Pregenerated sensors for PARK7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028964Ensembl transcript IDs: ENSMUST00000030805.14, ENSMUST00000105673.8, ENSMUST00000105674.8, ENSMUST00000105675.8, ENSMUST00000105676.8, ENSMUST00000128075.8, ENSMUST00000134751.8, ENSMUST00000146184.3
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TCAGAAACATACAGACCCGGGATGAGAGCCCCGTGTGGCGGCTGCTTCACATACCCAGTGGGCTTCCAATaGCTGCTCAAGCGTGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: SETYRPGMRAPCGGCFTYPVGFQ*LLKRGA Trigger: GGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGG...GTATGTGAAGCAGCCGCCACACGGGGCTCTCATCCCGGGTCTGTATGTTTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGATGAGAGCCCCGTGTGGCGGCTGCTTCACATACTACTGCTGAGGTTCCCTCTCTGGACACACCAGTaGGCTTCCAATGCCTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: RDESPVWRLLHILLLRFPLWTHQ*ASNACS Trigger: TGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAG...AGGGAACCTCAGCAGTAGTATGTGAAGCAGCCGCCACACGGGGCTCTCATCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGAAACATACAGACCCGGGATGAGAGCCCCGTGTGGCGGCTGCTTCACATAAGGTTCCCTGGGCTCTaGACACACCAGTGGGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: FRNIQTRDESPVWRLLHIRFPGL*THQWAS Trigger: GGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAACCT...TATGTGAAGCAGCCGCCACACGGGGCTCTCATCCCGGGTCTGTATGTTTCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAACATACAGACCCGGGATGAGAGCCCCGTGTGGCGGCTGCTTCACATACACTGCTGAGGTTCCCTaGGCTCTGGACACACCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SETYRPGMRAPCGGCFTYTAEVP*ALDTPV Trigger: CACTGGTGTGTCCAGAGCCCAGGGAACCTCAGCAGT...GTATGTGAAGCAGCCGCCACACGGGGCTCTCATCCCGGGTCTGTATGTTTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAACATACAGACCCGGGATGAGAGCCCCGTGTGGCGGCTGCTTCACATACCTCTGGACACACCAGTaGGCTTCCAATGCCTGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SETYRPGMRAPCGGCFTYLWTHQ*ASNACS Trigger: TGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAG...GTATGTGAAGCAGCCGCCACACGGGGCTCTCATCCCGGGTCTGTATGTTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGAAACATACAGACCCGGGATGAGAGCCCCGTGTGGCGGCTGCTTCACATAACTGCTGAGGTTCCCTaGGCTCTGGACACACCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: FRNIQTRDESPVWRLLHITAEVP*ALDTPV Trigger: CACTGGTGTGTCCAGAGCCCAGGGAACCTCAGCAGT...TATGTGAAGCAGCCGCCACACGGGGCTCTCATCCCGGGTCTGTATGTTTCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| 3UTR CCA 72 bp | CTACTGCTGAGGTTCCCTGGGCTCTGGACACACCAGTaGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLLRFPGLWTHQ*ASNACSSVGPR Trigger: CCTGGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAACCTCAGCAGTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| 3UTR TCA 72 bp | AGAGCCCCGTGTGGCGGCTGCTTCACATACTACTGCTaGGGTTCCCTGGGCTCTGGACACACCAGTGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RAPCGGCFTYYC*GSLGSGHTSGL Trigger: AAGCCCACTGGTGTGTCCAGAGCCCAGGGAACCTCAGCAGTAGTATGTGAAGCAGCCGCCACACGGGGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| 3UTR CCA 72 bp | CTGCTTCACATACTACTGCTGAGGTTCCCTGGGCTCTaGACACACCAGTGGGCTTCCAATGCCTGCTCAAGC | + |
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Preference number: 3 (lower is better) Translates to: LLHILLLRFPGL*THQWASNACSS Trigger: GCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAACCTCAGCAGTAGTATGTGAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR TCA 90 bp | TGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCAGCCGGCCCGCGGCTGGTaGGGATCAGGCCGTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WALDTPVGFQCLLKRGAQPARGW*GSGRPS Trigger: AGAAGGACGGCCTGATCCTCACCAGCCGCGGGCCGG...CTGGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR TCA 90 bp | CTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCACCGGCCCGCGGCTGGTaGGGATCAGGCCGTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGSGHTSGLPMPAQAWGPPARGW*GSGRPS Trigger: AGAAGGACGGCCTGATCCTCACCAGCCGCGGGCCGG...TGGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR TCA 90 bp | GGTTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGCCGGCCCGCGGCTGGTaGGGATCAGGCCGTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSLGSGHTSGLPMPAQAWPARGW*GSGRPS Trigger: AGAAGGACGGCCTGATCCTCACCAGCCGCGGGCCGG...CCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR TCA 90 bp | AGGTTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGCCGGCCCGCGGCTGGTaGGGATCAGGCCGTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RFPGLWTHQWASNACSSVPARGW*GSGRPS Trigger: AGAAGGACGGCCTGATCCTCACCAGCCGCGGGCCGG...CACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAACCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR TCA 90 bp | CCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCCACAGATGGCAGCTATaGGGCCCTTCCTGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLWTHQWASNACSSVGPHRWQL*GPSCSP Trigger: AGGAGAGCAGGAAGGGCCTCATAGCTGCCATCTGTG...GGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR TCA 90 bp | ACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCAGGGCTTGGGCTCACAGATGGCAGCTATaGGGCCCTTCCTGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: THQWASNACSSVGPRAWAHRWQL*GPSCSP Trigger: AGGAGAGCAGGAAGGGCCTCATAGCTGCCATCTGTG...AGCCCAAGCCCTGGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR TCA 90 bp | TTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCACAGATGGCAGCTATaGGGCCCTTCCTGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FPGLWTHQWASNACSSVGHRWQL*GPSCSP Trigger: AGGAGAGCAGGAAGGGCCTCATAGCTGCCATCTGTG...CCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR GCA 90 bp | CTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCACCCTTCCTGCTCTCCTaGTCCTTGAGGATCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGSGHTSGLPMPAQAWGPPFLLS*SLRISF Trigger: GAAGGAGATCCTCAAGGAGCAGGAGAGCAGGAAGGG...TGGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR GCA 90 bp | CTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCACAGAGCCGTAGGACCTaGACAGATGGCAGCTATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGSGHTSGLPMPAQAWGPQSRRT*TDGSYE Trigger: CTCATAGCTGCCATCTGTGCAGGTCCTACGGCTCTG...TGGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCAGCTTCCCAGCCAAGCCTaGAACAGTGACTTTGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: WALDTPVGFQCLLKRGAQLPSQA*NSDFDP Trigger: GGGATCAAAGTCACTGTTGCAGGCTTGGCTGGGAAG...CTGGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR GCA 90 bp | GCAAGGTTCAGAAACATACAGACCCGGGATGAGAGCCCCGTGTGGCGGCTGCTTACATCACGGCTACACTaGACGGGGTCCTTCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARFRNIQTRDESPVWRLLTSRLH*TGSFPA Trigger: GGCTGGGAAGGACCCCGTGCAGTGTAGCCGTGATGT...AAGCAGCCGCCACACGGGGCTCTCATCCCGGGTCTGTATGTTTCTGAACCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR GCA 90 bp | GTTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGCCCTTCCTGCTCTCCTaGTCCTTGAGGATCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPWALDTPVGFQCLLKRGPFLLS*SLRISF Trigger: GAAGGAGATCCTCAAGGAGCAGGAGAGCAGGAAGGG...CCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CCA 90 bp | CCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCCGAGTGCCTCCACAATaGCTAGTGCAAACTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLWTHQWASNACSSVGPRVPPQ*LVQTQS Trigger: GCTTTGAGTTTGCACTAGCCATTGTGGAGGCACTCG...GGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CCA 90 bp | CTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCAGTGCCTTCACTTGGTTaGCCATGTCTTTCCCCACGA | + |
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Preference number: 4 (lower is better) Translates to: LGSGHTSGLPMPAQAWGPVPSLG*PCLSPR Trigger: TCGTGGGGAAAGACATGGCCAACCAAGTGAAGGCAC...TGGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CCA 90 bp | ACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCAGGGCTTGGGCTGTGCCTTCACTTGGTTaGCCATGTCTTTCCCCACGA | + |
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Preference number: 4 (lower is better) Translates to: THQWASNACSSVGPRAWAVPSLG*PCLSPR Trigger: TCGTGGGGAAAGACATGGCCAACCAAGTGAAGGCAC...AGCCCAAGCCCTGGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR TCA 90 bp | GGTTCAGAAACATACAGACCCGGGATGAGAGCCCCGTGTGGCGGCTGCTTCACACACAGATGGCAGCTATaGGGCCCTTCCTGCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GSETYRPGMRAPCGGCFTHRWQL*GPSCSP Trigger: AGGAGAGCAGGAAGGGCCTCATAGCTGCCATCTGTG...TGTGAAGCAGCCGCCACACGGGGCTCTCATCCCGGGTCTGTATGTTTCTGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR TCA 90 bp | GTTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGCCAAAACCTACTTCGTaGGCCAACAGAGCCGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: VPWALDTPVGFQCLLKRGPKPTS*ANRAVG Trigger: TCCTACGGCTCTGTTGGCTCACGAAGTAGGTTTTGG...CCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR GCA 90 bp | GGTTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGCTTCCCAGCCAAGCCTaGAACAGTGACTTTGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSLGSGHTSGLPMPAQAWLPSQA*NSDFDP Trigger: GGGATCAAAGTCACTGTTGCAGGCTTGGCTGGGAAG...CCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR GCA 90 bp | CTGAGGTTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCCAGAGCCGTAGGACCTaGACAGATGGCAGCTATGAG | + |
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Preference number: 4 (lower is better) Translates to: LRFPGLWTHQWASNACSSQSRRT*TDGSYE Trigger: CTCATAGCTGCCATCTGTGCAGGTCCTACGGCTCTG...GCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAACCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CCA 90 bp | CCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCACCCAGATTTCCTCCTaGAAGAACCACCACATCGTA | + |
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Preference number: 4 (lower is better) Translates to: PGLWTHQWASNACSSVGPTQISS*KNHHIV Trigger: TACGATGTGGTGGTTCTTCCAGGAGGAAATCTGGGT...GGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CCA 90 bp | ACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCAGGGCTTGGGCTCGAGTGCCTCCACAATaGCTAGTGCAAACTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: THQWASNACSSVGPRAWARVPPQ*LVQTQS Trigger: GCTTTGAGTTTGCACTAGCCATTGTGGAGGCACTCG...AGCCCAAGCCCTGGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CCA 90 bp | TGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCAGCGAGTGCCTCCACAATaGCTAGTGCAAACTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: WALDTPVGFQCLLKRGAQRVPPQ*LVQTQS Trigger: GCTTTGAGTTTGCACTAGCCATTGTGGAGGCACTCG...CTGGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR GCA 90 bp | CTACTGCTGAGGTTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCCTTCCCAGCCAAGCCTaGAACAGTGACTTTGATCCC | + |
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Preference number: 4 (lower is better) Translates to: LLLRFPGLWTHQWASNACLPSQA*NSDFDP Trigger: GGGATCAAAGTCACTGTTGCAGGCTTGGCTGGGAAG...GCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAACCTCAGCAGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR GCA 90 bp | GCAAGGTTCAGAAACATACAGACCCGGGATGAGAGCCCCGTGTGGCGGCTGCTTCCCTTCCTGCTCTCCTaGTCCTTGAGGATCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: ARFRNIQTRDESPVWRLLPFLLS*SLRISF Trigger: GAAGGAGATCCTCAAGGAGCAGGAGAGCAGGAAGGG...AAGCAGCCGCCACACGGGGCTCTCATCCCGGGTCTGTATGTTTCTGAACCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR GCA 90 bp | GGTTCAGAAACATACAGACCCGGGATGAGAGCCCCGTGTGGCGGCTGCTTCACACAGAGCCGTAGGACCTaGACAGATGGCAGCTATGAG | + |
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Preference number: 4 (lower is better) Translates to: GSETYRPGMRAPCGGCFTQSRRT*TDGSYE Trigger: CTCATAGCTGCCATCTGTGCAGGTCCTACGGCTCTG...TGTGAAGCAGCCGCCACACGGGGCTCTCATCCCGGGTCTGTATGTTTCTGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGTTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGCCTTCACTTGGTTaGCCATGTCTTTCCCCACGA | + |
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Preference number: 4 (lower is better) Translates to: LRFPGLWTHQWASNACSSVPSLG*PCLSPR Trigger: TCGTGGGGAAAGACATGGCCAACCAAGTGAAGGCAC...GCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAACCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR GCA 90 bp | ACATACAGACCCGGGATGAGAGCCCCGTGTGGCGGCTGCTTCACATACTACTGCCTTCCCAGCCAAGCCTaGAACAGTGACTTTGATCCC | + |
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Preference number: 4 (lower is better) Translates to: TYRPGMRAPCGGCFTYYCLPSQA*NSDFDP Trigger: GGGATCAAAGTCACTGTTGCAGGCTTGGCTGGGAAG...GCAGTAGTATGTGAAGCAGCCGCCACACGGGGCTCTCATCCCGGGTCTGTATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR GCA 90 bp | CTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCAACATCGTATGGTCCCTaGGTTTTTGCATCTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LGSGHTSGLPMPAQAWGPTSYGP*VFASSR Trigger: TCTGGAAGATGCAAAAACGCAGGGACCATACGATGT...TGGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR GCA 90 bp | TCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCACATCGTATGGTCCCTaGGTTTTTGCATCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLGSGHTSGLPMPAQAWGTSYGP*VFASSR Trigger: TCTGGAAGATGCAAAAACGCAGGGACCATACGATGT...GCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CCA 90 bp | GTTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGACCCAGATTTCCTCCTaGAAGAACCACCACATCGTA | + |
|
Preference number: 4 (lower is better) Translates to: VPWALDTPVGFQCLLKRGTQISS*KNHHIV Trigger: TACGATGTGGTGGTTCTTCCAGGAGGAAATCTGGGT...CCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR GCA 90 bp | GTTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGACATCGTATGGTCCCTaGGTTTTTGCATCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPWALDTPVGFQCLLKRGTSYGP*VFASSR Trigger: TCTGGAAGATGCAAAAACGCAGGGACCATACGATGT...CCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR GCA 90 bp | TTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGACATCGTATGGTCCCTaGGTTTTTGCATCTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: FPGLWTHQWASNACSSVGTSYGP*VFASSR Trigger: TCTGGAAGATGCAAAAACGCAGGGACCATACGATGT...CCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR GCA 90 bp | TTCAGAAACATACAGACCCGGGATGAGAGCCCCGTGTGGCGGCTGCTTCACATACCCTTCCTGCTCTCCTaGTCCTTGAGGATCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: FRNIQTRDESPVWRLLHIPFLLS*SLRISF Trigger: GAAGGAGATCCTCAAGGAGCAGGAGAGCAGGAAGGG...TATGTGAAGCAGCCGCCACACGGGGCTCTCATCCCGGGTCTGTATGTTTCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGTTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCAACCACCACATCGTATaGTCCCTGCGTTTTTGCATC | + |
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Preference number: 4 (lower is better) Translates to: LRFPGLWTHQWASNACSSNHHIV*SLRFCI Trigger: GATGCAAAAACGCAGGGACCATACGATGTGGTGGTT...GCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAACCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CCA 90 bp | CTGAGGTTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCACCCAGATTTCCTCCTaGAAGAACCACCACATCGTA | + |
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Preference number: 4 (lower is better) Translates to: LRFPGLWTHQWASNACSSTQISS*KNHHIV Trigger: TACGATGTGGTGGTTCTTCCAGGAGGAAATCTGGGT...GCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAACCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CCA 90 bp | GCAAGGTTCAGAAACATACAGACCCGGGATGAGAGCCCCGTGTGGCGGCTGCTTCGAGTGCCTCCACAATaGCTAGTGCAAACTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: ARFRNIQTRDESPVWRLLRVPPQ*LVQTQS Trigger: GCTTTGAGTTTGCACTAGCCATTGTGGAGGCACTCG...AAGCAGCCGCCACACGGGGCTCTCATCCCGGGTCTGTATGTTTCTGAACCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CCA 90 bp | ATACAGACCCGGGATGAGAGCCCCGTGTGGCGGCTGCTTCACATACTACTGCTGACCCAGATTTCCTCCTaGAAGAACCACCACATCGTA | + |
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Preference number: 4 (lower is better) Translates to: IQTRDESPVWRLLHILLLTQISS*KNHHIV Trigger: TACGATGTGGTGGTTCTTCCAGGAGGAAATCTGGGT...CAGCAGTAGTATGTGAAGCAGCCGCCACACGGGGCTCTCATCCCGGGTCTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CCA 90 bp | TCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCTTGCATCTTCCAGACTaGTATCTGGACAAATCATTA | + |
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Preference number: 4 (lower is better) Translates to: SLGSGHTSGLPMPAQAWGLHLPD*YLDKSL Trigger: TAATGATTTGTCCAGATACCAGTCTGGAAGATGCAA...GCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CCA 90 bp | TGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCAGTTGCATCTTCCAGACTaGTATCTGGACAAATCATTA | + |
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Preference number: 4 (lower is better) Translates to: WALDTPVGFQCLLKRGAQLHLPD*YLDKSL Trigger: TAATGATTTGTCCAGATACCAGTCTGGAAGATGCAA...CTGGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CCA 90 bp | ACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCAGGGCTTGGGCTTTGCATCTTCCAGACTaGTATCTGGACAAATCATTA | + |
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Preference number: 4 (lower is better) Translates to: THQWASNACSSVGPRAWALHLPD*YLDKSL Trigger: TAATGATTTGTCCAGATACCAGTCTGGAAGATGCAA...AGCCCAAGCCCTGGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CCA 90 bp | CGGGATGAGAGCCCCGTGTGGCGGCTGCTTCACATACTACTGCTGAGGTTCCCTTTGCATCTTCCAGACTaGTATCTGGACAAATCATTA | + |
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Preference number: 4 (lower is better) Translates to: RDESPVWRLLHILLLRFPLHLPD*YLDKSL Trigger: TAATGATTTGTCCAGATACCAGTCTGGAAGATGCAA...AGGGAACCTCAGCAGTAGTATGTGAAGCAGCCGCCACACGGGGCTCTCATCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CAA 90 bp | CCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCCTGCTCTCCTGCTCCTaGAGGATCTCCTTCACCATA | + |
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Preference number: 5 (lower is better) Translates to: PGLWTHQWASNACSSVGPLLSCS*RISFTI Trigger: TATGGTGAAGGAGATCCTCAAGGAGCAGGAGAGCAG...GGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS GCA 90 bp | CATTACATCACGGCTACACTGCACGGGGTCCTTCCCAGCCAAGCCTaGAACAGTGACTTTGATCCCGGCTCGCCGCATGACATCCACAGG | + |
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Preference number: 5 (lower is better) Translates to: HYITATLHGVLPSQA*NSDFDPGSPHDIHR Trigger: CCTGTGGATGTCATGCGGCGAGCCGGGATCAAAGTCACTGTTGCAGGCTTGGCTGGGAAGGACCCCGTGCAGTGTAGCCGTGATGTAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 ENSMUST00000105676.8 ENSMUST00000128075.8 ENSMUST00000134751.8 ENSMUST00000146184.3 |
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| CDS-3UTR CAA 90 bp | TTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCTGCTCTCCTGCTCCTaGAGGATCTCCTTCACCATA | + |
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Preference number: 5 (lower is better) Translates to: FPGLWTHQWASNACSSVGLLSCS*RISFTI Trigger: TATGGTGAAGGAGATCCTCAAGGAGCAGGAGAGCAG...CCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CAA 90 bp | ACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCAGGGCTTGGGCTGGGTGTGTTGTGACCTaGCATCCAAAACCTACTTCG | + |
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Preference number: 5 (lower is better) Translates to: THQWASNACSSVGPRAWAGCVVT*HPKPTS Trigger: CGAAGTAGGTTTTGGATGCAAGGTCACAACACACCC...AGCCCAAGCCCTGGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CAA 90 bp | CTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGCCCAATGGTCCCTGCGTTTTaGCATCTTCCAGACTGGTAT | + |
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Preference number: 5 (lower is better) Translates to: LGSGHTSGLPMPAQAWGPMVPAF*HLPDWY Trigger: ATACCAGTCTGGAAGATGCAAAAACGCAGGGACCAT...TGGGCCCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CAA 90 bp | GTTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGGGGGGTGTGTTGTGACCTaGCATCCAAAACCTACTTCG | + |
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Preference number: 5 (lower is better) Translates to: VPWALDTPVGFQCLLKRGGCVVT*HPKPTS Trigger: CGAAGTAGGTTTTGGATGCAAGGTCACAACACACCC...CCCACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAAC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CAA 90 bp | CTACTGCTGAGGTTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCGGGTGTGTTGTGACCTaGCATCCAAAACCTACTTCG | + |
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Preference number: 5 (lower is better) Translates to: LLLRFPGLWTHQWASNACGCVVT*HPKPTS Trigger: CGAAGTAGGTTTTGGATGCAAGGTCACAACACACCC...GCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAACCTCAGCAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CAA 90 bp | AGGTTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCGTGATGGTCCCTGCGTTTTaGCATCTTCCAGACTGGTAT | + |
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Preference number: 5 (lower is better) Translates to: RFPGLWTHQWASNACSSVMVPAF*HLPDWY Trigger: ATACCAGTCTGGAAGATGCAAAAACGCAGGGACCAT...CACGCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CAA 90 bp | CTGAGGTTCCCTGGGCTCTGGACACACCAGTGGGCTTCCAATGCCTGCTCAAGCATGGTCCCTGCGTTTTaGCATCTTCCAGACTGGTAT | + |
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Preference number: 5 (lower is better) Translates to: LRFPGLWTHQWASNACSSMVPAF*HLPDWY Trigger: ATACCAGTCTGGAAGATGCAAAAACGCAGGGACCAT...GCTTGAGCAGGCATTGGAAGCCCACTGGTGTGTCCAGAGCCCAGGGAACCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS-3UTR CAA 90 bp | GCAAGGTTCAGAAACATACAGACCCGGGATGAGAGCCCCGTGTGGCGGCTGCTTGGGTGTGTTGTGACCTaGCATCCAAAACCTACTTCG | + |
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Preference number: 5 (lower is better) Translates to: ARFRNIQTRDESPVWRLLGCVVT*HPKPTS Trigger: CGAAGTAGGTTTTGGATGCAAGGTCACAACACACCC...AAGCAGCCGCCACACGGGGCTCTCATCCCGGGTCTGTATGTTTCTGAACCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030805.14 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS GCA 90 bp | TCTTCCAGACTGGTATCTGGACAAATCATTACATCACGGCTACACTaGACGGGGTCCTTCCCAGCCAAGCCTGCAACAGTGACTTTGATC | + |
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Preference number: 5 (lower is better) Translates to: SSRLVSGQIITSRLH*TGSFPAKPATVTLI Trigger: GATCAAAGTCACTGTTGCAGGCTTGGCTGGGAAGGACCCCGTGCAGTGTAGCCGTGATGTAATGATTTGTCCAGATACCAGTCTGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 ENSMUST00000105676.8 ENSMUST00000128075.8 ENSMUST00000134751.8 ENSMUST00000146184.3 |
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| CDS GCA 72 bp | ACGGCTACACTGCACGGGGTCCTTCCCAGCCAAGCCTaGAACAGTGACTTTGATCCCGGCTCGCCGCATGAC | + |
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Preference number: 6 (lower is better) Translates to: TATLHGVLPSQA*NSDFDPGSPHD Trigger: GTCATGCGGCGAGCCGGGATCAAAGTCACTGTTGCAGGCTTGGCTGGGAAGGACCCCGTGCAGTGTAGCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 ENSMUST00000105676.8 ENSMUST00000128075.8 ENSMUST00000134751.8 ENSMUST00000146184.3 |
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| CDS CCA 72 bp | GGTTGGCCATGTCTTTCCCCACGAGTGCCTCCACAATaGCTAGTGCAAACTCAAAGCTGGTCCCCGGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: GWPCLSPRVPPQ*LVQTQSWSPAR Trigger: GCGGGCCGGGGACCAGCTTTGAGTTTGCACTAGCCATTGTGGAGGCACTCGTGGGGAAAGACATGGCCAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 |
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| CDS CAA 90 bp | GATTTCCTCCTGGAAGAACCACCACATCGTATGGTCCCTGCGTTTTaGCATCTTCCAGACTGGTATCTGGACAAATCATTACATCACGGC | + |
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Preference number: 6 (lower is better) Translates to: DFLLEEPPHRMVPAF*HLPDWYLDKSLHHG Trigger: GCCGTGATGTAATGATTTGTCCAGATACCAGTCTGGAAGATGCAAAAACGCAGGGACCATACGATGTGGTGGTTCTTCCAGGAGGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 ENSMUST00000105676.8 ENSMUST00000128075.8 ENSMUST00000134751.8 ENSMUST00000146184.3 |
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| CDS GCA 72 bp | TGGAAGAACCACCACATCGTATGGTCCCTGCGTTTTTaGATCTTCCAGACTGGTATCTGGACAAATCATTAC | + |
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Preference number: 6 (lower is better) Translates to: WKNHHIVWSLRF*IFQTGIWTNHY Trigger: GTAATGATTTGTCCAGATACCAGTCTGGAAGATGCAAAAACGCAGGGACCATACGATGTGGTGGTTCTTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 ENSMUST00000105676.8 ENSMUST00000128075.8 ENSMUST00000134751.8 ENSMUST00000146184.3 |
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| CDS CAA 72 bp | CTGGAAGAACCACCACATCGTATGGTCCCTGCGTTTTaGCATCTTCCAGACTGGTATCTGGACAAATCATTA | + |
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Preference number: 6 (lower is better) Translates to: LEEPPHRMVPAF*HLPDWYLDKSL Trigger: TAATGATTTGTCCAGATACCAGTCTGGAAGATGCAAAAACGCAGGGACCATACGATGTGGTGGTTCTTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000030805.14 ENSMUST00000105673.8 ENSMUST00000105674.8 ENSMUST00000105675.8 ENSMUST00000105676.8 ENSMUST00000128075.8 ENSMUST00000134751.8 ENSMUST00000146184.3 |
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