Pregenerated sensors for PARG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021911Ensembl transcript IDs: ENSMUST00000022470.15, ENSMUST00000163350.8, ENSMUST00000164137.8, ENSMUST00000170129.8, ENSMUST00000170840.9, ENSMUST00000171279.2
Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTCACGTCTCACTTTCTCAGGCACAAACTGATCGAGGTAGCGTCTaGAGTGAAGTGCGTCAATGGCAACGATCTCCGTGCAGCGCCGCT | + |
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Preference number: 1 (lower is better) Translates to: AHVSLSQAQTDRGSV*SEVRQWQRSPCSAA Trigger: AGCGGCGCTGCACGGAGATCGTTGCCATTGACGCACTTCACTTCAGACGCTACCTCGATCAGTTTGTGCCTGAGAAAGTGAGACGTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| 3UTR GCA 90 bp | CACTTTCTCAGGCACAAACTGATCGAGGTAGCGTCTGAAGTGAAGTaGGTCAATGGCAACGATCTCCGTGCAGCGCCGCTGCCAATCGTC | + |
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Preference number: 1 (lower is better) Translates to: HFLRHKLIEVASEVK*VNGNDLRAAPLPIV Trigger: GACGATTGGCAGCGGCGCTGCACGGAGATCGTTGCCATTGACGCACTTCACTTCAGACGCTACCTCGATCAGTTTGTGCCTGAGAAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| 3UTR TCA 90 bp | TGTGCATGCTGTAAATGTCTCTCATCAACTCTGAGTCCCCAAAGGTaGAATAAACCACGTCACGTTCAGCCGCAGCAGCTGCCAGGATCT | + |
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Preference number: 1 (lower is better) Translates to: CACCKCLSSTLSPQR*NKPRHVQPQQLPGS Trigger: AGATCCTGGCAGCTGCTGCGGCTGAACGTGACGTGGTTTATTTCACCTTTGGGGACTCAGAGTTGATGAGAGACATTTACAGCATGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| 3UTR TCA 90 bp | TCAGGTGCCTGCCTTCTGTCCTGGCTAGTCAGTGGTCTCTGCACTTaGCTCAACAGCATGGTATATGAATGGATAAAGCTTGATGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: SGACLLSWLVSGLCT*LNSMVYEWIKLDVW Trigger: CCAGACATCAAGCTTTATCCATTCATATACCATGCTGTTGAGTCAAGTGCAGAGACCACTGACTAGCCAGGACAGAAGGCAGGCACCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| 3UTR GCA 90 bp | AAATCAGCATCAAGTCTCCAGCAAAGACCTTTGGTTACAGGACTATaGCCTCAGCACCACAGAACAAGCACTCACCCTAGCTGCAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: KSASSLQQRPLVTGL*PQHHRTSTHPSCKG Trigger: TCCTTTGCAGCTAGGGTGAGTGCTTGTTCTGTGGTGCTGAGGGCATAGTCCTGTAACCAAAGGTCTTTGCTGGAGACTTGATGCTGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
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| 3UTR TCA 90 bp | GTCAATTCAGACATCACACCCCACATTTCAAATAGGATGTCTCTTTaGGAGGAGGTCCTAGTCACTTGTTCCTCAGGTGCCTGCCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: VNSDITPHISNRMSL*EEVLVTCSSGACLL Trigger: CAGAAGGCAGGCACCTGAGGAACAAGTGACTAGGACCTCCTCTCAAAGAGACATCCTATTTGAAATGTGGGGTGTGATGTCTGAATTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
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| 3UTR TCA 90 bp | AGCAGTCTGGACAACACACAGACAGGAAGAGAAAGATCTAGAAGCTaGGTGCAACCTTTCTTGAGTTTTCCCAAGAAATCAAGTTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: SSLDNTQTGRERSRS*VQPFLSFPKKSSWK Trigger: TTTCCAACTTGATTTCTTGGGAAAACTCAAGAAAGGTTGCACTCAGCTTCTAGATCTTTCTCTTCCTGTCTGTGTGTTGTCCAGACTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
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| 3UTR TCA 90 bp | GAAGAAAAATTGAAGAAGCCATGTCTAAAGGCATGTCCACCAGGATaGACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTGAT | + |
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Preference number: 1 (lower is better) Translates to: EEKLKKPCLKACPPG*TRNNCICRRDCILD Trigger: ATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTGGTGGACATGCCTTTAGACATGGCTTCTTCAATTTTTCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
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| 3UTR-3UTR CCA 90 bp | AGTCACTTGTTCCTCAGGTGCCTGCCTTCTGTCCTGGCTAGTCAGTGGTCTCTGAGTGAAGTGCGTCAATaGCAACGATCTCCGTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SHLFLRCLPSVLASQWSLSEVRQ*QRSPCS Trigger: GCTGCACGGAGATCGTTGCCATTGACGCACTTCACT...CAGAGACCACTGACTAGCCAGGACAGAAGGCAGGCACCTGAGGAACAAGTGACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTGTTCCTCAGGTGCCTGCCTTCTGTCCTGGCTAGTCAGTGGTCTCTGCACTGGCGATCTGTTCCTGTaGCATCGTGACAGAATGATT | + |
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Preference number: 2 (lower is better) Translates to: TCSSGACLLSWLVSGLCTGDLFL*HRDRMI Trigger: AATCATTCTGTCACGATGTCACAGGAACAGATCGCC...AGTGCAGAGACCACTGACTAGCCAGGACAGAAGGCAGGCACCTGAGGAACAAGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGATGGCGCACACACGTTCAAAGGAGAGTGGGCAGGAGCAGAGAGAACACGGATGAAGCCTGGTTGTaGTTTACTGACTCCAGGATT | + |
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Preference number: 2 (lower is better) Translates to: SRWRTHVQRRVGRSRENTDEAWL*FTDSRI Trigger: AATCCTGGAGTCAGTAAATCACAACCAGGCTTCATC...CGTGTTCTCTCTGCTCCTGCCCACTCTCCTTTGAACGTGTGTGCGCCATCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTGTTCCTCAGGTGCCTGCCTTCTGTCCTGGCTAGTCAGTGGTCTCTGCACTTCCAGCAAAGACCTTTaGTTACAGGACTATGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: TCSSGACLLSWLVSGLCTSSKDL*LQDYAL Trigger: GAGGGCATAGTCCTGTAACCAAAGGTCTTTGCTGGA...AGTGCAGAGACCACTGACTAGCCAGGACAGAAGGCAGGCACCTGAGGAACAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCACTTGTTCCTCAGGTGCCTGCCTTCTGTCCTGGCTAGTCAGTGGTCTCTGGCATGTCCACCAGGATaGACAAGAAACAACTGCATA | + |
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Preference number: 2 (lower is better) Translates to: SHLFLRCLPSVLASQWSLACPPG*TRNNCI Trigger: TATGCAGTTGTTTCTTGTTCATCCTGGTGGACATGC...CAGAGACCACTGACTAGCCAGGACAGAAGGCAGGCACCTGAGGAACAAGTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| 3UTR-3UTR GCA 90 bp | AGTCACTTGTTCCTCAGGTGCCTGCCTTCTGTCCTGGCTAGTCAGTGGTCTCTGGTGGTATTGGCTGGGTaGAAATATTTGGCAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: SHLFLRCLPSVLASQWSLVVLAG*KYLADR Trigger: TCTGTCTGCCAAATATTTGCACCCAGCCAATACCAC...CAGAGACCACTGACTAGCCAGGACAGAAGGCAGGCACCTGAGGAACAAGTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCACTTGTTCCTCAGGTGCCTGCCTTCTGTCCTGGCTAGTCAGTGGTCTCTGATAAAGCTTGATGTCTaGTCCAGGGGTGGAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: SHLFLRCLPSVLASQWSLIKLDV*SRGGTV Trigger: AACTGTTCCACCCCTGGACCAGACATCAAGCTTTAT...CAGAGACCACTGACTAGCCAGGACAGAAGGCAGGCACCTGAGGAACAAGTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTGAGCTGACAGTAATCCACCTGCCACCCTGCCCAGTGACTTTATGTACTCTGGAGTTACAGAGATaGAGCCTGGTTGTGATTTAC | + |
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Preference number: 2 (lower is better) Translates to: GLELTVIHLPPCPVTLCTLELQR*SLVVIY Trigger: GTAAATCACAACCAGGCTTCATCTCTGTAACTCCAG...AGTACATAAAGTCACTGGGCAGGGTGGCAGGTGGATTACTGTCAGCTCAAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGGTGAAATAAACCACGTCACGTTCAGCCGCAGCAGCTGCCAGGATCTGTATAATAGGATGTCTCTTTaGGAGGAGGTCCTAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: KGEINHVTFSRSSCQDLYNRMSL*EEVLVT Trigger: AGTGACTAGGACCTCCTCTCAAAGAGACATCCTATT...ATACAGATCCTGGCAGCTGCTGCGGCTGAACGTGACGTGGTTTATTTCACCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| 3UTR-3UTR CCA 90 bp | AAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTCCGCCACCAAAGCAGTCTaGACAACACACAGACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: KSSDLIVLCPWLVGFMYSATKAV*TTHRQE Trigger: TTCCTGTCTGTGTGTTGTCCAGACTGCTTTGGTGGC...GGAGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
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| 3UTR-3UTR CCA 90 bp | ACTTGTTCCTCAGGTGCCTGCCTTCTGTCCTGGCTAGTCAGTGGTCTCTGCACTGCAAACTCAGATTTCTaGATTTGTAACTTCCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: TCSSGACLLSWLVSGLCTANSDF*ICNFLQ Trigger: TTGGAGGAAGTTACAAATCCAGAAATCTGAGTTTGC...AGTGCAGAGACCACTGACTAGCCAGGACAGAAGGCAGGCACCTGAGGAACAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTCCACCAGGATGAACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTAACTTCCTCCAAGTGTaGTGGTATCTGCTAGCCACC | + |
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Preference number: 2 (lower is better) Translates to: MSTRMNKKQLHMQKRLHPNFLQV*WYLLAT Trigger: GGTGGCTAGCAGATACCATCACACTTGGAGGAAGTT...AGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTGGTGGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
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| 3UTR-3UTR GCA 90 bp | GTATATGAATGGATAAAGCTTGATGTCTGGTCCAGGGGTGGAACAGTTTCTGCAGCGTCTGAAGTGAAGTaGGTCAATGGCAACGATCTC | + |
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Preference number: 2 (lower is better) Translates to: VYEWIKLDVWSRGGTVSAASEVK*VNGNDL Trigger: GAGATCGTTGCCATTGACGCACTTCACTTCAGACGC...TGCAGAAACTGTTCCACCCCTGGACCAGACATCAAGCTTTATCCATTCATATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGAGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGTCGTGCCAAAAAGAATaGTCAAAATATAGCCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: QRRVGRSRENTGTGVTEMSCQKE*SKYSLN Trigger: ATTCAGGCTATATTTTGACCATTCTTTTTGGCACGA...CATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCTCCTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTCCGCATGTCCACCAGGATaGACAAGAAACAACTGCATA | + |
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Preference number: 2 (lower is better) Translates to: KSSDLIVLCPWLVGFMYSACPPG*TRNNCI Trigger: TATGCAGTTGTTTCTTGTTCATCCTGGTGGACATGC...GGAGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
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| 3UTR-3UTR TCA 90 bp | AGCATCAAGTCTCCAGCAAAGACCTTTGGTTACAGGACTATGCCCTCAGCACCAGAGTGCAACCTTTCTTaGGTTTTCCCAAGAAATCAA | + |
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Preference number: 2 (lower is better) Translates to: SIKSPAKTFGYRTMPSAPECNLS*VFPRNQ Trigger: TTGATTTCTTGGGAAAACTCAAGAAAGGTTGCACTC...TGGTGCTGAGGGCATAGTCCTGTAACCAAAGGTCTTTGCTGGAGACTTGATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
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| 3UTR-3UTR GCA 90 bp | AGCATCAAGTCTCCAGCAAAGACCTTTGGTTACAGGACTATGCCCTCAGCACCAAGAAACAACTGCATATaGAGAAGAGACTGCATCCTT | + |
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Preference number: 2 (lower is better) Translates to: SIKSPAKTFGYRTMPSAPRNNCI*RRDCIL Trigger: AAGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCT...TGGTGCTGAGGGCATAGTCCTGTAACCAAAGGTCTTTGCTGGAGACTTGATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
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| 3UTR-3UTR GCA 90 bp | AACTTGTACACTTTTCCAACATCCAGCTTCCTCTCGGTAAGGAAAGTGTGCATGGTTTCCCGTGGCCACTaGAGAAAGATTTTCAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: NLYTFPTSSFLSVRKVCMVSRGH*RKIFRR Trigger: CCTTCTGAAAATCTTTCTGCAGTGGCCACGGGAAAC...CATGCACACTTTCCTTACCGAGAGGAAGCTGGATGTTGGAAAAGTGTACAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| 3UTR-3UTR TCA 90 bp | GATTTGAAACAGGGCTTTTCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTAATAGGATGTCTCTTTaGGAGGAGGTCCTAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: DLKQGFSKAQTSLSSVLGNRMSL*EEVLVT Trigger: AGTGACTAGGACCTCCTCTCAAAGAGACATCCTATT...ACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGAAAAGCCCTGTTTCAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
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| 3UTR-3UTR TCA 90 bp | TCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTAATAGGATGTCTCTTTaGGAGGAGGTCCTAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: SKAQTSLSSVLGWWVLCTNRMSL*EEVLVT Trigger: AGTGACTAGGACCTCCTCTCAAAGAGACATCCTATT...AGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
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| 3UTR-3UTR CCA 90 bp | ATGTCCACCAGGATGAACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTCTGTCCTTGGTTGGTaGGTTTTATGTACTCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: MSTRMNKKQLHMQKRLHPSVLGW*VLCTPA Trigger: TGCAGGAGTACATAAAACCCACCAACCAAGGACAGA...AGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTGGTGGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
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| 3UTR-3UTR GCA 90 bp | ATGTCCACCAGGATGAACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTAGCACTCACCCTAGCTaGAAAGGAAAAACAAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: MSTRMNKKQLHMQKRLHPSTHPS*KGKTSL Trigger: AAGACTTGTTTTTCCTTTGCAGCTAGGGTGAGTGCT...AGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTGGTGGACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
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| 3UTR-3UTR GCA 90 bp | GAGCTGACAGTAATCCACCTGCCACCCTGCCCAGTGACTTTATGTACTTACATAGATCATAATATGCACTaGTCCTATGAACACTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: ELTVIHLPPCPVTLCTYIDHNMH*SYEHSN Trigger: ATTGGAGTGTTCATAGGAGCAGTGCATATTATGATC...TATGTAAGTACATAAAGTCACTGGGCAGGGTGGCAGGTGGATTACTGTCAGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
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| 3UTR-3UTR TCA 90 bp | AACTTGTACACTTTTCCAACATCCAGCTTCCTCTCGGTAAGGAAAGTGTGCATGGAGTGCAACCTTTCTTaGGTTTTCCCAAGAAATCAA | + |
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Preference number: 2 (lower is better) Translates to: NLYTFPTSSFLSVRKVCMECNLS*VFPRNQ Trigger: TTGATTTCTTGGGAAAACTCAAGAAAGGTTGCACTC...CATGCACACTTTCCTTACCGAGAGGAAGCTGGATGTTGGAAAAGTGTACAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| 3UTR-3UTR GCA 90 bp | GATTTGAAACAGGGCTTTTCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTGGTTTTATGTACTCCTaGAGACACAACACAAATGCT | + |
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Preference number: 2 (lower is better) Translates to: DLKQGFSKAQTSLSSVLGGFMYS*RHNTNA Trigger: AGCATTTGTGTTGTGTCTGCAGGAGTACATAAAACC...ACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGAAAAGCCCTGTTTCAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
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| 3UTR CAA 90 bp | AGATTTTATATTCTTTTCTTTAAGACAGAGTTCTTCTGGGTAGGATaGGCTAGTCTGGATCTCAATGTTCATCAGGCTGGCCTTGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: RFYILFFKTEFFWVG*ASLDLNVHQAGLEL Trigger: CAGCTCAAGGCCAGCCTGATGAACATTGAGATCCAGACTAGCCAATCCTACCCAGAAGAACTCTGTCTTAAAGAAAAGAATATAAAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
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| 3UTR-3UTR TCA 90 bp | AACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATAACTTCCTCCAAGTGTaGTGGTATCTGCTAGCCACC | + |
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Preference number: 2 (lower is better) Translates to: NNCICRRDCILDYKCGLYNFLQV*WYLLAT Trigger: GGTGGCTAGCAGATACCATCACACTTGGAGGAAGTT...ATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATACACACTTAGATCAGAACTTCCTCCAAGTGTaGTGGTATCTGCTAGCCACC | + |
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Preference number: 2 (lower is better) Translates to: RRDCILDYKCGLYTHLDQNFLQV*WYLLAT Trigger: GGTGGCTAGCAGATACCATCACACTTGGAGGAAGTT...CTGATCTAAGTGTGTATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
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| 3UTR-3UTR CCA 90 bp | AACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATGCCACCAAAGCAGTCTaGACAACACACAGACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: NNCICRRDCILDYKCGLYATKAV*TTHRQE Trigger: TTCCTGTCTGTGTGTTGTCCAGACTGCTTTGGTGGC...ATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATACACACTTAGATCAGGCCACCAAAGCAGTCTaGACAACACACAGACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: RRDCILDYKCGLYTHLDQATKAV*TTHRQE Trigger: TTCCTGTCTGTGTGTTGTCCAGACTGCTTTGGTGGC...CTGATCTAAGTGTGTATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
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| 3UTR-3UTR CCA 90 bp | GATTTGAAACAGGGCTTTTCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTGCAAACTCAGATTTCTaGATTTGTAACTTCCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: DLKQGFSKAQTSLSSVLGANSDF*ICNFLQ Trigger: TTGGAGGAAGTTACAAATCCAGAAATCTGAGTTTGC...ACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGAAAAGCCCTGTTTCAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATACACACTTAGATCAGTGTCTGGTCCAGGGGTaGAACAGTTTCTGCATTCTT | + |
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Preference number: 2 (lower is better) Translates to: RRDCILDYKCGLYTHLDQCLVQG*NSFCIL Trigger: AAGAATGCAGAAACTGTTCCACCCCTGGACCAGACA...CTGATCTAAGTGTGTATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTCACTTCACTTCTCATCACATACACAATACAGAGATTATATACGGACACACAGCTTTTTACCTCTGTaGCCTTTAATTATCGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: QSLHFSSHTQYRDYIRTHSFLPL*PLIIVP Trigger: TGGCACGATAATTAAAGGTCACAGAGGTAAAAAGCT...GTGTGTCCGTATATAATCTCTGTATTGTGTATGTGATGAGAAGTGAAGTGACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
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| 3UTR-3UTR TCA 90 bp | AACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATGAGTGCAACCTTTCTTaGGTTTTCCCAAGAAATCAA | + |
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Preference number: 2 (lower is better) Translates to: NNCICRRDCILDYKCGLYECNLS*VFPRNQ Trigger: TTGATTTCTTGGGAAAACTCAAGAAAGGTTGCACTC...ATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
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| 3UTR-3UTR GCA 90 bp | AACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATGGTTTTATGTACTCCTaGAGACACAACACAAATGCT | + |
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Preference number: 2 (lower is better) Translates to: NNCICRRDCILDYKCGLYGFMYS*RHNTNA Trigger: AGCATTTGTGTTGTGTCTGCAGGAGTACATAAAACC...ATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATACACACTTAGATCAGCTGGAACCAGAACTTTaGAAGTCTGAAAAAGGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: RRDCILDYKCGLYTHLDQLEPEL*KSEKGF Trigger: AAACCCTTTTTCAGACTTCCAAAGTTCTGGTTCCAG...CTGATCTAAGTGTGTATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| 3UTR GCA 72 bp | AGGCACAAACTGATCGAGGTAGCGTCTGAAGTGAAGTaGGTCAATGGCAACGATCTCCGTGCAGCGCCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RHKLIEVASEVK*VNGNDLRAAPL Trigger: CAGCGGCGCTGCACGGAGATCGTTGCCATTGACGCACTTCACTTCAGACGCTACCTCGATCAGTTTGTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
||
| 3UTR CCA 72 bp | GGAACAGCAGATGGCGCACACACGTTCAAAGGAGAGTaGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: GTADGAHTFKGE*AGAERTRALEL Trigger: TAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCTCCTTTGAACGTGTGTGCGCCATCTGCTGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| 3UTR GCA 72 bp | AGTGCGTCAATGGCAACGATCTCCGTGCAGCGCCGCTaGCAATCGTCCTTTTCACTCCCATCTTCATGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SASMATISVQRR*QSSFSLPSSWL Trigger: AAGCCATGAAGATGGGAGTGAAAAGGACGATTGGCAGCGGCGCTGCACGGAGATCGTTGCCATTGACGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
||
| 3UTR TCA 72 bp | TCACTTTCTCAGGCACAAACTGATCGAGGTAGCGTCTaGAGTGAAGTGCGTCAATGGCAACGATCTCCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SLSQAQTDRGSV*SEVRQWQRSPC Trigger: GCACGGAGATCGTTGCCATTGACGCACTTCACTTCAGACGCTACCTCGATCAGTTTGTGCCTGAGAAAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
||
| 3UTR GCA 72 bp | TCAAGTCTCCAGCAAAGACCTTTGGTTACAGGACTATaGCCTCAGCACCACAGAACAAGCACTCACCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSLQQRPLVTGL*PQHHRTSTHPS Trigger: GCTAGGGTGAGTGCTTGTTCTGTGGTGCTGAGGGCATAGTCCTGTAACCAAAGGTCTTTGCTGGAGACTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCCACCAGGATGAACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTGGAGGTCCTAGTCACTaGTTCCTCAGGTGCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: MSTRMNKKQLHMQKRLHPGGPSH*FLRCLP Trigger: AGGCAGGCACCTGAGGAACAAGTGACTAGGACCTCC...AGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTGGTGGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCTCAGCACCACAGAACAAGCACTCACCCTAGCTGCAAAGGAAAAACAAGTGTTTCAGGAGTGGTATaGGCTGGGTGCAAATATTTG | + |
|
Preference number: 3 (lower is better) Translates to: CPQHHRTSTHPSCKGKTSVSGVV*AGCKYL Trigger: CAAATATTTGCACCCAGCCAATACCACTCCTGAAAC...ACTTGTTTTTCCTTTGCAGCTAGGGTGAGTGCTTGTTCTGTGGTGCTGAGGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACAAATGTGGATGGAGGTCCTAGTCACTaGTTCCTCAGGTGCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QETTAYAEETASLITNVDGGPSH*FLRCLP Trigger: AGGCAGGCACCTGAGGAACAAGTGACTAGGACCTCC...ATCCACATTTGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
||
| 3UTR TCA 72 bp | TGCCTTCTGTCCTGGCTAGTCAGTGGTCTCTGCACTTaGCTCAACAGCATGGTATATGAATGGATAAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: CLLSWLVSGLCT*LNSMVYEWIKL Trigger: AAGCTTTATCCATTCATATACCATGCTGTTGAGTCAAGTGCAGAGACCACTGACTAGCCAGGACAGAAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
||
| 3UTR CCA 72 bp | AAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTaGGTTTTATGTACTCCTGCAGACACAACACAAATG | + |
|
Preference number: 3 (lower is better) Translates to: KAQTSLSSVLGW*VLCTPADTTQM Trigger: CATTTGTGTTGTGTCTGCAGGAGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| 3UTR CCA 72 bp | TCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTaGTGGGTTTTATGTACTCCTGCAGACACAACACAA | + |
|
Preference number: 3 (lower is better) Translates to: SKAQTSLSSVLG*WVLCTPADTTQ Trigger: TTGTGTTGTGTCTGCAGGAGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATACACACTTAGATCAGGGAGGTCCTAGTCACTaGTTCCTCAGGTGCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RRDCILDYKCGLYTHLDQGGPSH*FLRCLP Trigger: AGGCAGGCACCTGAGGAACAAGTGACTAGGACCTCC...CTGATCTAAGTGTGTATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCTCAGCACCACAGAACAAGCACTCACCCTAGCTGCAAAGGAAAAACAAGTGAAGAGACTGCATCCTaGATTACAAATGTGGATTAT | + |
|
Preference number: 3 (lower is better) Translates to: CPQHHRTSTHPSCKGKTSEETAS*ITNVDY Trigger: ATAATCCACATTTGTAATCAAGGATGCAGTCTCTTC...ACTTGTTTTTCCTTTGCAGCTAGGGTGAGTGCTTGTTCTGTGGTGCTGAGGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
||
| 3UTR TCA 72 bp | TTGAAGAAGCCATGTCTAAAGGCATGTCCACCAGGATaGACAAGAAACAACTGCATATGCAGAAGAGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: LKKPCLKACPPG*TRNNCICRRDC Trigger: GCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTGGTGGACATGCCTTTAGACATGGCTTCTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
||
| 3UTR TCA 72 bp | GAAAGTGTGCATGCTGTAAATGTCTCTCATCAACTCTaGGTCCCCAAAGGTGAAATAAACCACGTCACGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ESVHAVNVSHQL*VPKGEINHVTF Trigger: GAACGTGACGTGGTTTATTTCACCTTTGGGGACTCAGAGTTGATGAGAGACATTTACAGCATGCACACTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
||
| 3UTR CCA 72 bp | AACAGCATGGTATATGAATGGATAAAGCTTGATGTCTaGTCCAGGGGTGGAACAGTTTCTGCATTCTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: NSMVYEWIKLDV*SRGGTVSAFFI Trigger: AATGAAGAATGCAGAAACTGTTCCACCCCTGGACCAGACATCAAGCTTTATCCATTCATATACCATGCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATACACACTTAGATCAGCAGTGGTCTCTGCACTaGACTCAACAGCATGGTATA | + |
|
Preference number: 3 (lower is better) Translates to: RRDCILDYKCGLYTHLDQQWSLH*TQQHGI Trigger: TATACCATGCTGTTGAGTCAAGTGCAGAGACCACTG...CTGATCTAAGTGTGTATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
||
| 3UTR-3UTR CAA 90 bp | AACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATGACTTTTATTGGCTTTaGCTGACAGCTAGACTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NNCICRRDCILDYKCGLYDFYWL*LTARLE Trigger: TTCCAGTCTAGCTGTCAGCAAAAGCCAATAAAAGTC...ATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATACACACTTAGATCAGGAAGAGACTGCATCCTaGATTACAAATGTGGATTAT | + |
|
Preference number: 3 (lower is better) Translates to: RRDCILDYKCGLYTHLDQEETAS*ITNVDY Trigger: ATAATCCACATTTGTAATCAAGGATGCAGTCTCTTC...CTGATCTAAGTGTGTATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 ENSMUST00000170840.9 |
||
| 3UTR CCA 72 bp | AATGCTTTCATTGGGGCAGATGATAGAATACTCATTTaGAAAGTAGCTGAAGTCAAAAACTTTATTGACGGT | + |
|
Preference number: 3 (lower is better) Translates to: NAFIGADDRILI*KVAEVKNFIDG Trigger: ACCGTCAATAAAGTTTTTGACTTCAGCTACTTTCCAAATGAGTATTCTATCATCTGCCCCAATGAAAGCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR GCA 90 bp | GAACAGCAGATGGCGCACACACGTTCAAAGGAGAGTGGGCAGGAGCAGAGAGAAGTGGCGTTGCCTCTGTaGGGTCCCGCCCGCCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: EQQMAHTRSKESGQEQREVALPL*GPARPE Trigger: CTCGGGGCGGGCGGGACCGCACAGAGGCAACGCCAC...TTCTCTCTGCTCCTGCCCACTCTCCTTTGAACGTGTGTGCGCCATCTGCTGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCTCAGCACCACAGAACAAGCACTCACCCTAGCTGCAAAGGAAAAACAAGTGTGGCGTTGCCTCTGTaGGGTCCCGCCCGCCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CPQHHRTSTHPSCKGKTSVALPL*GPARPE Trigger: CTCGGGGCGGGCGGGACCGCACAGAGGCAACGCCAC...ACTTGTTTTTCCTTTGCAGCTAGGGTGAGTGCTTGTTCTGTGGTGCTGAGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 |
||
| CDS-3UTR GCA 90 bp | CGTCCTTTTCACTCCCATCTTCATGGCTTCGGGCCCAACGATAAGTTTCAGCATGTGGCGTTGCCTCTGTaGGGTCCCGCCCGCCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPFHSHLHGFGPNDKFQHVALPL*GPARPE Trigger: CTCGGGGCGGGCGGGACCGCACAGAGGCAACGCCAC...ATGCTGAAACTTATCGTTGGGCCCGAAGCCATGAAGATGGGAGTGAAAAGGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATGTGGCGTTGCCTCTGTaGGGTCCCGCCCGCCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISYYAPSRLSKCSSWLVHVALPL*GPARPE Trigger: CTCGGGGCGGGCGGGACCGCACAGAGGCAACGCCAC...ATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTTGAGCTGACAGTAATCCACCTGCCACCCTGCCCAGTGACTTTATGTACTGAACACGCCTCTGCCTaGCAGGGAAGCTCCGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLELTVIHLPPCPVTLCTEHASA*QGSSGS Trigger: ACTCCCGGAGCTTCCCTGGCAGGCAGAGGCGTGTTC...AGTACATAAAGTCACTGGGCAGGGTGGCAGGTGGATTACTGTCAGCTCAAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCTCAGCACCACAGAACAAGCACTCACCCTAGCTGCAAAGGAAAAACAAGTGAACACGCCTCTGCCTaGCAGGGAAGCTCCGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CPQHHRTSTHPSCKGKTSEHASA*QGSSGS Trigger: ACTCCCGGAGCTTCCCTGGCAGGCAGAGGCGTGTTC...ACTTGTTTTTCCTTTGCAGCTAGGGTGAGTGCTTGTTCTGTGGTGCTGAGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGAAGCCTCAGTTGCTTCTGGCCTaGCCATCTCCTACTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVGRSRENTGTGVTEMKPQLLLA*PSPTVG Trigger: GCCAACAGTAGGAGATGGGCAGGCCAGAAGCAACTG...AGGCTTCATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATGAACACGCCTCTGCCTaGCAGGGAAGCTCCGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISYYAPSRLSKCSSWLVHEHASA*QGSSGS Trigger: ACTCCCGGAGCTTCCCTGGCAGGCAGAGGCGTGTTC...ATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | GCAGTCTGGACAACACACAGACAGGAAGAGAAAGATCTAGAAGCTGAGTGCAACTCGAGAACACGCCTCTaGCTGCCAGGGAAGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AVWTTHRQEEKDLEAECNSRTRL*LPGKLR Trigger: CCGGAGCTTCCCTGGCAGGCAGAGGCGTGTTCTCGA...GTTGCACTCAGCTTCTAGATCTTTCTCTTCCTGTCTGTGTGTTGTCCAGACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTTGAGCTGACAGTAATCCACCTGCCACCCTGCCCAGTGACTTTATGTACTCGCGGGAGGCTCACTTaGCAAAAGCTGTTCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GLELTVIHLPPCPVTLCTRGRLT*QKLFCM Trigger: CATGCAGAACAGCTTTTGGCAAGTGAGCCTCCCGCG...AGTACATAAAGTCACTGGGCAGGGTGGCAGGTGGATTACTGTCAGCTCAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACTGGCAACGATCTCCGTaGAGCGCCGCTGCCAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: TFLTMLRPDLASAPPGWYWQRSP*SAAANR Trigger: ACGATTGGCAGCGGCGCTGCACGGAGATCGTTGCCA...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATGGACGGGAGCGTCCTTaGGGTCGAGAACACGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISYYAPSRLSKCSSWLVHGRERP*GREHAS Trigger: AGAGGCGTGTTCTCGACCCCAAGGACGCTCCCGTCC...ATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACTCCGTGCAGCGCCGCTaGCAATCGTCCTTTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TFLTMLRPDLASAPPGWYSVQRR*QSSFSL Trigger: GAGTGAAAAGGACGATTGGCAGCGGCGCTGCACGGA...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGAAGCCTACTTACAGTTGCTTCTaGCCTGCCCATCTCCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: RVGRSRENTGTGVTEMKPTYSCF*PAHLLL Trigger: CAGTAGGAGATGGGCAGGCCAGAAGCAACTGTAAGT...AGGCTTCATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGAAGCCGTCTACATCCATTGGTaGCTCAGGCTCACTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESGQEQREHGHWSYRDEAVYIHW*LRLTFF Trigger: AAAGAAAGTGAGCCTGAGTCACCAATGGATGTAGAC...GGCTTCATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATATCCATCTAGATGATCGAGGTAGCGTCTaGAGTGAAGTGCGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: APSRLSKCSSWLVHIHLDDRGSV*SEVRQW Trigger: CCATTGACGCACTTCACTTCAGACGCTACCTCGATC...ATCTAGATGGATATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCCACCAGGATGAACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTGAACACGCCTCTGCCTaGCAGGGAAGCTCCGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MSTRMNKKQLHMQKRLHPEHASA*QGSSGS Trigger: ACTCCCGGAGCTTCCCTGGCAGGCAGAGGCGTGTTC...AGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTGGTGGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGAAGCCAAAAGCTGTTCTGCATaGTTCCCTTCATTCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ESGQEQREHGHWSYRDEAKSCSA*FPSFCH Trigger: GTGGCAGAATGAAGGGAAGCATGCAGAACAGCTTTT...GGCTTCATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR GCA 90 bp | AGCATCAAGTCTCCAGCAAAGACCTTTGGTTACAGGACTATGCCCTCAGCACCACAGTTGCTTCTGGCCTaGCCATCTCCTACTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SIKSPAKTFGYRTMPSAPQLLLA*PSPTVG Trigger: GCCAACAGTAGGAGATGGGCAGGCCAGAAGCAACTG...TGGTGCTGAGGGCATAGTCCTGTAACCAAAGGTCTTTGCTGGAGACTTGATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR GCA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACCAGTTGCTTCTGGCCTaGCCATCTCCTACTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TFLTMLRPDLASAPPGWYQLLLA*PSPTVG Trigger: GCCAACAGTAGGAGATGGGCAGGCCAGAAGCAACTG...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGAAGCCGTGGTATTGGCTGGGTaGAAATATTTGGCAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ESGQEQREHGHWSYRDEAVVLAG*KYLADR Trigger: TCTGTCTGCCAAATATTTGCACCCAGCCAATACCAC...GGCTTCATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTCCTGGCAACGATCTCCGTaGAGCGCCGCTGCCAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: KSSDLIVLCPWLVGFMYSWQRSP*SAAANR Trigger: ACGATTGGCAGCGGCGCTGCACGGAGATCGTTGCCA...GGAGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR CCA 90 bp | ATGTCCACCAGGATGAACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTGGACGGGAGCGTCCTTaGGGTCGAGAACACGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MSTRMNKKQLHMQKRLHPGRERP*GREHAS Trigger: AGAGGCGTGTTCTCGACCCCAAGGACGCTCCCGTCC...AGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTGGTGGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGAAGCCAGTTTCCAGATGGCTTaGCATTTAAGTCACTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESGQEQREHGHWSYRDEASFQMA*HLSHWS Trigger: GGACCAGTGACTTAAATGCCAAGCCATCTGGAAACT...GGCTTCATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATATCCATCTAGATAGTGAAGTGCGTCAATaGCAACGATCTCCGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: APSRLSKCSSWLVHIHLDSEVRQ*QRSPCS Trigger: GCTGCACGGAGATCGTTGCCATTGACGCACTTCACT...ATCTAGATGGATATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGAAGCCTTGCCAAAAGCTGTTCTaGATGCTTCCCTTCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVGRSRENTGTGVTEMKPCQKLF*MLPFIL Trigger: CAGAATGAAGGGAAGCATGCAGAACAGCTTTTGGCA...AGGCTTCATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATCGCGGGAGGCTCACTTaGCAAAAGCTGTTCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ISYYAPSRLSKCSSWLVHRGRLT*QKLFCM Trigger: CATGCAGAACAGCTTTTGGCAAGTGAGCCTCCCGCG...ATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | TCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTTGGCAACGATCTCCGTaGAGCGCCGCTGCCAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: SKAQTSLSSVLGWWVLCTWQRSP*SAAANR Trigger: ACGATTGGCAGCGGCGCTGCACGGAGATCGTTGCCA...AGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR TCA 90 bp | CAAAGGAGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGGTTTTCTTTACTTTCTaGTTCAGCTGTCTTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRRVGRSRENTGTGVTEMVFFTF*FSCLGS Trigger: GGACCCAAGACAGCTGAATCAGAAAGTAAAGAAAAC...CATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCTCCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGAAGCCTGGTGTAAGAAACTGCTaGTTGTCTCTGTCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVGRSRENTGTGVTEMKPGVRNC*LSLSSS Trigger: TGAAGAAGACAGAGACAATCAGCAGTTTCTTACACC...AGGCTTCATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATTCCACCTCCTCCTGTTaGCAGCCTGTACAGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISYYAPSRLSKCSSWLVHSTSSC*QPVQSF Trigger: GAAAGACTGTACAGGCTGTCAACAGGAGGAGGTGGA...ATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTGACAGTAATCCACCTGCCACCCTGCCCAGTGACTTTATGTACTTACATATCCACCTCCTCCTGTTaGCAGCCTGTACAGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELTVIHLPPCPVTLCTYISTSSC*QPVQSF Trigger: GAAAGACTGTACAGGCTGTCAACAGGAGGAGGTGGA...TATGTAAGTACATAAAGTCACTGGGCAGGGTGGCAGGTGGATTACTGTCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATATCCATCTAGATCGAACAGTCACTGTGTaGCTTGCAGATGGTCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: APSRLSKCSSWLVHIHLDRTVTV*LADGLK Trigger: CTTAAGACCATCTGCAAGTCACACAGTGACTGTTCG...ATCTAGATGGATATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATATCCATCTAGATCTGAGTCCCCAAAGGTaGAATAAACCACGTCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: APSRLSKCSSWLVHIHLDLSPQR*NKPRHV Trigger: AACGTGACGTGGTTTATTTCACCTTTGGGGACTCAG...ATCTAGATGGATATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | AGCATCAAGTCTCCAGCAAAGACCTTTGGTTACAGGACTATGCCCTCAGCACCATGCTTCCCTTCATTCTaGCACTTGCACACACTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIKSPAKTFGYRTMPSAPCFPSF*HLHTLA Trigger: TGCGAGTGTGTGCAAGTGGCAGAATGAAGGGAAGCA...TGGTGCTGAGGGCATAGTCCTGTAACCAAAGGTCTTTGCTGGAGACTTGATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR GCA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACTGCTTCCCTTCATTCTaGCACTTGCACACACTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TFLTMLRPDLASAPPGWYCFPSF*HLHTLA Trigger: TGCGAGTGTGTGCAAGTGGCAGAATGAAGGGAAGCA...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | GAACAGCAGATGGCGCACACACGTTCAAAGGAGAGTGGGCAGGAGCAGAGAGAATCCCTTTTTCCATGCTaGTTGGAACTTCTACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: EQQMAHTRSKESGQEQRESLFPC*LELLHS Trigger: AGAGTGTAGAAGTTCCAAGCAGCATGGAAAAAGGGA...TTCTCTCTGCTCCTGCCCACTCTCCTTTGAACGTGTGTGCGCCATCTGCTGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR GCA 90 bp | GAACAGCAGATGGCGCACACACGTTCAAAGGAGAGTGGGCAGGAGCAGAGAGAAGAATCCCTTTTTCCATaGTGCTTGGAACTTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: EQQMAHTRSKESGQEQREESLFP*CLELLH Trigger: GTGTAGAAGTTCCAAGCAGCATGGAAAAAGGGATTC...TTCTCTCTGCTCCTGCCCACTCTCCTTTGAACGTGTGTGCGCCATCTGCTGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCCACCAGGATGAACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTCCGTGCAGCGCCGCTaGCAATCGTCCTTTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: MSTRMNKKQLHMQKRLHPSVQRR*QSSFSL Trigger: GAGTGAAAAGGACGATTGGCAGCGGCGCTGCACGGA...AGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTGGTGGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR GCA 90 bp | AGCATCAAGTCTCCAGCAAAGACCTTTGGTTACAGGACTATGCCCTCAGCACCAGCGTCTGAAGTGAAGTaGGTCAATGGCAACGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIKSPAKTFGYRTMPSAPASEVK*VNGNDL Trigger: GAGATCGTTGCCATTGACGCACTTCACTTCAGACGC...TGGTGCTGAGGGCATAGTCCTGTAACCAAAGGTCTTTGCTGGAGACTTGATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR GCA 90 bp | GCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATATCCATCTAGATGTTTCCCGTGGCCACTaGAGAAAGATTTTCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: APSRLSKCSSWLVHIHLDVSRGH*RKIFRR Trigger: CCTTCTGAAAATCTTTCTGCAGTGGCCACGGGAAAC...ATCTAGATGGATATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCAGCACCACAGAACAAGCACTCACCCTAGCTGCAAAGGAAAAACAAGTACTTACAGTTGCTTCTaGCCTGCCCATCTCCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: CPQHHRTSTHPSCKGKTSTYSCF*PAHLLL Trigger: CAGTAGGAGATGGGCAGGCCAGAAGCAACTGTAAGT...ACTTGTTTTTCCTTTGCAGCTAGGGTGAGTGCTTGTTCTGTGGTGCTGAGGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR CCA 90 bp | GCAGTCTGGACAACACACAGACAGGAAGAGAAAGATCTAGAAGCTGAGTGCAACAGTGAAGTGCGTCAATaGCAACGATCTCCGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVWTTHRQEEKDLEAECNSEVRQ*QRSPCS Trigger: GCTGCACGGAGATCGTTGCCATTGACGCACTTCACT...GTTGCACTCAGCTTCTAGATCTTTCTCTTCCTGTCTGTGTGTTGTCCAGACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCAGCACCACAGAACAAGCACTCACCCTAGCTGCAAAGGAAAAACAAGTAGCCCCAGTTTCCCGTaGCCACTGCAGAAAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPQHHRTSTHPSCKGKTSSPSFP*PLQKDF Trigger: AAAATCTTTCTGCAGTGGCCACGGGAAACTGGGGCT...ACTTGTTTTTCCTTTGCAGCTAGGGTGAGTGCTTGTTCTGTGGTGCTGAGGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR TCA 90 bp | AGCATCAAGTCTCCAGCAAAGACCTTTGGTTACAGGACTATGCCCTCAGCACCACGAACAGTCACTGTGTaGCTTGCAGATGGTCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SIKSPAKTFGYRTMPSAPRTVTV*LADGLK Trigger: CTTAAGACCATCTGCAAGTCACACAGTGACTGTTCG...TGGTGCTGAGGGCATAGTCCTGTAACCAAAGGTCTTTGCTGGAGACTTGATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR TCA 90 bp | TGCCCTCAGCACCACAGAACAAGCACTCACCCTAGCTGCAAAGGAAAAACAAGTCTGAGTCCCCAAAGGTaGAATAAACCACGTCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: CPQHHRTSTHPSCKGKTSLSPQR*NKPRHV Trigger: AACGTGACGTGGTTTATTTCACCTTTGGGGACTCAG...ACTTGTTTTTCCTTTGCAGCTAGGGTGAGTGCTTGTTCTGTGGTGCTGAGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR GCA 90 bp | GCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATATCCATCTAGATCACACACTCGCAGTCTaGTGTTGGTTCAAATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: APSRLSKCSSWLVHIHLDHTLAV*CWFKYC Trigger: ACAGTATTTGAACCAACAGCAGACTGCGAGTGTGTG...ATCTAGATGGATATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | GATTTGAAACAGGGCTTTTCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTCGCGGGAGGCTCACTTaGCAAAAGCTGTTCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: DLKQGFSKAQTSLSSVLGRGRLT*QKLFCM Trigger: CATGCAGAACAGCTTTTGGCAAGTGAGCCTCCCGCG...ACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGAAAAGCCCTGTTTCAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR GCA 90 bp | ATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATGCGTCTGAAGTGAAGTaGGTCAATGGCAACGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISYYAPSRLSKCSSWLVHASEVK*VNGNDL Trigger: GAGATCGTTGCCATTGACGCACTTCACTTCAGACGC...ATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATACTTACAGTTGCTTCTaGCCTGCCCATCTCCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: ISYYAPSRLSKCSSWLVHTYSCF*PAHLLL Trigger: CAGTAGGAGATGGGCAGGCCAGAAGCAACTGTAAGT...ATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGAAGCCTTTGCTCATCAAAGACTaGACTTGTTTCTTCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVGRSRENTGTGVTEMKPLLIKD*TCFFIC Trigger: GCAGATGAAGAAACAAGTCCAGTCTTTGATGAGCAA...AGGCTTCATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACCTTAAGGAAGGCAAATaGATCCCACACCGAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: TFLTMLRPDLASAPPGWYLKEGK*IPHRGI Trigger: AATGCCTCGGTGTGGGATCCATTTGCCTTCCTTAAG...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGAAGCCATCTTTGTAATGTGTTaGAAAAGGTTTCGGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESGQEQREHGHWSYRDEAIFVMC*KRFRNL Trigger: GAGGTTCCGAAACCTTTTCCAACACATTACAAAGAT...GGCTTCATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTCCAGTGAAGTGCGTCAATaGCAACGATCTCCGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSSDLIVLCPWLVGFMYSSEVRQ*QRSPCS Trigger: GCTGCACGGAGATCGTTGCCATTGACGCACTTCACT...GGAGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATAGCCCCAGTTTCCCGTaGCCACTGCAGAAAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISYYAPSRLSKCSSWLVHSPSFP*PLQKDF Trigger: AAAATCTTTCTGCAGTGGCCACGGGAAACTGGGGCT...ATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATATCCATCTAGATGTTTTCTTTACTTTCTaGTTCAGCTGTCTTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: APSRLSKCSSWLVHIHLDVFFTF*FSCLGS Trigger: GGACCCAAGACAGCTGAATCAGAAAGTAAAGAAAAC...ATCTAGATGGATATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR TCA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACTCTCTGTCTTCTTCATaGTCTGTGTCACTGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TFLTMLRPDLASAPPGWYSLSSS*SVSLWS Trigger: TGACCACAGTGACACAGATCATGAAGAAGACAGAGA...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCCACCAGGATGAACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTCCACCTCCTCCTGTTaGCAGCCTGTACAGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MSTRMNKKQLHMQKRLHPSTSSC*QPVQSF Trigger: GAAAGACTGTACAGGCTGTCAACAGGAGGAGGTGGA...AGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTGGTGGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR TCA 90 bp | TGCCCTCAGCACCACAGAACAAGCACTCACCCTAGCTGCAAAGGAAAAACAAGTGTCTACATCCATTGGTaGCTCAGGCTCACTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPQHHRTSTHPSCKGKTSVYIHW*LRLTFF Trigger: AAAGAAAGTGAGCCTGAGTCACCAATGGATGTAGAC...ACTTGTTTTTCCTTTGCAGCTAGGGTGAGTGCTTGTTCTGTGGTGCTGAGGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR TCA 90 bp | ATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATGGCGATCTGTTCCTGTaGCATCGTGACAGAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: ISYYAPSRLSKCSSWLVHGDLFL*HRDRMI Trigger: AATCATTCTGTCACGATGTCACAGGAACAGATCGCC...ATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR TCA 90 bp | TCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTGATCGAGGTAGCGTCTaGAGTGAAGTGCGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SKAQTSLSSVLGWWVLCTDRGSV*SEVRQW Trigger: CCATTGACGCACTTCACTTCAGACGCTACCTCGATC...AGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR TCA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACGTCTCTCATCAACTCTaGGTCCCCAAAGGTGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: TFLTMLRPDLASAPPGWYVSHQL*VPKGEI Trigger: TATTTCACCTTTGGGGACTCAGAGTTGATGAGAGAC...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACTGCCAAAAGCTGTTCTaGATGCTTCCCTTCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TFLTMLRPDLASAPPGWYCQKLF*MLPFIL Trigger: CAGAATGAAGGGAAGCATGCAGAACAGCTTTTGGCA...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATATCCATCTAGATGAATCCCTTTTTCCATaGTGCTTGGAACTTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: APSRLSKCSSWLVHIHLDESLFP*CLELLH Trigger: GTGTAGAAGTTCCAAGCAGCATGGAAAAAGGGATTC...ATCTAGATGGATATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACGTGGTATTGGCTGGGTaGAAATATTTGGCAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFLTMLRPDLASAPPGWYVVLAG*KYLADR Trigger: TCTGTCTGCCAAATATTTGCACCCAGCCAATACCAC...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | GCAGTCTGGACAACACACAGACAGGAAGAGAAAGATCTAGAAGCTGAGTGCAACGTTTCCCGTGGCCACTaGAGAAAGATTTTCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVWTTHRQEEKDLEAECNVSRGH*RKIFRR Trigger: CCTTCTGAAAATCTTTCTGCAGTGGCCACGGGAAAC...GTTGCACTCAGCTTCTAGATCTTTCTCTTCCTGTCTGTGTGTTGTCCAGACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTCACTTCACTTCTCATCACATACACAATACAGAGATTATATACGGACACAGGACGGGAGCGTCCTTaGGGTCGAGAACACGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVTSLLITYTIQRLYTDTGRERP*GREHAS Trigger: AGAGGCGTGTTCTCGACCCCAAGGACGCTCCCGTCC...TGTGTCCGTATATAATCTCTGTATTGTGTATGTGATGAGAAGTGAAGTGACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACAGTTTCCAGATGGCTTaGCATTTAAGTCACTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFLTMLRPDLASAPPGWYSFQMA*HLSHWS Trigger: GGACCAGTGACTTAAATGCCAAGCCATCTGGAAACT...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTGACAGTAATCCACCTGCCACCCTGCCCAGTGACTTTATGTACTTACATACTTAAGGAAGGCAAATaGATCCCACACCGAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: ELTVIHLPPCPVTLCTYILKEGK*IPHRGI Trigger: AATGCCTCGGTGTGGGATCCATTTGCCTTCCTTAAG...TATGTAAGTACATAAAGTCACTGGGCAGGGTGGCAGGTGGATTACTGTCAGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACAGGAGTGGTATTGGCTaGGTGCAAATATTTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFLTMLRPDLASAPPGWYRSGIG*VQIFGR Trigger: TCTGCCAAATATTTGCACCCAGCCAATACCACTCCT...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTCTGGACAACACACAGACAGGAAGAGAAAGATCTAGAAGCTGAGTGCAACTGTCTGGTCCAGGGGTaGAACAGTTTCTGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AVWTTHRQEEKDLEAECNCLVQG*NSFCIL Trigger: AAGAATGCAGAAACTGTTCCACCCCTGGACCAGACA...GTTGCACTCAGCTTCTAGATCTTTCTCTTCCTGTCTGTGTGTTGTCCAGACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR TCA 90 bp | GCAGTCTGGACAACACACAGACAGGAAGAGAAAGATCTAGAAGCTGAGTGCAACTCTCTGTCTTCTTCATaGTCTGTGTCACTGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVWTTHRQEEKDLEAECNSLSSS*SVSLWS Trigger: TGACCACAGTGACACAGATCATGAAGAAGACAGAGA...GTTGCACTCAGCTTCTAGATCTTTCTCTTCCTGTCTGTGTGTTGTCCAGACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR TCA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACGGTGTAAGAAACTGCTaGTTGTCTCTGTCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TFLTMLRPDLASAPPGWYGVRNC*LSLSSS Trigger: TGAAGAAGACAGAGACAATCAGCAGTTTCTTACACC...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATGTCTACATCCATTGGTaGCTCAGGCTCACTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISYYAPSRLSKCSSWLVHVYIHW*LRLTFF Trigger: AAAGAAAGTGAGCCTGAGTCACCAATGGATGTAGAC...ATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATAAAAGCTGTTCTGCATaGTTCCCTTCATTCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISYYAPSRLSKCSSWLVHKSCSA*FPSFCH Trigger: GTGGCAGAATGAAGGGAAGCATGCAGAACAGCTTTT...ATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACTCCCTTTTTCCATGCTaGTTGGAACTTCTACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFLTMLRPDLASAPPGWYSLFPC*LELLHS Trigger: AGAGTGTAGAAGTTCCAAGCAGCATGGAAAAAGGGA...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | AGCATCAAGTCTCCAGCAAAGACCTTTGGTTACAGGACTATGCCCTCAGCACCAGAATCCCTTTTTCCATaGTGCTTGGAACTTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: SIKSPAKTFGYRTMPSAPESLFP*CLELLH Trigger: GTGTAGAAGTTCCAAGCAGCATGGAAAAAGGGATTC...TGGTGCTGAGGGCATAGTCCTGTAACCAAAGGTCTTTGCTGGAGACTTGATGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR GCA 90 bp | TCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTGCGTCTGAAGTGAAGTaGGTCAATGGCAACGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKAQTSLSSVLGWWVLCTASEVK*VNGNDL Trigger: GAGATCGTTGCCATTGACGCACTTCACTTCAGACGC...AGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR CCA 90 bp | GCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATATCCATCTAGATTTGCTCATCAAAGACTaGACTTGTTTCTTCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: APSRLSKCSSWLVHIHLDLLIKD*TCFFIC Trigger: GCAGATGAAGAAACAAGTCCAGTCTTTGATGAGCAA...ATCTAGATGGATATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTCCCTTAAGGAAGGCAAATaGATCCCACACCGAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: KSSDLIVLCPWLVGFMYSLKEGK*IPHRGI Trigger: AATGCCTCGGTGTGGGATCCATTTGCCTTCCTTAAG...GGAGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR CCA 90 bp | GCAGTCTGGACAACACACAGACAGGAAGAGAAAGATCTAGAAGCTGAGTGCAACAGGAGTGGTATTGGCTaGGTGCAAATATTTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVWTTHRQEEKDLEAECNRSGIG*VQIFGR Trigger: TCTGCCAAATATTTGCACCCAGCCAATACCACTCCT...GTTGCACTCAGCTTCTAGATCTTTCTCTTCCTGTCTGTGTGTTGTCCAGACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR TCA 90 bp | GATTTGAAACAGGGCTTTTCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTGGCGATCTGTTCCTGTaGCATCGTGACAGAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: DLKQGFSKAQTSLSSVLGGDLFL*HRDRMI Trigger: AATCATTCTGTCACGATGTCACAGGAACAGATCGCC...ACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGAAAAGCCCTGTTTCAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR TCA 90 bp | CAGGATGAACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACAGATCGAGGTAGCGTCTaGAGTGAAGTGCGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: QDEQETTAYAEETASLITDRGSV*SEVRQW Trigger: CCATTGACGCACTTCACTTCAGACGCTACCTCGATC...TGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR CCA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACCCCATCTCCTACTGTTaGCTTTGTATTTGCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TFLTMLRPDLASAPPGWYPISYC*LCICKF Trigger: AAACTTGCAAATACAAAGCCAACAGTAGGAGATGGG...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGAGCTGACAGTAATCCACCTGCCACCCTGCCCAGTGACTTTATGTACTTCAGCTTCTCTTGCTTaGCAACTTGAAAGTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: GLELTVIHLPPCPVTLCTSASLA*QLESLF Trigger: AAATAAACTTTCAAGTTGCCAAGCAAGAGAAGCTGA...AGTACATAAAGTCACTGGGCAGGGTGGCAGGTGGATTACTGTCAGCTCAAGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR CCA 90 bp | GATTTGAAACAGGGCTTTTCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGTCTGGTCCAGGGGTaGAACAGTTTCTGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DLKQGFSKAQTSLSSVLGCLVQG*NSFCIL Trigger: AAGAATGCAGAAACTGTTCCACCCCTGGACCAGACA...ACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGAAAAGCCCTGTTTCAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| 3UTR CAA 72 bp | TTCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTaGGTGGGTTTTATGTACTCCTGCAGACACAACACA | + |
|
Preference number: 4 (lower is better) Translates to: FKSSDLIVLCPW*VGFMYSCRHNT Trigger: TGTGTTGTGTCTGCAGGAGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR TCA 90 bp | AAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTCCGTTTTCTTTACTTTCTaGTTCAGCTGTCTTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSSDLIVLCPWLVGFMYSVFFTF*FSCLGS Trigger: GGACCCAAGACAGCTGAATCAGAAAGTAAAGAAAAC...GGAGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR TCA 90 bp | TCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTGTCTCTCATCAACTCTaGGTCCCCAAAGGTGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SKAQTSLSSVLGWWVLCTVSHQL*VPKGEI Trigger: TATTTCACCTTTGGGGACTCAGAGTTGATGAGAGAC...AGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCCACCAGGATGAACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTGTCTCTCATCAACTCTaGGTCCCCAAAGGTGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: MSTRMNKKQLHMQKRLHPVSHQL*VPKGEI Trigger: TATTTCACCTTTGGGGACTCAGAGTTGATGAGAGAC...AGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTGGTGGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR GCA 90 bp | GATTTGAAACAGGGCTTTTCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTGTGGTATTGGCTGGGTaGAAATATTTGGCAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: DLKQGFSKAQTSLSSVLGVVLAG*KYLADR Trigger: TCTGTCTGCCAAATATTTGCACCCAGCCAATACCAC...ACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGAAAAGCCCTGTTTCAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR GCA 90 bp | TCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTGTGGTATTGGCTGGGTaGAAATATTTGGCAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKAQTSLSSVLGWWVLCTVVLAG*KYLADR Trigger: TCTGTCTGCCAAATATTTGCACCCAGCCAATACCAC...AGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR CCA 90 bp | TGCCCTCAGCACCACAGAACAAGCACTCACCCTAGCTGCAAAGGAAAAACAAGTATCTTTGTAATGTGTTaGAAAAGGTTTCGGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPQHHRTSTHPSCKGKTSIFVMC*KRFRNL Trigger: GAGGTTCCGAAACCTTTTCCAACACATTACAAAGAT...ACTTGTTTTTCCTTTGCAGCTAGGGTGAGTGCTTGTTCTGTGGTGCTGAGGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170129.8 |
||
| CDS-3UTR CCA 90 bp | TCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTATAAAGCTTGATGTCTaGTCCAGGGGTGGAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKAQTSLSSVLGWWVLCTIKLDV*SRGGTV Trigger: AACTGTTCCACCCCTGGACCAGACATCAAGCTTTAT...AGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR CCA 90 bp | ATGTCCACCAGGATGAACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTATAAAGCTTGATGTCTaGTCCAGGGGTGGAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: MSTRMNKKQLHMQKRLHPIKLDV*SRGGTV Trigger: AACTGTTCCACCCCTGGACCAGACATCAAGCTTTAT...AGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTGGTGGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR TCA 90 bp | GATTTGAAACAGGGCTTTTCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTGGTGTAAGAAACTGCTaGTTGTCTCTGTCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLKQGFSKAQTSLSSVLGGVRNC*LSLSSS Trigger: TGAAGAAGACAGAGACAATCAGCAGTTTCTTACACC...ACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGAAAAGCCCTGTTTCAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR TCA 90 bp | ATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATTTTTCTTCTGTCCTCTaGCTTGGAAATTCTCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISYYAPSRLSKCSSWLVHFSSVL*LGNSHE Trigger: TTCATGAGAATTTCCAAGTCAGAGGACAGAAGAAAA...ATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCACTTCACTTCTCATCACATACACAATACAGAGATTATATACGGACACACTGCTTCCCTTCATTCTaGCACTTGCACACACTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSLHFSSHTQYRDYIRTHCFPSF*HLHTLA Trigger: TGCGAGTGTGTGCAAGTGGCAGAATGAAGGGAAGCA...GTGTGTCCGTATATAATCTCTGTATTGTGTATGTGATGAGAAGTGAAGTGACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTCCTTGCTCATCAAAGACTaGACTTGTTTCTTCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSSDLIVLCPWLVGFMYSLLIKD*TCFFIC Trigger: GCAGATGAAGAAACAAGTCCAGTCTTTGATGAGCAA...GGAGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR CCA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACTCAGCTTCTCTTGCTTaGCAACTTGAAAGTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: TFLTMLRPDLASAPPGWYSASLA*QLESLF Trigger: AAATAAACTTTCAAGTTGCCAAGCAAGAGAAGCTGA...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATATCTTTGTAATGTGTTaGAAAAGGTTTCGGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISYYAPSRLSKCSSWLVHIFVMC*KRFRNL Trigger: GAGGTTCCGAAACCTTTTCCAACACATTACAAAGAT...ATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACAAATGTGGATAGCCCCAGTTTCCCGTaGCCACTGCAGAAAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: QETTAYAEETASLITNVDSPSFP*PLQKDF Trigger: AAAATCTTTCTGCAGTGGCCACGGGAAACTGGGGCT...ATCCACATTTGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| 3UTR CAA 72 bp | ATTCTTTTCTTTAAGACAGAGTTCTTCTGGGTAGGATaGGCTAGTCTGGATCTCAATGTTCATCAGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILFFKTEFFWVG*ASLDLNVHQAG Trigger: GCCAGCCTGATGAACATTGAGATCCAGACTAGCCAATCCTACCCAGAAGAACTCTGTCTTAAAGAAAAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR TCA 90 bp | CAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACAAATGTGGATGGCGATCTGTTCCTGTaGCATCGTGACAGAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: QETTAYAEETASLITNVDGDLFL*HRDRMI Trigger: AATCATTCTGTCACGATGTCACAGGAACAGATCGCC...ATCCACATTTGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR TCA 90 bp | CAGTCACTTCACTTCTCATCACATACACAATACAGAGATTATATACGGACACACGGCGATCTGTTCCTGTaGCATCGTGACAGAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: QSLHFSSHTQYRDYIRTHGDLFL*HRDRMI Trigger: AATCATTCTGTCACGATGTCACAGGAACAGATCGCC...GTGTGTCCGTATATAATCTCTGTATTGTGTATGTGATGAGAAGTGAAGTGACTG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTCCATCTTTGTAATGTGTTaGAAAAGGTTTCGGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSSDLIVLCPWLVGFMYSIFVMC*KRFRNL Trigger: GAGGTTCCGAAACCTTTTCCAACACATTACAAAGAT...GGAGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR TCA 90 bp | GATTTGAAACAGGGCTTTTCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTTTTCTTCTGTCCTCTaGCTTGGAAATTCTCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: DLKQGFSKAQTSLSSVLGFSSVL*LGNSHE Trigger: TTCATGAGAATTTCCAAGTCAGAGGACAGAAGAAAA...ACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGAAAAGCCCTGTTTCAAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR TCA 90 bp | ACAGTCACTTCACTTCTCATCACATACACAATACAGAGATTATATACGGACACACGAACAGTCACTGTGTaGCTTGCAGATGGTCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVTSLLITYTIQRLYTDTRTVTV*LADGLK Trigger: CTTAAGACCATCTGCAAGTCACACAGTGACTGTTCG...TGTGTCCGTATATAATCTCTGTATTGTGTATGTGATGAGAAGTGAAGTGACTGT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCACTTCACTTCTCATCACATACACAATACAGAGATTATATACGGACACACCACACACTCGCAGTCTaGTGTTGGTTCAAATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSLHFSSHTQYRDYIRTHHTLAV*CWFKYC Trigger: ACAGTATTTGAACCAACAGCAGACTGCGAGTGTGTG...GTGTGTCCGTATATAATCTCTGTATTGTGTATGTGATGAGAAGTGAAGTGACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACAAATGTGGATAAAAGCTGTTCTGCATaGTTCCCTTCATTCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QETTAYAEETASLITNVDKSCSA*FPSFCH Trigger: GTGGCAGAATGAAGGGAAGCATGCAGAACAGCTTTT...ATCCACATTTGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR CCA 90 bp | TCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTAGCATGGTATATGAATaGATAAAGCTTGATGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKAQTSLSSVLGWWVLCTSMVYE*IKLDVW Trigger: CCAGACATCAAGCTTTATCCATTCATATACCATGCT...AGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR TCA 90 bp | AACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATCTGAGTCCCCAAAGGTaGAATAAACCACGTCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: NNCICRRDCILDYKCGLYLSPQR*NKPRHV Trigger: AACGTGACGTGGTTTATTTCACCTTTGGGGACTCAG...ATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
||
| CDS-3UTR GCA 90 bp | CAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACAAATGTGGATTCCCTTTTTCCATGCTaGTTGGAACTTCTACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QETTAYAEETASLITNVDSLFPC*LELLHS Trigger: AGAGTGTAGAAGTTCCAAGCAGCATGGAAAAAGGGA...ATCCACATTTGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS-3UTR CCA 90 bp | CAGGATGAACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACACCCATCTCCTACTGTTaGCTTTGTATTTGCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QDEQETTAYAEETASLITPISYC*LCICKF Trigger: AAACTTGCAAATACAAAGCCAACAGTAGGAGATGGG...TGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
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| CDS-3UTR CCA 90 bp | ACAGTCACTTCACTTCTCATCACATACACAATACAGAGATTATATACGGACACAAGGAGTGGTATTGGCTaGGTGCAAATATTTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVTSLLITYTIQRLYTDTRSGIG*VQIFGR Trigger: TCTGCCAAATATTTGCACCCAGCCAATACCACTCCT...TGTGTCCGTATATAATCTCTGTATTGTGTATGTGATGAGAAGTGAAGTGACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
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| CDS-3UTR GCA 90 bp | AGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATACACACTTAGATCAGCACACACTCGCAGTCTaGTGTTGGTTCAAATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRDCILDYKCGLYTHLDQHTLAV*CWFKYC Trigger: ACAGTATTTGAACCAACAGCAGACTGCGAGTGTGTG...CTGATCTAAGTGTGTATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
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| CDS-3UTR GCA 90 bp | AGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATACACACTTAGATCAGTGCCAAAAGCTGTTCTaGATGCTTCCCTTCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRDCILDYKCGLYTHLDQCQKLF*MLPFIL Trigger: CAGAATGAAGGGAAGCATGCAGAACAGCTTTTGGCA...CTGATCTAAGTGTGTATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
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| CDS-3UTR CCA 90 bp | AACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATAGTTTCCAGATGGCTTaGCATTTAAGTCACTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NNCICRRDCILDYKCGLYSFQMA*HLSHWS Trigger: GGACCAGTGACTTAAATGCCAAGCCATCTGGAAACT...ATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
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| CDS-3UTR CCA 90 bp | CAGGATGAACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACATCAGCTTCTCTTGCTTaGCAACTTGAAAGTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: QDEQETTAYAEETASLITSASLA*QLESLF Trigger: AAATAAACTTTCAAGTTGCCAAGCAAGAGAAGCTGA...TGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
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| CDS-3UTR CCA 90 bp | CAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACAAATGTGGATAGCATGGTATATGAATaGATAAAGCTTGATGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QETTAYAEETASLITNVDSMVYE*IKLDVW Trigger: CCAGACATCAAGCTTTATCCATTCATATACCATGCT...ATCCACATTTGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
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| CDS-3UTR TCA 90 bp | ACAGTCACTTCACTTCTCATCACATACACAATACAGAGATTATATACGGACACATTTTCTTCTGTCCTCTaGCTTGGAAATTCTCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVTSLLITYTIQRLYTDTFSSVL*LGNSHE Trigger: TTCATGAGAATTTCCAAGTCAGAGGACAGAAGAAAA...TGTGTCCGTATATAATCTCTGTATTGTGTATGTGATGAGAAGTGAAGTGACTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
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| CDS-3UTR CAA 90 bp | CAAAGGAGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGTGGACGGGAGCGTCCTaGGGGTCGAGAACACGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QRRVGRSRENTGTGVTEMWTGAS*GSRTRL Trigger: GAGGCGTGTTCTCGACCCCAAGGACGCTCCCGTCCA...CATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCTCCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
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| CDS-3UTR CAA 90 bp | GCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATATCCATCTAGATTGGACGGGAGCGTCCTaGGGGTCGAGAACACGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: APSRLSKCSSWLVHIHLDWTGAS*GSRTRL Trigger: GAGGCGTGTTCTCGACCCCAAGGACGCTCCCGTCCA...ATCTAGATGGATATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
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| CDS-3UTR CAA 90 bp | AAAGGTGAAATAAACCACGTCACGTTCAGCCGCAGCAGCTGCCAGGATCTGTATTGGACGGGAGCGTCCTaGGGGTCGAGAACACGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KGEINHVTFSRSSCQDLYWTGAS*GSRTRL Trigger: GAGGCGTGTTCTCGACCCCAAGGACGCTCCCGTCCA...ATACAGATCCTGGCAGCTGCTGCGGCTGAACGTGACGTGGTTTATTTCACCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
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| CDS-3UTR CAA 90 bp | GAACAGCAGATGGCGCACACACGTTCAAAGGAGAGTGGGCAGGAGCAGAGAGAACCGCGGGAGGCTCACTaGCCAAAAGCTGTTCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: EQQMAHTRSKESGQEQREPREAH*PKAVLH Trigger: ATGCAGAACAGCTTTTGGCAAGTGAGCCTCCCGCGG...TTCTCTCTGCTCCTGCCCACTCTCCTTTGAACGTGTGTGCGCCATCTGCTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGAAGCCTCCACTGCACTTACAGTaGCTTCTGGCCTGCCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RVGRSRENTGTGVTEMKPPLHLQ*LLACPS Trigger: AGATGGGCAGGCCAGAAGCAACTGTAAGTGCAGTGG...AGGCTTCATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
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| CDS-3UTR CAA 90 bp | TCAAAAGCTCAGACCTCATTGTCCTCTGTCCTTGGTTGGTGGGTTTTATGTACTTGGACGGGAGCGTCCTaGGGGTCGAGAACACGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SKAQTSLSSVLGWWVLCTWTGAS*GSRTRL Trigger: GAGGCGTGTTCTCGACCCCAAGGACGCTCCCGTCCA...AGTACATAAAACCCACCAACCAAGGACAGAGGACAATGAGGTCTGAGCTTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
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| CDS-3UTR CAA 90 bp | TGCCCTCAGCACCACAGAACAAGCACTCACCCTAGCTGCAAAGGAAAAACAAGTCCGCGGGAGGCTCACTaGCCAAAAGCTGTTCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CPQHHRTSTHPSCKGKTSPREAH*PKAVLH Trigger: ATGCAGAACAGCTTTTGGCAAGTGAGCCTCCCGCGG...ACTTGTTTTTCCTTTGCAGCTAGGGTGAGTGCTTGTTCTGTGGTGCTGAGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
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| CDS-3UTR CAA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACCCGCGGGAGGCTCACTaGCCAAAAGCTGTTCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TFLTMLRPDLASAPPGWYPREAH*PKAVLH Trigger: ATGCAGAACAGCTTTTGGCAAGTGAGCCTCCCGCGG...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
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| CDS-3UTR CAA 90 bp | CAAAGGAGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGCGCCATCAGCTTCTCTaGCTTGGCAACTTGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QRRVGRSRENTGTGVTEMRHQLL*LGNLKV Trigger: AACTTTCAAGTTGCCAAGCAAGAGAAGCTGATGGCG...CATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCTCCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGAAGCCTTCTGATTCAGCTGTCTaGGGTCCTTTAGTATCCATC | + |
|
Preference number: 5 (lower is better) Translates to: RVGRSRENTGTGVTEMKPSDSAV*GPLVSI Trigger: GATGGATACTAAAGGACCCAAGACAGCTGAATCAGA...AGGCTTCATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
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| CDS-3UTR CAA 90 bp | ATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATCCACTGCACTTACAGTaGCTTCTGGCCTGCCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: ISYYAPSRLSKCSSWLVHPLHLQ*LLACPS Trigger: AGATGGGCAGGCCAGAAGCAACTGTAAGTGCAGTGG...ATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
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| CDS-3UTR CAA 90 bp | ACAGCAGATGGCGCACACACGTTCAAAGGAGAGTGGGCAGGAGCAGAGAGAACAGTTTCAGGAGTGGTATaGGCTGGGTGCAAATATTTG | + |
|
Preference number: 5 (lower is better) Translates to: TADGAHTFKGEWAGAERTVSGVV*AGCKYL Trigger: CAAATATTTGCACCCAGCCAATACCACTCCTGAAAC...TGTTCTCTCTGCTCCTGCCCACTCTCCTTTGAACGTGTGTGCGCCATCTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
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| CDS-3UTR CAA 90 bp | GCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATATCCATCTAGATCGCCATCAGCTTCTCTaGCTTGGCAACTTGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: APSRLSKCSSWLVHIHLDRHQLL*LGNLKV Trigger: AACTTTCAAGTTGCCAAGCAAGAGAAGCTGATGGCG...ATCTAGATGGATATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
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| CDS-3UTR CAA 90 bp | TGCCCTCAGCACCACAGAACAAGCACTCACCCTAGCTGCAAAGGAAAAACAAGTGAGTTTCCAGATGGCTaGGCATTTAAGTCACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CPQHHRTSTHPSCKGKTSEFPDG*AFKSLV Trigger: GACCAGTGACTTAAATGCCAAGCCATCTGGAAACTC...ACTTGTTTTTCCTTTGCAGCTAGGGTGAGTGCTTGTTCTGTGGTGCTGAGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
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| CDS-3UTR CAA 90 bp | CAAAGGAGAGTGGGCAGGAGCAGAGAGAACACGGGCACTGGAGTTACAGAGATGATGTCTGACTTCACATaGTTCTTTTCTTCTGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QRRVGRSRENTGTGVTEMMSDFT*FFSSVL Trigger: GAGGACAGAAGAAAAGAACAATGTGAAGTCAGACAT...CATCTCTGTAACTCCAGTGCCCGTGTTCTCTCTGCTCCTGCCCACTCTCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
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| CDS-3UTR CAA 90 bp | TGCCCTCAGCACCACAGAACAAGCACTCACCCTAGCTGCAAAGGAAAAACAAGTCAGTGGTCTCTGCACTaGACTCAACAGCATGGTATA | + |
|
Preference number: 5 (lower is better) Translates to: CPQHHRTSTHPSCKGKTSQWSLH*TQQHGI Trigger: TATACCATGCTGTTGAGTCAAGTGCAGAGACCACTG...ACTTGTTTTTCCTTTGCAGCTAGGGTGAGTGCTTGTTCTGTGGTGCTGAGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
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| CDS-3UTR CAA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACTCTGATTCAGCTGTCTaGGGTCCTTTAGTATCCATC | + |
|
Preference number: 5 (lower is better) Translates to: TFLTMLRPDLASAPPGWYSDSAV*GPLVSI Trigger: GATGGATACTAAAGGACCCAAGACAGCTGAATCAGA...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
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| CDS-3UTR CAA 90 bp | ACATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACAGTTGTCTACATCCATaGGTGACTCAGGCTCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: TFLTMLRPDLASAPPGWYSCLHP*VTQAHF Trigger: AAAGTGAGCCTGAGTCACCAATGGATGTAGACAACT...GTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
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| CDS-3UTR CAA 90 bp | ATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATGAGTTTCCAGATGGCTaGGCATTTAAGTCACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ISYYAPSRLSKCSSWLVHEFPDG*AFKSLV Trigger: GACCAGTGACTTAAATGCCAAGCCATCTGGAAACTC...ATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
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| CDS-3UTR CAA 90 bp | GCAGTCTGGACAACACACAGACAGGAAGAGAAAGATCTAGAAGCTGAGTGCAACCAGTGGTCTCTGCACTaGACTCAACAGCATGGTATA | + |
|
Preference number: 5 (lower is better) Translates to: AVWTTHRQEEKDLEAECNQWSLH*TQQHGI Trigger: TATACCATGCTGTTGAGTCAAGTGCAGAGACCACTG...GTTGCACTCAGCTTCTAGATCTTTCTCTTCCTGTCTGTGTGTTGTCCAGACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
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| CDS-3UTR CAA 90 bp | CAGGATGAACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACACCACTGCACTTACAGTaGCTTCTGGCCTGCCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QDEQETTAYAEETASLITPLHLQ*LLACPS Trigger: AGATGGGCAGGCCAGAAGCAACTGTAAGTGCAGTGG...TGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
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| CDS-3UTR CAA 90 bp | GCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATATCCATCTAGATATGTCTGACTTCACATaGTTCTTTTCTTCTGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: APSRLSKCSSWLVHIHLDMSDFT*FFSSVL Trigger: GAGGACAGAAGAAAAGAACAATGTGAAGTCAGACAT...ATCTAGATGGATATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
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| CDS-3UTR CAA 90 bp | ATTTCTTACTATGCTCCGTCCAGACTTAGCAAGTGCTCCTCCTGGCTGGTACATGTTTCAGGAGTGGTATaGGCTGGGTGCAAATATTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISYYAPSRLSKCSSWLVHVSGVV*AGCKYL Trigger: CAAATATTTGCACCCAGCCAATACCACTCCTGAAAC...ATGTACCAGCCAGGAGGAGCACTTGCTAAGTCTGGACGGAGCATAGTAAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163350.8 |
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| CDS-3UTR CAA 90 bp | GCAGTCTGGACAACACACAGACAGGAAGAGAAAGATCTAGAAGCTGAGTGCAACGTAATAGTCTTTTGTTaGAAAACAAACGAGGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AVWTTHRQEEKDLEAECNVIVFC*KTNEVA Trigger: CGCCACCTCGTTTGTTTTCAAACAAAAGACTATTAC...GTTGCACTCAGCTTCTAGATCTTTCTCTTCCTGTCTGTGTGTTGTCCAGACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
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| CDS-3UTR CAA 90 bp | ATGTCCACCAGGATGAACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTCTGATTCAGCTGTCTaGGGTCCTTTAGTATCCATC | + |
|
Preference number: 5 (lower is better) Translates to: MSTRMNKKQLHMQKRLHPSDSAV*GPLVSI Trigger: GATGGATACTAAAGGACCCAAGACAGCTGAATCAGA...AGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTGGTGGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
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| CDS-3UTR CAA 90 bp | GCAGTCTGGACAACACACAGACAGGAAGAGAAAGATCTAGAAGCTGAGTGCAACATGTCTGACTTCACATaGTTCTTTTCTTCTGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AVWTTHRQEEKDLEAECNMSDFT*FFSSVL Trigger: GAGGACAGAAGAAAAGAACAATGTGAAGTCAGACAT...GTTGCACTCAGCTTCTAGATCTTTCTCTTCCTGTCTGTGTGTTGTCCAGACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
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| CDS CCA 90 bp | TCCACTGCACTTACAGTTGCTTCTGGCCTGCCCATCTCCTACTGTTaGCTTTGTATTTGCAAGTTTTATAGGTGTAAGAAACTGCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: STALTVASGLPISYC*LCICKFYRCKKLLI Trigger: AATCAGCAGTTTCTTACACCTATAAAACTTGCAAATACAAAGCCAACAGTAGGAGATGGGCAGGCCAGAAGCAACTGTAAGTGCAGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022470.15 ENSMUST00000163350.8 ENSMUST00000164137.8 ENSMUST00000171279.2 |
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| CDS-3UTR CAA 90 bp | CAGGATGAACAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACACGCCATCAGCTTCTCTaGCTTGGCAACTTGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QDEQETTAYAEETASLITRHQLL*LGNLKV Trigger: AACTTTCAAGTTGCCAAGCAAGAGAAGCTGATGGCG...TGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTGTTCATCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
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| CDS-3UTR CAA 90 bp | ACAGTCACTTCACTTCTCATCACATACACAATACAGAGATTATATACGGACACAGAGTTTCCAGATGGCTaGGCATTTAAGTCACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TVTSLLITYTIQRLYTDTEFPDG*AFKSLV Trigger: GACCAGTGACTTAAATGCCAAGCCATCTGGAAACTC...TGTGTCCGTATATAATCTCTGTATTGTGTATGTGATGAGAAGTGAAGTGACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR CAA 90 bp | CAAGAAACAACTGCATATGCAGAAGAGACTGCATCCTTGATTACAAATGTGGATGTTTCAGGAGTGGTATaGGCTGGGTGCAAATATTTG | + |
|
Preference number: 5 (lower is better) Translates to: QETTAYAEETASLITNVDVSGVV*AGCKYL Trigger: CAAATATTTGCACCCAGCCAATACCACTCCTGAAAC...ATCCACATTTGTAATCAAGGATGCAGTCTCTTCTGCATATGCAGTTGTTTCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022470.15 ENSMUST00000170840.9 |
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| CDS-3UTR CAA 90 bp | ACAGTCACTTCACTTCTCATCACATACACAATACAGAGATTATATACGGACACAAGTTGTCTACATCCATaGGTGACTCAGGCTCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: TVTSLLITYTIQRLYTDTSCLHP*VTQAHF Trigger: AAAGTGAGCCTGAGTCACCAATGGATGTAGACAACT...TGTGTCCGTATATAATCTCTGTATTGTGTATGTGATGAGAAGTGAAGTGACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164137.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGACTGCATCCTTGATTACAAATGTGGATTATATACACACTTAGATCAGAGTTGTCTACATCCATaGGTGACTCAGGCTCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: RRDCILDYKCGLYTHLDQSCLHP*VTQAHF Trigger: AAAGTGAGCCTGAGTCACCAATGGATGTAGACAACT...CTGATCTAAGTGTGTATATAATCCACATTTGTAATCAAGGATGCAGTCTCTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022470.15 |
||
| CDS GCA 72 bp | TCCTGCTCTCAGAAGGTCTACCAAACGAGGTGGCGTTaGCTCTGTGCGGTCCCGCCCGCCCCGAGACGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SCSQKVYQTRWR*LCAVPPAPRRR Trigger: CCTGCGTCTCGGGGCGGGCGGGACCGCACAGAGGCAACGCCACCTCGTTTGGTAGACCTTCTGAGAGCAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170129.8 |
||
| CDS TCA 72 bp | AAAGGACTCTCTGGTAGCACATCCACCTCCTCCTGTTaGCAGCCTGTACAGTCTTTCACAGACTGGCGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: KGLSGSTSTSSC*QPVQSFTDWRD Trigger: ATCTCGCCAGTCTGTGAAAGACTGTACAGGCTGTCAACAGGAGGAGGTGGATGTGCTACCAGAGAGTCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022470.15 ENSMUST00000163350.8 ENSMUST00000164137.8 ENSMUST00000171279.2 |
||
| CDS CCA 72 bp | CAGACTGGCGAGATCCACTGCACTTACAGTTGCTTCTaGCCTGCCCATCTCCTACTGTTGGCTTTGTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: QTGEIHCTYSCF*PAHLLLLALYL Trigger: CAAATACAAAGCCAACAGTAGGAGATGGGCAGGCCAGAAGCAACTGTAAGTGCAGTGGATCTCGCCAGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022470.15 ENSMUST00000163350.8 ENSMUST00000164137.8 ENSMUST00000171279.2 |
||
| CDS CAA 72 bp | GGGTCCTTTAGTATCCATCCAAGTAGTAATAGTCTTTaGTTTGAAAACAAACGAGGTGGCGTTGCCTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSFSIHPSSNSL*FENKRGGVASV Trigger: CACAGAGGCAACGCCACCTCGTTTGTTTTCAAACAAAAGACTATTACTACTTGGATGGATACTAAAGGACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000163350.8 ENSMUST00000164137.8 |
||
| CDS CAA 72 bp | CACTCTACATTAAGGCTAGAAGAGTTTCCAGATGGCTaGGCATTTAAGTCACTGGTCCCAGCATTATTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HSTLRLEEFPDG*AFKSLVPALFS Trigger: AGAAAATAATGCTGGGACCAGTGACTTAAATGCCAAGCCATCTGGAAACTCTTCTAGCCTTAATGTAGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000163350.8 ENSMUST00000164137.8 |
||
| CDS CAA 72 bp | GTATTGTTGTTTTCTTTACTTTCTGATTCAGCTGTCTaGGGTCCTTTAGTATCCATCCAAGTAGTAATAGTC | + |
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Preference number: 6 (lower is better) Translates to: VLLFSLLSDSAV*GPLVSIQVVIV Trigger: GACTATTACTACTTGGATGGATACTAAAGGACCCAAGACAGCTGAATCAGAAAGTAAAGAAAACAACAATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022470.15 ENSMUST00000163350.8 ENSMUST00000164137.8 |
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