Pregenerated sensors for PARM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034981Ensembl transcript IDs: ENSMUST00000040576.10
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGCAGCCCCCACCTCATGGTATCTGGCTTGGTCAGTGCAAAGATaGCCCGTGTCAGCTGCAAACCGGCCTCCACCAACGGCTTTTCCG | + |
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Preference number: 1 (lower is better) Translates to: SAAPTSWYLAWSVQR*PVSAANRPPPTAFP Trigger: CGGAAAAGCCGTTGGTGGAGGCCGGTTTGCAGCTGACACGGGCCATCTTTGCACTGACCAAGCCAGATACCATGAGGTGGGGGCTGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR GCA 90 bp | AGGGGTCAGGGTAGGAAGGTCAAGTGTGGTCAGAGGGCACACCCTTaGAAGGTGTGTCTGTCTGTCTGTCTGTCTGTTGCCTGTTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: RGQGRKVKCGQRAHP*KVCLSVCLSVACWV Trigger: CACCCAACAGGCAACAGACAGACAGACAGACAGACACACCTTGCAAGGGTGTGCCCTCTGACCACACTTGACCTTCCTACCCTGACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR TCA 90 bp | GGCATCCAGGTGTGGCATGCTAACCTGGATCCTGATGCAGGTTTGTaGGACCTGTGTCCTGGACCACCTTTTCAGCTGGAGGGAGACATC | + |
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Preference number: 1 (lower is better) Translates to: GIQVWHANLDPDAGL*DLCPGPPFQLEGDI Trigger: GATGTCTCCCTCCAGCTGAAAAGGTGGTCCAGGACACAGGTCTCACAAACCTGCATCAGGATCCAGGTTAGCATGCCACACCTGGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR CCA 90 bp | CCTCCCAGCTTTGCTTGTGGGTTGGGAATTCCTGTTGCCTTTGGGTaGCCTAGATGGGGAAAGCAGGTTGAGAGCCTGCTGATTGACAGC | + |
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Preference number: 1 (lower is better) Translates to: PPSFACGLGIPVAFG*PRWGKQVESLLIDS Trigger: GCTGTCAATCAGCAGGCTCTCAACCTGCTTTCCCCATCTAGGCCACCCAAAGGCAACAGGAATTCCCAACCCACAAGCAAAGCTGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR CCA 90 bp | TCCCTGTCTGCTCTTCAAGCTCACCTCCCAGCTTTGCTTGTGGGTTaGGAATTCCTGTTGCCTTTGGGTGGCCTAGATGGGGAAAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: SLSALQAHLPALLVG*EFLLPLGGLDGESR Trigger: CCTGCTTTCCCCATCTAGGCCACCCAAAGGCAACAGGAATTCCCAACCCACAAGCAAAGCTGGGAGGTGAGCTTGAAGAGCAGACAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR CCA 90 bp | TTTGCTTGTGGGTTGGGAATTCCTGTTGCCTTTGGGTGGCCTAGATaGGGAAAGCAGGTTGAGAGCCTGCTGATTGACAGCCTGCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: FACGLGIPVAFGWPR*GKQVESLLIDSLLC Trigger: GCACAGCAGGCTGTCAATCAGCAGGCTCTCAACCTGCTTTCCCCATCTAGGCCACCCAAAGGCAACAGGAATTCCCAACCCACAAGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR GCA 90 bp | CCAGAAGCCCCTGCTCCTTCCACACAGAGTGGCAGTCGCCCGGGATaGGTTCCTTTCTCCTCACTGATATTTAATGTCATTTCCTGTAGC | + |
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Preference number: 1 (lower is better) Translates to: PEAPAPSTQSGSRPG*VPFSSLIFNVISCS Trigger: GCTACAGGAAATGACATTAAATATCAGTGAGGAGAAAGGAACGCATCCCGGGCGACTGCCACTCTGTGTGGAAGGAGCAGGGGCTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR GCA 90 bp | GATACAACCAGGCAAACAAGGATTGAAAAGGAATCCAGAAGCCCCTaGTCCTTCCACACAGAGTGGCAGTCGCCCGGGATGCGTTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: DTTRQTRIEKESRSP*SFHTEWQSPGMRSF Trigger: AAAGGAACGCATCCCGGGCGACTGCCACTCTGTGTGGAAGGAGCAGGGGCTTCTGGATTCCTTTTCAATCCTTGTTTGCCTGGTTGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR CCA 90 bp | CCCGTGTCAGCTGCAAACCGGCCTCCACCAACGGCTTTTCCGAGATaGTTCTTTTGTATCAGAAGGGAGACATTCTGTAGTAGCAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: PVSAANRPPPTAFPR*FFCIRRETFCSSSQ Trigger: CTGGCTGCTACTACAGAATGTCTCCCTTCTGATACAAAAGAACCATCTCGGAAAAGCCGTTGGTGGAGGCCGGTTTGCAGCTGACACGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR CCA 90 bp | TCTCCCACTACCATGGAGAGCTGGCTCCTGCTTGCTTCAGGAGAGTaGGTGGTGCATGTAAGCTTTTGTCTTTCTCTTCAATCCCATCCC | + |
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Preference number: 1 (lower is better) Translates to: SPTTMESWLLLASGE*VVHVSFCLSLQSHP Trigger: GGGATGGGATTGAAGAGAAAGACAAAAGCTTACATGCACCACCCACTCTCCTGAAGCAAGCAGGAGCCAGCTCTCCATGGTAGTGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR CCA 90 bp | GGGGTAGGGGGTGGGAGGGTTGAGAGTTACGCAATCACCTCCTGGTaGGTCAGAAGTGAAAGAAGCAGATATTGGCAAAGAAGAACGATC | + |
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Preference number: 1 (lower is better) Translates to: GVGGGRVESYAITSW*VRSERSRYWQRRTI Trigger: GATCGTTCTTCTTTGCCAATATCTGCTTCTTTCACTTCTGACCCACCAGGAGGTGATTGCGTAACTCTCAACCCTCCCACCCCCTACCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR TCA 90 bp | CATAGGATCGAACCATGCACCCTTGCAAGCAAGACGAAGGGCAGATaGCATCAGATCATAATCTACTCCTCCGAGACCTCGGGGTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: HRIEPCTLASKTKGR*HQIIIYSSETSGCE Trigger: TTCACACCCCGAGGTCTCGGAGGAGTAGATTATGATCTGATGTCATCTGCCCTTCGTCTTGCTTGCAAGGGTGCATGGTTCGATCCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR GCA 90 bp | TTCTCTTCAATCCCATCCCTTAGACTCCGCATGTCTCTCCCTGTCTaGTCTTCAAGCTCACCTCCCAGCTTTGCTTGTGGGTTGGGAATT | + |
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Preference number: 1 (lower is better) Translates to: FSSIPSLRLRMSLPV*SSSSPPSFACGLGI Trigger: AATTCCCAACCCACAAGCAAAGCTGGGAGGTGAGCTTGAAGAGCAGACAGGGAGAGACATGCGGAGTCTAAGGGATGGGATTGAAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR GCA 90 bp | GGGAAGATAGGGGCCCATCAGGGCCATGGGAAAAGAAAGCATAGTTaGCTACCATTCTTTGACCATTTGCAGTCCATGGAGAAGAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: GKIGAHQGHGKRKHS*LPFFDHLQSMEKRL Trigger: GAGCCTCTTCTCCATGGACTGCAAATGGTCAAAGAATGGTAGGCAACTATGCTTTCTTTTCCCATGGCCCTGATGGGCCCCTATCTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR TCA 90 bp | GGACTAAGTAGGCATCCTGTCAGATACAACCAGGCAAACAAGGATTaGAAAGGAATCCAGAAGCCCCTGCTCCTTCCACACAGAGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: GLSRHPVRYNQANKD*KGIQKPLLLPHRVA Trigger: TGCCACTCTGTGTGGAAGGAGCAGGGGCTTCTGGATTCCTTTTCAATCCTTGTTTGCCTGGTTGTATCTGACAGGATGCCTACTTAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR CCA 90 bp | GCAGTGAAGCAGTTGCTGCTTTATAGGTGTGGAGCGAGAGTTCTATaGGTCCCTCCAAGCTTTAGATATCTCCCACTACCATGGAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: AVKQLLLYRCGARVL*VPPSFRYLPLPWRA Trigger: AGCTCTCCATGGTAGTGGGAGATATCTAAAGCTTGGAGGGACCCATAGAACTCTCGCTCCACACCTATAAAGCAGCAACTGCTTCACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR TCA 90 bp | GCTTACAGGTTCCCTTTAAGGACTGATCTTTCCTTTTGGCACTTCTaGGATTTAGGAAGGACTTACTTCAAAGCCTGGGGTGGTAGGTTG | + |
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Preference number: 1 (lower is better) Translates to: AYRFPLRTDLSFWHF*DLGRTYFKAWGGRL Trigger: CAACCTACCACCCCAGGCTTTGAAGTAAGTCCTTCCTAAATCTCAGAAGTGCCAAAAGGAAAGATCAGTCCTTAAAGGGAACCTGTAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR CCA 90 bp | CACCCTTGCAAGGTGTGTCTGTCTGTCTGTCTGTCTGTTGCCTGTTaGGTGTTTCATATTCAGGGATATCTTAATGTCTGCAAACCCATT | + |
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Preference number: 1 (lower is better) Translates to: HPCKVCLSVCLSVAC*VFHIQGYLNVCKPI Trigger: AATGGGTTTGCAGACATTAAGATATCCCTGAATATGAAACACCCAACAGGCAACAGACAGACAGACAGACAGACACACCTTGCAAGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR TCA 90 bp | GGTAACAACAGCACATGCCAGAAGTCAACCTATCAGGCAGCAAACTaGACACTTGGGGGAAAGAAATTGATGTTTCACTTGGTTAAAAAT | + |
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Preference number: 1 (lower is better) Translates to: GNNSTCQKSTYQAAN*TLGGKKLMFHLVKN Trigger: ATTTTTAACCAAGTGAAACATCAATTTCTTTCCCCCAAGTGTTCAGTTTGCTGCCTGATAGGTTGACTTCTGGCATGTGCTGTTGTTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR TCA 90 bp | GGGAGAGATACAATTTCTTTAAGAACAAGTCAGAGCTACTTAATGTaGCCAATAAGAACAAACCCAGTGGCCTGGGTAATAGACCATCTC | + |
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Preference number: 1 (lower is better) Translates to: GRDTISLRTSQSYLM*PIRTNPVAWVIDHL Trigger: GAGATGGTCTATTACCCAGGCCACTGGGTTTGTTCTTATTGGTCACATTAAGTAGCTCTGACTTGTTCTTAAAGAAATTGTATCTCTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR TCA 90 bp | TGGCAAAGAAGAACGATCGCTTCTCAAAATTTGTTGTACAGGATTTaGGACTGCACACCTGGAGGTCAATATTCACTTATTGAAAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: WQRRTIASQNLLYRI*DCTPGGQYSLIERK Trigger: CTTCCTTTCAATAAGTGAATATTGACCTCCAGGTGTGCAGTCTCAAATCCTGTACAACAAATTTTGAGAAGCGATCGTTCTTCTTTGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR CCA 90 bp | TGTAGACTTGAACTAACTCTCCCTGAGGTAAAGGACATCAATTATTaGCATATATTTCAGAGGTGTGTGCGCAATGTTTGTAGAATAAAT | + |
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Preference number: 1 (lower is better) Translates to: CRLELTLPEVKDINY*HIFQRCVRNVCRIN Trigger: ATTTATTCTACAAACATTGCGCACACACCTCTGAAATATATGCCAATAATTGATGTCCTTTACCTCAGGGAGAGTTAGTTCAAGTCTACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR GCA 90 bp | TTTTCAAGATGCATAGGATCGAACCATGCACCCTTGCAAGCAAGACGAAGGGCACTTGCCCTTGCCCGCTaGTCTCCTCCTGGGCACGGC | + |
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Preference number: 2 (lower is better) Translates to: FSRCIGSNHAPLQARRRALALAR*SPPGHG Trigger: GCCGTGCCCAGGAGGAGAGCAGCGGGCAAGGGCAAG...TGCCCTTCGTCTTGCTTGCAAGGGTGCATGGTTCGATCCTATGCATCTTGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR CAA 90 bp | CTCCCTGTCTGCTCTTCAAGCTCACCTCCCAGCTTTGCTTGTGGGTaGGGAATTCCTGTTGCCTTTGGGTGGCCTAGATGGGGAAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LPVCSSSSPPSFACG*GIPVAFGWPRWGKQ Trigger: CTGCTTTCCCCATCTAGGCCACCCAAAGGCAACAGGAATTCCCAACCCACAAGCAAAGCTGGGAGGTGAGCTTGAAGAGCAGACAGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR CAA 90 bp | TCCGCATGTCTCTCCCTGTCTGCTCTTCAAGCTCACCTCCCAGCTTaGCTTGTGGGTTGGGAATTCCTGTTGCCTTTGGGTGGCCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: SACLSLSALQAHLPA*LVGWEFLLPLGGLD Trigger: ATCTAGGCCACCCAAAGGCAACAGGAATTCCCAACCCACAAGCAAAGCTGGGAGGTGAGCTTGAAGAGCAGACAGGGAGAGACATGCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR GCA 90 bp | AGGTCAAGTGTGGTCAGAGGGCACACCCTTGCAAGGTGTGTCTGTCTGTCTGTCATGTCTCTCCCTGTCTaGTCTTCAAGCTCACCTCCC | + |
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Preference number: 2 (lower is better) Translates to: RSSVVRGHTLARCVCLSVMSLPV*SSSSPP Trigger: GGGAGGTGAGCTTGAAGAGCAGACAGGGAGAGACAT...GACAGACAGACAGACACACCTTGCAAGGGTGTGCCCTCTGACCACACTTGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR GCA 90 bp | GGGGCCCATCAGGGCCATGGGAAAAGAAAGCATAGTTGCCTACCATTCTTTGACGAGCTGGCTCCTGCTTaGTTCAGGAGAGTGGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: GAHQGHGKRKHSCLPFFDELAPA*FRRVGG Trigger: ACCACCCACTCTCCTGAAGCAAGCAGGAGCCAGCTC...GTCAAAGAATGGTAGGCAACTATGCTTTCTTTTCCCATGGCCCTGATGGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGAGAGTTACGCAATCACCTCCTGGTGGGTCAGAAGTGAAAGAAGCAGATCCTGTTGCCTTTGGGTaGCCTAGATGGGGAAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GLRVTQSPPGGSEVKEADPVAFG*PRWGKQ Trigger: CTGCTTTCCCCATCTAGGCCACCCAAAGGCAACAGG...ATCTGCTTCTTTCACTTCTGACCCACCAGGAGGTGATTGCGTAACTCTCAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR TCA 90 bp | GGGGCCCATCAGGGCCATGGGAAAAGAAAGCATAGTTGCCTACCATTCTTTGACTTGTTGTACAGGATTTaGGACTGCACACCTGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: GAHQGHGKRKHSCLPFFDLLYRI*DCTPGG Trigger: ACCTCCAGGTGTGCAGTCTCAAATCCTGTACAACAA...GTCAAAGAATGGTAGGCAACTATGCTTTCTTTTCCCATGGCCCTGATGGGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR TCA 90 bp | AAGAACAAACCCAGTGGCCTGGGTAATAGACCATCTCAAAATGTGAATCACCACAGGGGGTGGGAGGGTTaGGAGTTACGCAATCACCTC | + |
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Preference number: 2 (lower is better) Translates to: KNKPSGLGNRPSQNVNHHRGWEG*ELRNHL Trigger: GAGGTGATTGCGTAACTCTCAACCCTCCCACCCCCT...GTGGTGATTCACATTTTGAGATGGTCTATTACCCAGGCCACTGGGTTTGTTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAAGTGTGGTCAGAGGGCACACCCTTGCAAGGTGTGTCTGTCTGTCTGTCATGAAAGTGTCTTCCTaGTGCCAGAGTGGGATTTTT | + |
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Preference number: 2 (lower is better) Translates to: RSSVVRGHTLARCVCLSVMKVSS*CQSGIF Trigger: AAAAATCCCACTCTGGCATCAGGAAGACACTTTCAT...GACAGACAGACAGACACACCTTGCAAGGGTGTGCCCTCTGACCACACTTGACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR TCA 90 bp | GTGTCCTGGACCACCTTTTCAGCTGGAGGGAGACATCCTCTGTGGTCCCCAAAAGTCATGTGTCAAAAATaGTTTTTGGCGGACAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: VSWTTFSAGGRHPLWSPKVMCQK*FLADRG Trigger: TCCTCTGTCCGCCAAAAATCATTTTTGACACATGAC...TTTTGGGGACCACAGAGGATGTCTCCCTCCAGCTGAAAAGGTGGTCCAGGACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR CCA 90 bp | GAGACTGCACACCTGGAGGTCAATATTCACTTATTGAAAGGAAGAATGAGGGAGCCGCTGCTCTCCTCCTaGGCACGGCCTCTTTTATCT | + |
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Preference number: 2 (lower is better) Translates to: ETAHLEVNIHLLKGRMREPLLSS*ARPLLS Trigger: AGATAAAAGAGGCCGTGCCCAGGAGGAGAGCAGCGG...CTCCCTCATTCTTCCTTTCAATAAGTGAATATTGACCTCCAGGTGTGCAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTTCAATCCCATCCCTTAGACTCCGCATGTCTCTCCCTGTCTGCTCTTCACAGGCAAACAAGGATTaGAAAGGAATCCAGAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: FSSIPSLRLRMSLPVCSSQANKD*KGIQKP Trigger: GGGCTTCTGGATTCCTTTTCAATCCTTGTTTGCCTG...TGAAGAGCAGACAGGGAGAGACATGCGGAGTCTAAGGGATGGGATTGAAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR GCA 90 bp | AAGAACAAACCCAGTGGCCTGGGTAATAGACCATCTCAAAATGTGAATCACCACGAATCCAGAAGCCCCTaGTCCTTCCACACAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: KNKPSGLGNRPSQNVNHHESRSP*SFHTEW Trigger: CCACTCTGTGTGGAAGGAGCAGGGGCTTCTGGATTC...GTGGTGATTCACATTTTGAGATGGTCTATTACCCAGGCCACTGGGTTTGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR GCA 90 bp | ATTGGCAAAGAAGAACGATCGCTTCTCAAAATTTGTTGTACAGGATTTGAGACTCCTGCTGTGCCACCTTaGCCTTGCCCGCTGCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: IGKEERSLLKICCTGFETPAVPP*PCPLLS Trigger: GGAGAGCAGCGGGCAAGGGCAAGGTGGCACAGCAGG...AGTCTCAAATCCTGTACAACAAATTTTGAGAAGCGATCGTTCTTCTTTGCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR GCA 90 bp | AAGAACAAACCCAGTGGCCTGGGTAATAGACCATCTCAAAATGTGAATCACCACCAGAGGGCACACCCTTaGAAGGTGTGTCTGTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: KNKPSGLGNRPSQNVNHHQRAHP*KVCLSV Trigger: GACAGACAGACACACCTTGCAAGGGTGTGCCCTCTG...GTGGTGATTCACATTTTGAGATGGTCTATTACCCAGGCCACTGGGTTTGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR GCA 90 bp | GGGGCCCATCAGGGCCATGGGAAAAGAAAGCATAGTTGCCTACCATTCTTTGACGCTTTGAGGGGACCATaGTGGTCACTTTGTTGTATA | + |
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Preference number: 2 (lower is better) Translates to: GAHQGHGKRKHSCLPFFDALRGP*WSLCCI Trigger: TATACAACAAAGTGACCAGCATGGTCCCCTCAAAGC...GTCAAAGAATGGTAGGCAACTATGCTTTCTTTTCCCATGGCCCTGATGGGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR CCA 90 bp | TTTTCAAGATGCATAGGATCGAACCATGCACCCTTGCAAGCAAGACGAAGGGCAGGAGCGAGAGTTCTATaGGTCCCTCCAAGCTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: FSRCIGSNHAPLQARRRAGARVL*VPPSFR Trigger: TCTAAAGCTTGGAGGGACCCATAGAACTCTCGCTCC...TGCCCTTCGTCTTGCTTGCAAGGGTGCATGGTTCGATCCTATGCATCTTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR CAA 90 bp | AGAGGGCACACCCTTGCAAGGTGTGTCTGTCTGTCTGTCTGTCTGTaGCCTGTTGGGTGTTTCATATTCAGGGATATCTTAATGTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: RGHTLARCVCLSVCL*PVGCFIFRDILMSA Trigger: TGCAGACATTAAGATATCCCTGAATATGAAACACCCAACAGGCAACAGACAGACAGACAGACAGACACACCTTGCAAGGGTGTGCCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR CCA 90 bp | AAGAACAAACCCAGTGGCCTGGGTAATAGACCATCTCAAAATGTGAATCACCACTTTGGGTGGCCTAGATaGGGAAAGCAGGTTGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: KNKPSGLGNRPSQNVNHHFGWPR*GKQVES Trigger: GCTCTCAACCTGCTTTCCCCATCTAGGCCACCCAAA...GTGGTGATTCACATTTTGAGATGGTCTATTACCCAGGCCACTGGGTTTGTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR GCA 90 bp | AAGAACAAACCCAGTGGCCTGGGTAATAGACCATCTCAAAATGTGAATCACCACCATAGGATCGAACCATaGACCCTTGCAAGCAAGACG | + |
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Preference number: 2 (lower is better) Translates to: KNKPSGLGNRPSQNVNHHHRIEP*TLASKT Trigger: CGTCTTGCTTGCAAGGGTGCATGGTTCGATCCTATG...GTGGTGATTCACATTTTGAGATGGTCTATTACCCAGGCCACTGGGTTTGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR TCA 90 bp | TGCCCTCAAAAGAAGGTTAAAGGCAATGAAGGTGAATCGACGTGCAAATTAGCAACAGGTAAGGGGTCTTaGGAGGAAGCTGGTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: CPQKKVKGNEGESTCKLATGKGS*EEAGFS Trigger: AGAGAAACCAGCTTCCTCTCAAGACCCCTTACCTGT...TGCTAATTTGCACGTCGATTCACCTTCATTGCCTTTAACCTTCTTTTGAGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR TCA 90 bp | GGGGCCCATCAGGGCCATGGGAAAAGAAAGCATAGTTGCCTACCATTCTTTGACTGCTCTGTGTTTTGCTaGAAGCAATTAGAAGGTAAT | + |
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Preference number: 2 (lower is better) Translates to: GAHQGHGKRKHSCLPFFDCSVFC*KQLEGN Trigger: ATTACCTTCTAATTGCTTTCAGCAAAACACAGAGCA...GTCAAAGAATGGTAGGCAACTATGCTTTCTTTTCCCATGGCCCTGATGGGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR CCA 90 bp | TGCCCTCAAAAGAAGGTTAAAGGCAATGAAGGTGAATCGACGTGCAAATTAGCATCCCAGCTTTGCTTGTaGGTTGGGAATTCCTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: CPQKKVKGNEGESTCKLASQLCL*VGNSCC Trigger: GCAACAGGAATTCCCAACCCACAAGCAAAGCTGGGA...TGCTAATTTGCACGTCGATTCACCTTCATTGCCTTTAACCTTCTTTTGAGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR CCA 90 bp | AAGAACAAACCCAGTGGCCTGGGTAATAGACCATCTCAAAATGTGAATCACCACGTCTTGAGAGGAAGCTaGTTTCTCTGGCCTAGGATT | + |
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Preference number: 2 (lower is better) Translates to: KNKPSGLGNRPSQNVNHHVLRGS*FLWPRI Trigger: AATCCTAGGCCAGAGAAACCAGCTTCCTCTCAAGAC...GTGGTGATTCACATTTTGAGATGGTCTATTACCCAGGCCACTGGGTTTGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| 3UTR-3UTR CCA 90 bp | GGGGCCCATCAGGGCCATGGGAAAAGAAAGCATAGTTGCCTACCATTCTTTGACGCAGAAAAATGTATTTaGCAAAGTCCATTCTCACAC | + |
|
Preference number: 2 (lower is better) Translates to: GAHQGHGKRKHSCLPFFDAEKCI*QSPFSH Trigger: GTGTGAGAATGGACTTTGCCAAATACATTTTTCTGC...GTCAAAGAATGGTAGGCAACTATGCTTTCTTTTCCCATGGCCCTGATGGGCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCTCAAAAGAAGGTTAAAGGCAATGAAGGTGAATCGACGTGCAAATTAGCAACCATTTGCAGTCCATaGAGAAGAGGCTCCAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: CPQKKVKGNEGESTCKLATICSP*RRGSSS Trigger: AGAACTGGAGCCTCTTCTCCATGGACTGCAAATGGT...TGCTAATTTGCACGTCGATTCACCTTCATTGCCTTTAACCTTCTTTTGAGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CAA 90 bp | TGTACAGGATTTGAGACTGCACACCTGGAGGTCAATATTCACTTATaGAAAGGAAGAATGAGGGAGAACACACAGATAGTTCTCGATGTC | + |
|
Preference number: 2 (lower is better) Translates to: CTGFETAHLEVNIHL*KGRMRENTQIVLDV Trigger: GACATCGAGAACTATCTGTGTGTTCTCCCTCATTCTTCCTTTCAATAAGTGAATATTGACCTCCAGGTGTGCAGTCTCAAATCCTGTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CCA 90 bp | ATTGGCAAAGAAGAACGATCGCTTCTCAAAATTTGTTGTACAGGATTTGAGACTTCATGGTATCTGGCTTaGTCAGTGCAAAGATGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: IGKEERSLLKICCTGFETSWYLA*SVQRWP Trigger: GGGCCATCTTTGCACTGACCAAGCCAGATACCATGA...AGTCTCAAATCCTGTACAACAAATTTTGAGAAGCGATCGTTCTTCTTTGCCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CCA 90 bp | TTGGCAAAGAAGAACGATCGCTTCTCAAAATTTGTTGTACAGGATTTGAGACTGGCTTTGCTTGTGGGTTaGGAATTCCTGTTGCCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LAKKNDRFSKFVVQDLRLALLVG*EFLLPL Trigger: CAAAGGCAACAGGAATTCCCAACCCACAAGCAAAGC...CAGTCTCAAATCCTGTACAACAAATTTTGAGAAGCGATCGTTCTTCTTTGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCTCAAAAGAAGGTTAAAGGCAATGAAGGTGAATCGACGTGCAAATTAGCAGGAAGCTGGTTTCTCTaGCCTAGGATTTATTTTACC | + |
|
Preference number: 2 (lower is better) Translates to: CPQKKVKGNEGESTCKLAGSWFL*PRIYFT Trigger: GGTAAAATAAATCCTAGGCCAGAGAAACCAGCTTCC...TGCTAATTTGCACGTCGATTCACCTTCATTGCCTTTAACCTTCTTTTGAGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCTCAAAAGAAGGTTAAAGGCAATGAAGGTGAATCGACGTGCAAATTAGCATTGAGACTGCACACCTaGAGGTCAATATTCACTTAT | + |
|
Preference number: 2 (lower is better) Translates to: CPQKKVKGNEGESTCKLALRLHT*RSIFTY Trigger: ATAAGTGAATATTGACCTCCAGGTGTGCAGTCTCAA...TGCTAATTTGCACGTCGATTCACCTTCATTGCCTTTAACCTTCTTTTGAGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CCA 90 bp | AAGAACAAACCCAGTGGCCTGGGTAATAGACCATCTCAAAATGTGAATCACCACTATGCTGAAACCTTTTaGCCAATTCAAAAGCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: KNKPSGLGNRPSQNVNHHYAETF*PIQKQK Trigger: TTTCTGCTTTTGAATTGGCCAAAAGGTTTCAGCATA...GTGGTGATTCACATTTTGAGATGGTCTATTACCCAGGCCACTGGGTTTGTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCCTGGACCACCTTTTCAGCTGGAGGGAGACATCCTCTGTGGTCCCCAAAAGCCTGCTGTGCCACCTaGCCCTTGCCCGCTGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VSWTTFSAGGRHPLWSPKACCAT*PLPAAL Trigger: GAGAGCAGCGGGCAAGGGCAAGGTGGCACAGCAGGC...TTTTGGGGACCACAGAGGATGTCTCCCTCCAGCTGAAAAGGTGGTCCAGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR TCA 72 bp | GGTGGCCTAGATGGGGAAAGCAGGTTGAGAGCCTGCTaGTTGACAGCCTGCTGTGCCACCTTGCCCTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GGLDGESRLRAC*LTACCATLPLP Trigger: GGGCAAGGGCAAGGTGGCACAGCAGGCTGTCAATCAGCAGGCTCTCAACCTGCTTTCCCCATCTAGGCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR GCA 72 bp | CTGCAGCCCCCACCTCATGGTATCTGGCTTGGTCAGTaGAAAGATGGCCCGTGTCAGCTGCAAACCGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LQPPPHGIWLGQ*KDGPCQLQTGL Trigger: GAGGCCGGTTTGCAGCTGACACGGGCCATCTTTGCACTGACCAAGCCAGATACCATGAGGTGGGGGCTGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CCA 72 bp | CCCACCTCATGGTATCTGGCTTGGTCAGTGCAAAGATaGCCCGTGTCAGCTGCAAACCGGCCTCCACCAACG | + |
|
Preference number: 3 (lower is better) Translates to: PTSWYLAWSVQR*PVSAANRPPPT Trigger: CGTTGGTGGAGGCCGGTTTGCAGCTGACACGGGCCATCTTTGCACTGACCAAGCCAGATACCATGAGGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR GCA 72 bp | ATTGACAGCCTGCTGTGCCACCTTGCCCTTGCCCGCTaGTCTCCTCCTGGGCACGGCCTCTTTTATCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: IDSLLCHLALAR*SPPGHGLFYLS Trigger: TGAAAGATAAAAGAGGCCGTGCCCAGGAGGAGAGCAGCGGGCAAGGGCAAGGTGGCACAGCAGGCTGTCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CCA 72 bp | AAGGAATCCAGAAGCCCCTGCTCCTTCCACACAGAGTaGCAGTCGCCCGGGATGCGTTCCTTTCTCCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: KESRSPCSFHTE*QSPGMRSFLLT Trigger: AGTGAGGAGAAAGGAACGCATCCCGGGCGACTGCCACTCTGTGTGGAAGGAGCAGGGGCTTCTGGATTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCAAGTGTGGTCAGAGGGCACACCCTTGCAAGGTGTGTCTGTCTGTCTGTCGCTCACCTCCCAGCTTaGCTTGTGGGTTGGGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: RSSVVRGHTLARCVCLSVAHLPA*LVGWEF Trigger: GAATTCCCAACCCACAAGCAAAGCTGGGAGGTGAGC...GACAGACAGACAGACACACCTTGCAAGGGTGTGCCCTCTGACCACACTTGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CAA 90 bp | GGGGCCCATCAGGGCCATGGGAAAAGAAAGCATAGTTGCCTACCATTCTTTGACAGAGCTGGCTCCTGCTaGCTTCAGGAGAGTGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: GAHQGHGKRKHSCLPFFDRAGSC*LQESGW Trigger: CCACCCACTCTCCTGAAGCAAGCAGGAGCCAGCTCT...GTCAAAGAATGGTAGGCAACTATGCTTTCTTTTCCCATGGCCCTGATGGGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR TCA 72 bp | CTAGACATCTCAGATAGGGGTAGGGGGTGGGAGGGTTaGGAGTTACGCAATCACCTCCTGGTGGGTCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LDISDRGRGWEG*ELRNHLLVGQK Trigger: CTTCTGACCCACCAGGAGGTGATTGCGTAACTCTCAACCCTCCCACCCCCTACCCCTATCTGAGATGTCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR GCA 72 bp | AGGCAAACAAGGATTGAAAAGGAATCCAGAAGCCCCTaGTCCTTCCACACAGAGTGGCAGTCGCCCGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: RQTRIEKESRSP*SFHTEWQSPGM Trigger: CATCCCGGGCGACTGCCACTCTGTGTGGAAGGAGCAGGGGCTTCTGGATTCCTTTTCAATCCTTGTTTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR GCA 72 bp | ATCCCATCCCTTAGACTCCGCATGTCTCTCCCTGTCTaGTCTTCAAGCTCACCTCCCAGCTTTGCTTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: IPSLRLRMSLPV*SSSSPPSFACG Trigger: CCCACAAGCAAAGCTGGGAGGTGAGCTTGAAGAGCAGACAGGGAGAGACATGCGGAGTCTAAGGGATGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR GCA 72 bp | GGTAGGAAGGTCAAGTGTGGTCAGAGGGCACACCCTTaGAAGGTGTGTCTGTCTGTCTGTCTGTCTGTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GRKVKCGQRAHP*KVCLSVCLSVA Trigger: GGCAACAGACAGACAGACAGACAGACACACCTTGCAAGGGTGTGCCCTCTGACCACACTTGACCTTCCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CCA 72 bp | GGGTTGGGAATTCCTGTTGCCTTTGGGTGGCCTAGATaGGGAAAGCAGGTTGAGAGCCTGCTGATTGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: GLGIPVAFGWPR*GKQVESLLIDS Trigger: GCTGTCAATCAGCAGGCTCTCAACCTGCTTTCCCCATCTAGGCCACCCAAAGGCAACAGGAATTCCCAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CCA 72 bp | GCTCTTCAAGCTCACCTCCCAGCTTTGCTTGTGGGTTaGGAATTCCTGTTGCCTTTGGGTGGCCTAGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: ALQAHLPALLVG*EFLLPLGGLDG Trigger: CCCATCTAGGCCACCCAAAGGCAACAGGAATTCCCAACCCACAAGCAAAGCTGGGAGGTGAGCTTGAAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CCA 72 bp | GGAAGTGCTGAGGCATCCAGGTGTGGCATGCTAACCTaGATCCTGATGCAGGTTTGTGAGACCTGTGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSAEASRCGMLT*ILMQVCETCVL Trigger: CAGGACACAGGTCTCACAAACCTGCATCAGGATCCAGGTTAGCATGCCACACCTGGATGCCTCAGCACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCAAGTGTGGTCAGAGGGCACACCCTTGCAAGGTGTGTCTGTCTGTCTGTCGAATTCCTGTTGCCTTaGGGTGGCCTAGATGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RSSVVRGHTLARCVCLSVEFLLP*GGLDGE Trigger: TTCCCCATCTAGGCCACCCAAAGGCAACAGGAATTC...GACAGACAGACAGACACACCTTGCAAGGGTGTGCCCTCTGACCACACTTGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR TCA 72 bp | GTGTGGCATGCTAACCTGGATCCTGATGCAGGTTTGTaGGACCTGTGTCCTGGACCACCTTTTCAGCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VWHANLDPDAGL*DLCPGPPFQLE Trigger: CTCCAGCTGAAAAGGTGGTCCAGGACACAGGTCTCACAAACCTGCATCAGGATCCAGGTTAGCATGCCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR GCA 72 bp | TCTCCCTGTCTGCTCTTCAAGCTCACCTCCCAGCTTTaGTTGTGGGTTGGGAATTCCTGTTGCCTTTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SPCLLFKLTSQL*LWVGNSCCLWV Trigger: CACCCAAAGGCAACAGGAATTCCCAACCCACAAGCAAAGCTGGGAGGTGAGCTTGAAGAGCAGACAGGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CCA 72 bp | TTTGCTTGTGGGTTGGGAATTCCTGTTGCCTTTGGGTaGCCTAGATGGGGAAAGCAGGTTGAGAGCCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FACGLGIPVAFG*PRWGKQVESLL Trigger: CAGCAGGCTCTCAACCTGCTTTCCCCATCTAGGCCACCCAAAGGCAACAGGAATTCCCAACCCACAAGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR GCA 72 bp | GATATCTCCCACTACCATGGAGAGCTGGCTCCTGCTTaGTTCAGGAGAGTGGGTGGTGCATGTAAGCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: DISHYHGELAPA*FRRVGGACKLL Trigger: CAAAAGCTTACATGCACCACCCACTCTCCTGAAGCAAGCAGGAGCCAGCTCTCCATGGTAGTGGGAGATATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CCA 72 bp | GGGGGTGGGAGGGTTGAGAGTTACGCAATCACCTCCTaGTGGGTCAGAAGTGAAAGAAGCAGATATTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GGGRVESYAITS*WVRSERSRYWQ Trigger: TTGCCAATATCTGCTTCTTTCACTTCTGACCCACCAGGAGGTGATTGCGTAACTCTCAACCCTCCCACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCTCAAAAGAAGGTTAAAGGCAATGAAGGTGAATCGACGTGCAAATTAGCATGTGCCACCTTGCCCTaGCCCGCTGCTCTCCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CPQKKVKGNEGESTCKLACATLP*PAALLL Trigger: CAGGAGGAGAGCAGCGGGCAAGGGCAAGGTGGCACA...TGCTAATTTGCACGTCGATTCACCTTCATTGCCTTTAACCTTCTTTTGAGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CAA 90 bp | AAAACAGCTAACTCAACATCAGTCAGGTGTGCGGGAGGGAAGTTTCAGAGCTCTGCCTGGGGTGGTAGGTaGTGGGAAGTACCCCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: KTANSTSVRCAGGKFQSSAWGGR*WEVPLF Trigger: AAACAGGGGTACTTCCCACAACCTACCACCCCAGGC...AGAGCTCTGAAACTTCCCTCCCGCACACCTGACTGATGTTGAGTTAGCTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CAA 90 bp | GGCAAACAAGGATTGAAAAGGAATCCAGAAGCCCCTGCTCCTTCCACACAGAGTCTCATGGTATCTGGCTaGGTCAGTGCAAAGATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GKQGLKRNPEAPAPSTQSLMVSG*VSAKMA Trigger: GGCCATCTTTGCACTGACCAAGCCAGATACCATGAG...ACTCTGTGTGGAAGGAGCAGGGGCTTCTGGATTCCTTTTCAATCCTTGTTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR TCA 72 bp | GAACCATGCACCCTTGCAAGCAAGACGAAGGGCAGATaGCATCAGATCATAATCTACTCCTCCGAGACCTCG | + |
|
Preference number: 3 (lower is better) Translates to: EPCTLASKTKGR*HQIIIYSSETS Trigger: CGAGGTCTCGGAGGAGTAGATTATGATCTGATGTCATCTGCCCTTCGTCTTGCTTGCAAGGGTGCATGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR GCA 72 bp | GGGGCCCATCAGGGCCATGGGAAAAGAAAGCATAGTTaGCTACCATTCTTTGACCATTTGCAGTCCATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GAHQGHGKRKHS*LPFFDHLQSME Trigger: CTCCATGGACTGCAAATGGTCAAAGAATGGTAGGCAACTATGCTTTCTTTTCCCATGGCCCTGATGGGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCCTGGACCACCTTTTCAGCTGGAGGGAGACATCCTCTGTGGTCCCCAAAATCCGAGATGGTTCTTTaGTATCAGAAGGGAGACATT | + |
|
Preference number: 3 (lower is better) Translates to: VSWTTFSAGGRHPLWSPKSEMVL*YQKGDI Trigger: AATGTCTCCCTTCTGATACAAAAGAACCATCTCGGA...TTTTGGGGACCACAGAGGATGTCTCCCTCCAGCTGAAAAGGTGGTCCAGGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCCTGGACCACCTTTTCAGCTGGAGGGAGACATCCTCTGTGGTCCCCAAAAGGTGCATGTAAGCTTTaGTCTTTCTCTTCAATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VSWTTFSAGGRHPLWSPKGACKL*SFSSIP Trigger: TGGGATTGAAGAGAAAGACAAAAGCTTACATGCACC...TTTTGGGGACCACAGAGGATGTCTCCCTCCAGCTGAAAAGGTGGTCCAGGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR TCA 72 bp | AGGCATCCTGTCAGATACAACCAGGCAAACAAGGATTaGAAAGGAATCCAGAAGCCCCTGCTCCTTCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: RHPVRYNQANKD*KGIQKPLLLPH Trigger: GTGTGGAAGGAGCAGGGGCTTCTGGATTCCTTTTCAATCCTTGTTTGCCTGGTTGTATCTGACAGGATGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR TCA 72 bp | GTGCGGGAGGGAAGTTTCAGAGCTCTGATAGCCATCTaGGGTGGCCGTGACATTAACTGTAGTTTTACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VREGSFRALIAI*GGRDINCSFTE Trigger: CTCTGTAAAACTACAGTTAATGTCACGGCCACCTCAGATGGCTATCAGAGCTCTGAAACTTCCCTCCCGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CCA 72 bp | GCTGCAAACCGGCCTCCACCAACGGCTTTTCCGAGATaGTTCTTTTGTATCAGAAGGGAGACATTCTGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: AANRPPPTAFPR*FFCIRRETFCS Trigger: ACTACAGAATGTCTCCCTTCTGATACAAAAGAACCATCTCGGAAAAGCCGTTGGTGGAGGCCGGTTTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CCA 72 bp | ACCATGGAGAGCTGGCTCCTGCTTGCTTCAGGAGAGTaGGTGGTGCATGTAAGCTTTTGTCTTTCTCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TMESWLLLASGE*VVHVSFCLSLQ Trigger: TTGAAGAGAAAGACAAAAGCTTACATGCACCACCCACTCTCCTGAAGCAAGCAGGAGCCAGCTCTCCATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CCA 72 bp | GGTGGGAGGGTTGAGAGTTACGCAATCACCTCCTGGTaGGTCAGAAGTGAAAGAAGCAGATATTGGCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GGRVESYAITSW*VRSERSRYWQR Trigger: TCTTTGCCAATATCTGCTTCTTTCACTTCTGACCCACCAGGAGGTGATTGCGTAACTCTCAACCCTCCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCAAGATGCATAGGATCGAACCATGCACCCTTGCAAGCAAGACGAAGGGCAAAGGACCGCTACTTCTaGTCCTCAGCCACCTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FSRCIGSNHAPLQARRRAKDRYF*SSATFL Trigger: AAGAAAGGTGGCTGAGGACAAGAAGTAGCGGTCCTT...TGCCCTTCGTCTTGCTTGCAAGGGTGCATGGTTCGATCCTATGCATCTTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CCA 72 bp | CAGTTGCTGCTTTATAGGTGTGGAGCGAGAGTTCTATaGGTCCCTCCAAGCTTTAGATATCTCCCACTACCA | + |
|
Preference number: 3 (lower is better) Translates to: QLLLYRCGARVL*VPPSFRYLPLP Trigger: TGGTAGTGGGAGATATCTAAAGCTTGGAGGGACCCATAGAACTCTCGCTCCACACCTATAAAGCAGCAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR TCA 72 bp | TTGCTGTGTCTCTGGTTTCTAACAGGTAAGGGGTCTTaGGAGGAAGCTGGTTTCTCTGGCCTAGGATTTATT | + |
|
Preference number: 3 (lower is better) Translates to: LLCLWFLTGKGS*EEAGFSGLGFI Trigger: AATAAATCCTAGGCCAGAGAAACCAGCTTCCTCTCAAGACCCCTTACCTGTTAGAAACCAGAGACACAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCTCAAAAGAAGGTTAAAGGCAATGAAGGTGAATCGACGTGCAAATTAGCAAAGGCAGTGAAGCAGTaGCTGCTTTATAGGTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CPQKKVKGNEGESTCKLAKAVKQ*LLYRCG Trigger: TCCACACCTATAAAGCAGCAACTGCTTCACTGCCTT...TGCTAATTTGCACGTCGATTCACCTTCATTGCCTTTAACCTTCTTTTGAGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR TCA 72 bp | AAGGGCATTGCAGTGAATGGTCTCAATCTCAACCTTTaGTATTTCCGACTAGGACGTTCTTTGGGTAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KGIAVNGLNLNL*YFRLGRSLGRK Trigger: CTTCCTACCCAAAGAACGTCCTAGTCGGAAATATCAAAGGTTGAGATTGAGACCATTCACTGCAATGCCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR TCA 72 bp | AGCACATGCCAGAAGTCAACCTATCAGGCAGCAAACTaGACACTTGGGGGAAAGAAATTGATGTTTCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: STCQKSTYQAAN*TLGGKKLMFHL Trigger: CAAGTGAAACATCAATTTCTTTCCCCCAAGTGTTCAGTTTGCTGCCTGATAGGTTGACTTCTGGCATGTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR TCA 72 bp | GCTTTGAGGGGACCATGCTGGTCACTTTGTTGTATATaGCTGCTCTGTGTTTTGCTGAAAGCAATTAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ALRGPCWSLCCI*LLCVLLKAIRR Trigger: CCTTCTAATTGCTTTCAGCAAAACACAGAGCAGTCATATACAACAAAGTGACCAGCATGGTCCCCTCAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR TCA 72 bp | AACAGAGTAGTGGGGGAAGAGGTGGGAAGATCTATCTaGGGAATTAAAATGGATAGTTTGTTGTTCCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: NRVVGEEVGRSI*GIKMDSLLFPV Trigger: CACAGGGAACAACAAACTATCCATTTTAATTCCTCAGATAGATCTTCCCACCTCTTCCCCCACTACTCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR TCA 72 bp | TTCCCTTTAAGGACTGATCTTTCCTTTTGGCACTTCTaGGATTTAGGAAGGACTTACTTCAAAGCCTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: FPLRTDLSFWHF*DLGRTYFKAWG Trigger: ACCCCAGGCTTTGAAGTAAGTCCTTCCTAAATCTCAGAAGTGCCAAAAGGAAAGATCAGTCCTTAAAGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR TCA 72 bp | TGTTACCCACTCTGCTTACAGGTTCCCTTTAAGGACTaGTCTTTCCTTTTGGCACTTCTGAGATTTAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: CYPLCLQVPFKD*SFLLALLRFRK Trigger: CTTCCTAAATCTCAGAAGTGCCAAAAGGAAAGATCAGTCCTTAAAGGGAACCTGTAAGCAGAGTGGGTAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR TCA 72 bp | CACACACTTTATAGTAACAAACATGCTAGGGAGCTTTaGGGGGACCATGCTGGTCACTTTGTTGTATATGAC | + |
|
Preference number: 3 (lower is better) Translates to: HTLYSNKHAREL*GDHAGHFVVYD Trigger: GTCATATACAACAAAGTGACCAGCATGGTCCCCTCAAAGCTCCCTAGCATGTTTGTTACTATAAAGTGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CCA 72 bp | ACCTCCTGGTGGGTCAGAAGTGAAAGAAGCAGATATTaGCAAAGAAGAACGATCGCTTCTCAAAATTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: TSWWVRSERSRY*QRRTIASQNLL Trigger: CAACAAATTTTGAGAAGCGATCGTTCTTCTTTGCCAATATCTGCTTCTTTCACTTCTGACCCACCAGGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR GCA 72 bp | TGTTGGGTGTTTCATATTCAGGGATATCTTAATGTCTaGAAACCCATTCCTTGTTACCCACTCTGCTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: CWVFHIQGYLNV*KPIPCYPLCLQ Trigger: CTGTAAGCAGAGTGGGTAACAAGGAATGGGTTTGCAGACATTAAGATATCCCTGAATATGAAACACCCAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCTCAAAAGAAGGTTAAAGGCAATGAAGGTGAATCGACGTGCAAATTAGCAGTCAATATTCACTTATaGAAAGGAAGAATGAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CPQKKVKGNEGESTCKLAVNIHL*KGRMRE Trigger: CTCCCTCATTCTTCCTTTCAATAAGTGAATATTGAC...TGCTAATTTGCACGTCGATTCACCTTCATTGCCTTTAACCTTCTTTTGAGGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR TCA 72 bp | AGAACGATCGCTTCTCAAAATTTGTTGTACAGGATTTaGGACTGCACACCTGGAGGTCAATATTCACTTATT | + |
|
Preference number: 3 (lower is better) Translates to: RTIASQNLLYRI*DCTPGGQYSLI Trigger: AATAAGTGAATATTGACCTCCAGGTGTGCAGTCTCAAATCCTGTACAACAAATTTTGAGAAGCGATCGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR TCA 72 bp | ACAATTTCTTTAAGAACAAGTCAGAGCTACTTAATGTaGCCAATAAGAACAAACCCAGTGGCCTGGGTAATA | + |
|
Preference number: 3 (lower is better) Translates to: TISLRTSQSYLM*PIRTNPVAWVI Trigger: TATTACCCAGGCCACTGGGTTTGTTCTTATTGGTCACATTAAGTAGCTCTGACTTGTTCTTAAAGAAATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR GCA 90 bp | AGCCTGCTGTGCCACCTTGCCCTTGCCCGCTGCTCTCCTCCTGGGCACGGCCTCCTGAGATGTCAGGGATaGGGCAGTGGTGCGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLCHLALARCSPPGHGLLRCQG*GSGAEN Trigger: GTTCTCCGCACCACTGCCGCATCCCTGACATCTCAG...GAGGCCGTGCCCAGGAGGAGAGCAGCGGGCAAGGGCAAGGTGGCACAGCAGGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR GCA 90 bp | AGCCTGCTGTGCCACCTTGCCCTTGCCCGCTGCTCTCCTCCTGGGCACGGCCTCCCTGATCTTCAGGTATaGTGCACCTCCAAACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLCHLALARCSPPGHGLPDLQV*CTSKHQ Trigger: CTGGTGTTTGGAGGTGCAGCATACCTGAAGATCAGG...GAGGCCGTGCCCAGGAGGAGAGCAGCGGGCAAGGGCAAGGTGGCACAGCAGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CAA 72 bp | CCCTGTCTGCTCTTCAAGCTCACCTCCCAGCTTTGCTaGTGGGTTGGGAATTCCTGTTGCCTTTGGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PCLLFKLTSQLC*WVGNSCCLWVA Trigger: GGCCACCCAAAGGCAACAGGAATTCCCAACCCACAAGCAAAGCTGGGAGGTGAGCTTGAAGAGCAGACAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR TCA 90 bp | TTCTCTTCAATCCCATCCCTTAGACTCCGCATGTCTCTCCCTGTCTGCTCTTCAGGGGAACCCGGCAGGTaGGGAGTCTGTGCTGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FSSIPSLRLRMSLPVCSSGEPGR*GVCAVD Trigger: GTCAACAGCACAGACTCCTCACCTGCCGGGTTCCCC...TGAAGAGCAGACAGGGAGAGACATGCGGAGTCTAAGGGATGGGATTGAAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR TCA 90 bp | TGCTCTTCAAGCTCACCTCCCAGCTTTGCTTGTGGGTTGGGAATTCCTGTTGCCGCACTGGCTCTGCTGTaGCATGGGAAGTGGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSSSSPPSFACGLGIPVAALALL*HGKWVC Trigger: ACACACCCACTTCCCATGTCACAGCAGAGCCAGTGC...GGCAACAGGAATTCCCAACCCACAAGCAAAGCTGGGAGGTGAGCTTGAAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR CCA 90 bp | TGCTCTTCAAGCTCACCTCCCAGCTTTGCTTGTGGGTTGGGAATTCCTGTTGCCGGAGCTTCTGTGGGCTaGATGTTGGCCACCGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSSSSPPSFACGLGIPVAGASVG*MLATVE Trigger: CTCTACGGTGGCCAACATCCAGCCCACAGAAGCTCC...GGCAACAGGAATTCCCAACCCACAAGCAAAGCTGGGAGGTGAGCTTGAAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CAA 72 bp | CCAGCTTTGCTTGTGGGTTGGGAATTCCTGTTGCCTTaGGGTGGCCTAGATGGGGAAAGCAGGTTGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PALLVGWEFLLP*GGLDGESRLRA Trigger: GGCTCTCAACCTGCTTTCCCCATCTAGGCCACCCAAAGGCAACAGGAATTCCCAACCCACAAGCAAAGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CAA 72 bp | CACCTCCCAGCTTTGCTTGTGGGTTGGGAATTCCTGTaGCCTTTGGGTGGCCTAGATGGGGAAAGCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HLPALLVGWEFL*PLGGLDGESRL Trigger: CAACCTGCTTTCCCCATCTAGGCCACCCAAAGGCAACAGGAATTCCCAACCCACAAGCAAAGCTGGGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CAA 72 bp | TGCTCTTCAAGCTCACCTCCCAGCTTTGCTTGTGGGTaGGGAATTCCTGTTGCCTTTGGGTGGCCTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: CSSSSPPSFACG*GIPVAFGWPRW Trigger: CCATCTAGGCCACCCAAAGGCAACAGGAATTCCCAACCCACAAGCAAAGCTGGGAGGTGAGCTTGAAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CAA 72 bp | CTCTCCCTGTCTGCTCTTCAAGCTCACCTCCCAGCTTaGCTTGTGGGTTGGGAATTCCTGTTGCCTTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSALQAHLPA*LVGWEFLLPLG Trigger: ACCCAAAGGCAACAGGAATTCCCAACCCACAAGCAAAGCTGGGAGGTGAGCTTGAAGAGCAGACAGGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR TCA 90 bp | AGGTCAAGTGTGGTCAGAGGGCACACCCTTGCAAGGTGTGTCTGTCTGTCTGTCAGGAGTCTGTGCTGTTaGCATCCCTCTTCAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSSVVRGHTLARCVCLSVRSLCC*HPSSKV Trigger: CACCTTTGAAGAGGGATGTCAACAGCACAGACTCCT...GACAGACAGACAGACACACCTTGCAAGGGTGTGCCCTCTGACCACACTTGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR TCA 90 bp | GGGTTGAGAGTTACGCAATCACCTCCTGGTGGGTCAGAAGTGAAAGAAGCAGATGCTGAGGTTGGAGCCTaGGAAGACAGGAGCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLRVTQSPPGGSEVKEADAEVGA*EDRSMG Trigger: ACCCATGCTCCTGTCTTCTCAGGCTCCAACCTCAGC...ATCTGCTTCTTTCACTTCTGACCCACCAGGAGGTGATTGCGTAACTCTCAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR GCA 90 bp | GGGTTGAGAGTTACGCAATCACCTCCTGGTGGGTCAGAAGTGAAAGAAGCAGATCTGTACCCTCAGTCCTaGGGTGAAGATGCAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLRVTQSPPGGSEVKEADLYPQS*GEDAEG Trigger: GCCCTCTGCATCTTCACCGCAGGACTGAGGGTACAG...ATCTGCTTCTTTCACTTCTGACCCACCAGGAGGTGATTGCGTAACTCTCAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR TCA 90 bp | TTTTCAAGATGCATAGGATCGAACCATGCACCCTTGCAAGCAAGACGAAGGGCAGGGGGATGTGGTTGCTaGGGTTGGAGCCTGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSRCIGSNHAPLQARRRAGGCGC*GWSLRR Trigger: TCTTCTCAGGCTCCAACCTCAGCAACCACATCCCCC...TGCCCTTCGTCTTGCTTGCAAGGGTGCATGGTTCGATCCTATGCATCTTGAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR GCA 90 bp | TTTTCAAGATGCATAGGATCGAACCATGCACCCTTGCAAGCAAGACGAAGGGCACCAAGTGGCCATCACTaGTTGTTGAGGGGAACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FSRCIGSNHAPLQARRRAPSGHH*LLRGTR Trigger: CCGGGTTCCCCTCAACAAGCAGTGATGGCCACTTGG...TGCCCTTCGTCTTGCTTGCAAGGGTGCATGGTTCGATCCTATGCATCTTGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR TCA 90 bp | AAGAACAAACCCAGTGGCCTGGGTAATAGACCATCTCAAAATGTGAATCACCACTGGTCAGTGGGGAGCTaGGATGTCAGGGATGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KNKPSGLGNRPSQNVNHHWSVGS*DVRDAA Trigger: TGCCGCATCCCTGACATCTCAGCTCCCCACTGACCA...GTGGTGATTCACATTTTGAGATGGTCTATTACCCAGGCCACTGGGTTTGTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR TCA 90 bp | TTCTCTTCAATCCCATCCCTTAGACTCCGCATGTCTCTCCCTGTCTGCTCTTCATCAAAGGTGGGCTGGTaGCAGCTTCTTCTCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSSIPSLRLRMSLPVCSSSKVGW*QLLLCG Trigger: ACCACAGAGAAGAAGCTGTCACCAGCCCACCTTTGA...TGAAGAGCAGACAGGGAGAGACATGCGGAGTCTAAGGGATGGGATTGAAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR CCA 90 bp | AAAACAGCTAACTCAACATCAGTCAGGTGTGCGGGAGGGAAGTTTCAGAGCTCTAAGTTGCGGGGGATGTaGTTGCTGAGGTTGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTANSTSVRCAGGKFQSSKLRGM*LLRLEP Trigger: AGGCTCCAACCTCAGCAACCACATCCCCCGCAACTT...AGAGCTCTGAAACTTCCCTCCCGCACACCTGACTGATGTTGAGTTAGCTGTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR TCA 90 bp | GGGTTGAGAGTTACGCAATCACCTCCTGGTGGGTCAGAAGTGAAAGAAGCAGATGGTGGCCACAGGTGCTaGACTTTTTGTCATGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLRVTQSPPGGSEVKEADGGHRC*TFCHER Trigger: TCTCTCATGACAAAAAGTTCAGCACCTGTGGCCACC...ATCTGCTTCTTTCACTTCTGACCCACCAGGAGGTGATTGCGTAACTCTCAACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR GCA 90 bp | GAGACTGCACACCTGGAGGTCAATATTCACTTATTGAAAGGAAGAATGAGGGAGCTTGGGCACTGGCTCTaGTGTGACATGGGAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ETAHLEVNIHLLKGRMRELGHWL*CDMGSG Trigger: CCCACTTCCCATGTCACAGCAGAGCCAGTGCCCAAG...CTCCCTCATTCTTCCTTTCAATAAGTGAATATTGACCTCCAGGTGTGCAGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR CCA 90 bp | GAGACTGCACACCTGGAGGTCAATATTCACTTATTGAAAGGAAGAATGAGGGAGCCATTGGAGCTTCTGTaGGCTGGATGTTGGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: ETAHLEVNIHLLKGRMREPLELL*AGCWPP Trigger: CGGTGGCCAACATCCAGCCCACAGAAGCTCCAATGG...CTCCCTCATTCTTCCTTTCAATAAGTGAATATTGACCTCCAGGTGTGCAGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CAA 72 bp | GCTTGCTTCAGGAGAGTGGGTGGTGCATGTAAGCTTTaGTCTTTCTCTTCAATCCCATCCCTTAGACTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ACFRRVGGACKL*SFSSIPSLRLR Trigger: GCGGAGTCTAAGGGATGGGATTGAAGAGAAAGACAAAAGCTTACATGCACCACCCACTCTCCTGAAGCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR TCA 90 bp | GGGGCCCATCAGGGCCATGGGAAAAGAAAGCATAGTTGCCTACCATTCTTTGACCTGAACTTTTTGTCATaGGAGAGACAGGCAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GAHQGHGKRKHSCLPFFDLNFLS*ERQAMG Trigger: TCCCATTGCCTGTCTCTCTCATGACAAAAAGTTCAG...GTCAAAGAATGGTAGGCAACTATGCTTTCTTTTCCCATGGCCCTGATGGGCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR GCA 90 bp | GGCAAACAAGGATTGAAAAGGAATCCAGAAGCCCCTGCTCCTTCCACACAGAGTACTCACAGATCACTTTaGCAGGTTCAGTGTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GKQGLKRNPEAPAPSTQSTHRSL*QVQCLG Trigger: CCCAAGACACTGAACCTGGCAAAGTGATCTGTGAGT...ACTCTGTGTGGAAGGAGCAGGGGCTTCTGGATTCCTTTTCAATCCTTGTTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR GCA 90 bp | AAAACAGCTAACTCAACATCAGTCAGGTGTGCGGGAGGGAAGTTTCAGAGCTCTGCATTCTCCACTTCTTaGATGATCAGGAAGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KTANSTSVRCAGGKFQSSAFSTS*MIRKGV Trigger: CACCCCCTTCCTGATCATGCAAGAAGTGGAGAATGC...AGAGCTCTGAAACTTCCCTCCCGCACACCTGACTGATGTTGAGTTAGCTGTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR CCA 90 bp | AAAACAGCTAACTCAACATCAGTCAGGTGTGCGGGAGGGAAGTTTCAGAGCTCTATCCCTCTTCAAAGGTaGGCTGGTGACAGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTANSTSVRCAGGKFQSSIPLQR*AGDSFF Trigger: GAAGAAGCTGTCACCAGCCCACCTTTGAAGAGGGAT...AGAGCTCTGAAACTTCCCTCCCGCACACCTGACTGATGTTGAGTTAGCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CAA 72 bp | TTAGGAAGGACTTACTTCAAAGCCTGGGGTGGTAGGTaGTGGGAAGTACCCCTGTTTGTGGACTTTACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LGRTYFKAWGGR*WEVPLFVDFTP Trigger: TGGTGTAAAGTCCACAAACAGGGGTACTTCCCACAACCTACCACCCCAGGCTTTGAAGTAAGTCCTTCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR TCA 90 bp | GAGACTGCACACCTGGAGGTCAATATTCACTTATTGAAAGGAAGAATGAGGGAGCATAGGAGGAGTGCCTaGTCTTCAGGTATGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ETAHLEVNIHLLKGRMREHRRSA*SSGMLH Trigger: GTGCAGCATACCTGAAGATCAGGCACTCCTCCTATG...CTCCCTCATTCTTCCTTTCAATAAGTGAATATTGACCTCCAGGTGTGCAGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR CCA 90 bp | ATTGGCAAAGAAGAACGATCGCTTCTCAAAATTTGTTGTACAGGATTTGAGACTCGTTGTGAGTGGCACTaGCTACAGGGGTGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IGKEERSLLKICCTGFETRCEWH*LQGWWP Trigger: GGGCCACCACCCCTGTAGCCAGTGCCACTCACAACG...AGTCTCAAATCCTGTACAACAAATTTTGAGAAGCGATCGTTCTTCTTTGCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CAA 72 bp | ATGCTAGGGAGCTTTGAGGGGACCATGCTGGTCACTTaGTTGTATATGACTGCTCTGTGTTTTGCTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: MLGSFEGTMLVT*LYMTALCFAES Trigger: GCTTTCAGCAAAACACAGAGCAGTCATATACAACAAAGTGACCAGCATGGTCCCCTCAAAGCTCCCTAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CAA 72 bp | GCCATGGGAAAAGAAAGCATAGTTGCCTACCATTCTTaGACCATTTGCAGTCCATGGAGAAGAGGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AMGKESIVAYHS*TICSPWRRGSS Trigger: ACTGGAGCCTCTTCTCCATGGACTGCAAATGGTCAAAGAATGGTAGGCAACTATGCTTTCTTTTCCCATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR TCA 90 bp | ATTGGCAAAGAAGAACGATCGCTTCTCAAAATTTGTTGTACAGGATTTGAGACTAGAACTGAGGCGTTGTaGGTGGCACTGGCTACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IGKEERSLLKICCTGFETRTEAL*VALATG Trigger: CCCTGTAGCCAGTGCCACTCACAACGCCTCAGTTCT...AGTCTCAAATCCTGTACAACAAATTTTGAGAAGCGATCGTTCTTCTTTGCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CAA 72 bp | CTAGGGAGCTTTGAGGGGACCATGCTGGTCACTTTGTaGTATATGACTGCTCTGTGTTTTGCTGAAAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGSFEGTMLVTL*YMTALCFAESN Trigger: ATTGCTTTCAGCAAAACACAGAGCAGTCATATACAACAAAGTGACCAGCATGGTCCCCTCAAAGCTCCCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CAA 72 bp | TCATTTTCAAGATGCATAGGATCGAACCATGCACCCTaGCAAGCAAGACGAAGGGCAGATGACATCAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SFSRCIGSNHAP*QARRRADDIRS Trigger: TGATCTGATGTCATCTGCCCTTCGTCTTGCTTGCAAGGGTGCATGGTTCGATCCTATGCATCTTGAAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR CCA 90 bp | TTGGCAAAGAAGAACGATCGCTTCTCAAAATTTGTTGTACAGGATTTGAGACTGTTTCTCCTTGGGCACTaGCTCTGCTGTGACATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LAKKNDRFSKFVVQDLRLFLLGH*LCCDMG Trigger: TCCCATGTCACAGCAGAGCCAGTGCCCAAGGAGAAA...CAGTCTCAAATCCTGTACAACAAATTTTGAGAAGCGATCGTTCTTCTTTGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS-3UTR CCA 90 bp | ATTGGCAAAGAAGAACGATCGCTTCTCAAAATTTGTTGTACAGGATTTGAGACTTCAGGAAGGGGGTGGTaGTCTCAGACTCACAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: IGKEERSLLKICCTGFETSGRGW*SQTHRS Trigger: TGATCTGTGAGTCTGAGACCACCACCCCCTTCCTGA...AGTCTCAAATCCTGTACAACAAATTTTGAGAAGCGATCGTTCTTCTTTGCCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CAA 72 bp | AAAAGAAAGCATAGTTGCCTACCATTCTTTGACCATTaGCAGTCCATGGAGAAGAGGCTCCAGTTCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRKHSCLPFFDH*QSMEKRLQFSF Trigger: AAAAGAGAACTGGAGCCTCTTCTCCATGGACTGCAAATGGTCAAAGAATGGTAGGCAACTATGCTTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| 3UTR CAA 72 bp | AAGAACGATCGCTTCTCAAAATTTGTTGTACAGGATTaGAGACTGCACACCTGGAGGTCAATATTCACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KNDRFSKFVVQD*RLHTWRSIFTY Trigger: ATAAGTGAATATTGACCTCCAGGTGTGCAGTCTCAAATCCTGTACAACAAATTTTGAGAAGCGATCGTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS TCA 90 bp | TCCGATAGGGAAGTTGCGGGGGATGTGGTTGCTGAGGTTGGAGCCTaGGAAGACAGGAGCATGGGTGACTGTGACCCAGTAGCTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SDREVAGDVVAEVGA*EDRSMGDCDPVAGT Trigger: TGTGCCAGCTACTGGGTCACAGTCACCCATGCTCCTGTCTTCTCAGGCTCCAACCTCAGCAACCACATCCCCCGCAACTTCCCTATCGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS CCA 90 bp | GCTTCAGGACTTCCAAGACTGTGTTCCTCAGGTGTGGGTGCCAAGTaGCCATCACTGCTTGTTGAGGGGAACCCGGCAGGTGAGGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASGLPRLCSSGVGAK*PSLLVEGNPAGEES Trigger: AGACTCCTCACCTGCCGGGTTCCCCTCAACAAGCAGTGATGGCCACTTGGCACCCACACCTGAGGAACACAGTCTTGGAAGTCCTGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
||
| CDS CCA 90 bp | CTGGCACAGTTGCTTCAGGACTTCCAAGACTGTGTTCCTCAGGTGTaGGTGCCAAGTGGCCATCACTGCTTGTTGAGGGGAACCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LAQLLQDFQDCVPQV*VPSGHHCLLRGTRQ Trigger: CTGCCGGGTTCCCCTCAACAAGCAGTGATGGCCACTTGGCACCCACACCTGAGGAACACAGTCTTGGAAGTCCTGAAGCAACTGTGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS TCA 90 bp | GACATGGGAAGTGGGTGTGTGACTAGAGCTGTGCTCTTCTGTTGGTaGCGCAGGTGCCATTGGAGCTTCTGTGGGCTGGATGTTGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: DMGSGCVTRAVLFCW*RRCHWSFCGLDVGH Trigger: GTGGCCAACATCCAGCCCACAGAAGCTCCAATGGCACCTGCGTCACCAACAGAAGAGCACAGCTCTAGTCACACACCCACTTCCCATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CCA 90 bp | TGCTCTTCTGTTGGTGACGCAGGTGCCATTGGAGCTTCTGTGGGCTaGATGTTGGCCACCGTAGAGTTGTGGCTAGAGGTAACGGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: CSSVGDAGAIGASVG*MLATVELWLEVTEA Trigger: TGCCTCCGTTACCTCTAGCCACAACTCTACGGTGGCCAACATCCAGCCCACAGAAGCTCCAATGGCACCTGCGTCACCAACAGAAGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS-3UTR CAA 90 bp | TGCTCTTCAAGCTCACCTCCCAGCTTTGCTTGTGGGTTGGGAATTCCTGTTGCCTTGCGGGGGATGTGGTaGCTGAGGTTGGAGCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: CSSSSPPSFACGLGIPVALRGMW*LRLEPE Trigger: CTCAGGCTCCAACCTCAGCAACCACATCCCCCGCAA...GGCAACAGGAATTCCCAACCCACAAGCAAAGCTGGGAGGTGAGCTTGAAGAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS TCA 90 bp | TTCTCCTTGGGCACTGGCTCTGCTGTGACATGGGAAGTGGGTGTGTaGCTAGAGCTGTGCTCTTCTGTTGGTGACGCAGGTGCCATTGGA | + |
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Preference number: 5 (lower is better) Translates to: FSLGTGSAVTWEVGV*LELCSSVGDAGAIG Trigger: TCCAATGGCACCTGCGTCACCAACAGAAGAGCACAGCTCTAGTCACACACCCACTTCCCATGTCACAGCAGAGCCAGTGCCCAAGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS TCA 90 bp | GGTCTCAGACTCACAGATCACTTTGCCAGGTTCAGTGTCTTGGGGTaGTTTCTCCTTGGGCACTGGCTCTGCTGTGACATGGGAAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: GLRLTDHFARFSVLG*FLLGHWLCCDMGSG Trigger: CCCACTTCCCATGTCACAGCAGAGCCAGTGCCCAAGGAGAAATCACCCCAAGACACTGAACCTGGCAAAGTGATCTGTGAGTCTGAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS TCA 90 bp | TGGCGGCGATGCTGCCTGAACTTAAGGCATTCTCCACTTCTTGCATaGTCAGGAAGGGGGTGGTGGTCTCAGACTCACAGATCACTTTGC | + |
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Preference number: 5 (lower is better) Translates to: WRRCCLNLRHSPLLA*SGRGWWSQTHRSLC Trigger: GCAAAGTGATCTGTGAGTCTGAGACCACCACCCCCTTCCTGATCATGCAAGAAGTGGAGAATGCCTTAAGTTCAGGCAGCATCGCCGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS GCA 90 bp | GTGATGGCGGCGATGCTGCCTGAACTTAAGGCATTCTCCACTTCTTaGATGATCAGGAAGGGGGTGGTGGTCTCAGACTCACAGATCACT | + |
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Preference number: 5 (lower is better) Translates to: VMAAMLPELKAFSTS*MIRKGVVVSDSQIT Trigger: AGTGATCTGTGAGTCTGAGACCACCACCCCCTTCCTGATCATGCAAGAAGTGGAGAATGCCTTAAGTTCAGGCAGCATCGCCGCCATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS-3UTR CAA 90 bp | AAAACAGCTAACTCAACATCAGTCAGGTGTGCGGGAGGGAAGTTTCAGAGCTCTACTCCGATAGGGAAGTaGCGGGGGATGTGGTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: KTANSTSVRCAGGKFQSSTPIGK*RGMWLL Trigger: CAGCAACCACATCCCCCGCAACTTCCCTATCGGAGT...AGAGCTCTGAAACTTCCCTCCCGCACACCTGACTGATGTTGAGTTAGCTGTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS-3UTR CAA 90 bp | TTCTCTTCAATCCCATCCCTTAGACTCCGCATGTCTCTCCCTGTCTGCTCTTCAAGCTGTGCTCTTCTGTaGGTGACGCAGGTGCCATTG | + |
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Preference number: 5 (lower is better) Translates to: FSSIPSLRLRMSLPVCSSSCALL*VTQVPL Trigger: CAATGGCACCTGCGTCACCAACAGAAGAGCACAGCT...TGAAGAGCAGACAGGGAGAGACATGCGGAGTCTAAGGGATGGGATTGAAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS-3UTR CAA 90 bp | AAAACAGCTAACTCAACATCAGTCAGGTGTGCGGGAGGGAAGTTTCAGAGCTCTTGGGGTGATTTCTCCTaGGGCACTGGCTCTGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: KTANSTSVRCAGGKFQSSWGDFS*GTGSAV Trigger: CACAGCAGAGCCAGTGCCCAAGGAGAAATCACCCCA...AGAGCTCTGAAACTTCCCTCCCGCACACCTGACTGATGTTGAGTTAGCTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS-3UTR CAA 90 bp | AAGAACAAACCCAGTGGCCTGGGTAATAGACCATCTCAAAATGTGAATCACCACATGTGGTTGCTGAGGTaGGAGCCTGAGAAGACAGGA | + |
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Preference number: 5 (lower is better) Translates to: KNKPSGLGNRPSQNVNHHMWLLR*EPEKTG Trigger: TCCTGTCTTCTCAGGCTCCAACCTCAGCAACCACAT...GTGGTGATTCACATTTTGAGATGGTCTATTACCCAGGCCACTGGGTTTGTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS TCA 72 bp | AGGGATGCGGCAGTGGTGCGGAGAACTGAGGCGTTGTaGGTGGCACTGGCTACAGGGGTGGTGGCCCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: RDAAVVRRTEAL*VALATGVVALA Trigger: TGCTAGGGCCACCACCCCTGTAGCCAGTGCCACTCACAACGCCTCAGTTCTCCGCACCACTGCCGCATCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CCA 72 bp | GGTCAGTGGGGAGCTGAGATGTCAGGGATGCGGCAGTaGTGCGGAGAACTGAGGCGTTGTGAGTGGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: GQWGAEMSGMRQ*CGELRRCEWHW Trigger: CCAGTGCCACTCACAACGCCTCAGTTCTCCGCACCACTGCCGCATCCCTGACATCTCAGCTCCCCACTGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS GCA 72 bp | CAGTGGGGAGCTGAGATGTCAGGGATGCGGCAGTGGTaGGGAGAACTGAGGCGTTGTGAGTGGCACTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: QWGAEMSGMRQW*GELRRCEWHWL Trigger: TAGCCAGTGCCACTCACAACGCCTCAGTTCTCCGCACCACTGCCGCATCCCTGACATCTCAGCTCCCCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CAA 72 bp | CCTCAGGTGTGGGTGCCAAGTGGCCATCACTGCTTGTaGAGGGGAACCCGGCAGGTGAGGAGTCTGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PQVWVPSGHHCL*RGTRQVRSLCC Trigger: ACAGCACAGACTCCTCACCTGCCGGGTTCCCCTCAACAAGCAGTGATGGCCACTTGGCACCCACACCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CAA 72 bp | GTTCCTCAGGTGTGGGTGCCAAGTGGCCATCACTGCTaGTTGAGGGGAACCCGGCAGGTGAGGAGTCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: VPQVWVPSGHHC*LRGTRQVRSLC Trigger: GCACAGACTCCTCACCTGCCGGGTTCCCCTCAACAAGCAGTGATGGCCACTTGGCACCCACACCTGAGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS GCA 72 bp | TGTGTTCCTCAGGTGTGGGTGCCAAGTGGCCATCACTaGTTGTTGAGGGGAACCCGGCAGGTGAGGAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: CVPQVWVPSGHH*LLRGTRQVRSL Trigger: CAGACTCCTCACCTGCCGGGTTCCCCTCAACAAGCAGTGATGGCCACTTGGCACCCACACCTGAGGAACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CCA 72 bp | CTTCCAAGACTGTGTTCCTCAGGTGTGGGTGCCAAGTaGCCATCACTGCTTGTTGAGGGGAACCCGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LPRLCSSGVGAK*PSLLVEGNPAG Trigger: ACCTGCCGGGTTCCCCTCAACAAGCAGTGATGGCCACTTGGCACCCACACCTGAGGAACACAGTCTTGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CAA 72 bp | GTTGAGGGGAACCCGGCAGGTGAGGAGTCTGTGCTGTaGACATCCCTCTTCAAAGGTGGGCTGGTGACAGCT | + |
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Preference number: 6 (lower is better) Translates to: VEGNPAGEESVL*TSLFKGGLVTA Trigger: AGCTGTCACCAGCCCACCTTTGAAGAGGGATGTCAACAGCACAGACTCCTCACCTGCCGGGTTCCCCTCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CAA 72 bp | CCGATAGGGAAGTTGCGGGGGATGTGGTTGCTGAGGTaGGAGCCTGAGAAGACAGGAGCATGGGTGACTGTG | + |
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Preference number: 6 (lower is better) Translates to: PIGKLRGMWLLR*EPEKTGAWVTV Trigger: CACAGTCACCCATGCTCCTGTCTTCTCAGGCTCCAACCTCAGCAACCACATCCCCCGCAACTTCCCTATCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CAA 90 bp | GGTGCCATTGGAGCTTCTGTGGGCTGGATGTTGGCCACCGTAGAGTaGTGGCTAGAGGTAACGGAGGCAGAGAGAGACTCCGATAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: GAIGASVGWMLATVE*WLEVTEAERDSDRE Trigger: TTCCCTATCGGAGTCTCTCTCTGCCTCCGTTACCTCTAGCCACAACTCTACGGTGGCCAACATCCAGCCCACAGAAGCTCCAATGGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CAA 90 bp | TCTGTTGGTGACGCAGGTGCCATTGGAGCTTCTGTGGGCTGGATGTaGGCCACCGTAGAGTTGTGGCTAGAGGTAACGGAGGCAGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: SVGDAGAIGASVGWM*ATVELWLEVTEAER Trigger: TCTCTCTGCCTCCGTTACCTCTAGCCACAACTCTACGGTGGCCAACATCCAGCCCACAGAAGCTCCAATGGCACCTGCGTCACCAACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS TCA 72 bp | GAAGTTGCGGGGGATGTGGTTGCTGAGGTTGGAGCCTaGGAAGACAGGAGCATGGGTGACTGTGACCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: EVAGDVVAEVGA*EDRSMGDCDPV Trigger: TACTGGGTCACAGTCACCCATGCTCCTGTCTTCTCAGGCTCCAACCTCAGCAACCACATCCCCCGCAACTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS TCA 72 bp | GGCACTGGCTCTGCTGTGACATGGGAAGTGGGTGTGTaGCTAGAGCTGTGCTCTTCTGTTGGTGACGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GTGSAVTWEVGV*LELCSSVGDAG Trigger: ACCTGCGTCACCAACAGAAGAGCACAGCTCTAGTCACACACCCACTTCCCATGTCACAGCAGAGCCAGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CCA 72 bp | GCTTCTGTGGGCTGGATGTTGGCCACCGTAGAGTTGTaGCTAGAGGTAACGGAGGCAGAGAGAGACTCCGAT | + |
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Preference number: 6 (lower is better) Translates to: ASVGWMLATVEL*LEVTEAERDSD Trigger: ATCGGAGTCTCTCTCTGCCTCCGTTACCTCTAGCCACAACTCTACGGTGGCCAACATCCAGCCCACAGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CCA 72 bp | GTTGGTGACGCAGGTGCCATTGGAGCTTCTGTGGGCTaGATGTTGGCCACCGTAGAGTTGTGGCTAGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: VGDAGAIGASVG*MLATVELWLEV Trigger: TACCTCTAGCCACAACTCTACGGTGGCCAACATCCAGCCCACAGAAGCTCCAATGGCACCTGCGTCACCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CAA 72 bp | AGAGAGACTCCGATAGGGAAGTTGCGGGGGATGTGGTaGCTGAGGTTGGAGCCTGAGAAGACAGGAGCATGG | + |
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Preference number: 6 (lower is better) Translates to: RETPIGKLRGMW*LRLEPEKTGAW Trigger: CCATGCTCCTGTCTTCTCAGGCTCCAACCTCAGCAACCACATCCCCCGCAACTTCCCTATCGGAGTCTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CAA 90 bp | TCACTGCTTGTTGAGGGGAACCCGGCAGGTGAGGAGTCTGTGCTGTaGACATCCCTCTTCAAAGGTGGGCTGGTGACAGCTTCTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SLLVEGNPAGEESVL*TSLFKGGLVTASSL Trigger: CAGAGAAGAAGCTGTCACCAGCCCACCTTTGAAGAGGGATGTCAACAGCACAGACTCCTCACCTGCCGGGTTCCCCTCAACAAGCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS TCA 72 bp | AGTGGGTGTGTGACTAGAGCTGTGCTCTTCTGTTGGTaGCGCAGGTGCCATTGGAGCTTCTGTGGGCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: SGCVTRAVLFCW*RRCHWSFCGLD Trigger: ATCCAGCCCACAGAAGCTCCAATGGCACCTGCGTCACCAACAGAAGAGCACAGCTCTAGTCACACACCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CAA 90 bp | TGCATGATCAGGAAGGGGGTGGTGGTCTCAGACTCACAGATCACTTaGCCAGGTTCAGTGTCTTGGGGTGATTTCTCCTTGGGCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: CMIRKGVVVSDSQIT*PGSVSWGDFSLGTG Trigger: GCCAGTGCCCAAGGAGAAATCACCCCAAGACACTGAACCTGGCAAAGTGATCTGTGAGTCTGAGACCACCACCCCCTTCCTGATCATGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS GCA 72 bp | GGAAGGGGGTGGTGGTCTCAGACTCACAGATCACTTTaGCAGGTTCAGTGTCTTGGGGTGATTTCTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GRGWWSQTHRSL*QVQCLGVISPW Trigger: CCAAGGAGAAATCACCCCAAGACACTGAACCTGGCAAAGTGATCTGTGAGTCTGAGACCACCACCCCCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CCA 72 bp | TTGCTTCAGGACTTCCAAGACTGTGTTCCTCAGGTGTaGGTGCCAAGTGGCCATCACTGCTTGTTGAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: LLQDFQDCVPQV*VPSGHHCLLRG Trigger: TCCCCTCAACAAGCAGTGATGGCCACTTGGCACCCACACCTGAGGAACACAGTCTTGGAAGTCCTGAAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CAA 72 bp | ACTTTGCCAGGTTCAGTGTCTTGGGGTGATTTCTCCTaGGGCACTGGCTCTGCTGTGACATGGGAAGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: TLPGSVSWGDFS*GTGSAVTWEVG Trigger: ACCCACTTCCCATGTCACAGCAGAGCCAGTGCCCAAGGAGAAATCACCCCAAGACACTGAACCTGGCAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS TCA 72 bp | CTCACAGATCACTTTGCCAGGTTCAGTGTCTTGGGGTaGTTTCTCCTTGGGCACTGGCTCTGCTGTGACATG | + |
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Preference number: 6 (lower is better) Translates to: LTDHFARFSVLG*FLLGHWLCCDM Trigger: CATGTCACAGCAGAGCCAGTGCCCAAGGAGAAATCACCCCAAGACACTGAACCTGGCAAAGTGATCTGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS GCA 72 bp | GCGATGCTGCCTGAACTTAAGGCATTCTCCACTTCTTaGATGATCAGGAAGGGGGTGGTGGTCTCAGACTCA | + |
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Preference number: 6 (lower is better) Translates to: AMLPELKAFSTS*MIRKGVVVSDS Trigger: TGAGTCTGAGACCACCACCCCCTTCCTGATCATGCAAGAAGTGGAGAATGCCTTAAGTTCAGGCAGCATCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS CAA 72 bp | AGGAAGGGGGTGGTGGTCTCAGACTCACAGATCACTTaGCCAGGTTCAGTGTCTTGGGGTGATTTCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: RKGVVVSDSQIT*PGSVSWGDFSL Trigger: CAAGGAGAAATCACCCCAAGACACTGAACCTGGCAAAGTGATCTGTGAGTCTGAGACCACCACCCCCTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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| CDS TCA 72 bp | TGCTGCCTGAACTTAAGGCATTCTCCACTTCTTGCATaGTCAGGAAGGGGGTGGTGGTCTCAGACTCACAGA | + |
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Preference number: 6 (lower is better) Translates to: CCLNLRHSPLLA*SGRGWWSQTHR Trigger: TCTGTGAGTCTGAGACCACCACCCCCTTCCTGATCATGCAAGAAGTGGAGAATGCCTTAAGTTCAGGCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040576.10 |
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