Pregenerated sensors for PARD6G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056214Ensembl transcript IDs: ENSMUST00000070219.9
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCTTTCTGAGCTGGTTGTAAACAGTGTGGAAACAGACTCTCTGTaGTGGAGCCCAGCCATTGCTCTGTCACAGCCACACGGGGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: GLSELVVNSVETDSL*WSPAIALSQPHGVS Trigger: ACTGACCCCGTGTGGCTGTGACAGAGCAATGGCTGGGCTCCATCACAGAGAGTCTGTTTCCACACTGTTTACAACCAGCTCAGAAAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR CCA 90 bp | TCTGCGTCTTACCAGCAGGTGGCACTAGACCATAAGGGCAGCAGCTaGGGCACTCGACCTGGAAGACGAAGATGCTTTAAAACCTTTATT | + |
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Preference number: 1 (lower is better) Translates to: SASYQQVALDHKGSS*GTRPGRRRCFKTFI Trigger: AATAAAGGTTTTAAAGCATCTTCGTCTTCCAGGTCGAGTGCCCCAGCTGCTGCCCTTATGGTCTAGTGCCACCTGCTGGTAAGACGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR GCA 90 bp | AAACAGGCACAGGGCAAGGAAACGATCCTTAACCAAGGCCACCTCTaGCCAGGAAACAGTTCCCCAAAGGAAGGAACAACACTATTTGAC | + |
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Preference number: 1 (lower is better) Translates to: KQAQGKETILNQGHL*PGNSSPKEGTTLFD Trigger: GTCAAATAGTGTTGTTCCTTCCTTTGGGGAACTGTTTCCTGGGCAGAGGTGGCCTTGGTTAAGGATCGTTTCCTTGCCCTGTGCCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR GCA 90 bp | GACCATAAGGGCAGCAGCTGGGGCACTCGACCTGGAAGACGAAGATaGTTTAAAACCTTTATTTACATGAAGGAGTCACTTGGTCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: DHKGSSWGTRPGRRR*FKTFIYMKESLGQF Trigger: AAACTGACCAAGTGACTCCTTCATGTAAATAAAGGTTTTAAAGCATCTTCGTCTTCCAGGTCGAGTGCCCCAGCTGCTGCCCTTATGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR GCA 90 bp | ACACTATTTGACAGTATGAGTTCTGGACAAAGGCCAATGCTGAGATaGATTCTCCATCTGGCATTCATGAAGTCAGGACAGTTCTGCGTC | + |
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Preference number: 1 (lower is better) Translates to: TLFDSMSSGQRPMLR*ILHLAFMKSGQFCV Trigger: GACGCAGAACTGTCCTGACTTCATGAATGCCAGATGGAGAATGCATCTCAGCATTGGCCTTTGTCCAGAACTCATACTGTCAAATAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR TCA 90 bp | CACTTTTGTGTTGTGTTTCACTCCACAAAGGTTCTGGACAGGCACTaGGGCCTGGCCCAGATAATTTGCAGTTGTGCATATTTTAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: HFCVVFHSTKVLDRH*GLAQIICSCAYFKF Trigger: AAACTTAAAATATGCACAACTGCAAATTATCTGGGCCAGGCCTCAGTGCCTGTCCAGAACCTTTGTGGAGTGAAACACAACACAAAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR CCA 90 bp | ACTATATATCTAACAGTACTACATGCTATTAATATTTGCCACTCATaGGTCTTGGTAACACACAGTCTGTCTGGGACTCTAGCCTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: TIYLTVLHAINICHS*VLVTHSLSGTLACP Trigger: TGGGCAGGCTAGAGTCCCAGACAGACTGTGTGTTACCAAGACCCATGAGTGGCAAATATTAATAGCATGTAGTACTGTTAGATATATAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR CCA 90 bp | TTACATGAAGGAGTCACTTGGTCAGTTTGTCCTCAGTTAATCAATTaGATATTCTCTCCCAACACTGTATCCAAACAGAAGGCGCAATTC | + |
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Preference number: 1 (lower is better) Translates to: LHEGVTWSVCPQLIN*IFSPNTVSKQKAQF Trigger: GAATTGCGCCTTCTGTTTGGATACAGTGTTGGGAGAGAATATCCAATTGATTAACTGAGGACAAACTGACCAAGTGACTCCTTCATGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR TCA 90 bp | GCACTCGACCTGGAAGACGAAGATGCTTTAAAACCTTTATTTACATaGAGGAGTCACTTGGTCAGTTTGTCCTCAGTTAATCAATTGGAT | + |
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Preference number: 1 (lower is better) Translates to: ALDLEDEDALKPLFT*RSHLVSLSSVNQLD Trigger: ATCCAATTGATTAACTGAGGACAAACTGACCAAGTGACTCCTTCATGTAAATAAAGGTTTTAAAGCATCTTCGTCTTCCAGGTCGAGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR GCA 90 bp | TTTGGAGTCACTATATATCTAACAGTACTACATGCTATTAATATTTaGCACTCATGGGTCTTGGTAACACACAGTCTGTCTGGGACTCTA | + |
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Preference number: 1 (lower is better) Translates to: FGVTIYLTVLHAINI*HSWVLVTHSLSGTL Trigger: TAGAGTCCCAGACAGACTGTGTGTTACCAAGACCCATGAGTGGCAAATATTAATAGCATGTAGTACTGTTAGATATATAGTGACTCCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR CAA 90 bp | GGGTGCCTGGATCCTCACCGAGGCCCGGGGAGTATCTTGCTCTCCTaGTGTGGACACTCCGCACATAACGGAGAAACAGGCACAGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: GCLDPHRGPGSILLS*CGHSAHNGETGTGQ Trigger: TTGCCCTGTGCCTGTTTCTCCGTTATGTGCGGAGTGTCCACACAAGGAGAGCAAGATACTCCCCGGGCCTCGGTGAGGATCCAGGCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCCACGGATCGCTATTCTAGGAACAGGCACTGACATGCTCGAATCTCCTCTTACAGCAGTGACCGCCTaGCTGTCACGGCTGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LPRIAILGTGTDMLESPLTAVTA*LSRLGQ Trigger: CTGCCCCAGCCGTGACAGTCAGGCGGTCACTGCTGT...AAGAGGAGATTCGAGCATGTCAGTGCCTGTTCCTAGAATAGCGATCCGTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR-3UTR GCA 90 bp | AGTTTAGAAGCCATGAGTCTGGGTGCCTGGATCCTCACCGAGGCCCGGGGAGTAAACCAAGGCCACCTCTaGCCAGGAAACAGTTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SLEAMSLGAWILTEARGVNQGHL*PGNSSP Trigger: TGGGGAACTGTTTCCTGGGCAGAGGTGGCCTTGGTT...TACTCCCCGGGCCTCGGTGAGGATCCAGGCACCCAGACTCATGGCTTCTAAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTTAGAAGCCATGAGTCTGGGTGCCTGGATCCTCACCGAGGCCCGGGGAGTAGAAAGCGCTTCTCTTTaGAGTCACTATATATCTAAC | + |
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Preference number: 2 (lower is better) Translates to: SLEAMSLGAWILTEARGVESASL*SHYISN Trigger: GTTAGATATATAGTGACTCCAAAGAGAAGCGCTTTC...TACTCCCCGGGCCTCGGTGAGGATCCAGGCACCCAGACTCATGGCTTCTAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTTAGAAGCCATGAGTCTGGGTGCCTGGATCCTCACCGAGGCCCGGGGAGTACCTCAGTTAATCAATTaGATATTCTCTCCCAACACT | + |
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Preference number: 2 (lower is better) Translates to: SLEAMSLGAWILTEARGVPQLIN*IFSPNT Trigger: AGTGTTGGGAGAGAATATCCAATTGATTAACTGAGG...TACTCCCCGGGCCTCGGTGAGGATCCAGGCACCCAGACTCATGGCTTCTAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR CAA 90 bp | TATCTAACAGTACTACATGCTATTAATATTTGCCACTCATGGGTCTaGGTAACACACAGTCTGTCTGGGACTCTAGCCTGCCCAAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: YLTVLHAINICHSWV*VTHSLSGTLACPSG Trigger: GCCACTTGGGCAGGCTAGAGTCCCAGACAGACTGTGTGTTACCAAGACCCATGAGTGGCAAATATTAATAGCATGTAGTACTGTTAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR-3UTR CCA 90 bp | GTAATATTTGTCTTAGTAAAGCACATTCCAGATCACTGCAGCAACATGGAAACAAACACACAGTCTGTCTaGGACTCTAGCCTGCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: VIFVLVKHIPDHCSNMETNTQSV*DSSLPK Trigger: CTTGGGCAGGCTAGAGTCCCAGACAGACTGTGTGTT...TGTTTCCATGTTGCTGCAGTGATCTGGAATGTGCTTTACTAAGACAAATATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR-3UTR TCA 90 bp | GTAATATTTGTCTTAGTAAAGCACATTCCAGATCACTGCAGCAACATGGAAACAGACAAAGGCCAATGCTaGGATGCATTCTCCATCTGG | + |
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Preference number: 2 (lower is better) Translates to: VIFVLVKHIPDHCSNMETDKGQC*DAFSIW Trigger: CCAGATGGAGAATGCATCTCAGCATTGGCCTTTGTC...TGTTTCCATGTTGCTGCAGTGATCTGGAATGTGCTTTACTAAGACAAATATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR-3UTR TCA 90 bp | CATTCCAGATCACTGCAGCAACATGGAAACAAAACAGTTGCTTTTAGCAGTTTAGAGACTCATTTCTACTaGAGATGCCTTAAAACCGCC | + |
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Preference number: 2 (lower is better) Translates to: HSRSLQQHGNKTVAFSSLETHFY*RCLKTA Trigger: GGCGGTTTTAAGGCATCTTCAGTAGAAATGAGTCTC...TAAACTGCTAAAAGCAACTGTTTTGTTTCCATGTTGCTGCAGTGATCTGGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR-3UTR TCA 90 bp | CATTCCAGATCACTGCAGCAACATGGAAACAAAACAGTTGCTTTTAGCAGTTTAAAACCTTTATTTACATaGAGGAGTCACTTGGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: HSRSLQQHGNKTVAFSSLKPLFT*RSHLVS Trigger: ACTGACCAAGTGACTCCTTCATGTAAATAAAGGTTT...TAAACTGCTAAAAGCAACTGTTTTGTTTCCATGTTGCTGCAGTGATCTGGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR-3UTR GCA 90 bp | CATTCCAGATCACTGCAGCAACATGGAAACAAAACAGTTGCTTTTAGCAGTTTACATGCTATTAATATTTaGCACTCATGGGTCTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: HSRSLQQHGNKTVAFSSLHAINI*HSWVLV Trigger: TACCAAGACCCATGAGTGGCAAATATTAATAGCATG...TAAACTGCTAAAAGCAACTGTTTTGTTTCCATGTTGCTGCAGTGATCTGGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR-3UTR GCA 90 bp | GTAATATTTGTCTTAGTAAAGCACATTCCAGATCACTGCAGCAACATGGAAACACTGGCCCAGATAATTTaGAGTTGTGCATATTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: VIFVLVKHIPDHCSNMETLAQII*SCAYFK Trigger: CTTAAAATATGCACAACTGCAAATTATCTGGGCCAG...TGTTTCCATGTTGCTGCAGTGATCTGGAATGTGCTTTACTAAGACAAATATTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR-3UTR GCA 90 bp | CATTCCAGATCACTGCAGCAACATGGAAACAAAACAGTTGCTTTTAGCAGTTTACCTGGAAGACGAAGATaGTTTAAAACCTTTATTTAC | + |
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Preference number: 2 (lower is better) Translates to: HSRSLQQHGNKTVAFSSLPGRRR*FKTFIY Trigger: GTAAATAAAGGTTTTAAAGCATCTTCGTCTTCCAGG...TAAACTGCTAAAAGCAACTGTTTTGTTTCCATGTTGCTGCAGTGATCTGGAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR TCA 72 bp | CTAAATCCACTGGAGCCGCCGACAGCAGTGACCGCCTaGCTGTCACGGCTGGGGCAGCTCCGCAGATGCAGG | + |
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Preference number: 3 (lower is better) Translates to: LNPLEPPTAVTA*LSRLGQLRRCR Trigger: CCTGCATCTGCGGAGCTGCCCCAGCCGTGACAGTCAGGCGGTCACTGCTGTCGGCGGCTCCAGTGGATTTAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR GCA 72 bp | GTGCTACCACTGGCCTCACCTTCTAGCCAGCAGAGTTaGTGGGCTCCTAAATCCACTGGAGCCGCCGACAGC | + |
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Preference number: 3 (lower is better) Translates to: VLPLASPSSQQS*WAPKSTGAADS Trigger: GCTGTCGGCGGCTCCAGTGGATTTAGGAGCCCAGCAACTCTGCTGGCTAGAAGGTGAGGCCAGTGGTAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR GCA 72 bp | GGTGCCTGGATCCTCACCGAGGCCCGGGGAGTATCTTaGTCTCCTTGTGTGGACACTCCGCACATAACGGAG | + |
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Preference number: 3 (lower is better) Translates to: GAWILTEARGVS*SPCVDTPHITE Trigger: CTCCGTTATGTGCGGAGTGTCCACACAAGGAGAGCAAGATACTCCCCGGGCCTCGGTGAGGATCCAGGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR CCA 72 bp | CTACCACTGGCCTCACCTTCTAGCCAGCAGAGTTGCTaGGCTCCTAAATCCACTGGAGCCGCCGACAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: LPLASPSSQQSC*APKSTGAADSS Trigger: ACTGCTGTCGGCGGCTCCAGTGGATTTAGGAGCCCAGCAACTCTGCTGGCTAGAAGGTGAGGCCAGTGGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR TCA 72 bp | GCTGCGGGCCTTCAGAGGTACGAGACTCATTTCTACTaGAGATGCCTTAAAACCGCCCTAGTCAGCCAACCC | + |
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Preference number: 3 (lower is better) Translates to: AAGLQRYETHFY*RCLKTALVSQP Trigger: GGGTTGGCTGACTAGGGCGGTTTTAAGGCATCTTCAGTAGAAATGAGTCTCGTACCTCTGAAGGCCCGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR CCA 72 bp | TACCAGCAGGTGGCACTAGACCATAAGGGCAGCAGCTaGGGCACTCGACCTGGAAGACGAAGATGCTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: YQQVALDHKGSS*GTRPGRRRCFK Trigger: TTTAAAGCATCTTCGTCTTCCAGGTCGAGTGCCCCAGCTGCTGCCCTTATGGTCTAGTGCCACCTGCTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR TCA 72 bp | GAGCTGGTTGTAAACAGTGTGGAAACAGACTCTCTGTaGTGGAGCCCAGCCATTGCTCTGTCACAGCCACAC | + |
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Preference number: 3 (lower is better) Translates to: ELVVNSVETDSL*WSPAIALSQPH Trigger: GTGTGGCTGTGACAGAGCAATGGCTGGGCTCCATCACAGAGAGTCTGTTTCCACACTGTTTACAACCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR GCA 72 bp | GAAACACGGATGGAACAGTTGGCTTTTAATCCCACGTaGTACCACTGGCCTCACCTTCTAGCCAGCAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: ETRMEQLAFNPT*YHWPHLLASRV Trigger: AACTCTGCTGGCTAGAAGGTGAGGCCAGTGGTAGCACGTGGGATTAAAAGCCAACTGTTCCATCCGTGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR-3UTR CAA 90 bp | CTGCCACGGATCGCTATTCTAGGAACAGGCACTGACATGCTCGAATCTCCTCTTATACTCTCTGCACTTTaGTGTTGTGTTTCACTCCAC | + |
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Preference number: 3 (lower is better) Translates to: LPRIAILGTGTDMLESPLILSAL*CCVSLH Trigger: GTGGAGTGAAACACAACACAAAAGTGCAGAGAGTAT...AAGAGGAGATTCGAGCATGTCAGTGCCTGTTCCTAGAATAGCGATCCGTGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR GCA 72 bp | GACAGTATGAGTTCTGGACAAAGGCCAATGCTGAGATaGATTCTCCATCTGGCATTCATGAAGTCAGGACAG | + |
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Preference number: 3 (lower is better) Translates to: DSMSSGQRPMLR*ILHLAFMKSGQ Trigger: CTGTCCTGACTTCATGAATGCCAGATGGAGAATGCATCTCAGCATTGGCCTTTGTCCAGAACTCATACTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR CCA 72 bp | CTAACAGTACTACATGCTATTAATATTTGCCACTCATaGGTCTTGGTAACACACAGTCTGTCTGGGACTCTA | + |
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Preference number: 3 (lower is better) Translates to: LTVLHAINICHS*VLVTHSLSGTL Trigger: TAGAGTCCCAGACAGACTGTGTGTTACCAAGACCCATGAGTGGCAAATATTAATAGCATGTAGTACTGTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR CCA 72 bp | GGAGTCACTTGGTCAGTTTGTCCTCAGTTAATCAATTaGATATTCTCTCCCAACACTGTATCCAAACAGAAG | + |
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Preference number: 3 (lower is better) Translates to: GVTWSVCPQLIN*IFSPNTVSKQK Trigger: CTTCTGTTTGGATACAGTGTTGGGAGAGAATATCCAATTGATTAACTGAGGACAAACTGACCAAGTGACTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR-3UTR CAA 90 bp | CGACCTGGAAGACGAAGATGCTTTAAAACCTTTATTTACATGAAGGAGTCACTTCTCTGCACTTTTGTGTaGTGTTTCACTCCACAAAGG | + |
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Preference number: 3 (lower is better) Translates to: RPGRRRCFKTFIYMKESLLCTFV*CFTPQR Trigger: CCTTTGTGGAGTGAAACACAACACAAAAGTGCAGAG...AAGTGACTCCTTCATGTAAATAAAGGTTTTAAAGCATCTTCGTCTTCCAGGTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR GCA 72 bp | ACTATATATCTAACAGTACTACATGCTATTAATATTTaGCACTCATGGGTCTTGGTAACACACAGTCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: TIYLTVLHAINI*HSWVLVTHSLS Trigger: AGACAGACTGTGTGTTACCAAGACCCATGAGTGGCAAATATTAATAGCATGTAGTACTGTTAGATATATAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR GCA 90 bp | AGTTTAGAAGCCATGAGTCTGGGTGCCTGGATCCTCACCGAGGCCCGGGGAGTACGTGAGCAAGGCTGGTaGCATTGGCCCTGGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: SLEAMSLGAWILTEARGVREQGW*HWPWRG Trigger: GCCTCTCCAGGGCCAATGGCACCAGCCTTGCTCACG...TACTCCCCGGGCCTCGGTGAGGATCCAGGCACCCAGACTCATGGCTTCTAAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CCA 90 bp | AGTTTAGAAGCCATGAGTCTGGGTGCCTGGATCCTCACCGAGGCCCGGGGAGTATCCTCCACCCCTCCTTaGGGGAGGACCAGGCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SLEAMSLGAWILTEARGVSSTPP*GRTRLC Trigger: ACACAGCCTGGTCCTCCCCCAAGGAGGGGTGGAGGA...TACTCCCCGGGCCTCGGTGAGGATCCAGGCACCCAGACTCATGGCTTCTAAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR TCA 90 bp | AGTTTAGAAGCCATGAGTCTGGGTGCCTGGATCCTCACCGAGGCCCGGGGAGTAAGTTGTCGTCATTGTTaGTGGGCAGCAGGTCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: SLEAMSLGAWILTEARGVSCRHC*WAAGPR Trigger: ACGGGGACCTGCTGCCCATCAACAATGACGACAACT...TACTCCCCGGGCCTCGGTGAGGATCCAGGCACCCAGACTCATGGCTTCTAAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR GCA 90 bp | AGTTTAGAAGCCATGAGTCTGGGTGCCTGGATCCTCACCGAGGCCCGGGGAGTAACGTCCTCAGAATTCTaGAGGACATGGGCACCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SLEAMSLGAWILTEARGVTSSEF*RTWAPG Trigger: GCCAGGTGCCCATGTCCTGCAGAATTCTGAGGACGT...TACTCCCCGGGCCTCGGTGAGGATCCAGGCACCCAGACTCATGGCTTCTAAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CCA 90 bp | AGTTTAGAAGCCATGAGTCTGGGTGCCTGGATCCTCACCGAGGCCCGGGGAGTAGCAGGCTGTGGTGACTaGTGGTGCTGTCTGTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: SLEAMSLGAWILTEARGVAGCGD*WCCLWN Trigger: ATTCCACAGACAGCACCACCAGTCACCACAGCCTGC...TACTCCCCGGGCCTCGGTGAGGATCCAGGCACCCAGACTCATGGCTTCTAAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR CAA 72 bp | GATCCTCACCGAGGCCCGGGGAGTATCTTGCTCTCCTaGTGTGGACACTCCGCACATAACGGAGAAACAGGC | + |
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Preference number: 4 (lower is better) Translates to: DPHRGPGSILLS*CGHSAHNGETG Trigger: GCCTGTTTCTCCGTTATGTGCGGAGTGTCCACACAAGGAGAGCAAGATACTCCCCGGGCCTCGGTGAGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR CAA 72 bp | GTGTGGAAACAGACTCTCTGTGATGGAGCCCAGCCATaGCTCTGTCACAGCCACACGGGGTCAGTGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: VWKQTLCDGAQP*LCHSHTGSVEH Trigger: GTGTTCCACTGACCCCGTGTGGCTGTGACAGAGCAATGGCTGGGCTCCATCACAGAGAGTCTGTTTCCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR TCA 90 bp | CTGCCACGGATCGCTATTCTAGGAACAGGCACTGACATGCTCGAATCTCCTCTTCTTCTGTGCAGCCCGTaGGCAAGGCTGGTGCCATTG | + |
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Preference number: 4 (lower is better) Translates to: LPRIAILGTGTDMLESPLLLCSP*ARLVPL Trigger: CAATGGCACCAGCCTTGCTCACGGGCTGCACAGAAG...AAGAGGAGATTCGAGCATGTCAGTGCCTGTTCCTAGAATAGCGATCCGTGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR GCA 90 bp | TCACTCCACAAAGGTTCTGGACAGGCACTGAGGCCTGGCCCAGATAATTTGCAGGTGCTGTCTGTGGAATaGACAGAGCTGCCGGACGTG | + |
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Preference number: 4 (lower is better) Translates to: SLHKGSGQALRPGPDNLQVLSVE*TELPDV Trigger: CACGTCCGGCAGCTCTGTGCATTCCACAGACAGCAC...CTGCAAATTATCTGGGCCAGGCCTCAGTGCCTGTCCAGAACCTTTGTGGAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR GCA 90 bp | TCACTCCACAAAGGTTCTGGACAGGCACTGAGGCCTGGCCCAGATAATTTGCAGGAAATCTGTGGATGCTaGCGTTGCTCTCCCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLHKGSGQALRPGPDNLQEICGC*RCSPSQ Trigger: CTGGGAGGGAGAGCAACGGCAGCATCCACAGATTTC...CTGCAAATTATCTGGGCCAGGCCTCAGTGCCTGTCCAGAACCTTTGTGGAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CCA 90 bp | TCACTCCACAAAGGTTCTGGACAGGCACTGAGGCCTGGCCCAGATAATTTGCAGTCGGTGTTAGAGATGTaGTGGGTGTGCACCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: SLHKGSGQALRPGPDNLQSVLEM*WVCTTS Trigger: GCTGGTGGTGCACACCCACCACATCTCTAACACCGA...CTGCAAATTATCTGGGCCAGGCCTCAGTGCCTGTCCAGAACCTTTGTGGAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CCA 90 bp | TCACTCCACAAAGGTTCTGGACAGGCACTGAGGCCTGGCCCAGATAATTTGCAGGCTGTGTCGGGGGTCTaGCTTCAGAGAGCTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLHKGSGQALRPGPDNLQAVSGV*LQRAEK Trigger: TTTCTCAGCTCTCTGAAGCCAGACCCCCGACACAGC...CTGCAAATTATCTGGGCCAGGCCTCAGTGCCTGTCCAGAACCTTTGTGGAGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR TCA 90 bp | CTGCCACGGATCGCTATTCTAGGAACAGGCACTGACATGCTCGAATCTCCTCTTCGCCAAACTTGCTCTTaGCTTCCACAGCGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPRIAILGTGTDMLESPLRQTCS*LPQRCS Trigger: ACTGCAGCGCTGTGGAAGTCAAGAGCAAGTTTGGCG...AAGAGGAGATTCGAGCATGTCAGTGCCTGTTCCTAGAATAGCGATCCGTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR TCA 90 bp | TCACTCCACAAAGGTTCTGGACAGGCACTGAGGCCTGGCCCAGATAATTTGCAGCTGGCTTCAGAGAGCTaGGAAATCTGTGGATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLHKGSGQALRPGPDNLQLASES*EICGCC Trigger: GCAGCATCCACAGATTTCTCAGCTCTCTGAAGCCAG...CTGCAAATTATCTGGGCCAGGCCTCAGTGCCTGTCCAGAACCTTTGTGGAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CCA 90 bp | TCACTCCACAAAGGTTCTGGACAGGCACTGAGGCCTGGCCCAGATAATTTGCAGAACTTCCCAGGCTTGTaGCGGTCCAAGGAGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLHKGSGQALRPGPDNLQNFPGL*RSKENL Trigger: AAGGTTCTCCTTGGACCGCCACAAGCCTGGGAAGTT...CTGCAAATTATCTGGGCCAGGCCTCAGTGCCTGTCCAGAACCTTTGTGGAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CCA 90 bp | CTGCCACGGATCGCTATTCTAGGAACAGGCACTGACATGCTCGAATCTCCTCTTGTGTTAGAGATGTGGTaGGTGTGCACCACCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRIAILGTGTDMLESPLVLEMW*VCTTSW Trigger: CCAGCTGGTGGTGCACACCCACCACATCTCTAACAC...AAGAGGAGATTCGAGCATGTCAGTGCCTGTTCCTAGAATAGCGATCCGTGGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CCA 90 bp | CTGCCACGGATCGCTATTCTAGGAACAGGCACTGACATGCTCGAATCTCCTCTTGAGCTGAGAAATCTGTaGATGCTGCCGTTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPRIAILGTGTDMLESPLELRNL*MLPLLS Trigger: GGAGAGCAACGGCAGCATCCACAGATTTCTCAGCTC...AAGAGGAGATTCGAGCATGTCAGTGCCTGTTCCTAGAATAGCGATCCGTGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CCA 90 bp | TCACTCCACAAAGGTTCTGGACAGGCACTGAGGCCTGGCCCAGATAATTTGCAGGTGACAATGAGGTTGTaGCTGTTGGCTATCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: SLHKGSGQALRPGPDNLQVTMRL*LLAIIM Trigger: CATGATGATAGCCAACAGCCACAACCTCATTGTCAC...CTGCAAATTATCTGGGCCAGGCCTCAGTGCCTGTCCAGAACCTTTGTGGAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CCA 90 bp | GTACTACATGCTATTAATATTTGCCACTCATGGGTCTTGGTAACACACAGTCTGCAAGGCTGGTGCCATTaGCCCTGGAGAGGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLHAINICHSWVLVTHSLQGWCH*PWRGCL Trigger: CAGGCAGCCTCTCCAGGGCCAATGGCACCAGCCTTG...CAGACTGTGTGTTACCAAGACCCATGAGTGGCAAATATTAATAGCATGTAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR GCA 90 bp | CTGCCACGGATCGCTATTCTAGGAACAGGCACTGACATGCTCGAATCTCCTCTTCACTTGAGACTGCCTTaGAGAAGTTGTCGTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPRIAILGTGTDMLESPLHLRLP*RSCRHC Trigger: ACAATGACGACAACTTCTGCAAGGCAGTCTCAAGTG...AAGAGGAGATTCGAGCATGTCAGTGCCTGTTCCTAGAATAGCGATCCGTGGCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
||
| CDS-3UTR CCA 90 bp | GTACTACATGCTATTAATATTTGCCACTCATGGGTCTTGGTAACACACAGTCTGTGGTGCCATTGGCCCTaGAGAGGCTGCCTGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLHAINICHSWVLVTHSLWCHWP*RGCLEV Trigger: TACCTCCAGGCAGCCTCTCCAGGGCCAATGGCACCA...CAGACTGTGTGTTACCAAGACCCATGAGTGGCAAATATTAATAGCATGTAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CCA 90 bp | CGACCTGGAAGACGAAGATGCTTTAAAACCTTTATTTACATGAAGGAGTCACTTCCTGGAGAGGCTGCCTaGAGGTACAGCCTGCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPGRRRCFKTFIYMKESLPGEAA*RYSLRL Trigger: AAGACGCAGGCTGTACCTCCAGGCAGCCTCTCCAGG...AAGTGACTCCTTCATGTAAATAAAGGTTTTAAAGCATCTTCGTCTTCCAGGTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR GCA 90 bp | GTACTACATGCTATTAATATTTGCCACTCATGGGTCTTGGTAACACACAGTCTGTGTGGTGACTGGTGGTaGTGTCTGTGGAATGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VLHAINICHSWVLVTHSLCGDWW*CLWNAQ Trigger: CTGTGCATTCCACAGACAGCACCACCAGTCACCACA...CAGACTGTGTGTTACCAAGACCCATGAGTGGCAAATATTAATAGCATGTAGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR CAA 72 bp | GTACTACATGCTATTAATATTTGCCACTCATGGGTCTaGGTAACACACAGTCTGTCTGGGACTCTAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLHAINICHSWV*VTHSLSGTLAC Trigger: GCAGGCTAGAGTCCCAGACAGACTGTGTGTTACCAAGACCCATGAGTGGCAAATATTAATAGCATGTAGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR TCA 90 bp | GTACTACATGCTATTAATATTTGCCACTCATGGGTCTTGGTAACACACAGTCTGGTCTTGGGAATGTGTTaGGGTTCTAGAGCCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLHAINICHSWVLVTHSLVLGMC*GSRAPS Trigger: TGAAGGGGCTCTAGAACCTCAACACATTCCCAAGAC...CAGACTGTGTGTTACCAAGACCCATGAGTGGCAAATATTAATAGCATGTAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CCA 90 bp | GTACTACATGCTATTAATATTTGCCACTCATGGGTCTTGGTAACACACAGTCTGGTACAGCCTGCGTCTTaGGAATGTGTTGAGGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VLHAINICHSWVLVTHSLVQPAS*ECVEVL Trigger: TAGAACCTCAACACATTCCCAAGACGCAGGCTGTAC...CAGACTGTGTGTTACCAAGACCCATGAGTGGCAAATATTAATAGCATGTAGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR GCA 90 bp | GTACTACATGCTATTAATATTTGCCACTCATGGGTCTTGGTAACACACAGTCTGGAAGCTGTAATGGTCTaGTTCTTCTCGTTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLHAINICHSWVLVTHSLEAVMV*FFSFLD Trigger: ATCCAGAAACGAGAAGAAGCAGACCATTACAGCTTC...CAGACTGTGTGTTACCAAGACCCATGAGTGGCAAATATTAATAGCATGTAGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CCA 90 bp | GTAATATTTGTCTTAGTAAAGCACATTCCAGATCACTGCAGCAACATGGAAACAAATGTAGAAGCCCAGTaGCTTCTCATAACCGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VIFVLVKHIPDHCSNMETNVEAQ*LLITVS Trigger: AGACACGGTTATGAGAAGCCACTGGGCTTCTACATT...TGTTTCCATGTTGCTGCAGTGATCTGGAATGTGCTTTACTAAGACAAATATTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| 3UTR CAA 72 bp | AGGAGTCACTTGGTCAGTTTGTCCTCAGTTAATCAATaGGATATTCTCTCCCAACACTGTATCCAAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSHLVSLSSVNQ*DILSQHCIQTE Trigger: TTCTGTTTGGATACAGTGTTGGGAGAGAATATCCAATTGATTAACTGAGGACAAACTGACCAAGTGACTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CCA 90 bp | GGACATGGGCACCTGGCAGGCTGTGGTGACTGGTGGTGCTGTCTGTaGAATGCACAGAGCTGCCGGACGTGCGGCTGCTGCGGACCACAT | + |
|
Preference number: 5 (lower is better) Translates to: GHGHLAGCGDWWCCL*NAQSCRTCGCCGPH Trigger: ATGTGGTCCGCAGCAGCCGCACGTCCGGCAGCTCTGTGCATTCCACAGACAGCACCACCAGTCACCACAGCCTGCCAGGTGCCCATGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS TCA 90 bp | TCCCTCCCAGAGCTATGCAGGCTCATGTCCCTTCTGTGCAGCCCGTaGGCAAGGCTGGTGCCATTGGCCCTGGAGAGGCTGCCTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLPELCRLMSLLCSP*ARLVPLALERLPGG Trigger: ACCTCCAGGCAGCCTCTCCAGGGCCAATGGCACCAGCCTTGCTCACGGGCTGCACAGAAGGGACATGAGCCTGCATAGCTCTGGGAGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CCA 90 bp | GGCTCATGTCCCTTCTGTGCAGCCCGTGAGCAAGGCTGGTGCCATTaGCCCTGGAGAGGCTGCCTGGAGGTACAGCCTGCGTCTTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GSCPFCAAREQGWCH*PWRGCLEVQPASWE Trigger: TTCCCAAGACGCAGGCTGTACCTCCAGGCAGCCTCTCCAGGGCCAATGGCACCAGCCTTGCTCACGGGCTGCACAGAAGGGACATGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS GCA 90 bp | AATTCTGCAGGACATGGGCACCTGGCAGGCTGTGGTGACTGGTGGTaGTGTCTGTGGAATGCACAGAGCTGCCGGACGTGCGGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NSAGHGHLAGCGDWW*CLWNAQSCRTCGCC Trigger: GCAGCAGCCGCACGTCCGGCAGCTCTGTGCATTCCACAGACAGCACCACCAGTCACCACAGCCTGCCAGGTGCCCATGTCCTGCAGAATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CCA 90 bp | ATGGATGACACTGGGCGGAAGTCATGCGGCATGCTGATGTTGAGGTaGGGACGCCGACGCAGACCGTCATCCCTCAGGGTCACCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: MDDTGRKSCGMLMLR*GRRRRPSSLRVTST Trigger: GGTGCTGGTGACCCTGAGGGATGACGGTCTGCGTCGGCGTCCCCACCTCAACATCAGCATGCCGCATGACTTCCGCCCAGTGTCATCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CCA 90 bp | CAGAATTCTGCAGGACATGGGCACCTGGCAGGCTGTGGTGACTGGTaGTGCTGTCTGTGGAATGCACAGAGCTGCCGGACGTGCGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QNSAGHGHLAGCGDW*CCLWNAQSCRTCGC Trigger: GCAGCCGCACGTCCGGCAGCTCTGTGCATTCCACAGACAGCACCACCAGTCACCACAGCCTGCCAGGTGCCCATGTCCTGCAGAATTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS GCA 90 bp | GCAGGCTGTGGTGACTGGTGGTGCTGTCTGTGGAATGCACAGAGCTaGCGGACGTGCGGCTGCTGCGGACCACATTGTTCCTTTGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGCGDWWCCLWNAQS*RTCGCCGPHCSFGW Trigger: CCAACCAAAGGAACAATGTGGTCCGCAGCAGCCGCACGTCCGGCAGCTCTGTGCATTCCACAGACAGCACCACCAGTCACCACAGCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CCA 90 bp | TGTCCCTTCTGTGCAGCCCGTGAGCAAGGCTGGTGCCATTGGCCCTaGAGAGGCTGCCTGGAGGTACAGCCTGCGTCTTGGGAATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CPFCAAREQGWCHWP*RGCLEVQPASWECV Trigger: AACACATTCCCAAGACGCAGGCTGTACCTCCAGGCAGCCTCTCCAGGGCCAATGGCACCAGCCTTGCTCACGGGCTGCACAGAAGGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS TCA 90 bp | ACGTCCTCAGAATTCTGCAGGACATGGGCACCTGGCAGGCTGTGGTaGCTGGTGGTGCTGTCTGTGGAATGCACAGAGCTGCCGGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: TSSEFCRTWAPGRLW*LVVLSVECTELPDV Trigger: CACGTCCGGCAGCTCTGTGCATTCCACAGACAGCACCACCAGTCACCACAGCCTGCCAGGTGCCCATGTCCTGCAGAATTCTGAGGACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS GCA 90 bp | GGGAGGATGTCCACGTCAATGATGGATGACACTGGGCGGAAGTCATaGGGCATGCTGATGTTGAGGTGGGGACGCCGACGCAGACCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRMSTSMMDDTGRKS*GMLMLRWGRRRRPS Trigger: TGACGGTCTGCGTCGGCGTCCCCACCTCAACATCAGCATGCCGCATGACTTCCGCCCAGTGTCATCCATCATTGACGTGGACATCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS GCA 90 bp | TGTGCAGCCCGTGAGCAAGGCTGGTGCCATTGGCCCTGGAGAGGCTaGCTGGAGGTACAGCCTGCGTCTTGGGAATGTGTTGAGGTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: CAAREQGWCHWPWRG*LEVQPASWECVEVL Trigger: TAGAACCTCAACACATTCCCAAGACGCAGGCTGTACCTCCAGGCAGCCTCTCCAGGGCCAATGGCACCAGCCTTGCTCACGGGCTGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CCA 90 bp | ACCAGGCTGTGTCGGGGGTCTGGCTTCAGAGAGCTGAGAAATCTGTaGATGCTGCCGTTGCTCTCCCTCCCAGAGCTATGCAGGCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: TRLCRGSGFRELRNL*MLPLLSLPELCRLM Trigger: CATGAGCCTGCATAGCTCTGGGAGGGAGAGCAACGGCAGCATCCACAGATTTCTCAGCTCTCTGAAGCCAGACCCCCGACACAGCCTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CAA 90 bp | CTGCCACGGATCGCTATTCTAGGAACAGGCACTGACATGCTCGAATCTCCTCTTGCAAGGCTGGTGCCATaGGCCCTGGAGAGGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPRIAILGTGTDMLESPLARLVP*ALERLP Trigger: AGGCAGCCTCTCCAGGGCCAATGGCACCAGCCTTGC...AAGAGGAGATTCGAGCATGTCAGTGCCTGTTCCTAGAATAGCGATCCGTGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CAA 90 bp | AGTTTAGAAGCCATGAGTCTGGGTGCCTGGATCCTCACCGAGGCCCGGGGAGTACTTTGGTTGGCCGGCTaGACAGTGACAATGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLEAMSLGAWILTEARGVLWLAG*TVTMRL Trigger: CAACCTCATTGTCACTGTCAAGCCGGCCAACCAAAG...TACTCCCCGGGCCTCGGTGAGGATCCAGGCACCCAGACTCATGGCTTCTAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS TCA 90 bp | ACGCAGACCGTCATCCCTCAGGGTCACCAGCACCTTTTTCTTCCGTaGCAGAGTGCCTGCTCCGAAGCTGTAATGGTCTGCTTCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TQTVIPQGHQHLFLP*QSACSEAVMVCFFS Trigger: CGAGAAGAAGCAGACCATTACAGCTTCGGAGCAGGCACTCTGTCACGGAAGAAAAAGGTGCTGGTGACCCTGAGGGATGACGGTCTGCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS TCA 90 bp | CTGGAGAGGCTGCCTGGAGGTACAGCCTGCGTCTTGGGAATGTGTTaGGGTTCTAGAGCCCCTTCAATGACAATGTCGGCTTCCTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LERLPGGTACVLGMC*GSRAPSMTMSASSS Trigger: TGACGAGGAAGCCGACATTGTCATTGAAGGGGCTCTAGAACCTCAACACATTCCCAAGACGCAGGCTGTACCTCCAGGCAGCCTCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CAA 90 bp | AGTTTAGAAGCCATGAGTCTGGGTGCCTGGATCCTCACCGAGGCCCGGGGAGTACATCATGTCTGTGACTaGATCCAAGGTCTTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLEAMSLGAWILTEARGVHHVCD*IQGLSS Trigger: GCTGGAAAGACCTTGGATCAAGTCACAGACATGATG...TACTCCCCGGGCCTCGGTGAGGATCCAGGCACCCAGACTCATGGCTTCTAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS GCA 90 bp | CGTCATCCCTCAGGGTCACCAGCACCTTTTTCTTCCGTGACAGAGTaGCTGCTCCGAAGCTGTAATGGTCTGCTTCTTCTCGTTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RHPSGSPAPFSSVTE*LLRSCNGLLLLVSG Trigger: TCCAGAAACGAGAAGAAGCAGACCATTACAGCTTCGGAGCAGGCACTCTGTCACGGAAGAAAAAGGTGCTGGTGACCCTGAGGGATGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CAA 90 bp | CTGCCACGGATCGCTATTCTAGGAACAGGCACTGACATGCTCGAATCTCCTCTTAAGTTGTCGTCATTGTaGATGGGCAGCAGGTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LPRIAILGTGTDMLESPLKLSSL*MGSRSP Trigger: CGGGGACCTGCTGCCCATCAACAATGACGACAACTT...AAGAGGAGATTCGAGCATGTCAGTGCCTGTTCCTAGAATAGCGATCCGTGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS TCA 90 bp | TGCCTGCTCCGAAGCTGTAATGGTCTGCTTCTTCTCGTTTCTGGATaGAGACTCGAAGCAAGGGGTTTGCACTTGAGACTGCCTTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CLLRSCNGLLLLVSG*RLEARGLHLRLPCR Trigger: TCTGCAAGGCAGTCTCAAGTGCAAACCCCTTGCTTCGAGTCTTCATCCAGAAACGAGAAGAAGCAGACCATTACAGCTTCGGAGCAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS TCA 90 bp | TTCTTCTCGTTTCTGGATGAAGACTCGAAGCAAGGGGTTTGCACTTaGGACTGCCTTGCAGAAGTTGTCGTCATTGTTGATGGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FFSFLDEDSKQGVCT*DCLAEVVVIVDGQQ Trigger: CTGCTGCCCATCAACAATGACGACAACTTCTGCAAGGCAGTCTCAAGTGCAAACCCCTTGCTTCGAGTCTTCATCCAGAAACGAGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CAA 90 bp | GTAATATTTGTCTTAGTAAAGCACATTCCAGATCACTGCAGCAACATGGAAACATTCCTCCACCCCTCCTaGGGGGAGGACCAGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VIFVLVKHIPDHCSNMETFLHPS*GEDQAV Trigger: CACAGCCTGGTCCTCCCCCAAGGAGGGGTGGAGGAA...TGTTTCCATGTTGCTGCAGTGATCTGGAATGTGCTTTACTAAGACAAATATTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CAA 90 bp | CGACCTGGAAGACGAAGATGCTTTAAAACCTTTATTTACATGAAGGAGTCACTTGCGCCAAACTTGCTCTaGACTTCCACAGCGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RPGRRRCFKTFIYMKESLAPNLL*TSTALQ Trigger: CTGCAGCGCTGTGGAAGTCAAGAGCAAGTTTGGCGC...AAGTGACTCCTTCATGTAAATAAAGGTTTTAAAGCATCTTCGTCTTCCAGGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
||
| CDS-3UTR CAA 90 bp | GTAATATTTGTCTTAGTAAAGCACATTCCAGATCACTGCAGCAACATGGAAACATCAAACTTCCCAGGCTaGTGGCGGTCCAAGGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VIFVLVKHIPDHCSNMETSNFPG*WRSKEN Trigger: GTTCTCCTTGGACCGCCACAAGCCTGGGAAGTTTGA...TGTTTCCATGTTGCTGCAGTGATCTGGAATGTGCTTTACTAAGACAAATATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
||
| CDS-3UTR CAA 90 bp | CGACCTGGAAGACGAAGATGCTTTAAAACCTTTATTTACATGAAGGAGTCACTTCAGAAGTTGTCGTCATaGTTGATGGGCAGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPGRRRCFKTFIYMKESLQKLSS*LMGSRS Trigger: GGACCTGCTGCCCATCAACAATGACGACAACTTCTG...AAGTGACTCCTTCATGTAAATAAAGGTTTTAAAGCATCTTCGTCTTCCAGGTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CAA 90 bp | CATTCCAGATCACTGCAGCAACATGGAAACAAAACAGTTGCTTTTAGCAGTTTAGCAAGGGGTTTGCACTaGAGACTGCCTTGCAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HSRSLQQHGNKTVAFSSLARGLH*RLPCRS Trigger: ACTTCTGCAAGGCAGTCTCAAGTGCAAACCCCTTGC...TAAACTGCTAAAAGCAACTGTTTTGTTTCCATGTTGCTGCAGTGATCTGGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
||
| CDS-3UTR CAA 90 bp | GTACTACATGCTATTAATATTTGCCACTCATGGGTCTTGGTAACACACAGTCTGACATTGTTCCTTTGGTaGGCCGGCTTGACAGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: VLHAINICHSWVLVTHSLTLFLW*AGLTVT Trigger: TGTCACTGTCAAGCCGGCCAACCAAAGGAACAATGT...CAGACTGTGTGTTACCAAGACCCATGAGTGGCAAATATTAATAGCATGTAGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
||
| CDS-3UTR CAA 90 bp | CGACCTGGAAGACGAAGATGCTTTAAAACCTTTATTTACATGAAGGAGTCACTTACTGCCTTGCAGAAGTaGTCGTCATTGTTGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPGRRRCFKTFIYMKESLTALQK*SSLLMG Trigger: GCCCATCAACAATGACGACAACTTCTGCAAGGCAGT...AAGTGACTCCTTCATGTAAATAAAGGTTTTAAAGCATCTTCGTCTTCCAGGTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS-3UTR CAA 90 bp | CATTCCAGATCACTGCAGCAACATGGAAACAAAACAGTTGCTTTTAGCAGTTTAGCACTTGAGACTGCCTaGCAGAAGTTGTCGTCATTG | + |
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Preference number: 5 (lower is better) Translates to: HSRSLQQHGNKTVAFSSLALETA*QKLSSL Trigger: CAATGACGACAACTTCTGCAAGGCAGTCTCAAGTGC...TAAACTGCTAAAAGCAACTGTTTTGTTTCCATGTTGCTGCAGTGATCTGGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CCA 72 bp | CCCTTCTGTGCAGCCCGTGAGCAAGGCTGGTGCCATTaGCCCTGGAGAGGCTGCCTGGAGGTACAGCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: PFCAAREQGWCH*PWRGCLEVQPA Trigger: CGCAGGCTGTACCTCCAGGCAGCCTCTCCAGGGCCAATGGCACCAGCCTTGCTCACGGGCTGCACAGAAGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CCA 72 bp | TGTGCAGCCCGTGAGCAAGGCTGGTGCCATTGGCCCTaGAGAGGCTGCCTGGAGGTACAGCCTGCGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: CAAREQGWCHWP*RGCLEVQPASW Trigger: CCAAGACGCAGGCTGTACCTCCAGGCAGCCTCTCCAGGGCCAATGGCACCAGCCTTGCTCACGGGCTGCACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CCA 72 bp | GCAGGACATGGGCACCTGGCAGGCTGTGGTGACTGGTaGTGCTGTCTGTGGAATGCACAGAGCTGCCGGACG | + |
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Preference number: 6 (lower is better) Translates to: AGHGHLAGCGDW*CCLWNAQSCRT Trigger: CGTCCGGCAGCTCTGTGCATTCCACAGACAGCACCACCAGTCACCACAGCCTGCCAGGTGCCCATGTCCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS TCA 72 bp | CTCGGCGGTGCGTCTCCGGGAGGATGTCCACGTCAATaGTGGATGACACTGGGCGGAAGTCATGCGGCATGC | + |
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Preference number: 6 (lower is better) Translates to: LGGASPGGCPRQ*WMTLGGSHAAC Trigger: GCATGCCGCATGACTTCCGCCCAGTGTCATCCATCATTGACGTGGACATCCTCCCGGAGACGCACCGCCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS GCA 72 bp | GGTGACTGGTGGTGCTGTCTGTGGAATGCACAGAGCTaGCGGACGTGCGGCTGCTGCGGACCACATTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GDWWCCLWNAQS*RTCGCCGPHCS Trigger: GGAACAATGTGGTCCGCAGCAGCCGCACGTCCGGCAGCTCTGTGCATTCCACAGACAGCACCACCAGTCACC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CCA 72 bp | TCTGCAGGACATGGGCACCTGGCAGGCTGTGGTGACTaGTGGTGCTGTCTGTGGAATGCACAGAGCTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SAGHGHLAGCGD*WCCLWNAQSCR Trigger: CCGGCAGCTCTGTGCATTCCACAGACAGCACCACCAGTCACCACAGCCTGCCAGGTGCCCATGTCCTGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CCA 72 bp | CCCTCCTTGGGGGAGGACCAGGCTGTGTCGGGGGTCTaGCTTCAGAGAGCTGAGAAATCTGTGGATGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PSLGEDQAVSGV*LQRAEKSVDAA Trigger: GGCAGCATCCACAGATTTCTCAGCTCTCTGAAGCCAGACCCCCGACACAGCCTGGTCCTCCCCCAAGGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CAA 72 bp | GATGACACTGGGCGGAAGTCATGCGGCATGCTGATGTaGAGGTGGGGACGCCGACGCAGACCGTCATCCCTC | + |
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Preference number: 6 (lower is better) Translates to: DDTGRKSCGMLM*RWGRRRRPSSL Trigger: GAGGGATGACGGTCTGCGTCGGCGTCCCCACCTCAACATCAGCATGCCGCATGACTTCCGCCCAGTGTCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS TCA 72 bp | GGACCAGGCTGTGTCGGGGGTCTGGCTTCAGAGAGCTaGGAAATCTGTGGATGCTGCCGTTGCTCTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GPGCVGGLASES*EICGCCRCSPS Trigger: GGAGGGAGAGCAACGGCAGCATCCACAGATTTCTCAGCTCTCTGAAGCCAGACCCCCGACACAGCCTGGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS GCA 72 bp | CGTGAGCAAGGCTGGTGCCATTGGCCCTGGAGAGGCTaGCTGGAGGTACAGCCTGCGTCTTGGGAATGTGTT | + |
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Preference number: 6 (lower is better) Translates to: REQGWCHWPWRG*LEVQPASWECV Trigger: AACACATTCCCAAGACGCAGGCTGTACCTCCAGGCAGCCTCTCCAGGGCCAATGGCACCAGCCTTGCTCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CAA 90 bp | TCAATGATGGATGACACTGGGCGGAAGTCATGCGGCATGCTGATGTaGAGGTGGGGACGCCGACGCAGACCGTCATCCCTCAGGGTCACC | + |
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Preference number: 6 (lower is better) Translates to: SMMDDTGRKSCGMLM*RWGRRRRPSSLRVT Trigger: GGTGACCCTGAGGGATGACGGTCTGCGTCGGCGTCCCCACCTCAACATCAGCATGCCGCATGACTTCCGCCCAGTGTCATCCATCATTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CAA 72 bp | ACAGAGCTGCCGGACGTGCGGCTGCTGCGGACCACATaGTTCCTTTGGTTGGCCGGCTTGACAGTGACAATG | + |
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Preference number: 6 (lower is better) Translates to: TELPDVRLLRTT*FLWLAGLTVTM Trigger: CATTGTCACTGTCAAGCCGGCCAACCAAAGGAACAATGTGGTCCGCAGCAGCCGCACGTCCGGCAGCTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CAA 90 bp | CGGGGGTCTGGCTTCAGAGAGCTGAGAAATCTGTGGATGCTGCCGTaGCTCTCCCTCCCAGAGCTATGCAGGCTCATGTCCCTTCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: RGSGFRELRNLWMLP*LSLPELCRLMSLLC Trigger: GCACAGAAGGGACATGAGCCTGCATAGCTCTGGGAGGGAGAGCAACGGCAGCATCCACAGATTTCTCAGCTCTCTGAAGCCAGACCCCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS GCA 72 bp | CCTCCAGGACTTCATCATTCACAGCCAGTAGCCCAGTaGTCTCCGCAAGGCCCCCGGGTACCATTCGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: PPGLHHSQPVAQ*SPQGPRVPFEK Trigger: TTTCTCGAATGGTACCCGGGGGCCTTGCGGAGAGCACTGGGCTACTGGCTGTGAATGATGAAGTCCTGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS TCA 72 bp | AGGAGAACCTTCGGAACTCGGCGCCAAACTTGCTCTTaGCTTCCACAGCGCTGCAGTCGTAGAAGCGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: RRTFGTRRQTCS*LPQRCSRRSVG Trigger: CCCTACGCTTCTACGACTGCAGCGCTGTGGAAGTCAAGAGCAAGTTTGGCGCCGAGTTCCGAAGGTTCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS TCA 72 bp | GTGCGTCTCCGGGAGGATGTCCACGTCAATGATGGATaGCACTGGGCGGAAGTCATGCGGCATGCTGATGTT | + |
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Preference number: 6 (lower is better) Translates to: VRLREDVHVNDG*HWAEVMRHADV Trigger: AACATCAGCATGCCGCATGACTTCCGCCCAGTGTCATCCATCATTGACGTGGACATCCTCCCGGAGACGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CAA 72 bp | GGCTTCAGAGAGCTGAGAAATCTGTGGATGCTGCCGTaGCTCTCCCTCCCAGAGCTATGCAGGCTCATGTCC | + |
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Preference number: 6 (lower is better) Translates to: GFRELRNLWMLP*LSLPELCRLMS Trigger: GGACATGAGCCTGCATAGCTCTGGGAGGGAGAGCAACGGCAGCATCCACAGATTTCTCAGCTCTCTGAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS TCA 72 bp | GTCATCCCTCAGGGTCACCAGCACCTTTTTCTTCCGTaGCAGAGTGCCTGCTCCGAAGCTGTAATGGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: VIPQGHQHLFLP*QSACSEAVMVC Trigger: GCAGACCATTACAGCTTCGGAGCAGGCACTCTGTCACGGAAGAAAAAGGTGCTGGTGACCCTGAGGGATGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS TCA 72 bp | CTGCCTGGAGGTACAGCCTGCGTCTTGGGAATGTGTTaGGGTTCTAGAGCCCCTTCAATGACAATGTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: LPGGTACVLGMC*GSRAPSMTMSA Trigger: AGCCGACATTGTCATTGAAGGGGCTCTAGAACCTCAACACATTCCCAAGACGCAGGCTGTACCTCCAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS GCA 72 bp | TCAGGGTCACCAGCACCTTTTTCTTCCGTGACAGAGTaGCTGCTCCGAAGCTGTAATGGTCTGCTTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SGSPAPFSSVTE*LLRSCNGLLLL Trigger: GAGAAGAAGCAGACCATTACAGCTTCGGAGCAGGCACTCTGTCACGGAAGAAAAAGGTGCTGGTGACCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS CAA 72 bp | AAGACTCGAAGCAAGGGGTTTGCACTTGAGACTGCCTaGCAGAAGTTGTCGTCATTGTTGATGGGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: KTRSKGFALETA*QKLSSLLMGSR Trigger: CCTGCTGCCCATCAACAATGACGACAACTTCTGCAAGGCAGTCTCAAGTGCAAACCCCTTGCTTCGAGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS TCA 72 bp | CGAAGCTGTAATGGTCTGCTTCTTCTCGTTTCTGGATaGAGACTCGAAGCAAGGGGTTTGCACTTGAGACTG | + |
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Preference number: 6 (lower is better) Translates to: RSCNGLLLLVSG*RLEARGLHLRL Trigger: CAGTCTCAAGTGCAAACCCCTTGCTTCGAGTCTTCATCCAGAAACGAGAAGAAGCAGACCATTACAGCTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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| CDS TCA 72 bp | TTTCTGGATGAAGACTCGAAGCAAGGGGTTTGCACTTaGGACTGCCTTGCAGAAGTTGTCGTCATTGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: FLDEDSKQGVCT*DCLAEVVVIVD Trigger: ATCAACAATGACGACAACTTCTGCAAGGCAGTCTCAAGTGCAAACCCCTTGCTTCGAGTCTTCATCCAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070219.9 |
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