Pregenerated sensors for PAQR7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037348Ensembl transcript IDs: ENSMUST00000081525.4, ENSMUST00000095074.4, ENSMUST00000125330.8, ENSMUST00000134506.8, ENSMUST00000136171.8
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTGTGATGCAGGGATGTGGGCAGGAGAGGGGATCTCTTATCTTTaGAGACTCTCTGGAACCCAGCGATCCAGGCTGTGGTGCAGGGGA | + |
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Preference number: 1 (lower is better) Translates to: GCDAGMWAGEGISYL*RLSGTQRSRLWCRG Trigger: TCCCCTGCACCACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATCCCCTCTCCTGCCCACATCCCTGCATCACAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR CCA 90 bp | AGGGATGTGGGCAGGAGAGGGGATCTCTTATCTTTGGAGACTCTCTaGAACCCAGCGATCCAGGCTGTGGTGCAGGGGACAGTGAAGTTA | + |
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Preference number: 1 (lower is better) Translates to: RDVGRRGDLLSLETL*NPAIQAVVQGTVKL Trigger: TAACTTCACTGTCCCCTGCACCACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATCCCCTCTCCTGCCCACATCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR CCA 90 bp | ATGGCCTGCCAGATAGAACCAGCTTTACCAGGCCTTGTTCCGATCTaGAGCCAAGTCCAGGCTTTTGTCCCTAGCACCTTCTCTCACCCT | + |
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Preference number: 1 (lower is better) Translates to: MACQIEPALPGLVPI*SQVQAFVPSTFSHP Trigger: AGGGTGAGAGAAGGTGCTAGGGACAAAAGCCTGGACTTGGCTCCAGATCGGAACAAGGCCTGGTAAAGCTGGTTCTATCTGGCAGGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR CCA 90 bp | AATGCTAGCTGTGAGGCTTTCTGGCTGGGCTGTGATGCAGGGATGTaGGCAGGAGAGGGGATCTCTTATCTTTGGAGACTCTCTGGAACC | + |
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Preference number: 1 (lower is better) Translates to: NASCEAFWLGCDAGM*AGEGISYLWRLSGT Trigger: GGTTCCAGAGAGTCTCCAAAGATAAGAGATCCCCTCTCCTGCCCACATCCCTGCATCACAGCCCAGCCAGAAAGCCTCACAGCTAGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR CCA 90 bp | GAACTCACTCCCCACTCCTGCCTTGTAAATTTCACCAAGGACACCTaGAAGAGAACTCTCTTCCCAACTCCTCCCAACTCTTCCCAACTC | + |
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Preference number: 1 (lower is better) Translates to: ELTPHSCLVNFTKDT*KRTLFPTPPNSSQL Trigger: GAGTTGGGAAGAGTTGGGAGGAGTTGGGAAGAGAGTTCTCTTCCAGGTGTCCTTGGTGAAATTTACAAGGCAGGAGTGGGGAGTGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
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| 3UTR CCA 90 bp | AGTGGCGGGACATGTCCTATCTGTTTCCTTATTCATCTGCAGTTCTaGGGACTGAATGAAGTGTCTCATGCAAGGCTCTTCATGAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: SGGTCPICFLIHLQF*GLNEVSHARLFMSS Trigger: ACTGCTCATGAAGAGCCTTGCATGAGACACTTCATTCAGTCCCCAGAACTGCAGATGAATAAGGAAACAGATAGGACATGTCCCGCCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
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| 3UTR GCA 90 bp | CTTCATTTGTTAGAGTGCTTGTCTAGCAGGCATGGGAGGCTTAAATaGAAACACTTGAGAGACAGAGGCAGGCAGATCTCTGTCAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: LHLLECLSSRHGRLK*KHLRDRGRQISVSS Trigger: TGAACTGACAGAGATCTGCCTGCCTCTGTCTCTCAAGTGTTTGCATTTAAGCCTCCCATGCCTGCTAGACAAGCACTCTAACAAATGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
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| 3UTR CAA 90 bp | CAGCTTTACCAGGCCTTGTTCCGATCTGGAGCCAAGTCCAGGCTTTaGTCCCTAGCACCTTCTCTCACCCTGCCAGCTCCCACCCACCCG | + |
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Preference number: 2 (lower is better) Translates to: QLYQALFRSGAKSRL*SLAPSLTLPAPTHP Trigger: CGGGTGGGTGGGAGCTGGCAGGGTGAGAGAAGGTGCTAGGGACAAAAGCCTGGACTTGGCTCCAGATCGGAACAAGGCCTGGTAAAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR GCA 90 bp | GAGAGGGGATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATCCAGGCTGTCACCTTCTCTCACCCTaGCAGCTCCCACCCACCCGC | + |
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Preference number: 2 (lower is better) Translates to: ERGSLIFGDSLEPSDPGCHLLSP*QLPPTR Trigger: GCGGGTGGGTGGGAGCTGGCAGGGTGAGAGAAGGTG...ACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATCCCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR GCA 90 bp | TCTAGGGCATATCAGGGACCAGCCTTGGCTCTCAGCCCCAGGGACCAAACTTGCGGAGTCCTTCATCTCTaGCCCTCCCAGGGAACTGAG | + |
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Preference number: 2 (lower is better) Translates to: SRAYQGPALALSPRDQTCGVLHL*PSQGTE Trigger: CTCAGTTCCCTGGGAGGGGCAGAGATGAAGGACTCC...GCAAGTTTGGTCCCTGGGGCTGAGAGCCAAGGCTGGTCCCTGATATGCCCTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR TCA 90 bp | AAAACACTACCCATCGTTGGGCCTGTTTCTTTTCCCTCCACCAGTGAGCTCTGGCCCCTCCCAGGGAACTaGGCAAGGCTCTACAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: KTLPIVGPVSFPSTSELWPLPGN*ARLYSS Trigger: GGAGCTGTAGAGCCTTGCTCAGTTCCCTGGGAGGGG...CCAGAGCTCACTGGTGGAGGGAAAAGAAACAGGCCCAACGATGGGTAGTGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR GCA 90 bp | TCAAACTCAGATCTCCTGGAAGGGCAGGACACACTCTTAACCAGTGAGCCCTCTTGGGTGGAACTCCCCTaGCCTTCTAGGTGCCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: SNSDLLEGQDTLLTSEPSWVELP*PSRCQG Trigger: CCCCTGGCACCTAGAAGGGCAGGGGAGTTCCACCCA...AGAGGGCTCACTGGTTAAGAGTGTGTCCTGCCCTTCCAGGAGATCTGAGTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
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| 3UTR-3UTR CCA 90 bp | CGGCAAGGGAGGGGCAGTCAGGAGTCCTTCATCTCTGCCCCTCCCAGGGAACTGCTAGCAGCATCACTTTaGCCATTGAGCTTGTATGCA | + |
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Preference number: 2 (lower is better) Translates to: RQGRGSQESFISAPPRELLAASL*PLSLYA Trigger: TGCATACAAGCTCAATGGCCAAAGTGATGCTGCTAG...CAGTTCCCTGGGAGGGGCAGAGATGAAGGACTCCTGACTGCCCCTCCCTTGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR TCA 90 bp | TTGTGGGGAGAAGCTGGAAACAGTGTGCAAGAGATACAGGCCAATGCTAGCTGTCCCCTCCCAGGGAACTaGGCAAGGCTCTACAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: LWGEAGNSVQEIQANASCPLPGN*ARLYSS Trigger: GGAGCTGTAGAGCCTTGCTCAGTTCCCTGGGAGGGG...ACAGCTAGCATTGGCCTGTATCTCTTGCACACTGTTTCCAGCTTCTCCCCACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR TCA 90 bp | GTGGGCAGGAGAGGGGATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATCCCCAAACCAGTGTGGTaGCCAAAGCTGAACTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: VGRRGDLLSLETLWNPAIPKPVW*PKLNSN Trigger: GTTGGAGTTCAGCTTTGGTCACCACACTGGTTTGGG...GATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATCCCCTCTCCTGCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR TCA 90 bp | TTTGCCTGCAACGCCCTTCTAAGCTCAGCCTGCAAACTCCTCACCCTTCCTAAGTCTCGCCCAGCAACCTaGAAACCCCAAACCAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: FACNALLSSACKLLTLPKSRPAT*KPQTSV Trigger: CACACTGGTTTGGGGTTTTCAGGTTGCTGGGCGAGA...CTTAGGAAGGGTGAGGAGTTTGCAGGCTGAGCTTAGAAGGGCGTTGCAGGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR TCA 90 bp | ATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATCCAGGCTGTGGTGCAGGCCCAAACCAGTGTGGTaGCCAAAGCTGAACTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: ISYLWRLSGTQRSRLWCRPKPVW*PKLNSN Trigger: GTTGGAGTTCAGCTTTGGTCACCACACTGGTTTGGG...CCTGCACCACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR TCA 90 bp | TCGTTGGGCCTGTTTCTTTTCCCTCCACCAGTGAGCTCTGGTAGGTGGTGGCTGCTCTCTGCTCAAATTTaGCACTGGCCTGAGTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SLGLFLFPPPVSSGRWWLLSAQI*HWPESS Trigger: AGAAGACTCAGGCCAGTGTCAAATTTGAGCAGAGAG...CAGCCACCACCTACCAGAGCTCACTGGTGGAGGGAAAAGAAACAGGCCCAACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGCAGGAGAGGGGATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATGGCCTTGTTCCGATCTaGAGCCAAGTCCAGGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: CGQERGSLIFGDSLEPSDGLVPI*SQVQAF Trigger: AAAAGCCTGGACTTGGCTCCAGATCGGAACAAGGCC...ATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATCCCCTCTCCTGCCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGGGATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATCCAGGCTGTGGCCTTGTTCCGATCTaGAGCCAAGTCCAGGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: ERGSLIFGDSLEPSDPGCGLVPI*SQVQAF Trigger: AAAAGCCTGGACTTGGCTCCAGATCGGAACAAGGCC...ACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATCCCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCTGCAACGCCCTTCTAAGCTCAGCCTGCAAACTCCTCACCCTTCCTAAGGTGAGCTCTGGTAGGTaGTGGCTGCTAAGACTTCCA | + |
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Preference number: 2 (lower is better) Translates to: FACNALLSSACKLLTLPKVSSGR*WLLRLP Trigger: TGGAAGTCTTAGCAGCCACCACCTACCAGAGCTCAC...CTTAGGAAGGGTGAGGAGTTTGCAGGCTGAGCTTAGAAGGGCGTTGCAGGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR CCA 90 bp | TCAAACTCAGATCTCCTGGAAGGGCAGGACACACTCTTAACCAGTGAGCCCTCTTGTGATGCAGGGATGTaGGCAGGAGAGGGGATCTCT | + |
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Preference number: 2 (lower is better) Translates to: SNSDLLEGQDTLLTSEPSCDAGM*AGEGIS Trigger: AGAGATCCCCTCTCCTGCCCACATCCCTGCATCACA...AGAGGGCTCACTGGTTAAGAGTGTGTCCTGCCCTTCCAGGAGATCTGAGTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGTTTCTTTTCCCTCCACCAGTGAGCTCTGGTAGGTGGTGGCTGCTAAGACTCTCTGCTCAAATTTaGCACTGGCCTGAGTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: GLFLFPPPVSSGRWWLLRLSAQI*HWPESS Trigger: AGAAGACTCAGGCCAGTGTCAAATTTGAGCAGAGAG...TCTTAGCAGCCACCACCTACCAGAGCTCACTGGTGGAGGGAAAAGAAACAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR GCA 90 bp | GATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATCCAGGCTGTGGTGCAGCTTCCACTCCCTCTCTaGTCAAATTTGACACTGGCC | + |
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Preference number: 2 (lower is better) Translates to: DLLSLETLWNPAIQAVVQLPLPL*SNLTLA Trigger: GGCCAGTGTCAAATTTGAGCAGAGAGGGAGTGGAAG...CTGCACCACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR GCA 90 bp | AAAACACTACCCATCGTTGGGCCTGTTTCTTTTCCCTCCACCAGTGAGCTCTGGCTTCCACTCCCTCTCTaGTCAAATTTGACACTGGCC | + |
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Preference number: 2 (lower is better) Translates to: KTLPIVGPVSFPSTSELWLPLPL*SNLTLA Trigger: GGCCAGTGTCAAATTTGAGCAGAGAGGGAGTGGAAG...CCAGAGCTCACTGGTGGAGGGAAAAGAAACAGGCCCAACGATGGGTAGTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCTGCAACGCCCTTCTAAGCTCAGCCTGCAAACTCCTCACCCTTCCTAAGGTTGTGGGGAGAAGCTaGAAACAGTGTGCAAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: FACNALLSSACKLLTLPKVVGRS*KQCARD Trigger: ATCTCTTGCACACTGTTTCCAGCTTCTCCCCACAAC...CTTAGGAAGGGTGAGGAGTTTGCAGGCTGAGCTTAGAAGGGCGTTGCAGGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCAGAAAGAAGCTCTTTGTTCTCTATAGCCAGCAAAAAGCCTTTTTGTTTCACCTTCTCTCACCCTaGCAGCTCCCACCCACCCGC | + |
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Preference number: 2 (lower is better) Translates to: TARKKLFVLYSQQKAFLFHLLSP*QLPPTR Trigger: GCGGGTGGGTGGGAGCTGGCAGGGTGAGAGAAGGTG...AAACAAAAAGGCTTTTTGCTGGCTATAGAGAACAAAGAGCTTCTTTCTGGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGGGATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATCCAGGCTGTCTAGCAGCATCACTTTaGCCATTGAGCTTGTATGCA | + |
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Preference number: 2 (lower is better) Translates to: ERGSLIFGDSLEPSDPGCLAASL*PLSLYA Trigger: TGCATACAAGCTCAATGGCCAAAGTGATGCTGCTAG...ACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATCCCCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCTGTTTCCCAGGCTGGCAATCTGGCCGATCTTTAATCCCTCAAAATGCCGTTGTGGGGAGAAGCTaGAAACAGTGTGCAAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: SLCFPGWQSGRSLIPQNAVVGRS*KQCARD Trigger: ATCTCTTGCACACTGTTTCCAGCTTCTCCCCACAAC...GGCATTTTGAGGGATTAAAGATCGGCCAGATTGCCAGCCTGGGAAACAGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCAGGTGGATTTCTGTGAGTTACAAAACAAACCTGGTGTACAGAGCAAGTCTTCTAAGCTCAGCCTaGAAACTCCTCACCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: RGRWISVSYKTNLVYRASLLSSA*KLLTLP Trigger: AGGAAGGGTGAGGAGTTTGCAGGCTGAGCTTAGAAG...ACTTGCTCTGTACACCAGGTTTGTTTTGTAACTCACAGAAATCCACCTGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCAGAAAGAAGCTCTTTGTTCTCTATAGCCAGCAAAAAGCCTTTTTGTTTAACAGGGCCCCTCCCTaGAACAGGAGTCAAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: TARKKLFVLYSQQKAFLFNRAPP*NRSQNK Trigger: TTTGTTTTGACTCCTGTTCCAGGGAGGGGCCCTGTT...AAACAAAAAGGCTTTTTGCTGGCTATAGAGAACAAAGAGCTTCTTTCTGGCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCAGAAAGAAGCTCTTTGTTCTCTATAGCCAGCAAAAAGCCTTTTTGTTTAACTCCCTGCATCTCTaGATCTCGAATCTCGGTACA | + |
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Preference number: 2 (lower is better) Translates to: TARKKLFVLYSQQKAFLFNSLHL*ISNLGT Trigger: TGTACCGAGATTCGAGATGCAGAGATGCAGGGAGTT...AAACAAAAAGGCTTTTTGCTGGCTATAGAGAACAAAGAGCTTCTTTCTGGCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
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| 3UTR TCA 72 bp | GTCAGGAGTCCTTCATCTCTGCCCCTCCCAGGGAACTaGGCAAGGCTCTACAGCTCCCAGCCAATCTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: VRSPSSLPLPGN*ARLYSSQPICR Trigger: CCTGCAGATTGGCTGGGAGCTGTAGAGCCTTGCTCAGTTCCCTGGGAGGGGCAGAGATGAAGGACTCCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR CAA 90 bp | GGCAGTCAGGAGTCCTTCATCTCTGCCCCTCCCAGGGAACTGAGCAAGGCTCTAGCCAAGTCCAGGCTTTaGTCCCTAGCACCTTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: GSQESFISAPPRELSKALAKSRL*SLAPSL Trigger: GAGAGAAGGTGCTAGGGACAAAAGCCTGGACTTGGC...TAGAGCCTTGCTCAGTTCCCTGGGAGGGGCAGAGATGAAGGACTCCTGACTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR CAA 90 bp | GGGCATATCAGGGACCAGCCTTGGCTCTCAGCCCCAGGGACCAAACTTGCCTTTCTGCAGGCCCAAGGATaGGCTAGCAGCATCACTTTG | + |
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Preference number: 3 (lower is better) Translates to: GHIRDQPWLSAPGTKLAFLQAQG*ASSITL Trigger: CAAAGTGATGCTGCTAGCCAATCCTTGGGCCTGCAG...AAAGGCAAGTTTGGTCCCTGGGGCTGAGAGCCAAGGCTGGTCCCTGATATGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR CCA 72 bp | GGCAGGAGAGGGGATCTCTTATCTTTGGAGACTCTCTaGAACCCAGCGATCCAGGCTGTGGTGCAGGGGACA | + |
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Preference number: 3 (lower is better) Translates to: GRRGDLLSLETL*NPAIQAVVQGT Trigger: TGTCCCCTGCACCACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATCCCCTCTCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR CCA 72 bp | GCAGGGATGTGGGCAGGAGAGGGGATCTCTTATCTTTaGAGACTCTCTGGAACCCAGCGATCCAGGCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: AGMWAGEGISYL*RLSGTQRSRLW Trigger: CCACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATCCCCTCTCCTGCCCACATCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR CAA 90 bp | GGAGTCATGGCCTGCCAGATAGAACCAGCTTTACCAGGCCTTGTTCCGATCTGGGCCAAGTCCAGGCTTTaGTCCCTAGCACCTTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: GVMACQIEPALPGLVPIWAKSRL*SLAPSL Trigger: GAGAGAAGGTGCTAGGGACAAAAGCCTGGACTTGGC...CCAGATCGGAACAAGGCCTGGTAAAGCTGGTTCTATCTGGCAGGCCATGACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR CAA 90 bp | ATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATCCAGGCTGTGGTGCAGGCAGCTTTACCAGGCCTaGTTCCGATCTGGAGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: ISYLWRLSGTQRSRLWCRQLYQA*FRSGAK Trigger: CTTGGCTCCAGATCGGAACAAGGCCTGGTAAAGCTG...CCTGCACCACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR CAA 90 bp | ACTCCCTCTCTGCTCAAATTTGACACTGGCCTGAGTCTTCTCGCCCAGCAACCTCAGCTTTACCAGGCCTaGTTCCGATCTGGAGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: TPSLLKFDTGLSLLAQQPQLYQA*FRSGAK Trigger: CTTGGCTCCAGATCGGAACAAGGCCTGGTAAAGCTG...AGGTTGCTGGGCGAGAAGACTCAGGCCAGTGTCAAATTTGAGCAGAGAGGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR CCA 72 bp | CTGTTTCTTTTCCCTCCACCAGTGAGCTCTGGTAGGTaGTGGCTGCTAAGACTTCCACTCCCTCTCTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: LFLFPPPVSSGR*WLLRLPLPLCS Trigger: TGAGCAGAGAGGGAGTGGAAGTCTTAGCAGCCACCACCTACCAGAGCTCACTGGTGGAGGGAAAAGAAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR TCA 72 bp | AGATCTCCTGGAAGGGCAGGACACACTCTTAACCAGTaGGCCCTCTCTCCAGCCCTGGGTGAATATTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: RSPGRAGHTLNQ*ALSPALGEYFL Trigger: CAAGAAATATTCACCCAGGGCTGGAGAGAGGGCTCACTGGTTAAGAGTGTGTCCTGCCCTTCCAGGAGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
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| 3UTR CCA 72 bp | CTCTACAGCTCCCAGCCAATCTGCAGGCCCAAGGATTaGCTAGCAGCATCACTTTGGCCATTGAGCTTGTAT | + |
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Preference number: 3 (lower is better) Translates to: LYSSQPICRPKD*LAASLWPLSLY Trigger: ATACAAGCTCAATGGCCAAAGTGATGCTGCTAGCCAATCCTTGGGCCTGCAGATTGGCTGGGAGCTGTAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR-3UTR CAA 90 bp | GGGCATATCAGGGACCAGCCTTGGCTCTCAGCCCCAGGGACCAAACTTGCCTTTCACTTTGAGTTTTCCTaGACAATTCCTAACGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: GHIRDQPWLSAPGTKLAFHFEFS*TIPNGS Trigger: AGAACCGTTAGGAATTGTCAAGGAAAACTCAAAGTG...AAAGGCAAGTTTGGTCCCTGGGGCTGAGAGCCAAGGCTGGTCCCTGATATGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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| 3UTR CCA 72 bp | TTTCTTTTCCCTCCACCAGTGAGCTCTGGTAGGTGGTaGCTGCTAAGACTTCCACTCCCTCTCTGCTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: FLFPPPVSSGRW*LLRLPLPLCSN Trigger: ATTTGAGCAGAGAGGGAGTGGAAGTCTTAGCAGCCACCACCTACCAGAGCTCACTGGTGGAGGGAAAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| 3UTR CCA 72 bp | CCCCACTCCTGCCTTGTAAATTTCACCAAGGACACCTaGAAGAGAACTCTCTTCCCAACTCCTCCCAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: PHSCLVNFTKDT*KRTLFPTPPNS Trigger: AGAGTTGGGAGGAGTTGGGAAGAGAGTTCTCTTCCAGGTGTCCTTGGTGAAATTTACAAGGCAGGAGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| 3UTR CCA 72 bp | ATTTTATTGAATCTAGGGCATATCAGGGACCAGCCTTaGCTCTCAGCCCCAGGGACCAAACTTGCCTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ILLNLGHIRDQP*LSAPGTKLAFS Trigger: GCTAAAGGCAAGTTTGGTCCCTGGGGCTGAGAGCCAAGGCTGGTCCCTGATATGCCCTAGATTCAATAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| 3UTR TCA 72 bp | TGTCTAGCAGGCATGGGAGGCTTAAATGCAAACACTTaGGAGACAGAGGCAGGCAGATCTCTGTCAGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: CLAGMGGLNANT*ETEAGRSLSVQ Trigger: TTGAACTGACAGAGATCTGCCTGCCTCTGTCTCTCAAGTGTTTGCATTTAAGCCTCCCATGCCTGCTAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| 3UTR CCA 72 bp | CCAGACAGAATCTCTCTGTTTCCCAGGCTGGCAATCTaGCCGATCTTTAATCCCTCAAAATGCCAGATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PDRISLFPRLAI*PIFNPSKCQIG Trigger: TCCTATCTGGCATTTTGAGGGATTAAAGATCGGCCAGATTGCCAGCCTGGGAAACAGAGAGATTCTGTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| 3UTR TCA 72 bp | ACACACACACACACTGCATTCCCAACAACAGTTCTGTaGGACCCCAACTTAAAGTGTTTCTCCCTGGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: THTHTAFPTTVL*DPNLKCFSLEG Trigger: ACCTTCCAGGGAGAAACACTTTAAGTTGGGGTCTCACAGAACTGTTGTTGGGAATGCAGTGTGTGTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| 3UTR GCA 72 bp | GGGGTTCGTCCTCAGCTAGCTGATAATAAAACCTCTTaGAATTTGCATCAGGTGGGTTATCTCTTGGGACGT | + |
|
Preference number: 3 (lower is better) Translates to: GVRPQLADNKTS*NLHQVGYLLGR Trigger: ACGTCCCAAGAGATAACCCACCTGATGCAAATTGCAAGAGGTTTTATTATCAGCTAGCTGAGGACGAACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| 3UTR CCA 72 bp | CTTTACTTCCAGACAGAATCTCTCTGTTTCCCAGGCTaGCAATCTGGCCGATCTTTAATCCCTCAAAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: LYFQTESLCFPG*QSGRSLIPQNA Trigger: GGCATTTTGAGGGATTAAAGATCGGCCAGATTGCCAGCCTGGGAAACAGAGAGATTCTGTCTGGAAGTAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| 3UTR CCA 72 bp | GACACACTCTTAACCAGTGAGCCCTCTCTCCAGCCCTaGGTGAATATTTCTTGTAACTTTTCGTATGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: DTLLTSEPSLQP*VNISCNFSYVW Trigger: CCAGACATACGAAAAGTTACAAGAAATATTCACCCAGGGCTGGAGAGAGGGCTCACTGGTTAAGAGTGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| 3UTR TCA 72 bp | CTGTTTCCTTATTCATCTGCAGTTCTGGGGACTGAATaGAGTGTCTCATGCAAGGCTCTTCATGAGCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LFPYSSAVLGTE*SVSCKALHEQF Trigger: GAACTGCTCATGAAGAGCCTTGCATGAGACACTTCATTCAGTCCCCAGAACTGCAGATGAATAAGGAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| 3UTR TCA 72 bp | CCTAACGGTTCTAAAGCCTGGAGCCCCAGGAAACAGTaGGCTAAGGAGTCATATCTCAAAATCATAAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: PNGSKAWSPRKQ*AKESYLKIINE Trigger: CTCATTTATGATTTTGAGATATGACTCCTTAGCTCACTGTTTCCTGGGGCTCCAGGCTTTAGAACCGTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| 3UTR GCA 72 bp | AAAAGCCTTTTTGTTTCTATACTTTACAACCAGAGATaGCTGCCTTCCTGTGCGGAGGACTCGGGAGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: KSLFVSILYNQR*LPSCAEDSGDK Trigger: TTTATCTCCCGAGTCCTCCGCACAGGAAGGCAGGCATCTCTGGTTGTAAAGTATAGAAACAAAAAGGCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAGTTACAGGAGATTGTGAGCCACCCAATATGTGTGCTGGAAATCAAACTCCCAGAAAGAAGCTCTTaGTTCTCTATAGCCAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LELQEIVSHPICVLEIKLPERSS*FSIASK Trigger: TTTGCTGGCTATAGAGAACAAAGAGCTTCTTTCTGG...GAGTTTGATTTCCAGCACACATATTGGGTGGCTCACAATCTCCTGTAACTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| 3UTR CCA 72 bp | GCTAAGGAGTCATATCTCAAAATCATAAATGAGTTGTaGGGAGAAGCTGGAAACAGTGTGCAAGAGATACAG | + |
|
Preference number: 3 (lower is better) Translates to: AKESYLKIINEL*GEAGNSVQEIQ Trigger: CTGTATCTCTTGCACACTGTTTCCAGCTTCTCCCCACAACTCATTTATGATTTTGAGATATGACTCCTTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| 3UTR CAA 72 bp | TGGGACGTTGGGGTGTTGGCCAGCTCATCCCGGGACTaGAGCAGAGGCCCAGCTCCGGGGGTCTTACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WDVGVLASSSRD*SRGPAPGVLQF Trigger: GAACTGTAAGACCCCCGGAGCTGGGCCTCTGCTCAAGTCCCGGGATGAGCTGGCCAACACCCCAACGTCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| CDS-3UTR TCA 90 bp | CGGCAAGGGAGGGGCAGTCAGGAGTCCTTCATCTCTGCCCCTCCCAGGGAACTGTTGGCCTGCAGGAGGTaGGCCACAGCACTGAACGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQGRGSQESFISAPPRELLACRR*ATALNE Trigger: CTCGTTCAGTGCTGTGGCTCACCTCCTGCAGGCCAA...CAGTTCCCTGGGAGGGGCAGAGATGAAGGACTCCTGACTGCCCCTCCCTTGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR TCA 90 bp | GGGCATATCAGGGACCAGCCTTGGCTCTCAGCCCCAGGGACCAAACTTGCCTTTTGCTGCTGGCCACGGTaGGCAGGAAGAGGCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GHIRDQPWLSAPGTKLAFCCWPR*AGRGQR Trigger: TCTCTGGCCTCTTCCTGCTCACCGTGGCCAGCAGCA...AAAGGCAAGTTTGGTCCCTGGGGCTGAGAGCCAAGGCTGGTCCCTGATATGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CCA 90 bp | GGCAGTCAGGAGTCCTTCATCTCTGCCCCTCCCAGGGAACTGAGCAAGGCTCTAGTCACCGCCTCTAGCTaGGCCAGAGTGCACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GSQESFISAPPRELSKALVTASS*ARVHST Trigger: GGTGCTGTGCACTCTGGCCCAGCTAGAGGCGGTGAC...TAGAGCCTTGCTCAGTTCCCTGGGAGGGGCAGAGATGAAGGACTCCTGACTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR TCA 90 bp | GTGGGCAGGAGAGGGGATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATCAAGAGGGGCAGCGCGTaGGGGTCTTCCCGGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGRRGDLLSLETLWNPAIKRGSA*GSSRKS Trigger: GGACTTCCGGGAAGACCCTCACGCGCTGCCCCTCTT...GATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATCCCCTCTCCTGCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| 3UTR CAA 72 bp | CAGGCCTTGTTCCGATCTGGAGCCAAGTCCAGGCTTTaGTCCCTAGCACCTTCTCTCACCCTGCCAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QALFRSGAKSRL*SLAPSLTLPAP Trigger: GGGAGCTGGCAGGGTGAGAGAAGGTGCTAGGGACAAAAGCCTGGACTTGGCTCCAGATCGGAACAAGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR TCA 90 bp | TTTGCCTGCAACGCCCTTCTAAGCTCAGCCTGCAAACTCCTCACCCTTCCTAAGAAGAGGGGCAGCGCGTaGGGGTCTTCCCGGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FACNALLSSACKLLTLPKKRGSA*GSSRKS Trigger: GGACTTCCGGGAAGACCCTCACGCGCTGCCCCTCTT...CTTAGGAAGGGTGAGGAGTTTGCAGGCTGAGCTTAGAAGGGCGTTGCAGGCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | GTGGGCAGGAGAGGGGATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATCGGCTTCTGGCCCACGTaGCACAGGCTGGACAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGRRGDLLSLETLWNPAIGFWPT*HRLDRR Trigger: CCTTCTGTCCAGCCTGTGGCACGTGGGCCAGAAGCC...GATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATCCCCTCTCCTGCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | CACTACCCATCGTTGGGCCTGTTTCTTTTCCCTCCACCAGTGAGCTCTGGTAGGGGCTTCTGGCCCACGTaGCACAGGCTGGACAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HYPSLGLFLFPPPVSSGRGFWPT*HRLDRR Trigger: CCTTCTGTCCAGCCTGTGGCACGTGGGCCAGAAGCC...CCTACCAGAGCTCACTGGTGGAGGGAAAAGAAACAGGCCCAACGATGGGTAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | GGGCATATCAGGGACCAGCCTTGGCTCTCAGCCCCAGGGACCAAACTTGCCTTTAACACAGGTTCTGGTTaGGGAGGCTTCTGGCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: GHIRDQPWLSAPGTKLAFNTGSG*GGFWPT Trigger: CGTGGGCCAGAAGCCTCCGCAACCAGAACCTGTGTT...AAAGGCAAGTTTGGTCCCTGGGGCTGAGAGCCAAGGCTGGTCCCTGATATGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | CCTCTACTGTCACTGCTCTGGGTGGAACTCCCCTGCCCTTCTAGGTGCCAGGGGGGCATAGTAGAAGTGTaGCAGGGCACTGCCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLSLLWVELPCPSRCQGGIVEV*QGTAKL Trigger: CAGTTTGGCAGTGCCCTGGCACACTTCTACTATGCC...CCCCTGGCACCTAGAAGGGCAGGGGAGTTCCACCCAGAGCAGTGACAGTAGAGG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | TGTGGGCAGGAGAGGGGATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATGCGCCTCCTGGAAAATaGGCCCCAGCAGACCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CGQERGSLIFGDSLEPSDAPPGK*APADPA Trigger: AGCCGGGTCTGCTGGGGCGCATTTTCCAGGAGGCGC...ATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATCCCCTCTCCTGCCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CCA 90 bp | GATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATCCAGGCTGTGGTGCAGAGGGCCGCCAGGAGGTaGGTCCACACGTTCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DLLSLETLWNPAIQAVVQRAARR*VHTFTA Trigger: GGCTGTGAACGTGTGGACCCACCTCCTGGCGGCCCT...CTGCACCACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CCA 90 bp | GATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATCCAGGCTGTGGTGCAGTTGCGCCGCACCAGCTaGCTGAGGAGGAGCGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DLLSLETLWNPAIQAVVQLRRTS*LRRSAV Trigger: CACTGCGCTCCTCCTCAGCCAGCTGGTGCGGCGCAA...CTGCACCACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR TCA 90 bp | TTTCTTTTCCCTCCACCAGTGAGCTCTGGTAGGTGGTGGCTGCTAAGACTTCCATGCTGCTGGCCACGGTaGGCAGGAAGAGGCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLFPPPVSSGRWWLLRLPCCWPR*AGRGQR Trigger: TCTCTGGCCTCTTCCTGCTCACCGTGGCCAGCAGCA...TGGAAGTCTTAGCAGCCACCACCTACCAGAGCTCACTGGTGGAGGGAAAAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CCA 90 bp | TTGTGGGGAGAAGCTGGAAACAGTGTGCAAGAGATACAGGCCAATGCTAGCTGTAGGGCCGCCAGGAGGTaGGTCCACACGTTCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LWGEAGNSVQEIQANASCRAARR*VHTFTA Trigger: GGCTGTGAACGTGTGGACCCACCTCCTGGCGGCCCT...ACAGCTAGCATTGGCCTGTATCTCTTGCACACTGTTTCCAGCTTCTCCCCACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGGATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATCCAGGCTGTGCCAGAACTCCGACTTaGCCTGCAGGAGGTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERGSLIFGDSLEPSDPGCARTPT*PAGGEP Trigger: TGGCTCACCTCCTGCAGGCCAAGTCGGAGTTCTGGC...ACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATCCCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | ACTCCCTCTCTGCTCAAATTTGACACTGGCCTGAGTCTTCTCGCCCAGCAACCTGCCTGCACCTTGTCATaGCAGGACGGCTCTATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPSLLKFDTGLSLLAQQPACTLS*QDGSMA Trigger: TGCCATAGAGCCGTCCTGGCATGACAAGGTGCAGGC...AGGTTGCTGGGCGAGAAGACTCAGGCCAGTGTCAAATTTGAGCAGAGAGGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | ATGAGTTGTGGGGAGAAGCTGGAAACAGTGTGCAAGAGATACAGGCCAATGCTAGCGCCTCCTGGAAAATaGGCCCCAGCAGACCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MSCGEKLETVCKRYRPMLAPPGK*APADPA Trigger: AGCCGGGTCTGCTGGGGCGCATTTTCCAGGAGGCGC...TAGCATTGGCCTGTATCTCTTGCACACTGTTTCCAGCTTCTCCCCACAACTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CCA 90 bp | GATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATCCAGGCTGTGGTGCAGAGGGCACTGCCAAACTaGTACACGGCCACACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: DLLSLETLWNPAIQAVVQRALPN*YTATPT Trigger: TGTGGGTGTGGCCGTGTACCAGTTTGGCAGTGCCCT...CTGCACCACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CCA 90 bp | AGTTGTGGGGAGAAGCTGGAAACAGTGTGCAAGAGATACAGGCCAATGCTAGCTGTCACCGCCTCTAGCTaGGCCAGAGTGCACAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SCGEKLETVCKRYRPMLAVTASS*ARVHST Trigger: GGTGCTGTGCACTCTGGCCCAGCTAGAGGCGGTGAC...AGCTAGCATTGGCCTGTATCTCTTGCACACTGTTTCCAGCTTCTCCCCACAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CCA 90 bp | AATGAGTTGTGGGGAGAAGCTGGAAACAGTGTGCAAGAGATACAGGCCAATGCTTTGCGCCGCACCAGCTaGCTGAGGAGGAGCGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NELWGEAGNSVQEIQANALRRTS*LRRSAV Trigger: CACTGCGCTCCTCCTCAGCCAGCTGGTGCGGCGCAA...AGCATTGGCCTGTATCTCTTGCACACTGTTTCCAGCTTCTCCCCACAACTCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | AAAACACTACCCATCGTTGGGCCTGTTTCTTTTCCCTCCACCAGTGAGCTCTGGAGTGTGCCAGGGCACTaGCAAACTGGTACACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTLPIVGPVSFPSTSELWSVPGH*QTGTRP Trigger: TGGCCGTGTACCAGTTTGGCAGTGCCCTGGCACACT...CCAGAGCTCACTGGTGGAGGGAAAAGAAACAGGCCCAACGATGGGTAGTGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | GGCCTGTTTCTTTTCCCTCCACCAGTGAGCTCTGGTAGGTGGTGGCTGCTAAGAGGCATAGTAGAAGTGTaGCAGGGCACTGCCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GLFLFPPPVSSGRWWLLRGIVEV*QGTAKL Trigger: CAGTTTGGCAGTGCCCTGGCACACTTCTACTATGCC...TCTTAGCAGCCACCACCTACCAGAGCTCACTGGTGGAGGGAAAAGAAACAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | TCGTTGGGCCTGTTTCTTTTCCCTCCACCAGTGAGCTCTGGTAGGTGGTGGCTGCTAGCTGGGCCAGAGTaGACAGCACCAAAAAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SLGLFLFPPPVSSGRWWLLAGPE*TAPKRH Trigger: ATGTCTTTTTGGTGCTGTGCACTCTGGCCCAGCTAG...CAGCCACCACCTACCAGAGCTCACTGGTGGAGGGAAAAGAAACAGGCCCAACGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTTCCCTCCACCAGTGAGCTCTGGTAGGTGGTGGCTGCTAAGACTTCCAAGGGCACTGCCAAACTaGTACACGGCCACACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FLFPPPVSSGRWWLLRLPRALPN*YTATPT Trigger: TGTGGGTGTGGCCGTGTACCAGTTTGGCAGTGCCCT...TGGAAGTCTTAGCAGCCACCACCTACCAGAGCTCACTGGTGGAGGGAAAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| 3UTR CAA 72 bp | GCTCTACAGCTCCCAGCCAATCTGCAGGCCCAAGGATaGGCTAGCAGCATCACTTTGGCCATTGAGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALQLPANLQAQG*ASSITLAIELV Trigger: TACAAGCTCAATGGCCAAAGTGATGCTGCTAGCCAATCCTTGGGCCTGCAGATTGGCTGGGAGCTGTAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR TCA 90 bp | ATGGCCTGCCAGATAGAACCAGCTTTACCAGGCCTTGTTCCGATCTGGAGCCAATGGACAGAAGGTGGTTaGACTTCTGGGCTACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MACQIEPALPGLVPIWSQWTEGG*TSGLLP Trigger: TGGCAGTAGCCCAGAAGTTCAACCACCTTCTGTCCA...TTGGCTCCAGATCGGAACAAGGCCTGGTAAAGCTGGTTCTATCTGGCAGGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | TTACCAGGCCTTGTTCCGATCTGGAGCCAAGTCCAGGCTTTTGTCCCTAGCACCGCCGCTGAAACAGTGTaGGGAAGTAGAAACACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPGLVPIWSQVQAFVPSTAAETV*GSRNTS Trigger: ACTGGTGTTTCTACTTCCGCACACTGTTTCAGCGGC...GGTGCTAGGGACAAAAGCCTGGACTTGGCTCCAGATCGGAACAAGGCCTGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CCA 90 bp | ACTCCCTCTCTGCTCAAATTTGACACTGGCCTGAGTCTTCTCGCCCAGCAACCTGCCAGGACGGCTCTATaGCATAGTAGAAGTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPSLLKFDTGLSLLAQQPARTAL*HSRSVP Trigger: TGGCACACTTCTACTATGCCATAGAGCCGTCCTGGC...AGGTTGCTGGGCGAGAAGACTCAGGCCAGTGTCAAATTTGAGCAGAGAGGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGGATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATCCAGGCTGTGCCAGGACGGCTCTATaGCATAGTAGAAGTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERGSLIFGDSLEPSDPGCARTAL*HSRSVP Trigger: TGGCACACTTCTACTATGCCATAGAGCCGTCCTGGC...ACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATCCCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| 3UTR CAA 72 bp | AATCTGCAGGCCCAAGGATTGGCTAGCAGCATCACTTaGGCCATTGAGCTTGTATGCAGGGAGTCATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLQAQGLASSIT*AIELVCRESWP Trigger: AGGCCATGACTCCCTGCATACAAGCTCAATGGCCAAAGTGATGCTGCTAGCCAATCCTTGGGCCTGCAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| 3UTR CAA 72 bp | AAAACCTCTTGCAATTTGCATCAGGTGGGTTATCTCTaGGGACGTTGGGGTGTTGGCCAGCTCATCCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTSCNLHQVGYL*GRWGVGQLIPG Trigger: TCCCGGGATGAGCTGGCCAACACCCCAACGTCCCAAGAGATAACCCACCTGATGCAAATTGCAAGAGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | ATGAGTTGTGGGGAGAAGCTGGAAACAGTGTGCAAGAGATACAGGCCAATGCTAAACACAGGTTCTGGTTaGGGAGGCTTCTGGCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: MSCGEKLETVCKRYRPMLNTGSG*GGFWPT Trigger: CGTGGGCCAGAAGCCTCCGCAACCAGAACCTGTGTT...TAGCATTGGCCTGTATCTCTTGCACACTGTTTCCAGCTTCTCCCCACAACTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CCA 90 bp | GATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATCCAGGCTGTGGTGCAGAGGCTGGACAGAAGGTaGTTGAACTTCTGGGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: DLLSLETLWNPAIQAVVQRLDRR*LNFWAT Trigger: AGTAGCCCAGAAGTTCAACCACCTTCTGTCCAGCCT...CTGCACCACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR TCA 90 bp | TTGTGGGGAGAAGCTGGAAACAGTGTGCAAGAGATACAGGCCAATGCTAGCTGTTGGACAGAAGGTGGTTaGACTTCTGGGCTACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LWGEAGNSVQEIQANASCWTEGG*TSGLLP Trigger: TGGCAGTAGCCCAGAAGTTCAACCACCTTCTGTCCA...ACAGCTAGCATTGGCCTGTATCTCTTGCACACTGTTTCCAGCTTCTCCCCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | AGTTGTGGGGAGAAGCTGGAAACAGTGTGCAAGAGATACAGGCCAATGCTAGCTCAAAGATGTGACAGCTaGCGGGGAACCAACTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCGEKLETVCKRYRPMLAQRCDS*RGTNSQ Trigger: CTGAGAGTTGGTTCCCCGGCAGCTGTCACATCTTTG...AGCTAGCATTGGCCTGTATCTCTTGCACACTGTTTCCAGCTTCTCCCCACAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CCA 90 bp | AAAACACTACCCATCGTTGGGCCTGTTTCTTTTCCCTCCACCAGTGAGCTCTGGAGGCTGGACAGAAGGTaGTTGAACTTCTGGGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: KTLPIVGPVSFPSTSELWRLDRR*LNFWAT Trigger: AGTAGCCCAGAAGTTCAACCACCTTCTGTCCAGCCT...CCAGAGCTCACTGGTGGAGGGAAAAGAAACAGGCCCAACGATGGGTAGTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTGTTTCTTTTCCCTCCACCAGTGAGCTCTGGTAGGTGGTGGCTGCTAAGAAGCACCAAAAAGACATaGAAAACTTGGTGTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLFLFPPPVSSGRWWLLRSTKKT*KTWCPC Trigger: GCAGGGACACCAAGTTTTCCATGTCTTTTTGGTGCT...TCTTAGCAGCCACCACCTACCAGAGCTCACTGGTGGAGGGAAAAGAAACAGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | AGAGGCAGGTGGATTTCTGTGAGTTACAAAACAAACCTGGTGTACAGAGCAAGTGCCTGCACCTTGTCATaGCAGGACGGCTCTATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGRWISVSYKTNLVYRASACTLS*QDGSMA Trigger: TGCCATAGAGCCGTCCTGGCATGACAAGGTGCAGGC...ACTTGCTCTGTACACCAGGTTTGTTTTGTAACTCACAGAAATCCACCTGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | ATGAGTTGTGGGGAGAAGCTGGAAACAGTGTGCAAGAGATACAGGCCAATGCTACAAAGATGTGACAGCTaGCGGGGAACCAACTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MSCGEKLETVCKRYRPMLQRCDS*RGTNSQ Trigger: CTGAGAGTTGGTTCCCCGGCAGCTGTCACATCTTTG...TAGCATTGGCCTGTATCTCTTGCACACTGTTTCCAGCTTCTCCCCACAACTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | TTGTGGGGAGAAGCTGGAAACAGTGTGCAAGAGATACAGGCCAATGCTAGCTGTCTAGCTGGGCCAGAGTaGACAGCACCAAAAAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LWGEAGNSVQEIQANASCLAGPE*TAPKRH Trigger: ATGTCTTTTTGGTGCTGTGCACTCTGGCCCAGCTAG...ACAGCTAGCATTGGCCTGTATCTCTTGCACACTGTTTCCAGCTTCTCCCCACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTGTTTCCCAGGCTGGCAATCTGGCCGATCTTTAATCCCTCAAAATGCCAGCACCAAAAAGACATaGAAAACTTGGTGTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLCFPGWQSGRSLIPQNASTKKT*KTWCPC Trigger: GCAGGGACACCAAGTTTTCCATGTCTTTTTGGTGCT...GGCATTTTGAGGGATTAAAGATCGGCCAGATTGCCAGCCTGGGAAACAGAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| CDS-3UTR GCA 90 bp | ACAGCCAGAAAGAAGCTCTTTGTTCTCTATAGCCAGCAAAAAGCCTTTTTGTTTAGTGTGCCAGGGCACTaGCAAACTGGTACACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TARKKLFVLYSQQKAFLFSVPGH*QTGTRP Trigger: TGGCCGTGTACCAGTTTGGCAGTGCCCTGGCACACT...AAACAAAAAGGCTTTTTGCTGGCTATAGAGAACAAAGAGCTTCTTTCTGGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| 3UTR CAA 72 bp | CGTCCTCAGCTAGCTGATAATAAAACCTCTTGCAATTaGCATCAGGTGGGTTATCTCTTGGGACGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPQLADNKTSCN*HQVGYLLGRWG Trigger: ACCCCAACGTCCCAAGAGATAACCCACCTGATGCAAATTGCAAGAGGTTTTATTATCAGCTAGCTGAGGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| CDS GCA 90 bp | GAAGAAGAGGGGCAGCGCGTGAGGGTCTTCCCGGAAGTCCACACTTaGCGCCAAGCCGATCAGCCGCAGCAGCAGAGCCAGGGCCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EEEGQRVRVFPEVHT*RQADQPQQQSQGRQ Trigger: CTGGCGGCCCTGGCTCTGCTGCTGCGGCTGATCGGCTTGGCGGCAAGTGTGGACTTCCGGGAAGACCCTCACGCGCTGCCCCTCTTCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 ENSMUST00000125330.8 ENSMUST00000134506.8 ENSMUST00000136171.8 |
||
| CDS GCA 90 bp | GGCCAGAGAAGTTGTGGGGCCAACGGGCGTGCAGAGGCTCGTATATaGCCCTCCGGGCCTGATAATCCAGTGTCACCGCCTCTAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GQRSCGANGRAEARI*PSGPDNPVSPPLAG Trigger: CCCAGCTAGAGGCGGTGACACTGGATTATCAGGCCCGGAGGGGCATATACGAGCCTCTGCACGCCCGTTGGCCCCACAACTTCTCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CAA 90 bp | TCTAGGGCATATCAGGGACCAGCCTTGGCTCTCAGCCCCAGGGACCAAACTTGCAAGAGGCCAGAGAAGTaGTGGGGCCAACGGGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRAYQGPALALSPRDQTCKRPEK*WGQRAC Trigger: GCACGCCCGTTGGCCCCACAACTTCTCTGGCCTCTT...GCAAGTTTGGTCCCTGGGGCTGAGAGCCAAGGCTGGTCCCTGATATGCCCTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS GCA 90 bp | GGTGGGTCCACACGTTCACAGCCTCGTTGTGCCGCTGAAACAGTGTaGGGAAGTAGAAACACCAGTTCTGATGCAGCGGCCGGTAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGSTRSQPRCAAETV*GSRNTSSDAAAGSQ Trigger: CTGGCTACCGGCCGCTGCATCAGAACTGGTGTTTCTACTTCCGCACACTGTTTCAGCGGCACAACGAGGCTGTGAACGTGTGGACCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 ENSMUST00000125330.8 ENSMUST00000134506.8 ENSMUST00000136171.8 |
||
| CDS CCA 90 bp | ATGCAGCGGCCGGTAGCCAGCATAGATGTACGGCTTCCAGAAAAGTaGCGGCACCTGGGCCCGGTCCACTGTAAACACAGGTTCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: MQRPVASIDVRLPEK*RHLGPVHCKHRFWL Trigger: CAACCAGAACCTGTGTTTACAGTGGACCGGGCCCAGGTGCCGCCACTTTTCTGGAAGCCGTACATCTATGCTGGCTACCGGCCGCTGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 ENSMUST00000125330.8 ENSMUST00000134506.8 ENSMUST00000136171.8 |
||
| CDS-3UTR CAA 90 bp | TTACCAGGCCTTGTTCCGATCTGGAGCCAAGTCCAGGCTTTTGTCCCTAGCACCAAGAGGCCAGAGAAGTaGTGGGGCCAACGGGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPGLVPIWSQVQAFVPSTKRPEK*WGQRAC Trigger: GCACGCCCGTTGGCCCCACAACTTCTCTGGCCTCTT...GGTGCTAGGGACAAAAGCCTGGACTTGGCTCCAGATCGGAACAAGGCCTGGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS GCA 90 bp | CTGCACCTTGTCATGCCAGGACGGCTCTATGGCATAGTAGAAGTGTaGCAGGGCACTGCCAAACTGGTACACGGCCACACCCACATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LHLVMPGRLYGIVEV*QGTAKLVHGHTHIV Trigger: GACTATGTGGGTGTGGCCGTGTACCAGTTTGGCAGTGCCCTGGCACACTTCTACTATGCCATAGAGCCGTCCTGGCATGACAAGGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 ENSMUST00000136171.8 |
||
| CDS GCA 90 bp | TCCGGGCCTGATAATCCAGTGTCACCGCCTCTAGCTGGGCCAGAGTaGACAGCACCAAAAAGACATGGAAAACTTGGTGTCCCTGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SGPDNPVSPPLAGPE*TAPKRHGKLGVPAQ Trigger: TTGGGCAGGGACACCAAGTTTTCCATGTCTTTTTGGTGCTGTGCACTCTGGCCCAGCTAGAGGCGGTGACACTGGATTATCAGGCCCGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CAA 90 bp | TCGTTGGGCCTGTTTCTTTTCCCTCCACCAGTGAGCTCTGGTAGGTGGTGGCTGAAAATAGCCTGCACCTaGTCATGCCAGGACGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLGLFLFPPPVSSGRWWLKIACT*SCQDGS Trigger: AGAGCCGTCCTGGCATGACAAGGTGCAGGCTATTTT...CAGCCACCACCTACCAGAGCTCACTGGTGGAGGGAAAAGAAACAGGCCCAACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS GCA 90 bp | CATGCCAGGACGGCTCTATGGCATAGTAGAAGTGTGCCAGGGCACTaGCAAACTGGTACACGGCCACACCCACATAGTCCAAGAAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: HARTALWHSRSVPGH*QTGTRPHPHSPRRR Trigger: TCTTCTTCTTGGACTATGTGGGTGTGGCCGTGTACCAGTTTGGCAGTGCCCTGGCACACTTCTACTATGCCATAGAGCCGTCCTGGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 ENSMUST00000136171.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCCTGCCAGATAGAACCAGCTTTACCAGGCCTTGTTCCGATCTGGAGCCAAAAAATAGCCTGCACCTaGTCATGCCAGGACGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MACQIEPALPGLVPIWSQKIACT*SCQDGS Trigger: AGAGCCGTCCTGGCATGACAAGGTGCAGGCTATTTT...TTGGCTCCAGATCGGAACAAGGCCTGGTAAAGCTGGTTCTATCTGGCAGGCCAT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CAA 90 bp | CCGGGACTTGAGCAGAGGCCCAGCTCCGGGGGTCTTACAGTTCTACCCTTTGGTAAGGAAGAAAACCACTaGGCATTTGTGATAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGLEQRPSSGGLTVLPFGKEENH*AFVIEK Trigger: CTTCTCTATCACAAATGCCAAGTGGTTTTCTTCCTT...ACCAAAGGGTAGAACTGTAAGACCCCCGGAGCTGGGCCTCTGCTCAAGTCCCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095074.4 |
||
| CDS-3UTR CAA 90 bp | TGTGGGCAGGAGAGGGGATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATAAAGACATGGAAAACTaGGTGTCCCTGCCCAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CGQERGSLIFGDSLEPSDKDMEN*VSLPKD Trigger: ATCTTTGGGCAGGGACACCAAGTTTTCCATGTCTTT...ATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATCCCCTCTCCTGCCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS-3UTR CAA 90 bp | GATCTCTTATCTTTGGAGACTCTCTGGAACCCAGCGATCCAGGCTGTGGTGCAGAAGGAAGAAAACCACTaGGCATTTGTGATAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DLLSLETLWNPAIQAVVQKEENH*AFVIEK Trigger: CTTCTCTATCACAAATGCCAAGTGGTTTTCTTCCTT...CTGCACCACAGCCTGGATCGCTGGGTTCCAGAGAGTCTCCAAAGATAAGAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS GCA 72 bp | GGGCAGCGCGTGAGGGTCTTCCCGGAAGTCCACACTTaGCGCCAAGCCGATCAGCCGCAGCAGCAGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GQRVRVFPEVHT*RQADQPQQQSQ Trigger: CTGGCTCTGCTGCTGCGGCTGATCGGCTTGGCGGCAAGTGTGGACTTCCGGGAAGACCCTCACGCGCTGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 ENSMUST00000125330.8 ENSMUST00000134506.8 ENSMUST00000136171.8 |
||
| CDS CAA 72 bp | GGGGCAGCGCGTGAGGGTCTTCCCGGAAGTCCACACTaGCCGCCAAGCCGATCAGCCGCAGCAGCAGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GAAREGLPGSPH*PPSRSAAAAEP Trigger: TGGCTCTGCTGCTGCGGCTGATCGGCTTGGCGGCAAGTGTGGACTTCCGGGAAGACCCTCACGCGCTGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 ENSMUST00000125330.8 ENSMUST00000134506.8 ENSMUST00000136171.8 |
||
| CDS CAA 90 bp | GTGAGGCTGCTGCTGGCCACGGTGAGCAGGAAGAGGCCAGAGAAGTaGTGGGGCCAACGGGCGTGCAGAGGCTCGTATATGCCCCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: VRLLLATVSRKRPEK*WGQRACRGSYMPLR Trigger: CCGGAGGGGCATATACGAGCCTCTGCACGCCCGTTGGCCCCACAACTTCTCTGGCCTCTTCCTGCTCACCGTGGCCAGCAGCAGCCTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS GCA 72 bp | ACCTGGGCCCGGTCCACTGTAAACACAGGTTCTGGTTaGGGAGGCTTCTGGCCCACGTGCCACAGGCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: TWARSTVNTGSG*GGFWPTCHRLD Trigger: GTCCAGCCTGTGGCACGTGGGCCAGAAGCCTCCGCAACCAGAACCTGTGTTTACAGTGGACCGGGCCCAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 ENSMUST00000125330.8 ENSMUST00000134506.8 ENSMUST00000136171.8 |
||
| CDS CAA 90 bp | AAGTGGCGGCACCTGGGCCCGGTCCACTGTAAACACAGGTTCTGGTaGCGGAGGCTTCTGGCCCACGTGCCACAGGCTGGACAGAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KWRHLGPVHCKHRFW*RRLLAHVPQAGQKV Trigger: CACCTTCTGTCCAGCCTGTGGCACGTGGGCCAGAAGCCTCCGCAACCAGAACCTGTGTTTACAGTGGACCGGGCCCAGGTGCCGCCACTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 ENSMUST00000125330.8 ENSMUST00000134506.8 ENSMUST00000136171.8 |
||
| CDS GCA 72 bp | AGTTGTGGGGCCAACGGGCGTGCAGAGGCTCGTATATaGCCCTCCGGGCCTGATAATCCAGTGTCACCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SCGANGRAEARI*PSGPDNPVSPP Trigger: AGGCGGTGACACTGGATTATCAGGCCCGGAGGGGCATATACGAGCCTCTGCACGCCCGTTGGCCCCACAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS TCA 72 bp | AAGGAGGCCAAGACGATGAAGAAGAGGGGCAGCGCGTaGGGGTCTTCCCGGAAGTCCACACTTGCCGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: KEAKTMKKRGSA*GSSRKSTLAAK Trigger: CTTGGCGGCAAGTGTGGACTTCCGGGAAGACCCTCACGCGCTGCCCCTCTTCTTCATCGTCTTGGCCTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 ENSMUST00000125330.8 ENSMUST00000134506.8 ENSMUST00000136171.8 |
||
| CDS CCA 72 bp | CCGGTAGCCAGCATAGATGTACGGCTTCCAGAAAAGTaGCGGCACCTGGGCCCGGTCCACTGTAAACACAGG | + |
|
Preference number: 6 (lower is better) Translates to: PVASIDVRLPEK*RHLGPVHCKHR Trigger: CCTGTGTTTACAGTGGACCGGGCCCAGGTGCCGCCACTTTTCTGGAAGCCGTACATCTATGCTGGCTACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 ENSMUST00000125330.8 ENSMUST00000134506.8 ENSMUST00000136171.8 |
||
| CDS GCA 72 bp | AACACAGGTTCTGGTTGCGGAGGCTTCTGGCCCACGTaGCACAGGCTGGACAGAAGGTGGTTGAACTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: NTGSGCGGFWPT*HRLDRRWLNFW Trigger: CCAGAAGTTCAACCACCTTCTGTCCAGCCTGTGGCACGTGGGCCAGAAGCCTCCGCAACCAGAACCTGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 ENSMUST00000125330.8 ENSMUST00000134506.8 ENSMUST00000136171.8 |
||
| CDS GCA 72 bp | GTCATGCCAGGACGGCTCTATGGCATAGTAGAAGTGTaGCAGGGCACTGCCAAACTGGTACACGGCCACACC | + |
|
Preference number: 6 (lower is better) Translates to: VMPGRLYGIVEV*QGTAKLVHGHT Trigger: GGTGTGGCCGTGTACCAGTTTGGCAGTGCCCTGGCACACTTCTACTATGCCATAGAGCCGTCCTGGCATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 ENSMUST00000136171.8 |
||
| CDS CCA 72 bp | TCCACTGTAAACACAGGTTCTGGTTGCGGAGGCTTCTaGCCCACGTGCCACAGGCTGGACAGAAGGTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: STVNTGSGCGGF*PTCHRLDRRWL Trigger: CAACCACCTTCTGTCCAGCCTGTGGCACGTGGGCCAGAAGCCTCCGCAACCAGAACCTGTGTTTACAGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 ENSMUST00000125330.8 ENSMUST00000134506.8 ENSMUST00000136171.8 |
||
| CDS GCA 72 bp | ACACGTTCACAGCCTCGTTGTGCCGCTGAAACAGTGTaGGGAAGTAGAAACACCAGTTCTGATGCAGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TRSQPRCAAETV*GSRNTSSDAAA Trigger: GGCCGCTGCATCAGAACTGGTGTTTCTACTTCCGCACACTGTTTCAGCGGCACAACGAGGCTGTGAACGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 ENSMUST00000125330.8 ENSMUST00000134506.8 ENSMUST00000136171.8 |
||
| CDS GCA 72 bp | ACGGCTCTATGGCATAGTAGAAGTGTGCCAGGGCACTaGCAAACTGGTACACGGCCACACCCACATAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TALWHSRSVPGH*QTGTRPHPHSP Trigger: TGGACTATGTGGGTGTGGCCGTGTACCAGTTTGGCAGTGCCCTGGCACACTTCTACTATGCCATAGAGCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 ENSMUST00000136171.8 |
||
| CDS TCA 72 bp | AAGACATGGAAAACTTGGTGTCCCTGCCCAAAGATGTaGCAGCTGCCGGGGAACCAACTCTCAGGCATAACC | + |
|
Preference number: 6 (lower is better) Translates to: KTWKTWCPCPKM*QLPGNQLSGIT Trigger: GGTTATGCCTGAGAGTTGGTTCCCCGGCAGCTGTCACATCTTTGGGCAGGGACACCAAGTTTTCCATGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
||
| CDS GCA 72 bp | GATAATCCAGTGTCACCGCCTCTAGCTGGGCCAGAGTaGACAGCACCAAAAAGACATGGAAAACTTGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: DNPVSPPLAGPE*TAPKRHGKLGV Trigger: GACACCAAGTTTTCCATGTCTTTTTGGTGCTGTGCACTCTGGCCCAGCTAGAGGCGGTGACACTGGATTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081525.4 ENSMUST00000095074.4 |
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