Pregenerated sensors for PAQR6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041423Ensembl transcript IDs: ENSMUST00000147948.8, ENSMUST00000147991.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGACACATCCAAACACACAAATTGGCAAAGGCTTGGTCACAGTGGTaGGCAAGACAGGCAGCAGTGAGTAGATACAGAGCTGCTGACAAG | + |
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Preference number: 1 (lower is better) Translates to: GHIQTHKLAKAWSQW*ARQAAVSRYRAADK Trigger: CTTGTCAGCAGCTCTGTATCTACTCACTGCTGCCTGTCTTGCTCACCACTGTGACCAAGCCTTTGCCAATTTGTGTGTTTGGATGTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| 3UTR-3UTR CCA 90 bp | GACAAGAGGCACAGTCTGGCCCTGGGGCAGGGTGGGTATGTGGCCCCGATGGAAAGGTCCTGGGGCAGCTaGGCAGAAGCCCCAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: DKRHSLALGQGGYVAPMERSWGS*AEAPGE Trigger: CTCTCCTGGGGCTTCTGCCCAGCTGCCCCAGGACCT...TTCCATCGGGGCCACATACCCACCCTGCCCCAGGGCCAGACTGTGCCTCTTGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCCCATAGCCTACCTCCCCACAGCAATCCCCACCACAACCATTATCTCACCGGCTCTTCCGAGGCAGTaGGACCTGGCCTCTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SPIAYLPTAIPTTTIISPALPRQ*DLASPS Trigger: GGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGC...CGGTGAGATAATGGTTGTGGTGGGGATTGCTGTGGGGAGGTAGGCTATGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| 3UTR CCA 72 bp | GATACAGAGCTGCTGACAAGAGGCACAGTCTGGCCCTaGGGCAGGGTGGGTATGTGGCCCCGATGGAACAAG | + |
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Preference number: 3 (lower is better) Translates to: DTELLTRGTVWP*GRVGMWPRWNK Trigger: CTTGTTCCATCGGGGCCACATACCCACCCTGCCCCAGGGCCAGACTGTGCCTCTTGTCAGCAGCTCTGTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR GCA 90 bp | GGCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCCCCAGGGTGGGCTCCTaGACGGCCAGCCAGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GPCQAGLFRGSETWPLPPPRVGS*TASQAL Trigger: CAGAGCCTGGCTGGCCGTGCAGGAGCCCACCCTGGG...GGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGCC 70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR GCA 90 bp | GGCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCTCCAGTGGGCTACCCTaGAGCAGGGGGCAGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GPCQAGLFRGSETWPLPPSSGLP*SRGQGP Trigger: TGGACCCTGCCCCCTGCTGCAGGGTAGCCCACTGGA...GGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR GCA 90 bp | GGCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCCGGCCAGCCAGGCTCTaGGGGATCCCATATCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GPCQAGLFRGSETWPLPPRPARL*GIPYQP Trigger: TGGCTGATATGGGATCCCGCAGAGCCTGGCTGGCCG...GGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | GGCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCGCTTCCAGCTGGAAGTaGGTGCCCAGCACGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: GPCQAGLFRGSETWPLPPASSWK*VPSTAQ Trigger: CTGTGCCGTGCTGGGCACCCACTTCCAGCTGGAAGC...GGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | GGCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCAGCACCGCTTCCAGCTaGAAGTGGGTGCCCAGCACG | + |
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Preference number: 4 (lower is better) Translates to: GPCQAGLFRGSETWPLPPSTASS*KWVPST Trigger: CGTGCTGGGCACCCACTTCCAGCTGGAAGCGGTGCT...GGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | GGCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCCTGCCAGGCTCAAGGTaGCTACAGTGGCCCCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: GPCQAGLFRGSETWPLPPLPGSR*LQWPPD Trigger: GTCTGGGGGCCACTGTAGCCACCTTGAGCCTGGCAG...GGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | GCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCTAGCACCGCTTCCAGCTaGAAGTGGGTGCCCAGCACG | + |
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Preference number: 4 (lower is better) Translates to: AHVRQGSSEAVRPGLSLPSTASS*KWVPST Trigger: CGTGCTGGGCACCCACTTCCAGCTGGAAGCGGTGCT...AGGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | GCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCTTCAAGGTGGCTACAGTaGCCCCCAGACCCAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: AHVRQGSSEAVRPGLSLPSRWLQ*PPDPGW Trigger: CCACCCTGGGTCTGGGGGCCACTGTAGCCACCTTGA...AGGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | GCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCTGAGTCCCTCTTCCAGTaGGCTACCCTGCAGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: AHVRQGSSEAVRPGLSLPESLFQ*ATLQQG Trigger: CCCCTGCTGCAGGGTAGCCCACTGGAAGAGGGACTC...AGGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR TCA 90 bp | GGCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCCAGGTGGGCAGGAAGTaGGTCCAGATGTTGACCGTC | + |
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Preference number: 4 (lower is better) Translates to: GPCQAGLFRGSETWPLPPQVGRK*VQMLTV Trigger: GACGGTCAACATCTGGACTCACTTCCTGCCCACCTG...GGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | CCACCTTCTCAGGCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCTCAAGGTGGCTACAGTaGCCCCCAGACCCAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PPSQAHVRQGSSEAVRPGSRWLQ*PPDPGW Trigger: CCACCCTGGGTCTGGGGGCCACTGTAGCCACCTTGA...GCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGCCTGAGAAGGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | TCTCAGGCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCGAGTCCCTCTTCCAGTaGGCTACCCTGCAGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: SQAHVRQGSSEAVRPGLSESLFQ*ATLQQG Trigger: CCCCTGCTGCAGGGTAGCCCACTGGAAGAGGGACTC...GGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGCCTGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR GCA 90 bp | GCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCTCCAGCTGGAAGTGGGTaGCCAGCACGGCACAGATAT | + |
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Preference number: 4 (lower is better) Translates to: AHVRQGSSEAVRPGLSLPPAGSG*PARHRY Trigger: ATATCTGTGCCGTGCTGGGCACCCACTTCCAGCTGG...AGGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR GCA 90 bp | GACAAGAGGCACAGTCTGGCCCTGGGGCAGGGTGGGTATGTGGCCCCGATGGAACCAGCTGGAAGTGGGTaGCCAGCACGGCACAGATAT | + |
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Preference number: 4 (lower is better) Translates to: DKRHSLALGQGGYVAPMEPAGSG*PARHRY Trigger: ATATCTGTGCCGTGCTGGGCACCCACTTCCAGCTGG...TTCCATCGGGGCCACATACCCACCCTGCCCCAGGGCCAGACTGTGCCTCTTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR GCA 90 bp | AGTCCCATAGCCTACCTCCCCACAGCAATCCCCACCACAACCATTATCTCACCGCCCAGGGTGGGCTCCTaGACGGCCAGCCAGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SPIAYLPTAIPTTTIISPPRVGS*TASQAL Trigger: CAGAGCCTGGCTGGCCGTGCAGGAGCCCACCCTGGG...CGGTGAGATAATGGTTGTGGTGGGGATTGCTGTGGGGAGGTAGGCTATGGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | GCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCTCTAAGGCAGAGCTTGTaGGGCATCGGTAGCCAGACA | + |
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Preference number: 4 (lower is better) Translates to: AHVRQGSSEAVRPGLSLPLRQSL*GIGSQT Trigger: TGTCTGGCTACCGATGCCCCACAAGCTCTGCCTTAG...AGGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | GCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCTAGCACGGCACAGATATaGAACAGCTGGTGGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: AHVRQGSSEAVRPGLSLPSTAQI*NSWWLW Trigger: CCACAGCCACCAGCTGTTCCATATCTGTGCCGTGCT...AGGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR TCA 90 bp | GCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCTTGGACTCGAAGGAGTTaGGGCATCTTGAGACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: AHVRQGSSEAVRPGLSLPWTRRS*GILRLS Trigger: GCTCAGTCTCAAGATGCCTCAACTCCTTCGAGTCCA...AGGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR TCA 90 bp | TCCCCACTCTGCTCCCCGCCTGGTACCTGTGTTAATTTAGACCTTCACCACCTGCCAGGCTGTAGAGGCTaGGCGCCCCGTAGTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SPLCSPPGTCVNLDLHHLPGCRG*APRSPG Trigger: TCCTGGACTACGGGGCGCTCAGCCTCTACAGCCTGG...CAGGTGGTGAAGGTCTAAATTAACACAGGTACCAGGCGGGGAGCAGAGTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR GCA 90 bp | AGTCCCATAGCCTACCTCCCCACAGCAATCCCCACCACAACCATTATCTCACCGTGGTGTAGGCGGCTGTaGAGCCAGGAGGCCGGCATG | + |
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Preference number: 4 (lower is better) Translates to: SPIAYLPTAIPTTTIISPWCRRL*SQEAGM Trigger: CATGCCGGCCTCCTGGCTGCACAGCCGCCTACACCA...CGGTGAGATAATGGTTGTGGTGGGGATTGCTGTGGGGAGGTAGGCTATGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR TCA 90 bp | GCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCTATCGGTAGCCAGACATaGTGCCTTCTTCCCAAAACA | + |
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Preference number: 4 (lower is better) Translates to: AHVRQGSSEAVRPGLSLPIGSQT*CLLPKT Trigger: TGTTTTGGGAAGAAGGCATCATGTCTGGCTACCGAT...AGGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR GCA 90 bp | GTCCCTAGAGAGCCTCTTCTCTTCAGCTACCCCTTTCAGGGTCAGAATAGTCGCTCCAGTGGGCTACCCTaGAGCAGGGGGCAGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VPREPLLFSYPFQGQNSRSSGLP*SRGQGP Trigger: TGGACCCTGCCCCCTGCTGCAGGGTAGCCCACTGGA...GCGACTATTCTGACCCTGAAAGGGGTAGCTGAAGAGAAGAGGCTCTCTAGGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | GTCAGAATAGTCGCCACCTTCTCAGGCCCATGTCAGGCAGGGCTCTTCCGAGGCCTAAGGCAGAGCTTGTaGGGCATCGGTAGCCAGACA | + |
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Preference number: 4 (lower is better) Translates to: VRIVATFSGPCQAGLFRGLRQSL*GIGSQT Trigger: TGTCTGGCTACCGATGCCCCACAAGCTCTGCCTTAG...GCCTCGGAAGAGCCCTGCCTGACATGGGCCTGAGAAGGTGGCGACTATTCTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | GGCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCGTCTCATTAGTCATCTaGAAGGAGCTGAGAACACAG | + |
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Preference number: 4 (lower is better) Translates to: GPCQAGLFRGSETWPLPPVSLVI*KELRTQ Trigger: CTGTGTTCTCAGCTCCTTCCAGATGACTAATGAGAC...GGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | AATTTAGACCTTCACCACCTGCCTCTTGGGTCTTCCGTCCTTCCACCTGTCCCTGCCAGGAGGCCGGCATaGAGTAGGCGGCATAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: NLDLHHLPLGSSVLPPVPARRPA*SRRHRG Trigger: TCCCCTATGCCGCCTACTCCATGCCGGCCTCCTGGC...AGGGACAGGTGGAAGGACGGAAGACCCAAGAGGCAGGTGGTGAAGGTCTAAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | GGCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCCAGCCTGTAGAACAGTaGGAGGTTGTCAAACAAGAA | + |
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Preference number: 4 (lower is better) Translates to: GPCQAGLFRGSETWPLPPQPVEQ*EVVKQE Trigger: TTCTTGTTTGACAACCTCCCACTGTTCTACAGGCTG...GGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | GCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCTTACTGTTGTTTAGCTTaGAGTCCCTCTTCCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: AHVRQGSSEAVRPGLSLPYCCLA*SPSSSG Trigger: CCCACTGGAAGAGGGACTCCAAGCTAAACAACAGTA...AGGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR TCA 90 bp | ATAGTCGCCACCTTCTCAGGCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGTGGACTCGAAGGAGTTaGGGCATCTTGAGACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: IVATFSGPCQAGLFRGSEWTRRS*GILRLS Trigger: GCTCAGTCTCAAGATGCCTCAACTCCTTCGAGTCCA...CTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGCCTGAGAAGGTGGCGACTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | AATTTAGACCTTCACCACCTGCCTCTTGGGTCTTCCGTCCTTCCACCTGTCCCTCTGCCAGGCTCAAGGTaGCTACAGTGGCCCCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: NLDLHHLPLGSSVLPPVPLPGSR*LQWPPD Trigger: GTCTGGGGGCCACTGTAGCCACCTTGAGCCTGGCAG...AGGGACAGGTGGAAGGACGGAAGACCCAAGAGGCAGGTGGTGAAGGTCTAAATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | CCACCTTCTCAGGCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCTACTGTTGTTTAGCTTaGAGTCCCTCTTCCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PPSQAHVRQGSSEAVRPGYCCLA*SPSSSG Trigger: CCCACTGGAAGAGGGACTCCAAGCTAAACAACAGTA...GCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGCCTGAGAAGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | TCTCAGGCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCGTCTCATTAGTCATCTaGAAGGAGCTGAGAACACAG | + |
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Preference number: 4 (lower is better) Translates to: SQAHVRQGSSEAVRPGLSVSLVI*KELRTQ Trigger: CTGTGTTCTCAGCTCCTTCCAGATGACTAATGAGAC...GGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGCCTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR TCA 90 bp | TCACCGGGGACACATCCAAACACACAAATTGGCAAAGGCTTGGTCACAGTGGTGTGCACAGGAAAGAGTTaGGCGCAGCAGCGGGCACGA | + |
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Preference number: 4 (lower is better) Translates to: SPGTHPNTQIGKGLVTVVCTGKS*AQQRAR Trigger: TCGTGCCCGCTGCTGCGCTCAACTCTTTCCTGTGCA...CACCACTGTGACCAAGCCTTTGCCAATTTGTGTGTTTGGATGTGTCCCCGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR GCA 90 bp | TGTGTTAATTTAGACCTTCACCACCTGCCTCTTGGGTCTTCCGTCCTTCCACCTCGGCCAGCCAGGCTCTaGGGGATCCCATATCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: CVNLDLHHLPLGSSVLPPRPARL*GIPYQP Trigger: TGGCTGATATGGGATCCCGCAGAGCCTGGCTGGCCG...AGGTGGAAGGACGGAAGACCCAAGAGGCAGGTGGTGAAGGTCTAAATTAACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR CCA 90 bp | GTCAGAATAGTCGCCACCTTCTCAGGCCCATGTCAGGCAGGGCTCTTCCGAGGCCAGCCTGTAGAACAGTaGGAGGTTGTCAAACAAGAA | + |
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Preference number: 4 (lower is better) Translates to: VRIVATFSGPCQAGLFRGQPVEQ*EVVKQE Trigger: TTCTTGTTTGACAACCTCCCACTGTTCTACAGGCTG...GCCTCGGAAGAGCCCTGCCTGACATGGGCCTGAGAAGGTGGCGACTATTCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR TCA 90 bp | AATTTAGACCTTCACCACCTGCCTCTTGGGTCTTCCGTCCTTCCACCTGTCCCTATCGGTAGCCAGACATaGTGCCTTCTTCCCAAAACA | + |
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Preference number: 4 (lower is better) Translates to: NLDLHHLPLGSSVLPPVPIGSQT*CLLPKT Trigger: TGTTTTGGGAAGAAGGCATCATGTCTGGCTACCGAT...AGGGACAGGTGGAAGGACGGAAGACCCAAGAGGCAGGTGGTGAAGGTCTAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS GCA 90 bp | AGACCAGCAGCGGTAGGTGGTATGGGTCCGCGCGAAAGCCCGGGCTaGCTAACGCCAGGAGGCGCCACAGGAAGTACCAGGTGGGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: RPAAVGGMGPRESPG*LTPGGATGSTRWAG Trigger: TCCTGCCCACCTGGTACTTCCTGTGGCGCCTCCTGGCGTTAGGCAGCCCGGGCTTTCGCGCGGACCCATACCACCTACCGCTGCTGGTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS-3UTR CAA 90 bp | GGCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCGTGCACAGGAAAGAGTaGAGCGCAGCAGCGGGCACG | + |
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Preference number: 5 (lower is better) Translates to: GPCQAGLFRGSETWPLPPVHRKE*SAAAGT Trigger: CGTGCCCGCTGCTGCGCTCAACTCTTTCCTGTGCAC...GGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS CCA 90 bp | AAAGGAAGCCTGAGAGCAGAGCGCAGAGGAGGTGGTAACCATGGTTaGAGCTCAGCGCGTCCCGCCCACAGCTGTGGGCCCCGCCCCAAC | + |
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Preference number: 5 (lower is better) Translates to: KGSLRAERRGGGNHG*SSARPAHSCGPRPN Trigger: GTTGGGGCGGGGCCCACAGCTGTGGGCGGGACGCGCTGAGCTCCAACCATGGTTACCACCTCCTCTGCGCTCTGCTCTCAGGCTTCCTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS CCA 90 bp | AGCCAGGCTCTGCGGGATCCCATATCAGCCAGCACCGCTTCCAGCTaGAAGTGGGTGCCCAGCACGGCACAGATATGGAACAGCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: SQALRDPISASTASS*KWVPSTAQIWNSWW Trigger: CCACCAGCTGTTCCATATCTGTGCCGTGCTGGGCACCCACTTCCAGCTGGAAGCGGTGCTGGCTGATATGGGATCCCGCAGAGCCTGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR CAA 90 bp | GGCCCATGTCAGGCAGGGCTCTTCCGAGGCAGTGAGACCTGGCCTCTCCCTCCCTTACTGTTGTTTAGCTaGGAGTCCCTCTTCCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: GPCQAGLFRGSETWPLPPLLLFS*ESLFQW Trigger: CCACTGGAAGAGGGACTCCAAGCTAAACAACAGTAA...GGGAGGGAGAGGCCAGGTCTCACTGCCTCGGAAGAGCCCTGCCTGACATGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS GCA 90 bp | CAAGGAGGCCGTGAAAGCAGCAATGATAAACAGGTTCCCAATCACTaGCAGGCTCAAGGTGGCTACAGTGGCCCCCAGACCCAGGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: QGGRESSNDKQVPNH*QAQGGYSGPQTQGG Trigger: CCCACCCTGGGTCTGGGGGCCACTGTAGCCACCTTGAGCCTGGCAGTGATTGGGAACCTGTTTATCATTGCTGCTTTCACGGCCTCCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS-3UTR CAA 90 bp | GACAAGAGGCACAGTCTGGCCCTGGGGCAGGGTGGGTATGTGGCCCCGATGGAATTACTGTTGTTTAGCTaGGAGTCCCTCTTCCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: DKRHSLALGQGGYVAPMELLLFS*ESLFQW Trigger: CCACTGGAAGAGGGACTCCAAGCTAAACAACAGTAA...TTCCATCGGGGCCACATACCCACCCTGCCCCAGGGCCAGACTGTGCCTCTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS TCA 90 bp | CTGAACCCGGGGTATTCTAGCTCTGGGAACCAGGTGGGCAGGAAGTaGGTCCAGATGTTGACCGTCTCATTAGTCATCTGGAAGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: LNPGYSSSGNQVGRK*VQMLTVSLVIWKEL Trigger: CAGCTCCTTCCAGATGACTAATGAGACGGTCAACATCTGGACTCACTTCCTGCCCACCTGGTTCCCAGAGCTAGAATACCCCGGGTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147948.8 |
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| CDS GCA 72 bp | GCGGTAGGTGGTATGGGTCCGCGCGAAAGCCCGGGCTaGCTAACGCCAGGAGGCGCCACAGGAAGTACCAGG | + |
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Preference number: 6 (lower is better) Translates to: AVGGMGPRESPG*LTPGGATGSTR Trigger: CCTGGTACTTCCTGTGGCGCCTCCTGGCGTTAGGCAGCCCGGGCTTTCGCGCGGACCCATACCACCTACCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS CCA 72 bp | AGGCAGGCGGGCAGTAGGAAGACCAGCAGCGGTAGGTaGTATGGGTCCGCGCGAAAGCCCGGGCTGCCTAAC | + |
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Preference number: 6 (lower is better) Translates to: RQAGSRKTSSGR*YGSARKPGLPN Trigger: GTTAGGCAGCCCGGGCTTTCGCGCGGACCCATACCACCTACCGCTGCTGGTCTTCCTACTGCCCGCCTGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS CCA 72 bp | GGTTCCCAATCACTGCCAGGCTCAAGGTGGCTACAGTaGCCCCCAGACCCAGGGTGGGCTCCTGCACGGCCA | + |
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Preference number: 6 (lower is better) Translates to: GSQSLPGSRWLQ*PPDPGWAPARP Trigger: TGGCCGTGCAGGAGCCCACCCTGGGTCTGGGGGCCACTGTAGCCACCTTGAGCCTGGCAGTGATTGGGAACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS CCA 72 bp | AGGAAAGAGTTGAGCGCAGCAGCGGGCACGAAGAGCTaGTGTAGGCGGCTGTGCAGCCAGGAGGCCGGCATG | + |
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Preference number: 6 (lower is better) Translates to: RKELSAAAGTKS*CRRLCSQEAGM Trigger: CATGCCGGCCTCCTGGCTGCACAGCCGCCTACACCAGCTCTTCGTGCCCGCTGCTGCGCTCAACTCTTTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147991.2 |
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| CDS GCA 72 bp | TGTTTAGCTTGGAGTCCCTCTTCCAGTGGGCTACCCTaGAGCAGGGGGCAGGGTCCAGGCATCCGCAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: CLAWSPSSSGLP*SRGQGPGIRSK Trigger: CTTGCTGCGGATGCCTGGACCCTGCCCCCTGCTGCAGGGTAGCCCACTGGAAGAGGGACTCCAAGCTAAACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS CCA 72 bp | CTGCGGGATCCCATATCAGCCAGCACCGCTTCCAGCTaGAAGTGGGTGCCCAGCACGGCACAGATATGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LRDPISASTASS*KWVPSTAQIWN Trigger: GTTCCATATCTGTGCCGTGCTGGGCACCCACTTCCAGCTGGAAGCGGTGCTGGCTGATATGGGATCCCGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS CCA 72 bp | GATCCCATATCAGCCAGCACCGCTTCCAGCTGGAAGTaGGTGCCCAGCACGGCACAGATATGGAACAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: DPISASTASSWK*VPSTAQIWNSW Trigger: CCAGCTGTTCCATATCTGTGCCGTGCTGGGCACCCACTTCCAGCTGGAAGCGGTGCTGGCTGATATGGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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| CDS GCA 72 bp | CGTGAAAGCAGCAATGATAAACAGGTTCCCAATCACTaGCAGGCTCAAGGTGGCTACAGTGGCCCCCAGACC | + |
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Preference number: 6 (lower is better) Translates to: RESSNDKQVPNH*QAQGGYSGPQT Trigger: GGTCTGGGGGCCACTGTAGCCACCTTGAGCCTGGCAGTGATTGGGAACCTGTTTATCATTGCTGCTTTCACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147948.8 ENSMUST00000147991.2 |
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