTaGTCATACTTAAAAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: ALSTLGGSKGVSFNRFSNCLESV*SYLKAQ Trigger: TTGTGCTTTTAAGTATGACCACACAGATTCCAAGCA...GTTGGAAAAGCGGTTGAAAGAGACACCTTTTGACCCTCCCAAAGTTGAAAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGGACAATAGATGCAGCCAAAACAGTAAAAAGTAGCTTTGCAGGAAACAATGGGTTCAATGAGCTTTaGTCTGGCAGACACACACAT | + |
|
Preference number: 4 (lower is better) Translates to: KGTIDAAKTVKSSFAGNNGFNEL*SGRHTH Trigger: ATGTGTGTGTCTGCCAGATCAAAGCTCATTGAACCC...ATTGTTTCCTGCAAAGCTACTTTTTACTGTTTTGGCTGCATCTATTGTCCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR TCA 90 bp | AGTCTGATAAATAAGTTTTCTTTGGAACCTGTGACAGAAAGACCACATCCAAGCTGCCTTTCTTCTTCCTaGTTCAGATATGGAATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLINKFSLEPVTERPHPSCLSSS*FRYGIP Trigger: TGGGATTCCATATCTGAATCAGGAAGAAGAAAGGCA...GCTTGGATGTGGTCTTTCTGTCACAGGTTCCAAAGAAAACTTATTTATCAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGGACAATAGATGCAGCCAAAACAGTAAAAAGTAGCTTTGCAGGAAACAATCTGATATCTCTCTTCTaGGGTGTCAAAACCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGTIDAAKTVKSSFAGNNLISLF*GVKTTC Trigger: ACAAGTGGTTTTGACACCCCAGAAGAGAGATATCAG...ATTGTTTCCTGCAAAGCTACTTTTTACTGTTTTGGCTGCATCTATTGTCCCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CCA 90 bp | ACCTTGCTGATAACTATATGTCTTTCCTTCTTGTCAGTCTCTAATGTCTCAACACTGATATCTCTCTTCTaGGGTGTCAAAACCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLLITICLSFLSVSNVSTLISLF*GVKTTC Trigger: ACAAGTGGTTTTGACACCCCAGAAGAGAGATATCAG...TGTTGAGACATTAGAGACTGACAAGAAGGAAAGACATATAGTTATCAGCAAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229042.2 ENSMUST00000231003.2 |
||
| 3UTR CAA 72 bp | CTTCTTCTAGCATCTCAAATTAAAATGCATCACTCCTaGTGTCTTAAAGGCTCACATCTGAATATTCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: LLLASQIKMHHS*CLKGSHLNIQT Trigger: GGTCTGAATATTCAGATGTGAGCCTTTAAGACACAAGGAGTGATGCATTTTAATTTGAGATGCTAGAAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTGCTGATAACTATATGTCTTTCCTTCTTGTCAGTCTCTAATGTCTCAACATACTTGGAATCTGTGTaGTCATACTTAAAAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: TLLITICLSFLSVSNVSTYLESV*SYLKAQ Trigger: TTGTGCTTTTAAGTATGACCACACAGATTCCAAGTA...TGTTGAGACATTAGAGACTGACAAGAAGGAAAGACATATAGTTATCAGCAAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229042.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGCTGTTTCTGGGCAGCAGTGGGAGGATGGCAGGGCACATCTCGGGCAGGATCTGTCCACTTCCTCTaGACCTGCTTGCCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VCCFWAAVGGWQGTSRAGSVHFL*TCLPFC Trigger: GCAGAAAGGCAAGCAGGTCAAGAGGAAGTGGACAGA...TCCTGCCCGAGATGTGCCCTGCCATCCTCCCACTGCTGCCCAGAAACAGCACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTTTCTGGGCAGCAGTGGGAGGATGGCAGGGCACATCTCGGGCAGGAGAGGTATTAACGGCAATTaGTACTTGTTCTGGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLFLGSSGRMAGHISGRRGINGN*YLFWLA Trigger: AGCCAGCCAGAACAAGTACAAATTGCCGTTAATACC...TCTCCTGCCCGAGATGTGCCCTGCCATCCTCCCACTGCTGCCCAGAAACAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CAA 90 bp | GCAGCAGTGGGAGGATGGCAGGGCACATCTCGGGCAGGAGAAGCTCTGCAGAAAGGGTGTCAAAACCACTaGTTAATGCTGTTACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAVGGWQGTSRAGEALQKGCQNH*LMLLLR Trigger: CCTCAGTAACAGCATTAACAAGTGGTTTTGACACCC...TTTCTGCAGAGCTTCTCCTGCCCGAGATGTGCCCTGCCATCCTCCCACTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
||
| CDS-3UTR CAA 90 bp | TTGGGGAAGGTCACGTGGAGAACATGGTCCCGCTTAGGCTGCAAGTCTGGCCCTCTCTGGCAAACAAACTaGACATCTGGTGAGGACCTA | + |
|
Preference number: 5 (lower is better) Translates to: LGKVTWRTWSRLGCKSGPLWQTN*TSGEDL Trigger: TAGGTCCTCACCAGATGTCAAGTTTGTTTGCCAGAG...AGGGCCAGACTTGCAGCCTAAGCGGGACCATGTTCTCCACGTGACCTTCCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
||
| CDS-3UTR CAA 90 bp | CAGGTGCCTCCTGCTCTAGCCACACAGGCAGAAACACGCATACCATCATGCTGGTCCTGCCCCATTGGCTaGAGACCGTTTTTCATCGAA | + |
|
Preference number: 5 (lower is better) Translates to: QVPPALATQAETRIPSCWSCPIG*RPFFIE Trigger: TTCGATGAAAAACGGTCTCAAGCCAATGGGGCAGGA...CCAGCATGATGGTATGCGTGTTTCTGCCTGTGTGGCTAGAGCAGGAGGCACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| CDS-3UTR CAA 90 bp | CGTGGTTCACAGCTGACTTACTCCCTGGGTGGACTTGCCAACATTCACCAGGGCACATCCAAGAGCATGTaGTGTCCCACAACCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: RGSQLTYSLGGLANIHQGTSKSM*CPTTSF Trigger: GAAGCTGGTTGTGGGACACAACATGCTCTTGGATGT...GCCCTGGTGAATGTTGGCAAGTCCACCCAGGGAGTAAGTCAGCTGTGAACCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| CDS-3UTR CAA 90 bp | ACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTGCACCGTGAACCCTGTGCTGGTTTTCCACTCTTaGGGGAAGGTCACGTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: TQRHTVKTRRSCCTVNPVLVFHS*GKVTWR Trigger: TCTCCACGTGACCTTCCCCAAAGAGTGGAAAACCAG...CACAGGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| CDS-3UTR CAA 90 bp | ACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTGCACCGTGAACCCTGTGTCCTGCCCCATTGGCTaGAGACCGTTTTTCATCGAA | + |
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Preference number: 5 (lower is better) Translates to: TQRHTVKTRRSCCTVNPVSCPIG*RPFFIE Trigger: TTCGATGAAAAACGGTCTCAAGCCAATGGGGCAGGA...CACAGGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| CDS-3UTR CAA 90 bp | AGACACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTGCACCGTGAACCCCTCTGGCAAACAAACTaGACATCTGGTGAGGACCTA | + |
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Preference number: 5 (lower is better) Translates to: RHTKTYSKNQEKLLHREPLWQTN*TSGEDL Trigger: TAGGTCCTCACCAGATGTCAAGTTTGTTTGCCAGAG...GGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| CDS-3UTR CAA 90 bp | ACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTGCACCGTGAACCCTGTGTCTGCACTTTCAACTTaGGGAGGGTCAAAAGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: TQRHTVKTRRSCCTVNPVSALST*GGSKGV Trigger: GACACCTTTTGACCCTCCCAAAGTTGAAAGTGCAGA...CACAGGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| CDS-3UTR CAA 90 bp | CTTGACCTGCTTGCCTTTCTGCTTCTTTCCCACATACTCAGCATAGGTCTGGATGGGTGTCAAAACCACTaGTTAATGCTGTTACTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LDLLAFLLLSHILSIGLDGCQNH*LMLLLR Trigger: CCTCAGTAACAGCATTAACAAGTGGTTTTGACACCC...ATCCAGACCTATGCTGAGTATGTGGGAAAGAAGCAGAAAGGCAAGCAGGTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| CDS-3UTR CAA 90 bp | GGTGGACTTGCCAACATTCACCAGGGCAGGCAGGTTTTCAAGGAGCAGGAAGTAATTCGTTTTAACTTCTaGGACTTTTTCCTTCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: GGLANIHQGRQVFKEQEVIRFNF*DFFLPS Trigger: AGAGGGAAGGAAAAAGTCCAAGAAGTTAAAACGAAT...TACTTCCTGCTCCTTGAAAACCTGCCTGCCCTGGTGAATGTTGGCAAGTCCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| CDS TCA 90 bp | AGGAAATCCTCTATCTTCTCTATTACTTGGTCAATAAACTTCTTCTaGTCCTCAGGGATGGTCACAGGACATTTTGCCAGAGCTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: RKSSIFSITWSINFF*SSGMVTGHFARAPA Trigger: GGCAGGAGCTCTGGCAAAATGTCCTGTGACCATCCCTGAGGATCAGAAGAAGTTTATTGACCAAGTAATAGAGAAGATAGAGGATTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058884.10 ENSMUST00000231003.2 |
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| CDS-3UTR CAA 90 bp | ACACAAAGACATACAGTAAAAACCAGGAGAAGCTGCTGCACCGTGAACCCTGTGATAAATAAGTTTTCTTaGGAACCCAGTGCATGGGTC | + |
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Preference number: 5 (lower is better) Translates to: TQRHTVKTRRSCCTVNPVINKFS*EPSAWV Trigger: GACCCATGCACTGGGTTCCAAAGAAAACTTATTTAT...CACAGGGTTCACGGTGCAGCAGCTTCTCCTGGTTTTTACTGTATGTCTTTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058884.10 |
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| CDS-3UTR CAA 90 bp | CGTTCTTCTTCATCCACCTTGCTGATAACTATATGTCTTTCCTTCTTGTCAGTCGGGTGTCAAAACCACTaGTTAATGCTGTTACTGAGG | + |
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Preference number: 5 (lower is better) Translates to: RSSSSTLLITICLSFLSVGCQNH*LMLLLR Trigger: CCTCAGTAACAGCATTAACAAGTGGTTTTGACACCC...GACTGACAAGAAGGAAAGACATATAGTTATCAGCAAGGTGGATGAAGAAGAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229042.2 ENSMUST00000231003.2 |
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| CDS TCA 90 bp | GACCGTTTTTCATCGAATTGCTCTCTCAGCTGCCTTTCTTCTTCCTaGTTCAGATATGGAATCCCACTGCAAAACACTTTATTAAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: DRFSSNCSLSCLSSS*FRYGIPLQNTLLKS Trigger: TGACTTTAATAAAGTGTTTTGCAGTGGGATTCCATATCTGAATCAGGAAGAAGAAAGGCAGCTGAGAGAGCAATTCGATGAAAAACGGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058884.10 ENSMUST00000231003.2 |
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| CDS CCA 72 bp | GGAAACAGAGGCAGGTGCATCTGTTGGTCCAGTGCATaGGTCAAGTTCCAGGCTCCTCTTCTCTTCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: GNRGRCICWSSA*VKFQAPLLFTL Trigger: CAAAGTGAAGAGAAGAGGAGCCTGGAACTTGACCCATGCACTGGACCAACAGATGCACCTGCCTCTGTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231003.2 |
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| CDS CAA 72 bp | TCCTGCCCCATTGGCTTGAGACCGTTTTTCATCGAATaGCTCTCTCAGCTGCCTTTCTTCTTCCTGATTCAG | + |
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Preference number: 6 (lower is better) Translates to: SCPIGLRPFFIE*LSQLPFFFLIQ Trigger: CTGAATCAGGAAGAAGAAAGGCAGCTGAGAGAGCAATTCGATGAAAAACGGTCTCAAGCCAATGGGGCAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058884.10 ENSMUST00000231003.2 |
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| CDS CAA 90 bp | TGCCAGAGCTCCTGCCCCATTGGCTTGAGACCGTTTTTCATCGAATaGCTCTCTCAGCTGCCTTTCTTCTTCCTGATTCAGATATGGAAT | + |
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Preference number: 6 (lower is better) Translates to: CQSSCPIGLRPFFIE*LSQLPFFFLIQIWN Trigger: ATTCCATATCTGAATCAGGAAGAAGAAAGGCAGCTGAGAGAGCAATTCGATGAAAAACGGTCTCAAGCCAATGGGGCAGGAGCTCTGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058884.10 ENSMUST00000231003.2 |
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| CDS TCA 72 bp | AACCACTTGTTAATGCTGTTACTGAGGGTCCATTGCTaGTTCCTGAAAACTCCCCATCGATGGCGAAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: NHLLMLLLRVHC*FLKTPHRWRRS Trigger: ACTTCTTCGCCATCGATGGGGAGTTTTCAGGAATCAGCAATGGACCCTCAGTAACAGCATTAACAAGTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058884.10 ENSMUST00000229042.2 ENSMUST00000231003.2 |
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| CDS TCA 72 bp | AATGCTGGAGCTCTGGCAAACAAACTTGACATCTGGTaGGGACCTACTGAAAGGCTTGGGGAAAACATAGAA | + |
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Preference number: 6 (lower is better) Translates to: NAGALANKLDIW*GPTERLGENIE Trigger: TTCTATGTTTTCCCCAAGCCTTTCAGTAGGTCCTCACCAGATGTCAAGTTTGTTTGCCAGAGCTCCAGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058884.10 ENSMUST00000231003.2 |
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| CDS CAA 72 bp | AATCCCACTGCAAAACACTTTATTAAAGTCAAATCCTaGGCTCGCCAGGAAGTCAATGCTGGAGCTCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: NPTAKHFIKVKS*ARQEVNAGALA Trigger: TGCCAGAGCTCCAGCATTGACTTCCTGGCGAGCCAAGGATTTGACTTTAATAAAGTGTTTTGCAGTGGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058884.10 ENSMUST00000231003.2 |
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| CDS CAA 90 bp | CAGATATGGAATCCCACTGCAAAACACTTTATTAAAGTCAAATCCTaGGCTCGCCAGGAAGTCAATGCTGGAGCTCTGGCAAACAAACTT | + |
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Preference number: 6 (lower is better) Translates to: QIWNPTAKHFIKVKS*ARQEVNAGALANKL Trigger: AAGTTTGTTTGCCAGAGCTCCAGCATTGACTTCCTGGCGAGCCAAGGATTTGACTTTAATAAAGTGTTTTGCAGTGGGATTCCATATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058884.10 ENSMUST00000231003.2 |
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| CDS TCA 72 bp | AAGAAGTCAGCCTCCTCTATGGCCTGGTACACTTTGTaGAGATTAATCTTAAAATTGCTCCGGATTATCTCC | + |
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Preference number: 6 (lower is better) Translates to: KKSASSMAWYTL*RLILKLLRIIS Trigger: GGAGATAATCCGGAGCAATTTTAAGATTAATCTTCACAAAGTGTACCAGGCCATAGAGGAGGCTGACTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058884.10 ENSMUST00000229042.2 ENSMUST00000231003.2 |
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| CDS TCA 72 bp | CCTACTGAAAGGCTTGGGGAAAACATAGAAGTTAAATaGCTTCGTTACATGCTTGGAATCTGTGTGGTCATA | + |
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Preference number: 6 (lower is better) Translates to: PTERLGENIEVK*LRYMLGICVVI Trigger: TATGACCACACAGATTCCAAGCATGTAACGAAGTCATTTAACTTCTATGTTTTCCCCAAGCCTTTCAGTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058884.10 ENSMUST00000231003.2 |
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| CDS TCA 72 bp | TCTATCTTCTCTATTACTTGGTCAATAAACTTCTTCTaGTCCTCAGGGATGGTCACAGGACATTTTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SIFSITWSINFF*SSGMVTGHFAR Trigger: TCTGGCAAAATGTCCTGTGACCATCCCTGAGGATCAGAAGAAGTTTATTGACCAAGTAATAGAGAAGATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058884.10 ENSMUST00000231003.2 |
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| CDS CCA 72 bp | CTCTCTCAGCTGCCTTTCTTCTTCCTGATTCAGATATaGAATCCCACTGCAAAACACTTTATTAAAGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LSQLPFFFLIQI*NPTAKHFIKVK Trigger: TTTGACTTTAATAAAGTGTTTTGCAGTGGGATTCCATATCTGAATCAGGAAGAAGAAAGGCAGCTGAGAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058884.10 ENSMUST00000231003.2 |
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