RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAQR9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000064225

Ensembl transcript IDs: ENSMUST00000079597.7

Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGAGAGGGGAGGTGAAGCCTCCTTTTTCCTGGAGCATGCTGTGTaGGGAGATCTTGCCTGGGAAAGCGGGTCATCTCACTGGCTCGTG +
Preference number: 1 (lower is better)
Translates to: EERGGEASFFLEHAV*GDLAWESGSSHWLV
Trigger: CACGAGCCAGTGAGATGACCCGCTTTCCCAGGCAAGATCTCCCCACACAGCATGCTCCAGGAAAAAGGAGGCTTCACCTCCCCTCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 90 bp CACATGCCCAGGCTGAGCATCCCGCTGTCTCTATGGTTGCTATGGTaGCACTCCAGCCAGGGAAATGTGCCTCACATTATTGCCCAGGTA +
Preference number: 1 (lower is better)
Translates to: HMPRLSIPLSLWLLW*HSSQGNVPHIIAQV
Trigger: TACCTGGGCAATAATGTGAGGCACATTTCCCTGGCTGGAGTGTCACCATAGCAACCATAGAGACAGCGGGATGCTCAGCCTGGGCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CCA 90 bp CTTCTGTTTCACCTCCCATCTCCCTCTTCTAAAGGCCAGTGGACTTaGGATTCCCCAACTGTCAGGGAACCTTTCCCTAGTGGCCTGCAG +
Preference number: 1 (lower is better)
Translates to: LLFHLPSPSSKGQWT*DSPTVREPFPSGLQ
Trigger: CTGCAGGCCACTAGGGAAAGGTTCCCTGACAGTTGGGGAATCCCAAGTCCACTGGCCTTTAGAAGAGGGAGATGGGAGGTGAAACAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 90 bp CATGAAACCTTTCCATTTGATGTCTTAACCCCCGCCCCCTGCCTCTaGTCCAAGCACGGGAAGACAGACAGTCCCTCCAACAATACCCTT +
Preference number: 1 (lower is better)
Translates to: HETFPFDVLTPAPCL*SKHGKTDSPSNNTL
Trigger: AAGGGTATTGTTGGAGGGACTGTCTGTCTTCCCGTGCTTGGAGCAGAGGCAGGGGGCGGGGGTTAAGACATCAAATGGAAAGGTTTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CCA 90 bp GAAGCCTCCTTTTTCCTGGAGCATGCTGTGTGGGGAGATCTTGCCTaGGAAAGCGGGTCATCTCACTGGCTCGTGCATCATAATCACTTG +
Preference number: 1 (lower is better)
Translates to: EASFFLEHAVWGDLA*ESGSSHWLVHHNHL
Trigger: CAAGTGATTATGATGCACGAGCCAGTGAGATGACCCGCTTTCCCAGGCAAGATCTCCCCACACAGCATGCTCCAGGAAAAAGGAGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 90 bp CCTGGGAAAGCGGGTCATCTCACTGGCTCGTGCATCATAATCACTTaGAAACGATCCGGGTATGATTTTTATCCTCAAGTGGCCTCTGCT +
Preference number: 1 (lower is better)
Translates to: PGKAGHLTGSCIIIT*KRSGYDFYPQVASA
Trigger: AGCAGAGGCCACTTGAGGATAAAAATCATACCCGGATCGTTTTCAAGTGATTATGATGCACGAGCCAGTGAGATGACCCGCTTTCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CCA 90 bp GAAGACAGACAGTCCCTCCAACAATACCCTTGTAAGGCAGATGGCTaGATGCCTAAGCACACTGGGAATCCTTTTAGGAACCTGTTGTCT +
Preference number: 1 (lower is better)
Translates to: EDRQSLQQYPCKADG*MPKHTGNPFRNLLS
Trigger: AGACAACAGGTTCCTAAAAGGATTCCCAGTGTGCTTAGGCATCCAGCCATCTGCCTTACAAGGGTATTGTTGGAGGGACTGTCTGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 90 bp AGTGCCTGTTCTCACGTTCATGGATTCTTCCAGATGTCTCTCTCTTaGGAGTTCCTTCCAGAGGGGGTGTCCCAATTCAACAACCATAAC +
Preference number: 1 (lower is better)
Translates to: SACSHVHGFFQMSLS*EFLPEGVSQFNNHN
Trigger: GTTATGGTTGTTGAATTGGGACACCCCCTCTGGAAGGAACTCTCAAGAGAGAGACATCTGGAAGAATCCATGAACGTGAGAACAGGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 90 bp TTCCATGCATTGTCTAGCGGGTTAAGCCCCGGGTTTGTGTCTTTGTaGCCATTTCCCAACAGAGAAAGCTCCATTCTTTCGACAAATCCA +
Preference number: 1 (lower is better)
Translates to: FHALSSGLSPGFVSL*PFPNRESSILSTNP
Trigger: TGGATTTGTCGAAAGAATGGAGCTTTCTCTGTTGGGAAATGGGCACAAAGACACAAACCCGGGGCTTAACCCGCTAGACAATGCATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 90 bp CACAGGATAAATGTACTACTCAAAATATCCCACGGCACGCAGAGCTaGCGTCAAAAGCTGCAGGGTGGTGTTAGGATGCCAAATAGAATC +
Preference number: 1 (lower is better)
Translates to: HRINVLLKISHGTQS*RQKLQGGVRMPNRI
Trigger: GATTCTATTTGGCATCCTAACACCACCCTGCAGCTTTTGACGGCAGCTCTGCGTGCCGTGGGATATTTTGAGTAGTACATTTATCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CCA 90 bp GTAAGGCGTGGGGAAGGTGGCCTGCCACTTTTCCACATTCGAGAATaGAATTGTACACTCAAGATATTTCCTTGGGAAATGTCATGTTTG +
Preference number: 1 (lower is better)
Translates to: VRRGEGGLPLFHIRE*NCTLKIFPWEMSCL
Trigger: CAAACATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTCTCGAATGTGGAAAAGTGGCAGGCCACCTTCCCCACGCCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 90 bp AACTCTCTCAAGCAGCTTGCCCTAAGGTCCAGTTCACGTGTGCAATaGAGAAGGCTGCAAAAATCAAAACTATGTGACAAAGGAAATCCA +
Preference number: 1 (lower is better)
Translates to: NSLKQLALRSSSRVQ*RRLQKSKLCDKGNP
Trigger: TGGATTTCCTTTGTCACATAGTTTTGATTTTTGCAGCCTTCTGCATTGCACACGTGAACTGGACCTTAGGGCAAGCTGCTTGAGAGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 90 bp TCTCACTGGCTCGTGCATCATAATCACTTGAAAACGATCCGGGTATaGTTTTTATCCTCAAGTGGCCTCTGCTTAAAGACAAAGACACAC +
Preference number: 1 (lower is better)
Translates to: SHWLVHHNHLKTIRV*FLSSSGLCLKTKTH
Trigger: GTGTGTCTTTGTCTTTAAGCAGAGGCCACTTGAGGATAAAAATCATACCCGGATCGTTTTCAAGTGATTATGATGCACGAGCCAGTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 90 bp AGTGGGAAAAGAATATGCTGTTCTCCCAGTACAAGAAGCTACGTTTaGGGACCAGTCATTTGGGCATTGCTTCAAAAGGCACATTTATTT +
Preference number: 1 (lower is better)
Translates to: SGKRICCSPSTRSYV*GPVIWALLQKAHLF
Trigger: AAATAAATGTGCCTTTTGAAGCAATGCCCAAATGACTGGTCCTCAAACGTAGCTTCTTGTACTGGGAGAACAGCATATTCTTTTCCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 90 bp TACACCACTAAGCCAATGCTCCCCATTCTTAGTTGCCTCTTAGTCTaGAGGACTTTTACCAAGAAGTGTGGCGAATATTTAAATATACTG +
Preference number: 1 (lower is better)
Translates to: YTTKPMLPILSCLLV*RTFTKKCGEYLNIL
Trigger: CAGTATATTTAAATATTCGCCACACTTCTTGGTAAAAGTCCTTCAGACTAAGAGGCAACTAAGAATGGGGAGCATTGGCTTAGTGGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 90 bp TGTGCAAGTGAACACACTCAGGGCATTGGTTCCTCCAGGGAATTGTaGCAAGGTTCTCTATTTACAAATACAATAGCAATTAAAAGCATA +
Preference number: 1 (lower is better)
Translates to: CASEHTQGIGSSREL*QGSLFTNTIAIKSI
Trigger: TATGCTTTTAATTGCTATTGTATTTGTAAATAGAGAACCTTGGCACAATTCCCTGGAGGAACCAATGCCCTGAGTGTGTTCACTTGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CCA 90 bp CTTTTCCACATTCGAGAATGGAATTGTACACTCAAGATATTTCCTTaGGAAATGTCATGTTTGGAACAAAAAGCATTAAAGCGTCTCTGT +
Preference number: 1 (lower is better)
Translates to: LFHIREWNCTLKIFP*EMSCLEQKALKRLC
Trigger: ACAGAGACGCTTTAATGCTTTTTGTTCCAAACATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTCTCGAATGTGGAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp GCCCACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTTGGAACTGTAAGGCGTaGGGAAGGTGGCCTGCCACT +
Preference number: 2 (lower is better)
Translates to: AHLGVVVSQEKQGLYCTAWNCKA*GRWPAT
Trigger: AGTGGCAGGCCACCTTCCCCACGCCTTACAGTTCCA...AGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp GCCCACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTGGTCCAGTTCACGTGTaGAATGCAGAAGGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: AHLGVVVSQEKQGLYCTAGPVHV*NAEGCK
Trigger: TTTGCAGCCTTCTGCATTGCACACGTGAACTGGACC...AGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp GCCCACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTTCCTCAAGTGGCCTCTaGTTAAAGACAAAGACACAC +
Preference number: 2 (lower is better)
Translates to: AHLGVVVSQEKQGLYCTASSSGL*LKTKTH
Trigger: GTGTGTCTTTGTCTTTAAGCAGAGGCCACTTGAGGA...AGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp AGGCACTCTGAGCAAACCACTCTTCGAAATGATGTGGACGCCATAACCTTCCAGCCCTTCCGAGGGGGCTaGTCCTGGAGATGCCACCTA +
Preference number: 2 (lower is better)
Translates to: RHSEQTTLRNDVDAITFQPFRGG*SWRCHL
Trigger: TAGGTGGCATCTCCAGGAGCAGCCCCCTCGGAAGGG...CTGGAAGGTTATGGCGTCCACATCATTTCGAAGAGTGGTTTGCTCAGAGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp GCCCACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTGAAAAGCCAACTGCTTaGGGCTCTATCTGTAATCAC +
Preference number: 2 (lower is better)
Translates to: AHLGVVVSQEKQGLYCTAEKPTA*GSICNH
Trigger: GTGATTACAGATAGAGCCCCAAGCAGTTGGCTTTTC...AGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 90 bp GAGGTGAAGCCTCCTTTTTCCTGGAGCATGCTGTGTGGGGAGATCTaGCCTGGGAAAGCGGGTCATCTCACTGGCTCGTGCATCATAATC +
Preference number: 2 (lower is better)
Translates to: EVKPPFSWSMLCGEI*PGKAGHLTGSCIII
Trigger: GATTATGATGCACGAGCCAGTGAGATGACCCGCTTTCCCAGGCAAGATCTCCCCACACAGCATGCTCCAGGAAAAAGGAGGCTTCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp GCCCACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTAGCAGATATACTAGCTaGGGGAGTGGAAGGTTAAAA +
Preference number: 2 (lower is better)
Translates to: AHLGVVVSQEKQGLYCTASRYTS*GSGRLK
Trigger: TTTTAACCTTCCACTCCCCCAGCTAGTATATCTGCT...AGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp CCCTCCAACAATACCCTTGTAAGGCAGATGGCTGGATGCCTAAGCACACTGGGAAAGGCGTGGGGAAGGTaGCCTGCCACTTTTCCACAT +
Preference number: 2 (lower is better)
Translates to: PSNNTLVRQMAGCLSTLGKAWGR*PATFPH
Trigger: ATGTGGAAAAGTGGCAGGCCACCTTCCCCACGCCTT...TCCCAGTGTGCTTAGGCATCCAGCCATCTGCCTTACAAGGGTATTGTTGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp ACCATCCGAAGGCTCCTCCCGACCCGGCCTTCACTGCGCGTGCTTACTGCATATACAAAGGAAATCCAGTaGATCTCACAGGCTTCGATA +
Preference number: 2 (lower is better)
Translates to: TIRRLLPTRPSLRVLTAYTKEIQ*ISQASI
Trigger: TATCGAAGCCTGTGAGATGCACTGGATTTCCTTTGT...ATATGCAGTAAGCACGCGCAGTGAAGGCCGGGTCGGGAGGAGCCTTCGGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp ACCATCCGAAGGCTCCTCCCGACCCGGCCTTCACTGCGCGTGCTTACTGCATATGACAAAAACCCAGGGTaGGTTTTGTGGAATACATCA +
Preference number: 2 (lower is better)
Translates to: TIRRLLPTRPSLRVLTAYDKNPG*VLWNTS
Trigger: TGATGTATTCCACAAAACCCACCCTGGGTTTTTGTC...ATATGCAGTAAGCACGCGCAGTGAAGGCCGGGTCGGGAGGAGCCTTCGGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp ACCATCCGAAGGCTCCTCCCGACCCGGCCTTCACTGCGCGTGCTTACTGCATATAAACACCTGCCTGAGTaGAATCTTGCTTTGACTTCA +
Preference number: 2 (lower is better)
Translates to: TIRRLLPTRPSLRVLTAYKHLPE*NLALTS
Trigger: TGAAGTCAAAGCAAGATTCCACTCAGGCAGGTGTTT...ATATGCAGTAAGCACGCGCAGTGAAGGCCGGGTCGGGAGGAGCCTTCGGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR TCA 90 bp CACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTAAACTAGGAAGATCACATTaGAGACTAGGTAGGCATCAG +
Preference number: 2 (lower is better)
Translates to: HLGVVVSQEKQGLYCTAKLGRSH*RLGRHQ
Trigger: CTGATGCCTACCTAGTCTTCAATGTGATCTTCCTAG...TTTAGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR TCA 90 bp AGATTCAAATTCAGGGCTACCACATGCCTAAGCAAAAGGAAGAACCGCAACAGAACCTCGGAGTGGTGGTaGGCCAGGAGAAGCAGGGTC +
Preference number: 2 (lower is better)
Translates to: RFKFRATTCLSKRKNRNRTSEWW*ARRSRV
Trigger: GACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGT...TCTGTTGCGGTTCTTCCTTTTGCTTAGGCATGTGGTAGCCCTGAATTTGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp CCATACCTGTCGACTATAGCTTTGAGCAGATATACTAGCTGGGGGAGTGGAAGGCTTTCCCTAGTGGCCTaGAGCACCCTCTTCCAGCAA +
Preference number: 2 (lower is better)
Translates to: PYLSTIALSRYTSWGSGRLSLVA*STLFQQ
Trigger: TTGCTGGAAGAGGGTGCTGCAGGCCACTAGGGAAAG...CCTTCCACTCCCCCAGCTAGTATATCTGCTCAAAGCTATAGTCGACAGGTATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp GCCCACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTTGTTCATCCATGATTTaGAGCAAAGTGGGAAAAGAA +
Preference number: 2 (lower is better)
Translates to: AHLGVVVSQEKQGLYCTACSSMI*SKVGKE
Trigger: TTCTTTTCCCACTTTGCTGCAAATCATGGATGAACA...AGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp CCATACCTGTCGACTATAGCTTTGAGCAGATATACTAGCTGGGGGAGTGGAAGGTGTGTGGGGAGATCTTaGCTGGGAAAGCGGGTCATC +
Preference number: 2 (lower is better)
Translates to: PYLSTIALSRYTSWGSGRCVGRS*LGKRVI
Trigger: GATGACCCGCTTTCCCAGGCAAGATCTCCCCACACA...CCTTCCACTCCCCCAGCTAGTATATCTGCTCAAAGCTATAGTCGACAGGTATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp CCCTCCAACAATACCCTTGTAAGGCAGATGGCTGGATGCCTAAGCACACTGGGAACTGCGCGTGCTTACTaGATATTTGGGGTGGAACTG +
Preference number: 2 (lower is better)
Translates to: PSNNTLVRQMAGCLSTLGTARAY*IFGVEL
Trigger: CAGTTCCACCCCAAATATGCAGTAAGCACGCGCAGT...TCCCAGTGTGCTTAGGCATCCAGCCATCTGCCTTACAAGGGTATTGTTGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp ACCATCCGAAGGCTCCTCCCGACCCGGCCTTCACTGCGCGTGCTTACTGCATATAACTCTGCAAGGATTTaGGGTGACTACCAATCATTT +
Preference number: 2 (lower is better)
Translates to: TIRRLLPTRPSLRVLTAYNSARI*GDYQSF
Trigger: AAATGATTGGTAGTCACCCCAAATCCTTGCAGAGTT...ATATGCAGTAAGCACGCGCAGTGAAGGCCGGGTCGGGAGGAGCCTTCGGATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp CCCTCCAACAATACCCTTGTAAGGCAGATGGCTGGATGCCTAAGCACACTGGGAACAGACTTTTTCTGCTaGGCCTTCCCAAGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: PSNNTLVRQMAGCLSTLGTDFFC*AFPREG
Trigger: TCCCTCTCTTGGGAAGGCCCAGCAGAAAAAGTCTGT...TCCCAGTGTGCTTAGGCATCCAGCCATCTGCCTTACAAGGGTATTGTTGGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR TCA 90 bp CACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTAAATATCAGTTTGAAGACTaGATTCTGTCACCTTCAGCC +
Preference number: 2 (lower is better)
Translates to: HLGVVVSQEKQGLYCTAKYQFED*ILSPSA
Trigger: GGCTGAAGGTGACAGAATTCAGTCTTCAAACTGATA...TTTAGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp CCCTCCAACAATACCCTTGTAAGGCAGATGGCTGGATGCCTAAGCACACTGGGACCAAATAGAATCCCTTaGCACCTGTTTGAGCACGGA +
Preference number: 2 (lower is better)
Translates to: PSNNTLVRQMAGCLSTLGPNRIP*HLFEHG
Trigger: TCCGTGCTCAAACAGGTGGCAAGGGATTCTATTTGG...TCCCAGTGTGCTTAGGCATCCAGCCATCTGCCTTACAAGGGTATTGTTGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp CCCTCCAACAATACCCTTGTAAGGCAGATGGCTGGATGCCTAAGCACACTGGGACAACTCACGGAGCAATaGGCACAGACATCACTCATT +
Preference number: 2 (lower is better)
Translates to: PSNNTLVRQMAGCLSTLGQLTEQ*AQTSLI
Trigger: AATGAGTGATGTCTGTGCCCATTGCTCCGTGAGTTG...TCCCAGTGTGCTTAGGCATCCAGCCATCTGCCTTACAAGGGTATTGTTGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp GCCCACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTCTCAAGATATTTCCTTaGGAAATGTCATGTTTGGAA +
Preference number: 2 (lower is better)
Translates to: AHLGVVVSQEKQGLYCTALKIFP*EMSCLE
Trigger: TTCCAAACATGACATTTCCCAAGGAAATATCTTGAG...AGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 90 bp CACACTGGGAATCCTTTTAGGAACCTGTTGTCTTCAAGGCTGGTTTaGTGGAGAGTAAAGGCTTCAACGGTGGCTGGAATGGCTTGGGGA +
Preference number: 2 (lower is better)
Translates to: HTGNPFRNLLSSRLV*WRVKASTVAGMAWG
Trigger: TCCCCAAGCCATTCCAGCCACCGTTGAAGCCTTTACTCTCCACAAAACCAGCCTTGAAGACAACAGGTTCCTAAAAGGATTCCCAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp CCCTCCAACAATACCCTTGTAAGGCAGATGGCTGGATGCCTAAGCACACTGGGATTCAGGGCTACCACATaGCTAAGCAAAAGGAAGAAC +
Preference number: 2 (lower is better)
Translates to: PSNNTLVRQMAGCLSTLGFRATT*LSKRKN
Trigger: GTTCTTCCTTTTGCTTAGGCATGTGGTAGCCCTGAA...TCCCAGTGTGCTTAGGCATCCAGCCATCTGCCTTACAAGGGTATTGTTGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp AGGCACTCTGAGCAAACCACTCTTCGAAATGATGTGGACGCCATAACCTTCCAGACACACTCAGGGCATTaGTTCCTCCAGGGAATTGTG +
Preference number: 2 (lower is better)
Translates to: RHSEQTTLRNDVDAITFQTHSGH*FLQGIV
Trigger: CACAATTCCCTGGAGGAACCAATGCCCTGAGTGTGT...CTGGAAGGTTATGGCGTCCACATCATTTCGAAGAGTGGTTTGCTCAGAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp CCATACCTGTCGACTATAGCTTTGAGCAGATATACTAGCTGGGGGAGTGGAAGGTCCCTGGGCTATTTATaGAACGTGTATGGCCAGTGG +
Preference number: 2 (lower is better)
Translates to: PYLSTIALSRYTSWGSGRSLGYL*NVYGQW
Trigger: CCACTGGCCATACACGTTCCATAAATAGCCCAGGGA...CCTTCCACTCCCCCAGCTAGTATATCTGCTCAAAGCTATAGTCGACAGGTATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 90 bp GATGGCTGGATGCCTAAGCACACTGGGAATCCTTTTAGGAACCTGTaGTCTTCAAGGCTGGTTTTGTGGAGAGTAAAGGCTTCAACGGTG +
Preference number: 2 (lower is better)
Translates to: DGWMPKHTGNPFRNL*SSRLVLWRVKASTV
Trigger: CACCGTTGAAGCCTTTACTCTCCACAAAACCAGCCTTGAAGACAACAGGTTCCTAAAAGGATTCCCAGTGTGCTTAGGCATCCAGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR TCA 90 bp GCCACTCTGGACAGTTATGTAGCCCCGTACTTTCTCCCTGGGCTATTTATGGAAAAGCCAGTCATGACATaGAGGAGTCTGTACTTCCTC +
Preference number: 2 (lower is better)
Translates to: ATLDSYVAPYFLPGLFMEKPVMT*RSLYFL
Trigger: GAGGAAGTACAGACTCCTTCATGTCATGACTGGCTT...TTCCATAAATAGCCCAGGGAGAAAGTACGGGGCTACATAACTGTCCAGAGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp CACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTAAACAGTCATTTGGGCATTaGTTCAAAAGGCACATTTAT +
Preference number: 2 (lower is better)
Translates to: HLGVVVSQEKQGLYCTAKQSFGH*FKRHIY
Trigger: ATAAATGTGCCTTTTGAAGCAATGCCCAAATGACTG...TTTAGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp CACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTAAATTTATGGAACGTGTATaGCCAGTGGAAAAAGATCAT +
Preference number: 2 (lower is better)
Translates to: HLGVVVSQEKQGLYCTAKFMERV*PVEKDH
Trigger: ATGATCTTTTTCCACTGGCCATACACGTTCCATAAA...TTTAGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR TCA 90 bp GCCACTCTGGACAGTTATGTAGCCCCGTACTTTCTCCCTGGGCTATTTATGGAACGTTCTGTTCATCCATaGTTTGCAGCAAAGTGGGAA +
Preference number: 2 (lower is better)
Translates to: ATLDSYVAPYFLPGLFMERSVHP*FAAKWE
Trigger: TTCCCACTTTGCTGCAAATCATGGATGAACAGAACG...TTCCATAAATAGCCCAGGGAGAAAGTACGGGGCTACATAACTGTCCAGAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp GAGCAGCTGTTCCACGTTGGCTGTCTGAATCCAATTCTCTCTCTCTCTCGTTATTCTTCTAAAGGCCAGTaGACTTGGGATTCCCCAACT +
Preference number: 2 (lower is better)
Translates to: EQLFHVGCLNPILSLSRYSSKGQ*TWDSPT
Trigger: AGTTGGGGAATCCCAAGTCCACTGGCCTTTAGAAGA...ATAACGAGAGAGAGAGAGAATTGGATTCAGACAGCCAACGTGGAACAGCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 90 bp ACATTCCATGCATTGTCTAGCGGGTTAAGCCCCGGGTTTGTGTCTTaGTGCCCATTTCCCAACAGAGAAAGCTCCATTCTTTCGACAAAT +
Preference number: 2 (lower is better)
Translates to: TFHALSSGLSPGFVS*CPFPNRESSILSTN
Trigger: ATTTGTCGAAAGAATGGAGCTTTCTCTGTTGGGAAATGGGCACAAAGACACAAACCCGGGGCTTAACCCGCTAGACAATGCATGGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR TCA 90 bp CCCTCCAACAATACCCTTGTAAGGCAGATGGCTGGATGCCTAAGCACACTGGGAAGAGAGGGAATTCATTaGAAGTTTCTAAGCAGAATC +
Preference number: 2 (lower is better)
Translates to: PSNNTLVRQMAGCLSTLGREGIH*KFLSRI
Trigger: GATTCTGCTTAGAAACTTTCAATGAATTCCCTCTCT...TCCCAGTGTGCTTAGGCATCCAGCCATCTGCCTTACAAGGGTATTGTTGGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp ACACTGGGAATCCTTTTAGGAACCTGTTGTCTTCAAGGCTGGTTTTGTGGAGAGAGGGTGGTGTTAGGATaGCAAATAGAATCCCTTGCC +
Preference number: 2 (lower is better)
Translates to: TLGILLGTCCLQGWFCGERVVLG*QIESLA
Trigger: GGCAAGGGATTCTATTTGGCATCCTAACACCACCCT...CTCTCCACAAAACCAGCCTTGAAGACAACAGGTTCCTAAAAGGATTCCCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp ACACTGGGAATCCTTTTAGGAACCTGTTGTCTTCAAGGCTGGTTTTGTGGAGAGTGTATGTGGTGTATCTaGGAACAGGAAGGGAAGCCA +
Preference number: 2 (lower is better)
Translates to: TLGILLGTCCLQGWFCGECMWCI*EQEGKP
Trigger: TGGCTTCCCTTCCTGTTCCCAGATACACCACATACA...CTCTCCACAAAACCAGCCTTGAAGACAACAGGTTCCTAAAAGGATTCCCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp ACACTGGGAATCCTTTTAGGAACCTGTTGTCTTCAAGGCTGGTTTTGTGGAGAGCGGGAATGGTGTATGTaGTGTATCTGGGAACAGGAA +
Preference number: 2 (lower is better)
Translates to: TLGILLGTCCLQGWFCGEREWCM*CIWEQE
Trigger: TTCCTGTTCCCAGATACACCACATACACCATTCCCG...CTCTCCACAAAACCAGCCTTGAAGACAACAGGTTCCTAAAAGGATTCCCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp ACACTGGGAATCCTTTTAGGAACCTGTTGTCTTCAAGGCTGGTTTTGTGGAGAGCCCGTACTTTCTCCCTaGGCTATTTATGGAACGTGT +
Preference number: 2 (lower is better)
Translates to: TLGILLGTCCLQGWFCGEPVLSP*AIYGTC
Trigger: ACACGTTCCATAAATAGCCCAGGGAGAAAGTACGGG...CTCTCCACAAAACCAGCCTTGAAGACAACAGGTTCCTAAAAGGATTCCCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 90 bp CATTTCCCAACAGAGAAAGCTCCATTCTTTCGACAAATCCAAGCATaGCTAGACCTCAGAAGCAGCCAGGGGTTTGTGTTTATCCTCTTC +
Preference number: 2 (lower is better)
Translates to: HFPTEKAPFFRQIQA*LDLRSSQGFVFILF
Trigger: GAAGAGGATAAACACAAACCCCTGGCTGCTTCTGAGGTCTAGCAATGCTTGGATTTGTCGAAAGAATGGAGCTTTCTCTGTTGGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 90 bp GCGTGGGGAAGGTGGCCTGCCACTTTTCCACATTCGAGAATGGAATaGTACACTCAAGATATTTCCTTGGGAAATGTCATGTTTGGAACA +
Preference number: 2 (lower is better)
Translates to: AWGRWPATFPHSRME*YTQDISLGNVMFGT
Trigger: TGTTCCAAACATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTCTCGAATGTGGAAAAGTGGCAGGCCACCTTCCCCACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp GAGCAGCTGTTCCACGTTGGCTGTCTGAATCCAATTCTCTCTCTCTCTCGTTATGAAGTAACAGCAGCATaGAAGAAAGTGTACGTGGAT +
Preference number: 2 (lower is better)
Translates to: EQLFHVGCLNPILSLSRYEVTAA*KKVYVD
Trigger: ATCCACGTACACTTTCTTGCATGCTGCTGTTACTTC...ATAACGAGAGAGAGAGAGAATTGGATTCAGACAGCCAACGTGGAACAGCTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR TCA 90 bp GAGCAGCTGTTCCACGTTGGCTGTCTGAATCCAATTCTCTCTCTCTCTCGTTATTGCATCATAATCACTTaGAAACGATCCGGGTATGAT +
Preference number: 2 (lower is better)
Translates to: EQLFHVGCLNPILSLSRYCIIIT*KRSGYD
Trigger: ATCATACCCGGATCGTTTTCAAGTGATTATGATGCA...ATAACGAGAGAGAGAGAGAATTGGATTCAGACAGCCAACGTGGAACAGCTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp GAGCAGCTGTTCCACGTTGGCTGTCTGAATCCAATTCTCTCTCTCTCTCGTTATCTCAAACTTCTACTCTaGTCTGCTGTAAGACCAAAA +
Preference number: 2 (lower is better)
Translates to: EQLFHVGCLNPILSLSRYLKLLL*SAVRPK
Trigger: TTTTGGTCTTACAGCAGAGCAGAGTAGAAGTTTGAG...ATAACGAGAGAGAGAGAGAATTGGATTCAGACAGCCAACGTGGAACAGCTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp ACACTGGGAATCCTTTTAGGAACCTGTTGTCTTCAAGGCTGGTTTTGTGGAGAGGTGGGTCTATTACTGTaGGAGACTGATCTTATACCA +
Preference number: 2 (lower is better)
Translates to: TLGILLGTCCLQGWFCGEVGLLL*ETDLIP
Trigger: TGGTATAAGATCAGTCTCGCACAGTAATAGACCCAC...CTCTCCACAAAACCAGCCTTGAAGACAACAGGTTCCTAAAAGGATTCCCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 90 bp ATAGACACAGCTGAGCACACAGCTGTCCCTGCTTTCACTATCAGTTaGAAGACTGAATTCTGTCACCTTCAGCCAATGATAAAACCCTTA +
Preference number: 2 (lower is better)
Translates to: IDTAEHTAVPAFTIS*KTEFCHLQPMIKPL
Trigger: TAAGGGTTTTATCATTGGCTGAAGGTGACAGAATTCAGTCTTCAAACTGATAGTGAAAGCAGGGACAGCTGTGTGCTCAGCTGTGTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR TCA 90 bp AATGACTTAAAATGTCCTTCACAATTAGCCTCTAATGCCTTTTTGACCTATGCCAGTAATAGACACAGCTaGGCACACAGCTGTCCCTGC +
Preference number: 2 (lower is better)
Translates to: NDLKCPSQLASNAFLTYASNRHS*AHSCPC
Trigger: GCAGGGACAGCTGTGTGCTCAGCTGTGTCTATTACT...GGCATAGGTCAAAAAGGCATTAGAGGCTAATTGTGAAGGACATTTTAAGTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp AATGACTTAAAATGTCCTTCACAATTAGCCTCTAATGCCTTTTTGACCTATGCCCTCTCTCAAGCAGCTTaGCCTAAGGTCCAGTTCACG +
Preference number: 2 (lower is better)
Translates to: NDLKCPSQLASNAFLTYALSQAA*PKVQFT
Trigger: CGTGAACTGGACCTTAGGGCAAGCTGCTTGAGAGAG...GGCATAGGTCAAAAAGGCATTAGAGGCTAATTGTGAAGGACATTTTAAGTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 90 bp CTGTGTGCAAGTGAACACACTCAGGGCATTGGTTCCTCCAGGGAATaGTGCCAAGGTTCTCTATTTACAAATACAATAGCAATTAAAAGC +
Preference number: 2 (lower is better)
Translates to: LCASEHTQGIGSSRE*CQGSLFTNTIAIKS
Trigger: GCTTTTAATTGCTATTGTATTTGTAAATAGAGAACCTTGGCACAATTCCCTGGAGGAACCAATGCCCTGAGTGTGTTCACTTGCACACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 90 bp ACACACACATTTAACTTCTGTGTGCAAGTGAACACACTCAGGGCATaGGTTCCTCCAGGGAATTGTGCCAAGGTTCTCTATTTACAAATA +
Preference number: 2 (lower is better)
Translates to: THTFNFCVQVNTLRA*VPPGNCAKVLYLQI
Trigger: TATTTGTAAATAGAGAACCTTGGCACAATTCCCTGGAGGAACCAATGCCCTGAGTGTGTTCACTTGCACACAGAAGTTAAATGTGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp GATTCGGCTTCACTGAGTAACAGCACTGGTAGTAAGCACACTATCAACTTCTGTCACACAGAAATCTCCTaGCATTTTGCAAAGGATAAG +
Preference number: 2 (lower is better)
Translates to: DSASLSNSTGSKHTINFCHTEIS*HFAKDK
Trigger: CTTATCCTTTGCAAAATGCCAGGAGATTTCTGTGTG...ACAGAAGTTGATAGTGTGCTTACTACCAGTGCTGTTACTCAGTGAAGCCGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 90 bp AAGTGGGAAAAGAATATGCTGTTCTCCCAGTACAAGAAGCTACGTTaGAGGACCAGTCATTTGGGCATTGCTTCAAAAGGCACATTTATT +
Preference number: 2 (lower is better)
Translates to: KWEKNMLFSQYKKLR*RTSHLGIASKGTFI
Trigger: AATAAATGTGCCTTTTGAAGCAATGCCCAAATGACTGGTCCTCAAACGTAGCTTCTTGTACTGGGAGAACAGCATATTCTTTTCCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp AGAATGGAATTGTACACTCAAGATATTTCCTTGGGAAATGTCATGTTTGGAACACTTTTTCCTGGAGCATaGTGTGTGGGGAGATCTTGC +
Preference number: 2 (lower is better)
Translates to: RMELYTQDISLGNVMFGTLFPGA*CVGRSC
Trigger: GCAAGATCTCCCCACACAGCATGCTCCAGGAAAAAG...TGTTCCAAACATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 90 bp GGGGTGACTACCAATCATTTCCACAGCCTGGATTCAAATGAGACTTaGAGGTTTAACTGGGCAATTGTAGTCTTAACTCAAAAATTTCAG +
Preference number: 2 (lower is better)
Translates to: GVTTNHFHSLDSNET*RFNWAIVVLTQKFQ
Trigger: CTGAAATTTTTGAGTTAAGACTACAATTGCCCAGTTAAACCTCAAAGTCTCATTTGAATCCAGGCTGTGGAAATGATTGGTAGTCACCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp GAATGGAATTGTACACTCAAGATATTTCCTTGGGAAATGTCATGTTTGGAACAAAGTGGGGTTTATGAATaGAAGCAGTCTAAGGCCACT +
Preference number: 2 (lower is better)
Translates to: EWNCTLKIFPWEMSCLEQSGVYE*KQSKAT
Trigger: AGTGGCCTTAGACTGCTTCCATTCATAAACCCCACT...TTGTTCCAAACATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 90 bp CTACACAATATTTACAGTTTGAAAGATCCAAGAGGTCTTTATCATTaGGGTAAGAGCTCAAAGATGAGGCTTTTGAAAAAGCCCTGGTTC +
Preference number: 2 (lower is better)
Translates to: LHNIYSLKDPRGLYH*GKSSKMRLLKKPWF
Trigger: GAACCAGGGCTTTTTCAAAAGCCTCATCTTTGAGCTCTTACCCAAATGATAAAGACCTCTTGGATCTTTCAAACTGTAAATATTGTGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp AGAATGGAATTGTACACTCAAGATATTTCCTTGGGAAATGTCATGTTTGGAACAAGTTCACGTGTGCAATaGAGAAGGCTGCAAAAATCA +
Preference number: 2 (lower is better)
Translates to: RMELYTQDISLGNVMFGTSSRVQ*RRLQKS
Trigger: TGATTTTTGCAGCCTTCTGCATTGCACACGTGAACT...TGTTCCAAACATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 90 bp GAATGGAATTGTACACTCAAGATATTTCCTTGGGAAATGTCATGTTaGGAACAAAAAGCATTAAAGCGTCTCTGTTACATTCCGAAGCTT +
Preference number: 2 (lower is better)
Translates to: EWNCTLKIFPWEMSC*EQKALKRLCYIPKL
Trigger: AAGCTTCGGAATGTAACAGAGACGCTTTAATGCTTTTTGTTCCAAACATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR GCA 90 bp TATTTTGAACTGTTAAATGCAATCAAACCTAGTGGATGTGGTGAAATGGAGAAGAGTGGGAAAAGAATATaGTGTTCTCCCAGTACAAGA +
Preference number: 2 (lower is better)
Translates to: YFELLNAIKPSGCGEMEKSGKRI*CSPSTR
Trigger: TCTTGTACTGGGAGAACAGCATATTCTTTTCCCACT...CTTCTCCATTTCACCACATCCACTAGGTTTGATTGCATTTAACAGTTCAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp GAATGGAATTGTACACTCAAGATATTTCCTTGGGAAATGTCATGTTTGGAACAAGTGGATGTGGTGAAATaGAGAAGGTGGAAAAGTATT +
Preference number: 2 (lower is better)
Translates to: EWNCTLKIFPWEMSCLEQVDVVK*RRWKSI
Trigger: AATACTTTTCCACCTTCTCCATTTCACCACATCCAC...TTGTTCCAAACATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR TCA 90 bp TATTTTGAACTGTTAAATGCAATCAAACCTAGTGGATGTGGTGAAATGGAGAAGAACAAAAACCTAAAGTaGCAAACTCTGGGTGTTAGT +
Preference number: 2 (lower is better)
Translates to: YFELLNAIKPSGCGEMEKNKNLK*QTLGVS
Trigger: ACTAACACCCAGAGTTTGTCACTTTAGGTTTTTGTT...CTTCTCCATTTCACCACATCCACTAGGTTTGATTGCATTTAACAGTTCAAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp GAATGGAATTGTACACTCAAGATATTTCCTTGGGAAATGTCATGTTTGGAACAAAGGCCAGAAGATTTTTaGAGAGTTAAGCATAAGCTA +
Preference number: 2 (lower is better)
Translates to: EWNCTLKIFPWEMSCLEQRPEDF*RVKHKL
Trigger: TAGCTTATGCTTAACTCTCCAAAAATCTTCTGGCCT...TTGTTCCAAACATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CCA 90 bp GAATGGAATTGTACACTCAAGATATTTCCTTGGGAAATGTCATGTTTGGAACAAACTTTGAGGTTTAACTaGGCAATTGTAGTCTTAACT +
Preference number: 2 (lower is better)
Translates to: EWNCTLKIFPWEMSCLEQTLRFN*AIVVLT
Trigger: AGTTAAGACTACAATTGCCCAGTTAAACCTCAAAGT...TTGTTCCAAACATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 72 bp CACTGCCGTGGTGTCCTGCCCACCTCGGAGTGGTGGTaGGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTA +
Preference number: 3 (lower is better)
Translates to: HCRGVLPTSEWW*ARRSRVFTARL
Trigger: TAGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTGGGCAGGACACCACGGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 72 bp CTTCACCCAGAAGCAGGGTTCACTGCCGTGGTGTCCTaGCCACCTCGGAGTGGTGGTGAGCCAGGAGAAGCA +
Preference number: 3 (lower is better)
Translates to: LHPEAGFTAVVS*PPRSGGEPGEA
Trigger: TGCTTCTCCTGGCTCACCACCACTCCGAGGTGGGCAGGACACCACGGCAGTGAACCCTGCTTCTGGGTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CCA 72 bp CGACCCGGCCTTCACTGCGCGTGCTTACTGCATATTTaGGGTGGAACTGTAAGGCGTGGGGAAGGTGGCCTG +
Preference number: 3 (lower is better)
Translates to: RPGLHCACLLHI*GGTVRRGEGGL
Trigger: CAGGCCACCTTCCCCACGCCTTACAGTTCCACCCCAAATATGCAGTAAGCACGCGCAGTGAAGGCCGGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 72 bp TCCGAAGGCTCCTCCCGACCCGGCCTTCACTGCGCGTaGTTACTGCATATTTGGGGTGGAACTGTAAGGCGT +
Preference number: 3 (lower is better)
Translates to: SEGSSRPGLHCA*LLHIWGGTVRR
Trigger: ACGCCTTACAGTTCCACCCCAAATATGCAGTAAGCACGCGCAGTGAAGGCCGGGTCGGGAGGAGCCTTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CAA 90 bp GCCCACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTTTCACATTCCATGCATaGTCTAGCGGGTTAAGCCCC +
Preference number: 3 (lower is better)
Translates to: AHLGVVVSQEKQGLYCTAFTFHA*SSGLSP
Trigger: GGGGCTTAACCCGCTAGACAATGCATGGAATGTGAA...AGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CAA 90 bp GCCCACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTGTGCTTACTGCATATTaGGGGTGGAACTGTAAGGCG +
Preference number: 3 (lower is better)
Translates to: AHLGVVVSQEKQGLYCTAVLTAY*GWNCKA
Trigger: CGCCTTACAGTTCCACCCCAAATATGCAGTAAGCAC...AGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CAA 90 bp TTCCCAGGCACCCTTCCGAGGGGGCTGCTCCTGGAGATGCCACCTAGGTTATGGTACAAGAAGCTACGTTaGAGGACCAGTCATTTGGGC +
Preference number: 3 (lower is better)
Translates to: FPGTLPRGLLLEMPPRLWYKKLR*RTSHLG
Trigger: GCCCAAATGACTGGTCCTCAAACGTAGCTTCTTGTA...CCATAACCTAGGTGGCATCTCCAGGAGCAGCCCCCTCGGAAGGGTGCCTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 72 bp GAAACCTTTCCATTTGATGTCTTAACCCCCGCCCCCTaGCTCTGCTCCAAGCACGGGAAGACAGACAGTCCC +
Preference number: 3 (lower is better)
Translates to: ETFPFDVLTPAP*LCSKHGKTDSP
Trigger: GGGACTGTCTGTCTTCCCGTGCTTGGAGCAGAGGCAGGGGGCGGGGGTTAAGACATCAAATGGAAAGGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CCA 72 bp GGAGGTGAAGCCTCCTTTTTCCTGGAGCATGCTGTGTaGGGAGATCTTGCCTGGGAAAGCGGGTCATCTCAC +
Preference number: 3 (lower is better)
Translates to: GGEASFFLEHAV*GDLAWESGSSH
Trigger: GTGAGATGACCCGCTTTCCCAGGCAAGATCTCCCCACACAGCATGCTCCAGGAAAAAGGAGGCTTCACCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 72 bp ACATCACTCATTTCCCAGGCACCCTTCCGAGGGGGCTaGTCCTGGAGATGCCACCTAGGTTATGGCTACAAA +
Preference number: 3 (lower is better)
Translates to: TSLISQAPFRGG*SWRCHLGYGYK
Trigger: TTTGTAGCCATAACCTAGGTGGCATCTCCAGGAGCAGCCCCCTCGGAAGGGTGCCTGGGAAATGAGTGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 72 bp CTGCAGGGTGGTGTTAGGATGCCAAATAGAATCCCTTaGCACCTGTTTGAGCACGGACACCCTCAGAGTCCG +
Preference number: 3 (lower is better)
Translates to: LQGGVRMPNRIP*HLFEHGHPQSP
Trigger: CGGACTCTGAGGGTGTCCGTGCTCAAACAGGTGGCAAGGGATTCTATTTGGCATCCTAACACCACCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 72 bp AGAAGGGGCTGCTCTCCTCCTGCACCAAATAGTAACTaGGGGTTGTTGCATACAGGTGTGTGTCCCACCCTG +
Preference number: 3 (lower is better)
Translates to: RRGCSPPAPNSN*GLLHTGVCPTL
Trigger: CAGGGTGGGACACACACCTGTATGCAACAACCCGCAGTTACTATTTGGTGCAGGAGGAGAGCAGCCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CAA 90 bp ACCATCCGAAGGCTCCTCCCGACCCGGCCTTCACTGCGCGTGCTTACTGCATATCCCCCATATATAAAGTaGCCCATCAGATTAGGCTAC +
Preference number: 3 (lower is better)
Translates to: TIRRLLPTRPSLRVLTAYPPYIK*PIRLGY
Trigger: GTAGCCTAATCTGATGGGCAACTTTATATATGGGGG...ATATGCAGTAAGCACGCGCAGTGAAGGCCGGGTCGGGAGGAGCCTTCGGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CCA 72 bp CACCTCCCATCTCCCTCTTCTAAAGGCCAGTGGACTTaGGATTCCCCAACTGTCAGGGAACCTTTCCCTAGT +
Preference number: 3 (lower is better)
Translates to: HLPSPSSKGQWT*DSPTVREPFPS
Trigger: ACTAGGGAAAGGTTCCCTGACAGTTGGGGAATCCCAAGTCCACTGGCCTTTAGAAGAGGGAGATGGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 72 bp AGGCTTCAACGGTGGCTGGAATGGCTTGGGGAGAGCTaGGATGAAGATTCAAATTCAGGGCTACCACATGCC +
Preference number: 3 (lower is better)
Translates to: RLQRWLEWLGES*DEDSNSGLPHA
Trigger: GGCATGTGGTAGCCCTGAATTTGAATCTTCATCTCAGCTCTCCCCAAGCCATTCCAGCCACCGTTGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 72 bp GAAGTAAGGCTCTTCCGTCCGAATACGCCATGGACTTaGAGGCACCTTACAGTCCAGGCTGGAGGTTTTCAC +
Preference number: 3 (lower is better)
Translates to: EVRLFRPNTPWT*RHLTVQAGGFH
Trigger: GTGAAAACCTCCAGCCTGGACTGTAAGGTGCCTTCAAGTCCATGGCGTATTCGGACGGAAGAGCCTTACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CCA 72 bp TACGCCATGGACTTGAAGGCACCTTACAGTCCAGGCTaGAGGTTTTCACATCCTGAGAGGGAATGCCTCTCT +
Preference number: 3 (lower is better)
Translates to: YAMDLKAPYSPG*RFSHPERECLS
Trigger: AGAGAGGCATTCCCTCTCAGGATGTGAAAACCTCCAGCCTGGACTGTAAGGTGCCTTCAAGTCCATGGCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CAA 90 bp CCCTCCAACAATACCCTTGTAAGGCAGATGGCTGGATGCCTAAGCACACTGGGAATGTGCCTCACATTATaGCCCAGGTACTCAGAGGCT +
Preference number: 3 (lower is better)
Translates to: PSNNTLVRQMAGCLSTLGMCLTL*PRYSEA
Trigger: AGCCTCTGAGTACCTGGGCAATAATGTGAGGCACAT...TCCCAGTGTGCTTAGGCATCCAGCCATCTGCCTTACAAGGGTATTGTTGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CAA 90 bp CCATACCTGTCGACTATAGCTTTGAGCAGATATACTAGCTGGGGGAGTGGAAGGCCAGATGTCTCTCTCTaGAGAGTTCCTTCCAGAGGG +
Preference number: 3 (lower is better)
Translates to: PYLSTIALSRYTSWGSGRPDVSL*RVPSRG
Trigger: CCCTCTGGAAGGAACTCTCAAGAGAGAGACATCTGG...CCTTCCACTCCCCCAGCTAGTATATCTGCTCAAAGCTATAGTCGACAGGTATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 72 bp TCAACGGTGGCTGGAATGGCTTGGGGAGAGCTGAGATaGAGATTCAAATTCAGGGCTACCACATGCCTAAGC +
Preference number: 3 (lower is better)
Translates to: STVAGMAWGELR*RFKFRATTCLS
Trigger: GCTTAGGCATGTGGTAGCCCTGAATTTGAATCTTCATCTCAGCTCTCCCCAAGCCATTCCAGCCACCGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 72 bp ATTCCCCAACTGTCAGGGAACCTTTCCCTAGTGGCCTaGAGCACCCTCTTCCAGCAAAGAAGGAAACAACAA +
Preference number: 3 (lower is better)
Translates to: IPQLSGNLSLVA*STLFQQRRKQQ
Trigger: TTGTTGTTTCCTTCTTTGCTGGAAGAGGGTGCTGCAGGCCACTAGGGAAAGGTTCCCTGACAGTTGGGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 72 bp AATGTACTACTCAAAATATCCCACGGCACGCAGAGCTaGCGTCAAAAGCTGCAGGGTGGTGTTAGGATGCCA +
Preference number: 3 (lower is better)
Translates to: NVLLKISHGTQS*RQKLQGGVRMP
Trigger: TGGCATCCTAACACCACCCTGCAGCTTTTGACGGCAGCTCTGCGTGCCGTGGGATATTTTGAGTAGTACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 72 bp TATGGTTGCTATGGTGACACTCCAGCCAGGGAAATGTaGCTCACATTATTGCCCAGGTACTCAGAGGCTTGG +
Preference number: 3 (lower is better)
Translates to: YGCYGDTPAREM*LTLLPRYSEAW
Trigger: CCAAGCCTCTGAGTACCTGGGCAATAATGTGAGGCACATTTCCCTGGCTGGAGTGTCACCATAGCAACCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CAA 90 bp CCATACCTGTCGACTATAGCTTTGAGCAGATATACTAGCTGGGGGAGTGGAAGGAACACACTCAGGGCATaGGTTCCTCCAGGGAATTGT +
Preference number: 3 (lower is better)
Translates to: PYLSTIALSRYTSWGSGRNTLRA*VPPGNC
Trigger: ACAATTCCCTGGAGGAACCAATGCCCTGAGTGTGTT...CCTTCCACTCCCCCAGCTAGTATATCTGCTCAAAGCTATAGTCGACAGGTATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 72 bp TTGTCTAGCGGGTTAAGCCCCGGGTTTGTGTCTTTGTaGCCATTTCCCAACAGAGAAAGCTCCATTCTTTCG +
Preference number: 3 (lower is better)
Translates to: LSSGLSPGFVSL*PFPNRESSILS
Trigger: CGAAAGAATGGAGCTTTCTCTGTTGGGAAATGGGCACAAAGACACAAACCCGGGGCTTAACCCGCTAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CCA 72 bp CAGTCCCTCCAACAATACCCTTGTAAGGCAGATGGCTaGATGCCTAAGCACACTGGGAATCCTTTTAGGAAC +
Preference number: 3 (lower is better)
Translates to: QSLQQYPCKADG*MPKHTGNPFRN
Trigger: GTTCCTAAAAGGATTCCCAGTGTGCTTAGGCATCCAGCCATCTGCCTTACAAGGGTATTGTTGGAGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 72 bp ACCCACCCTCCACCTTCCCTCCGTTCTGTTCATCCATaGTTTGCAGCAAAGTGGGAAAAGAATATGCTGTTC +
Preference number: 3 (lower is better)
Translates to: THPPPSLRSVHP*FAAKWEKNMLF
Trigger: GAACAGCATATTCTTTTCCCACTTTGCTGCAAATCATGGATGAACAGAACGGAGGGAAGGTGGAGGGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 72 bp TCTCACGTTCATGGATTCTTCCAGATGTCTCTCTCTTaGGAGTTCCTTCCAGAGGGGGTGTCCCAATTCAAC +
Preference number: 3 (lower is better)
Translates to: SHVHGFFQMSLS*EFLPEGVSQFN
Trigger: GTTGAATTGGGACACCCCCTCTGGAAGGAACTCTCAAGAGAGAGACATCTGGAAGAATCCATGAACGTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 72 bp CCCTCCACCTTCCCTCCGTTCTGTTCATCCATGATTTaGAGCAAAGTGGGAAAAGAATATGCTGTTCTCCCA +
Preference number: 3 (lower is better)
Translates to: PSTFPPFCSSMI*SKVGKEYAVLP
Trigger: TGGGAGAACAGCATATTCTTTTCCCACTTTGCTGCAAATCATGGATGAACAGAACGGAGGGAAGGTGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CCA 72 bp CACTCTGGACAGTTATGTAGCCCCGTACTTTCTCCCTaGGCTATTTATGGAACGTGTATGGCCAGTGGAAAA +
Preference number: 3 (lower is better)
Translates to: HSGQLCSPVLSP*AIYGTCMASGK
Trigger: TTTTCCACTGGCCATACACGTTCCATAAATAGCCCAGGGAGAAAGTACGGGGCTACATAACTGTCCAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CAA 90 bp CCCTCCAACAATACCCTTGTAAGGCAGATGGCTGGATGCCTAAGCACACTGGGAGCAAAGGATAAGACATaGACATTCATCAGGAGTCAT +
Preference number: 3 (lower is better)
Translates to: PSNNTLVRQMAGCLSTLGAKDKT*TFIRSH
Trigger: ATGACTCCTGATGAATGTCAATGTCTTATCCTTTGC...TCCCAGTGTGCTTAGGCATCCAGCCATCTGCCTTACAAGGGTATTGTTGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CAA 90 bp CCATACCTGTCGACTATAGCTTTGAGCAGATATACTAGCTGGGGGAGTGGAAGGCTGTTCATCCATGATTaGCAGCAAAGTGGGAAAAGA +
Preference number: 3 (lower is better)
Translates to: PYLSTIALSRYTSWGSGRLFIHD*QQSGKR
Trigger: TCTTTTCCCACTTTGCTGCAAATCATGGATGAACAG...CCTTCCACTCCCCCAGCTAGTATATCTGCTCAAAGCTATAGTCGACAGGTATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CAA 90 bp CCCTCCAACAATACCCTTGTAAGGCAGATGGCTGGATGCCTAAGCACACTGGGAACTCAAGATATTTCCTaGGGAAATGTCATGTTTGGA +
Preference number: 3 (lower is better)
Translates to: PSNNTLVRQMAGCLSTLGTQDIS*GNVMFG
Trigger: TCCAAACATGACATTTCCCAAGGAAATATCTTGAGT...TCCCAGTGTGCTTAGGCATCCAGCCATCTGCCTTACAAGGGTATTGTTGGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 72 bp GAGAGGACCCGGAAGATCTCCAACAAAAACCTAAAGTaGCAAACTCTGGGTGTTAGTGCCTGTTCTCACGTT +
Preference number: 3 (lower is better)
Translates to: ERTRKISNKNLK*QTLGVSACSHV
Trigger: AACGTGAGAACAGGCACTAACACCCAGAGTTTGTCACTTTAGGTTTTTGTTGGAGATCTTCCGGGTCCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 72 bp CCATGCAACATAGTCCTGCAGAGTAATAGACACAGCTaGGCACACAGCTGTCCCTGCTTTCACTATCAGTTT +
Preference number: 3 (lower is better)
Translates to: PCNIVLQSNRHS*AHSCPCFHYQF
Trigger: AAACTGATAGTGAAAGCAGGGACAGCTGTGTGCTCAGCTGTGTCTATTACTCTGCAGGACTATGTTGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 72 bp AACTCTCCAAACACCTGCCTGAGTGGAATCTTGCTTTaGCTTCACTACACTGTCTGTTGTAGGCACTCTGAG +
Preference number: 3 (lower is better)
Translates to: NSPNTCLSGILL*LHYTVCCRHSE
Trigger: CTCAGAGTGCCTACAACAGACAGTGTAGTGAAGTCAAAGCAAGATTCCACTCAGGCAGGTGTTTGGAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CCA 72 bp GAATCTGGGAACATGTTCCCTAACTCTGCAAGGATTTaGGGTGACTACCAATCATTTCCACAGCCTGGATTC +
Preference number: 3 (lower is better)
Translates to: ESGNMFPNSARI*GDYQSFPQPGF
Trigger: GAATCCAGGCTGTGGAAATGATTGGTAGTCACCCCAAATCCTTGCAGAGTTAGGGAACATGTTCCCAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CCA 72 bp AAGCGTCTCTGTTACATTCCGAAGCTTAACACAGGGTaGGGGACAGGTACTTCTAAAAGCTTAAAGAAGGGG +
Preference number: 3 (lower is better)
Translates to: KRLCYIPKLNTG*GTGTSKSLKKG
Trigger: CCCCTTCTTTAAGCTTTTAGAAGTACCTGTCCCCCACCCTGTGTTAAGCTTCGGAATGTAACAGAGACGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 72 bp GCGGGTCATCTCACTGGCTCGTGCATCATAATCACTTaGAAACGATCCGGGTATGATTTTTATCCTCAAGTG +
Preference number: 3 (lower is better)
Translates to: AGHLTGSCIIIT*KRSGYDFYPQV
Trigger: CACTTGAGGATAAAAATCATACCCGGATCGTTTTCAAGTGATTATGATGCACGAGCCAGTGAGATGACCCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CCA 72 bp AGCATCTCTGATCGGGAATGGTGTATGTGGTGTATCTaGGAACAGGAAGGGAAGCCAATCCTCTTTTCAATT +
Preference number: 3 (lower is better)
Translates to: SISDREWCMWCI*EQEGKPILFSI
Trigger: AATTGAAAAGAGGATTGGCTTCCCTTCCTGTTCCCAGATACACCACATACACCATTCCCGATCAGAGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 72 bp AGAATATGCTGTTCTCCCAGTACAAGAAGCTACGTTTaGGGACCAGTCATTTGGGCATTGCTTCAAAAGGCA +
Preference number: 3 (lower is better)
Translates to: RICCSPSTRSYV*GPVIWALLQKA
Trigger: TGCCTTTTGAAGCAATGCCCAAATGACTGGTCCTCAAACGTAGCTTCTTGTACTGGGAGAACAGCATATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 72 bp AAGCAGCTTGCCCTAAGGTCCAGTTCACGTGTGCAATaGAGAAGGCTGCAAAAATCAAAACTATGTGACAAA +
Preference number: 3 (lower is better)
Translates to: KQLALRSSSRVQ*RRLQKSKLCDK
Trigger: TTTGTCACATAGTTTTGATTTTTGCAGCCTTCTGCATTGCACACGTGAACTGGACCTTAGGGCAAGCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 72 bp CACAGCTGTCCCTGCTTTCACTATCAGTTTGAAGACTaGATTCTGTCACCTTCAGCCAATGATAAAACCCTT +
Preference number: 3 (lower is better)
Translates to: HSCPCFHYQFED*ILSPSANDKTL
Trigger: AAGGGTTTTATCATTGGCTGAAGGTGACAGAATTCAGTCTTCAAACTGATAGTGAAAGCAGGGACAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 72 bp GAACACACTCAGGGCATTGGTTCCTCCAGGGAATTGTaGCAAGGTTCTCTATTTACAAATACAATAGCAATT +
Preference number: 3 (lower is better)
Translates to: EHTQGIGSSREL*QGSLFTNTIAI
Trigger: AATTGCTATTGTATTTGTAAATAGAGAACCTTGGCACAATTCCCTGGAGGAACCAATGCCCTGAGTGTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CAA 90 bp GATTCGGCTTCACTGAGTAACAGCACTGGTAGTAAGCACACTATCAACTTCTGTGACTGCCTTTTAAAATaGAAGCAAGGATACATGTGT +
Preference number: 3 (lower is better)
Translates to: DSASLSNSTGSKHTINFCDCLLK*KQGYMC
Trigger: ACACATGTATCCTTGCTTCAATTTTAAAAGGCAGTC...ACAGAAGTTGATAGTGTGCTTACTACCAGTGCTGTTACTCAGTGAAGCCGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CAA 90 bp AGTCTGAAGGACTTTTACCAAGAAGTGTGGCGAATATTTAAATATACTGCTGTTTTGAGGACCAGTCATTaGGGCATTGCTTCAAAAGGC +
Preference number: 3 (lower is better)
Translates to: SLKDFYQEVWRIFKYTAVLRTSH*GIASKG
Trigger: GCCTTTTGAAGCAATGCCCAAATGACTGGTCCTCAA...AACAGCAGTATATTTAAATATTCGCCACACTTCTTGGTAAAAGTCCTTCAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR GCA 72 bp CAAGAAGCTACGTTTGAGGACCAGTCATTTGGGCATTaGTTCAAAAGGCACATTTATTTTAGTGGCAACTTA +
Preference number: 3 (lower is better)
Translates to: QEATFEDQSFGH*FKRHIYFSGNL
Trigger: TAAGTTGCCACTAAAATAAATGTGCCTTTTGAAGCAATGCCCAAATGACTGGTCCTCAAACGTAGCTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CAA 90 bp AGTCTGAAGGACTTTTACCAAGAAGTGTGGCGAATATTTAAATATACTGCTGTTCCAGTCATTTGGGCATaGCTTCAAAAGGCACATTTA +
Preference number: 3 (lower is better)
Translates to: SLKDFYQEVWRIFKYTAVPVIWA*LQKAHL
Trigger: TAAATGTGCCTTTTGAAGCAATGCCCAAATGACTGG...AACAGCAGTATATTTAAATATTCGCCACACTTCTTGGTAAAAGTCCTTCAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CAA 90 bp AATGACTTAAAATGTCCTTCACAATTAGCCTCTAATGCCTTTTTGACCTATGCCTTACTGCCGAATAGATaGTATGAAGATAGCGAATCC +
Preference number: 3 (lower is better)
Translates to: NDLKCPSQLASNAFLTYALLPNR*YEDSES
Trigger: GGATTCGCTATCTTCATACAATCTATTCGGCAGTAA...GGCATAGGTCAAAAAGGCATTAGAGGCTAATTGTGAAGGACATTTTAAGTCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 72 bp GCACCCTCTTCCAGCAAAGAAGGAAACAACAAAACTTaGAAACAAACCAACAATAACAACAACAACAACAGA +
Preference number: 3 (lower is better)
Translates to: APSSSKEGNNKT*KQTNNNNNNNR
Trigger: TCTGTTGTTGTTGTTGTTATTGTTGGTTTGTTTTCAAGTTTTGTTGTTTCCTTCTTTGCTGGAAGAGGGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR TCA 72 bp ATTACACACAATATATCCAATCAGCATCTGTATACTTaGCCATGCAACATAGTCCTGCAGAGTAATAGACAC +
Preference number: 3 (lower is better)
Translates to: ITHNISNQHLYT*PCNIVLQSNRH
Trigger: GTGTCTATTACTCTGCAGGACTATGTTGCATGGTCAAGTATACAGATGCTGATTGGATATATTGTGTGTAAT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR-3UTR CAA 90 bp AGAATGGAATTGTACACTCAAGATATTTCCTTGGGAAATGTCATGTTTGGAACAGCTTTCACTATCAGTTaGAAGACTGAATTCTGTCAC +
Preference number: 3 (lower is better)
Translates to: RMELYTQDISLGNVMFGTAFTIS*KTEFCH
Trigger: GTGACAGAATTCAGTCTTCAAACTGATAGTGAAAGC...TGTTCCAAACATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR GCA 90 bp GCCCACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTAGGCAGCTGAACACGTaGGCCGTGCAGCTCATGGCG +
Preference number: 4 (lower is better)
Translates to: AHLGVVVSQEKQGLYCTARQLNT*AVQLMA
Trigger: CGCCATGAGCTGCACGGCGCACGTGTTCAGCTGCCT...AGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR GCA 90 bp GCCCACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTCAGCCCAGGCGCTGCTaGACATACGGCGTCATGACC +
Preference number: 4 (lower is better)
Translates to: AHLGVVVSQEKQGLYCTAQPRRC*TYGVMT
Trigger: GGTCATGACGCCGTATGTGCAGCAGCGCCTGGGCTG...AGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR GCA 90 bp TTCCCAGGCACCCTTCCGAGGGGGCTGCTCCTGGAGATGCCACCTAGGTTATGGAGAGACCCGGCTGGATaGGCTCAGGGATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: FPGTLPRGLLLEMPPRLWRDPAG*AQGSCS
Trigger: TGAGCAAGATCCCTGAGCGCATCCAGCCGGGTCTCT...CCATAACCTAGGTGGCATCTCCAGGAGCAGCCCCCTCGGAAGGGTGCCTGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR CCA 90 bp CACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTAAAGGCAGCAGCCAGGGGTaGTGGAAGGGCACATCGCTG +
Preference number: 4 (lower is better)
Translates to: HLGVVVSQEKQGLYCTAKGSSQG*WKGTSL
Trigger: CAGCGATGTGCCCTTCCACCACCCCTGGCTGCTGCC...TTTAGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 72 bp CCGACCCGGCCTTCACTGCGCGTGCTTACTGCATATTaGGGGTGGAACTGTAAGGCGTGGGGAAGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PTRPSLRVLTAY*GWNCKAWGRWP
Trigger: AGGCCACCTTCCCCACGCCTTACAGTTCCACCCCAAATATGCAGTAAGCACGCGCAGTGAAGGCCGGGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR CCA 90 bp ACCATCCGAAGGCTCCTCCCGACCCGGCCTTCACTGCGCGTGCTTACTGCATATCCAGCAGGCTCAGGCTaGGCAGCAGGTAGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: TIRRLLPTRPSLRVLTAYPAGSG*AAGSSS
Trigger: ACTACTACTACCTGCTGCCCAGCCTGAGCCTGCTGG...ATATGCAGTAAGCACGCGCAGTGAAGGCCGGGTCGGGAGGAGCCTTCGGATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR GCA 90 bp AGTGAACACACTCAGGGCATTGGTTCCTCCAGGGAATTGTGCCAAGGTTCTCTAGAGGCCAGGCACTCTTaGGCGGTGCACGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SEHTQGIGSSRELCQGSLEARHS*AVHGSR
Trigger: GCGGCTGCCGTGCACCGCGCAAGAGTGCCTGGCCTC...TAGAGAACCTTGGCACAATTCCCTGGAGGAACCAATGCCCTGAGTGTGTTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR GCA 90 bp GCCACTCTGGACAGTTATGTAGCCCCGTACTTTCTCCCTGGGCTATTTATGGAACGGGTGCAGTCCACGTaGCAGCCCAGGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ATLDSYVAPYFLPGLFMERVQST*QPRRCC
Trigger: GCAGCAGCGCCTGGGCTGGCACGTGGACTGCACCCG...TTCCATAAATAGCCCAGGGAGAAAGTACGGGGCTACATAACTGTCCAGAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR GCA 90 bp GAGCAGCTGTTCCACGTTGGCTGTCTGAATCCAATTCTCTCTCTCTCTCGTTATGGGCGCGGCAGGGGGTaGCTGGAGGAACTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: EQLFHVGCLNPILSLSRYGRGRG*LEELAQ
Trigger: CTGCGCCAGTTCCTCCAGGCACCCCCTGCCGCGCCC...ATAACGAGAGAGAGAGAGAATTGGATTCAGACAGCCAACGTGGAACAGCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR TCA 90 bp CACCTCGGAGTGGTGGTGAGCCAGGAGAAGCAGGGTCTTTACTGCACGGCTAAAGATGGCTGTGGCCAATaGTGTCGAAGAGACCCGGCT +
Preference number: 4 (lower is better)
Translates to: HLGVVVSQEKQGLYCTAKDGCGQ*CRRDPA
Trigger: AGCCGGGTCTCTTCGACATCATTGGCCACAGCCATC...TTTAGCCGTGCAGTAAAGACCCTGCTTCTCCTGGCTCACCACCACTCCGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 72 bp CCTCCTTTTTCCTGGAGCATGCTGTGTGGGGAGATCTaGCCTGGGAAAGCGGGTCATCTCACTGGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: PPFSWSMLCGEI*PGKAGHLTGSC
Trigger: GCACGAGCCAGTGAGATGACCCGCTTTCCCAGGCAAGATCTCCCCACACAGCATGCTCCAGGAAAAAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR CCA 90 bp GATTCGGCTTCACTGAGTAACAGCACTGGTAGTAAGCACACTATCAACTTCTGTGCGGCAGGGGGTGCCTaGAGGAACTGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: DSASLSNSTGSKHTINFCAAGGA*RNWRRP
Trigger: GGGCCTGCGCCAGTTCCTCCAGGCACCCCCTGCCGC...ACAGAAGTTGATAGTGTGCTTACTACCAGTGCTGTTACTCAGTGAAGCCGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR GCA 90 bp CCCTCCAACAATACCCTTGTAAGGCAGATGGCTGGATGCCTAAGCACACTGGGAAGCAGCGGGATGAAGTaGGTCCAGAAGTTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: PSNNTLVRQMAGCLSTLGSSGMK*VQKLSV
Trigger: GACGCTCAACTTCTGGACGCACTTCATCCCGCTGCT...TCCCAGTGTGCTTAGGCATCCAGCCATCTGCCTTACAAGGGTATTGTTGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR TCA 90 bp GAGCAGCTGTTCCACGTTGGCTGTCTGAATCCAATTCTCTCTCTCTCTCGTTATGGCGGCAGAACTTACTaGGGAACAGCAGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: EQLFHVGCLNPILSLSRYGGRTY*GTAAAG
Trigger: TCCCGCTGCTGCTGTTCCTCAGTAAGTTCTGCCGCC...ATAACGAGAGAGAGAGAGAATTGGATTCAGACAGCCAACGTGGAACAGCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR CCA 90 bp AGATTCAAATTCAGGGCTACCACATGCCTAAGCAAAAGGAAGAACCGCAACAGAGCGCCGTGCAGCTCATaGCGAAGGTCAGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: RFKFRATTCLSKRKNRNRAPCSS*RRSAAP
Trigger: GGGTGCTGCTGACCTTCGCCATGAGCTGCACGGCGC...TCTGTTGCGGTTCTTCCTTTTGCTTAGGCATGTGGTAGCCCTGAATTTGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR TCA 90 bp AGGCACTCTGAGCAAACCACTCTTCGAAATGATGTGGACGCCATAACCTTCCAGGGTAGCCGGACAGGATaGAGCACTCCACGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: RHSEQTTLRNDVDAITFQGSRTG*STPRSH
Trigger: ATGACTTCGTGGAGTGCTTCATCCTGTCCGGCTACC...CTGGAAGGTTATGGCGTCCACATCATTTCGAAGAGTGGTTTGCTCAGAGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR GCA 90 bp GATTCGGCTTCACTGAGTAACAGCACTGGTAGTAAGCACACTATCAACTTCTGTTGCCAGCCCAGGCGCTaGTGCACATACGGCGTCATG +
Preference number: 4 (lower is better)
Translates to: DSASLSNSTGSKHTINFCCQPRR*CTYGVM
Trigger: CATGACGCCGTATGTGCAGCAGCGCCTGGGCTGGCA...ACAGAAGTTGATAGTGTGCTTACTACCAGTGCTGTTACTCAGTGAAGCCGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR GCA 90 bp GAGCAGCTGTTCCACGTTGGCTGTCTGAATCCAATTCTCTCTCTCTCTCGTTATAGGAGCACCAGTCGGTaGGGCTCTTACAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: EQLFHVGCLNPILSLSRYRSTSR*GSYSKP
Trigger: TGGCTTGCTGTAAGAGCCGCACCGACTGGTGCTCCT...ATAACGAGAGAGAGAGAGAATTGGATTCAGACAGCCAACGTGGAACAGCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR CCA 90 bp GAGCAGCTGTTCCACGTTGGCTGTCTGAATCCAATTCTCTCTCTCTCTCGTTATTCGAAGAGACCCGGCTaGATGCGCTCAGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: EQLFHVGCLNPILSLSRYSKRPG*MRSGIL
Trigger: CAAGATCCCTGAGCGCATCCAGCCGGGTCTCTTCGA...ATAACGAGAGAGAGAGAGAATTGGATTCAGACAGCCAACGTGGAACAGCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR GCA 90 bp GAATGGAATTGTACACTCAAGATATTTCCTTGGGAAATGTCATGTTTGGAACAAGAGGCGGAGGCGGGATaGGAGCGCCGGGAGGTCGAG +
Preference number: 4 (lower is better)
Translates to: EWNCTLKIFPWEMSCLEQEAEAG*ERREVE
Trigger: CTCGACCTCCCGGCGCTCGCATCCCGCCTCCGCCTC...TTGTTCCAAACATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR TCA 90 bp GAGCAGCTGTTCCACGTTGGCTGTCTGAATCCAATTCTCTCTCTCTCTCGTTATCGAAGCCATAGTAGCTaGTGGAAGCGTAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EQLFHVGCLNPILSLSRYRSHSS*WKRSPG
Trigger: ACCTGGACTACGCTTCCATCAGCTACTATGGCTTCG...ATAACGAGAGAGAGAGAGAATTGGATTCAGACAGCCAACGTGGAACAGCTGCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR TCA 90 bp GATTCGGCTTCACTGAGTAACAGCACTGGTAGTAAGCACACTATCAACTTCTGTGGATCTTGCTCACGTTaGAGAAGGCGGCCACCACCA +
Preference number: 4 (lower is better)
Translates to: DSASLSNSTGSKHTINFCGSCSR*RRRPPP
Trigger: TGGTGGTGGCCGCCTTCTTCAACGTGAGCAAGATCC...ACAGAAGTTGATAGTGTGCTTACTACCAGTGCTGTTACTCAGTGAAGCCGAATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR CCA 90 bp AGAATGGAATTGTACACTCAAGATATTTCCTTGGGAAATGTCATGTTTGGAACACTGTGCCCGAGAAGGTaGGCGCGGCAGGGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: RMELYTQDISLGNVMFGTLCPRR*ARQGVP
Trigger: AGGCACCCCCTGCCGCGCCCACCTTCTCGGGCACAG...TGTTCCAAACATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 72 bp GCATTGTCTAGCGGGTTAAGCCCCGGGTTTGTGTCTTaGTGCCCATTTCCCAACAGAGAAAGCTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: ALSSGLSPGFVS*CPFPNRESSIL
Trigger: AAGAATGGAGCTTTCTCTGTTGGGAAATGGGCACAAAGACACAAACCCGGGGCTTAACCCGCTAGACAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 72 bp GTGTTAGGATGCCAAATAGAATCCCTTGCCACCTGTTaGAGCACGGACACCCTCAGAGTCCGAAAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: VLGCQIESLATC*STDTLRVRKLF
Trigger: GAAAAGCTTTCGGACTCTGAGGGTGTCCGTGCTCAAACAGGTGGCAAGGGATTCTATTTGGCATCCTAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR TCA 90 bp AGATTCAAATTCAGGGCTACCACATGCCTAAGCAAAAGGAAGAACCGCAACAGAAGTGCGTCCAGAAGTTaGGCGTCTCATTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: RFKFRATTCLSKRKNRNRSASRS*ASHWWA
Trigger: AGCCCACCAATGAGACGCTCAACTTCTGGACGCACT...TCTGTTGCGGTTCTTCCTTTTGCTTAGGCATGTGGTAGCCCTGAATTTGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR TCA 90 bp TATTTTGAACTGTTAAATGCAATCAAACCTAGTGGATGTGGTGAAATGGAGAAGGCAGCGACAGGCAGCTaGACACGTGCGCCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: YFELLNAIKPSGCGEMEKAATGS*TRAPCS
Trigger: GCTGCACGGCGCACGTGTTCAGCTGCCTGTCGCTGC...CTTCTCCATTTCACCACATCCACTAGGTTTGATTGCATTTAACAGTTCAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR TCA 90 bp GAATGGAATTGTACACTCAAGATATTTCCTTGGGAAATGTCATGTTTGGAACAACGCGGTAGACCGCGATaGGGCGGGTGCAGTCCACGT +
Preference number: 4 (lower is better)
Translates to: EWNCTLKIFPWEMSCLEQRGRPR*GGCSPR
Trigger: ACGTGGACTGCACCCGCCTCATCGCGGTCTACCGCG...TTGTTCCAAACATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 72 bp AATGTGCCTCACATTATTGCCCAGGTACTCAGAGGCTaGGTTAGAATGATTTTCCTCGTGGCCCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: NVPHIIAQVLRG*VRMIFLVAPGK
Trigger: CTTTCCTGGGGCCACGAGGAAAATCATTCTAACCAAGCCTCTGAGTACCTGGGCAATAATGTGAGGCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR CCA 90 bp AGAATGGAATTGTACACTCAAGATATTTCCTTGGGAAATGTCATGTTTGGAACAGGTGCCTGGAGGAACTaGCGCAGGCCCTCTTCCACG +
Preference number: 4 (lower is better)
Translates to: RMELYTQDISLGNVMFGTGAWRN*RRPSST
Trigger: CGTGGAAGAGGGCCTGCGCCAGTTCCTCCAGGCACC...TGTTCCAAACATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 72 bp TTCTCACGTTCATGGATTCTTCCAGATGTCTCTCTCTaGAGAGTTCCTTCCAGAGGGGGTGTCCCAATTCAA +
Preference number: 4 (lower is better)
Translates to: FSRSWILPDVSL*RVPSRGGVPIQ
Trigger: TTGAATTGGGACACCCCCTCTGGAAGGAACTCTCAAGAGAGAGACATCTGGAAGAATCCATGAACGTGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 72 bp ACAGAGAAAGCTCCATTCTTTCGACAAATCCAAGCATaGCTAGACCTCAGAAGCAGCCAGGGGTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: TEKAPFFRQIQA*LDLRSSQGFVF
Trigger: AAACACAAACCCCTGGCTGCTTCTGAGGTCTAGCAATGCTTGGATTTGTCGAAAGAATGGAGCTTTCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 72 bp TTTAACTTCTGTGTGCAAGTGAACACACTCAGGGCATaGGTTCCTCCAGGGAATTGTGCCAAGGTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: FNFCVQVNTLRA*VPPGNCAKVLY
Trigger: ATAGAGAACCTTGGCACAATTCCCTGGAGGAACCAATGCCCTGAGTGTGTTCACTTGCACACAGAAGTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 72 bp AATCCTTTTAGGAACCTGTTGTCTTCAAGGCTGGTTTaGTGGAGAGTAAAGGCTTCAACGGTGGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: NPFRNLLSSRLV*WRVKASTVAGM
Trigger: CATTCCAGCCACCGTTGAAGCCTTTACTCTCCACAAAACCAGCCTTGAAGACAACAGGTTCCTAAAAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 72 bp ATGCCTAAGCACACTGGGAATCCTTTTAGGAACCTGTaGTCTTCAAGGCTGGTTTTGTGGAGAGTAAAGGCT +
Preference number: 4 (lower is better)
Translates to: MPKHTGNPFRNL*SSRLVLWRVKA
Trigger: AGCCTTTACTCTCCACAAAACCAGCCTTGAAGACAACAGGTTCCTAAAAGGATTCCCAGTGTGCTTAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR CCA 90 bp AGTCTGAAGGACTTTTACCAAGAAGTGTGGCGAATATTTAAATATACTGCTGTTAGTGCACGAAGAGTGTaGGGTTCTCGCCTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: SLKDFYQEVWRIFKYTAVSARRV*GSRLAG
Trigger: ACCTGCGAGGCGAGAACCCCACACTCTTCGTGCACT...AACAGCAGTATATTTAAATATTCGCCACACTTCTTGGTAAAAGTCCTTCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 72 bp AAGAATATGCTGTTCTCCCAGTACAAGAAGCTACGTTaGAGGACCAGTCATTTGGGCATTGCTTCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: KNMLFSQYKKLR*RTSHLGIASKG
Trigger: GCCTTTTGAAGCAATGCCCAAATGACTGGTCCTCAAACGTAGCTTCTTGTACTGGGAGAACAGCATATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR GCA 90 bp AGTCTGAAGGACTTTTACCAAGAAGTGTGGCGAATATTTAAATATACTGCTGTTAGTAGTAGGCCACGGTaGTGCCGAAGCCATAGTAGC +
Preference number: 4 (lower is better)
Translates to: SLKDFYQEVWRIFKYTAVSSRPR*CRSHSS
Trigger: GCTACTATGGCTTCGGCAGCACCGTGGCCTACTACT...AACAGCAGTATATTTAAATATTCGCCACACTTCTTGGTAAAAGTCCTTCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 72 bp AAAAAGCAACTTCAACCATACCTGTCGACTATAGCTTaGAGCAGATATACTAGCTGGGGGAGTGGAAGGTTA +
Preference number: 4 (lower is better)
Translates to: KKQLQPYLSTIA*SRYTSWGSGRL
Trigger: TAACCTTCCACTCCCCCAGCTAGTATATCTGCTCAAAGCTATAGTCGACAGGTATGGTTGAAGTTGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 72 bp AGGTGGCCTGCCACTTTTCCACATTCGAGAATGGAATaGTACACTCAAGATATTTCCTTGGGAAATGTCATG +
Preference number: 4 (lower is better)
Translates to: RWPATFPHSRME*YTQDISLGNVM
Trigger: CATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTCTCGAATGTGGAAAAGTGGCAGGCCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 72 bp CTCAGACCCATCACTCAATCAGAAAAACTTACCAGTTaGATATTCTTAGCAATAGTTCCCCCATATATAAAG +
Preference number: 4 (lower is better)
Translates to: LRPITQSEKLTS*IFLAIVPPYIK
Trigger: CTTTATATATGGGGGAACTATTGCTAAGAATATCAAACTGGTAAGTTTTTCTGATTGAGTGATGGGTCTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
3UTR CAA 72 bp ATTTACAGTTTGAAAGATCCAAGAGGTCTTTATCATTaGGGTAAGAGCTCAAAGATGAGGCTTTTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: IYSLKDPRGLYH*GKSSKMRLLKK
Trigger: CTTTTTCAAAAGCCTCATCTTTGAGCTCTTACCCAAATGATAAAGACCTCTTGGATCTTTCAAACTGTAAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS TCA 90 bp CCAGCACGAAGGCCACGGGCAGCACGAGCGCGCGGTAGACCGCGATaGGGCGGGTGCAGTCCACGTGCCAGCCCAGGCGCTGCTGCACAT +
Preference number: 5 (lower is better)
Translates to: PARRPRAARARGRPR*GGCSPRASPGAAAH
Trigger: ATGTGCAGCAGCGCCTGGGCTGGCACGTGGACTGCACCCGCCTCATCGCGGTCTACCGCGCGCTCGTGCTGCCCGTGGCCTTCGTGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS GCA 90 bp ACCGCGATGAGGCGGGTGCAGTCCACGTGCCAGCCCAGGCGCTGCTaGACATACGGCGTCATGACCCTGGCGTCCAGCAGGCTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: TAMRRVQSTCQPRRC*TYGVMTLASSRLRL
Trigger: CAGCCTGAGCCTGCTGGACGCCAGGGTCATGACGCCGTATGTGCAGCAGCGCCTGGGCTGGCACGTGGACTGCACCCGCCTCATCGCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS GCA 90 bp ACGGGTAGGAGCACCAGTCGGTGCGGCTCTTACAGCAAGCCACGGTaGAGGCCACAGCCAGCACGAAGGCCACGGGCAGCACGAGCGCGC +
Preference number: 5 (lower is better)
Translates to: TGRSTSRCGSYSKPR*RPQPARRPRAARAR
Trigger: GCGCGCTCGTGCTGCCCGTGGCCTTCGTGCTGGCTGTGGCCTGCACCGTGGCTTGCTGTAAGAGCCGCACCGACTGGTGCTCCTACCCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS TCA 90 bp GGCACTCTTGCGCGGTGCACGGCAGCCGCCGGTAGCCGGACAGGATaGAGCACTCCACGAAGTCATCGGGCACCTCGTCCCAGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: GTLARCTAAAGSRTG*STPRSHRAPRPSAA
Trigger: TGCTGCGCTGGGACGAGGTGCCCGATGACTTCGTGGAGTGCTTCATCCTGTCCGGCTACCGGCGGCTGCCGTGCACCGCGCAAGAGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS CCA 90 bp GGCAAACCACCAGCAGCAGCATGTAGCCCACTGTGCCCGAGAAGGTaGGCGCGGCAGGGGGTGCCTGGAGGAACTGGCGCAGGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: GKPPAAACSPLCPRR*ARQGVPGGTGAGPL
Trigger: AAGAGGGCCTGCGCCAGTTCCTCCAGGCACCCCCTGCCGCGCCCACCTTCTCGGGCACAGTGGGCTACATGCTGCTGCTGGTGGTTTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS GCA 90 bp CAGCATGTAGCCCACTGTGCCCGAGAAGGTGGGCGCGGCAGGGGGTaGCTGGAGGAACTGGCGCAGGCCCTCTTCCACGTAGTACACCTG +
Preference number: 5 (lower is better)
Translates to: QHVAHCAREGGRGRG*LEELAQALFHVVHL
Trigger: CAGGTGTACTACGTGGAAGAGGGCCTGCGCCAGTTCCTCCAGGCACCCCCTGCCGCGCCCACCTTCTCGGGCACAGTGGGCTACATGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS GCA 90 bp CGAAGACGAAGGTGCGCAGGGCGAACGGGTAGGAGCACCAGTCGGTaGGGCTCTTACAGCAAGCCACGGTGCAGGCCACAGCCAGCACGA +
Preference number: 5 (lower is better)
Translates to: RRRRCAGRTGRSTSR*GSYSKPRCRPQPAR
Trigger: TCGTGCTGGCTGTGGCCTGCACCGTGGCTTGCTGTAAGAGCCGCACCGACTGGTGCTCCTACCCGTTCGCCCTGCGCACCTTCGTCTTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR CAA 90 bp CCCTCCAACAATACCCTTGTAAGGCAGATGGCTGGATGCCTAAGCACACTGGGACGAGGCCAGGCACTCTaGCGCGGTGCACGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: PSNNTLVRQMAGCLSTLGRGQAL*RGARQP
Trigger: CGGCTGCCGTGCACCGCGCAAGAGTGCCTGGCCTCG...TCCCAGTGTGCTTAGGCATCCAGCCATCTGCCTTACAAGGGTATTGTTGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS TCA 90 bp GCAGGTAGTAGTAGTAGGCCACGGTGCTGCCGAAGCCATAGTAGCTaGTGGAAGCGTAGTCCAGGTAGAAGAAGGCGGCGCGCAGGCGCA +
Preference number: 5 (lower is better)
Translates to: AGSSSRPRCCRSHSS*WKRSPGRRRRRAGA
Trigger: TGCGCCTGCGCGCCGCCTTCTTCTACCTGGACTACGCTTCCATCAGCTACTATGGCTTCGGCAGCACCGTGGCCTACTACTACTACCTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS TCA 90 bp TGTCGAAGAGACCCGGCTGGATGCGCTCAGGGATCTTGCTCACGTTaGAGAAGGCGGCCACCACCAGCCAGAAGTAGCGGCGGTAGAAGT +
Preference number: 5 (lower is better)
Translates to: CRRDPAGCAQGSCSR*RRRPPPARSSGGRS
Trigger: ACTTCTACCGCCGCTACTTCTGGCTGGTGGTGGCCGCCTTCTTCAACGTGAGCAAGATCCCTGAGCGCATCCAGCCGGGTCTCTTCGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR CAA 90 bp GATTCGGCTTCACTGAGTAACAGCACTGGTAGTAAGCACACTATCAACTTCTGTAAGTTGAGCGTCTCATaGGTGGGCTTCAGCACCGAG +
Preference number: 5 (lower is better)
Translates to: DSASLSNSTGSKHTINFCKLSVS*VGFSTE
Trigger: CTCGGTGCTGAAGCCCACCAATGAGACGCTCAACTT...ACAGAAGTTGATAGTGTGCTTACTACCAGTGCTGTTACTCAGTGAAGCCGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR CAA 90 bp AGAATGGAATTGTACACTCAAGATATTTCCTTGGGAAATGTCATGTTTGGAACAGGGATCTTGCTCACGTaGAAGAAGGCGGCCACCACC +
Preference number: 5 (lower is better)
Translates to: RMELYTQDISLGNVMFGTGILLT*KKAATT
Trigger: GGTGGTGGCCGCCTTCTTCAACGTGAGCAAGATCCC...TGTTCCAAACATGACATTTCCCAAGGAAATATCTTGAGTGTACAATTCCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS-3UTR CAA 90 bp TATTTTGAACTGTTAAATGCAATCAAACCTAGTGGATGTGGTGAAATGGAGAAGATGCGCTCAGGGATCTaGCTCACGTTGAAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: YFELLNAIKPSGCGEMEKMRSGI*LTLKKA
Trigger: CGCCTTCTTCAACGTGAGCAAGATCCCTGAGCGCAT...CTTCTCCATTTCACCACATCCACTAGGTTTGATTGCATTTAACAGTTCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS TCA 72 bp AGGCCACGGGCAGCACGAGCGCGCGGTAGACCGCGATaGGGCGGGTGCAGTCCACGTGCCAGCCCAGGCGCT +
Preference number: 6 (lower is better)
Translates to: RPRAARARGRPR*GGCSPRASPGA
Trigger: AGCGCCTGGGCTGGCACGTGGACTGCACCCGCCTCATCGCGGTCTACCGCGCGCTCGTGCTGCCCGTGGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS GCA 72 bp GCCCACTGTGCCCGAGAAGGTGGGCGCGGCAGGGGGTaGCTGGAGGAACTGGCGCAGGCCCTCTTCCACGTA +
Preference number: 6 (lower is better)
Translates to: AHCAREGGRGRG*LEELAQALFHV
Trigger: TACGTGGAAGAGGGCCTGCGCCAGTTCCTCCAGGCACCCCCTGCCGCGCCCACCTTCTCGGGCACAGTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS TCA 72 bp GCGCGGTGCACGGCAGCCGCCGGTAGCCGGACAGGATaGAGCACTCCACGAAGTCATCGGGCACCTCGTCCC +
Preference number: 6 (lower is better)
Translates to: ARCTAAAGSRTG*STPRSHRAPRP
Trigger: GGGACGAGGTGCCCGATGACTTCGTGGAGTGCTTCATCCTGTCCGGCTACCGGCGGCTGCCGTGCACCGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS GCA 72 bp AGGCGGGTGCAGTCCACGTGCCAGCCCAGGCGCTGCTaGACATACGGCGTCATGACCCTGGCGTCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: RRVQSTCQPRRC*TYGVMTLASSR
Trigger: CCTGCTGGACGCCAGGGTCATGACGCCGTATGTGCAGCAGCGCCTGGGCTGGCACGTGGACTGCACCCGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS CCA 72 bp CCAGCAGCAGCATGTAGCCCACTGTGCCCGAGAAGGTaGGCGCGGCAGGGGGTGCCTGGAGGAACTGGCGCA +
Preference number: 6 (lower is better)
Translates to: PAAACSPLCPRR*ARQGVPGGTGA
Trigger: TGCGCCAGTTCCTCCAGGCACCCCCTGCCGCGCCCACCTTCTCGGGCACAGTGGGCTACATGCTGCTGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS GCA 72 bp ATGAGGCGGGTGCAGTCCACGTGCCAGCCCAGGCGCTaGTGCACATACGGCGTCATGACCCTGGCGTCCAGC +
Preference number: 6 (lower is better)
Translates to: MRRVQSTCQPRR*CTYGVMTLASS
Trigger: GCTGGACGCCAGGGTCATGACGCCGTATGTGCAGCAGCGCCTGGGCTGGCACGTGGACTGCACCCGCCTCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS GCA 72 bp AGCACCAGTCGGTGCGGCTCTTACAGCAAGCCACGGTaGAGGCCACAGCCAGCACGAAGGCCACGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: STSRCGSYSKPR*RPQPARRPRAA
Trigger: TGCTGCCCGTGGCCTTCGTGCTGGCTGTGGCCTGCACCGTGGCTTGCTGTAAGAGCCGCACCGACTGGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS GCA 72 bp AGGTGCGCAGGGCGAACGGGTAGGAGCACCAGTCGGTaGGGCTCTTACAGCAAGCCACGGTGCAGGCCACAG +
Preference number: 6 (lower is better)
Translates to: RCAGRTGRSTSR*GSYSKPRCRPQ
Trigger: CTGTGGCCTGCACCGTGGCTTGCTGTAAGAGCCGCACCGACTGGTGCTCCTACCCGTTCGCCCTGCGCACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS CAA 90 bp GTTGAGCGTCTCATTGGTGGGCTTCAGCACCGAGGCCAGGCACTCTaGCGCGGTGCACGGCAGCCGCCGGTAGCCGGACAGGATGAAGCA +
Preference number: 6 (lower is better)
Translates to: VERLIGGLQHRGQAL*RGARQPPVAGQDEA
Trigger: TGCTTCATCCTGTCCGGCTACCGGCGGCTGCCGTGCACCGCGCAAGAGTGCCTGGCCTCGGTGCTGAAGCCCACCAATGAGACGCTCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS TCA 72 bp GACCCGGCTGGATGCGCTCAGGGATCTTGCTCACGTTaGAGAAGGCGGCCACCACCAGCCAGAAGTAGCGGC +
Preference number: 6 (lower is better)
Translates to: DPAGCAQGSCSR*RRRPPPARSSG
Trigger: GCCGCTACTTCTGGCTGGTGGTGGCCGCCTTCTTCAACGTGAGCAAGATCCCTGAGCGCATCCAGCCGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS CCA 72 bp GCCAGAAGTAGCGGCGGTAGAAGTGCACGAAGAGTGTaGGGTTCTCGCCTCGCAGGTCGAAGAGCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: ARSSGGRSARRV*GSRLAGRRASS
Trigger: AGAGCTGGCTCTTCGACCTGCGAGGCGAGAACCCCACACTCTTCGTGCACTTCTACCGCCGCTACTTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS CAA 72 bp ATGTCGAAGAGACCCGGCTGGATGCGCTCAGGGATCTaGCTCACGTTGAAGAAGGCGGCCACCACCAGCCAG +
Preference number: 6 (lower is better)
Translates to: MSKRPGWMRSGI*LTLKKAATTSQ
Trigger: CTGGCTGGTGGTGGCCGCCTTCTTCAACGTGAGCAAGATCCCTGAGCGCATCCAGCCGGGTCTCTTCGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS CAA 72 bp AGCGGGATGAAGTGCGTCCAGAAGTTGAGCGTCTCATaGGTGGGCTTCAGCACCGAGGCCAGGCACTCTTGC +
Preference number: 6 (lower is better)
Translates to: SGMKCVQKLSVS*VGFSTEARHSC
Trigger: GCAAGAGTGCCTGGCCTCGGTGCTGAAGCCCACCAATGAGACGCTCAACTTCTGGACGCACTTCATCCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS CAA 72 bp AGGAACAGCAGCAGCGGGATGAAGTGCGTCCAGAAGTaGAGCGTCTCATTGGTGGGCTTCAGCACCGAGGCC +
Preference number: 6 (lower is better)
Translates to: RNSSSGMKCVQK*SVSLVGFSTEA
Trigger: GGCCTCGGTGCTGAAGCCCACCAATGAGACGCTCAACTTCTGGACGCACTTCATCCCGCTGCTGCTGTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7
CDS TCA 72 bp AGTAGTAGGCCACGGTGCTGCCGAAGCCATAGTAGCTaGTGGAAGCGTAGTCCAGGTAGAAGAAGGCGGCGC +
Preference number: 6 (lower is better)
Translates to: SSRPRCCRSHSS*WKRSPGRRRRR
Trigger: GCGCCGCCTTCTTCTACCTGGACTACGCTTCCATCAGCTACTATGGCTTCGGCAGCACCGTGGCCTACTACT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079597.7