Pregenerated sensors for PAQR5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032278Ensembl transcript IDs: ENSMUST00000034817.11, ENSMUST00000113990.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACGCTTCGTCTGCGCACAGGACGCTGGCATTTTAAAATCAGTGTaGACGTCCGAGAGCCTTGCCTTCAAGCTTCCTGGCTTTATTTAC | + |
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Preference number: 1 (lower is better) Translates to: PRFVCAQDAGILKSV*TSESLAFKLPGFIY Trigger: GTAAATAAAGCCAGGAAGCTTGAAGGCAAGGCTCTCGGACGTGCACACTGATTTTAAAATGCCAGCGTCCTGTGCGCAGACGAAGCGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR GCA 90 bp | TTCCCTGGTGCTGGAATTATAGACATGAGCCACAGGACCAAGTTCTaGTGTGCTGAGGATCAAAACCAGAGCTTCAGTGTCTTGGCAACA | + |
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Preference number: 1 (lower is better) Translates to: FPGAGIIDMSHRTKF*CAEDQNQSFSVLAT Trigger: TGTTGCCAAGACACTGAAGCTCTGGTTTTGATCCTCAGCACAGCAGAACTTGGTCCTGTGGCTCATGTCTATAATTCCAGCACCAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR CCA 90 bp | TTCTGGGGAAGTGCTGCTGTCTACATTTCCCACACTTCCTACATTTaGTGTAGGAAAGCAGAAGCCCTAGTTTACCCCAGGAAATGCATG | + |
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Preference number: 1 (lower is better) Translates to: FWGSAAVYISHTSYI*CRKAEALVYPRKCM Trigger: CATGCATTTCCTGGGGTAAACTAGGGCTTCTGCTTTCCTACACCAAATGTAGGAAGTGTGGGAAATGTAGACAGCAGCACTTCCCCAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR GCA 90 bp | TACATTTGGTGTAGGAAAGCAGAAGCCCTAGTTTACCCCAGGAAATaGATGTCACAAGCTTACCCACCTGTGTGTTTCTGTGTCACAGGA | + |
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Preference number: 1 (lower is better) Translates to: YIWCRKAEALVYPRK*MSQAYPPVCFCVTG Trigger: TCCTGTGACACAGAAACACACAGGTGGGTAAGCTTGTGACATGCATTTCCTGGGGTAAACTAGGGCTTCTGCTTTCCTACACCAAATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR GCA 90 bp | CGCTGGCATTTTAAAATCAGTGTGCACGTCCGAGAGCCTTGCCTTCAAGCTTCCGCCTCCTCCCTCCTGTaGTGGGCTTCTGGGGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: RWHFKISVHVREPCLQASASSLL*WASGEV Trigger: CACTTCCCCAGAAGCCCAGCACAGGAGGGAGGAGGC...GGAAGCTTGAAGGCAAGGCTCTCGGACGTGCACACTGATTTTAAAATGCCAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR TCA 90 bp | AGGACCAAGTTCTGCTGTGCTGAGGATCAAAACCAGAGCTTCAGTGTCTTGGCAGCAGGCAGAGCTCTGTaGGTTCAAAGCCAGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RTKFCCAEDQNQSFSVLAAGRAL*VQSQPG Trigger: ACCAGGCTGGCTTTGAACTCACAGAGCTCTGCCTGC...TGCCAAGACACTGAAGCTCTGGTTTTGATCCTCAGCACAGCAGAACTTGGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR CCA 90 bp | CACTTACCCGTGCTTATGCGCTTAGGACTAGAGGCTGATGTCAGAATGTCTACTTCCTCCCTCCTGTGCTaGGCTTCTGGGGAAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: HLPVLMRLGLEADVRMSTSSLLC*ASGEVL Trigger: CAGCACTTCCCCAGAAGCCCAGCACAGGAGGGAGGA...AGTAGACATTCTGACATCAGCCTCTAGTCCTAAGCGCATAAGCACGGGTAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR GCA 90 bp | CGCTGGCATTTTAAAATCAGTGTGCACGTCCGAGAGCCTTGCCTTCAAGCTTCCGGCAGCATCTTGGCATaGCAACCCAATGTCAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: RWHFKISVHVREPCLQASGSILA*QPNVRH Trigger: ATGCCTGACATTGGGTTGGCATGCCAAGATGCTGCC...GGAAGCTTGAAGGCAAGGCTCTCGGACGTGCACACTGATTTTAAAATGCCAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR GCA 90 bp | CGCTGGCATTTTAAAATCAGTGTGCACGTCCGAGAGCCTTGCCTTCAAGCTTCCGGGCTTCTGGGGAAGTaGTGCTGTCTACATTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RWHFKISVHVREPCLQASGLLGK*CCLHFP Trigger: TGGGAAATGTAGACAGCAGCACTTCCCCAGAAGCCC...GGAAGCTTGAAGGCAAGGCTCTCGGACGTGCACACTGATTTTAAAATGCCAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR TCA 90 bp | CACTTACCCGTGCTTATGCGCTTAGGACTAGAGGCTGATGTCAGAATGTCTACTCTGGGATGGCATCAATaGGCTCCAGAGGCCATCACA | + |
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Preference number: 2 (lower is better) Translates to: HLPVLMRLGLEADVRMSTLGWHQ*APEAIT Trigger: TGTGATGGCCTCTGGAGCTCATTGATGCCATCCCAG...AGTAGACATTCTGACATCAGCCTCTAGTCCTAAGCGCATAAGCACGGGTAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR CCA 90 bp | CGCTGGCATTTTAAAATCAGTGTGCACGTCCGAGAGCCTTGCCTTCAAGCTTCCAGTCTGGCAGCATCTTaGCATGCCAACCCAATGTCA | + |
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Preference number: 2 (lower is better) Translates to: RWHFKISVHVREPCLQASSLAAS*HANPMS Trigger: TGACATTGGGTTGGCATGCCAAGATGCTGCCAGACT...GGAAGCTTGAAGGCAAGGCTCTCGGACGTGCACACTGATTTTAAAATGCCAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR CAA 90 bp | TGTCACAAGCTTACCCACCTGTGTGTTTCTGTGTCACAGGAAAGGTaGAAGACAGGACATTTGACTGTCCCACTGGTGAGGTCAACACCC | + |
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Preference number: 2 (lower is better) Translates to: CHKLTHLCVSVSQER*KTGHLTVPLVRSTP Trigger: GGGTGTTGACCTCACCAGTGGGACAGTCAAATGTCCTGTCTTCAACCTTTCCTGTGACACAGAAACACACAGGTGGGTAAGCTTGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR GCA 90 bp | CACTTACCCGTGCTTATGCGCTTAGGACTAGAGGCTGATGTCAGAATGTCTACTAATGTCTTCAGCATCTaGCTCCTCCCTCCTGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: HLPVLMRLGLEADVRMSTNVFSI*LLPPVL Trigger: CAGCACAGGAGGGAGGAGGCAGATGCTGAAGACATT...AGTAGACATTCTGACATCAGCCTCTAGTCCTAAGCGCATAAGCACGGGTAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR TCA 90 bp | CACCTGTGTGTTTCTGTGTCACAGGAAAGGTTGAAGACAGGACATTTGACTGTCCAACTACTTACCAACTaGGCTACACCTCCAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: HLCVSVSQERLKTGHLTVQLLTN*ATPPGP Trigger: AGGGCCTGGAGGTGTAGCTCAGTTGGTAAGTAGTTG...GACAGTCAAATGTCCTGTCTTCAACCTTTCCTGTGACACAGAAACACACAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR TCA 90 bp | CACCTGTGTGTTTCTGTGTCACAGGAAAGGTTGAAGACAGGACATTTGACTGTCAGCTCTTCCATTGCTTaGAAAAGGGACAGGGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: HLCVSVSQERLKTGHLTVSSSIA*KRDREP Trigger: GGGCTCCCTGTCCCTTTTTCAAGCAATGGAAGAGCT...GACAGTCAAATGTCCTGTCTTCAACCTTTCCTGTGACACAGAAACACACAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR CCA 90 bp | GTCCGAGAGCCTTGCCTTCAAGCTTCCTGGCTTTATTTACTTTTTAGTCTAGGGCTTTGTAGCAGGTCCTaGGGATCGAACTCCTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: VREPCLQASWLYLLFSLGLCSRS*GSNSCC Trigger: ACAACAGGAGTTCGATCCCCAGGACCTGCTACAAAG...CCCTAGACTAAAAAGTAAATAAAGCCAGGAAGCTTGAAGGCAAGGCTCTCGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR GCA 90 bp | CACTTACCCGTGCTTATGCGCTTAGGACTAGAGGCTGATGTCAGAATGTCTACTATTTTAAAATCAGTGTaGACGTCCGAGAGCCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: HLPVLMRLGLEADVRMSTILKSV*TSESLA Trigger: GGCAAGGCTCTCGGACGTGCACACTGATTTTAAAAT...AGTAGACATTCTGACATCAGCCTCTAGTCCTAAGCGCATAAGCACGGGTAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR GCA 90 bp | GTCCGAGAGCCTTGCCTTCAAGCTTCCTGGCTTTATTTACTTTTTAGTCTAGGGCAGAATCTGTGTGTGTaGAGAGAACTCTGCCCAATT | + |
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Preference number: 2 (lower is better) Translates to: VREPCLQASWLYLLFSLGQNLCV*RELCPI Trigger: AATTGGGCAGAGTTCTCTGCACACACACAGATTCTG...CCCTAGACTAAAAAGTAAATAAAGCCAGGAAGCTTGAAGGCAAGGCTCTCGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR GCA 90 bp | GTCCGAGAGCCTTGCCTTCAAGCTTCCTGGCTTTATTTACTTTTTAGTCTAGGGGAGGTCAACACCCTCTaGATAAATACTAAGTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: VREPCLQASWLYLLFSLGEVNTL*INTKSG Trigger: GCCAGACTTAGTATTTATGCAGAGGGTGTTGACCTC...CCCTAGACTAAAAAGTAAATAAAGCCAGGAAGCTTGAAGGCAAGGCTCTCGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR GCA 90 bp | TCCTACATTTGGTGTAGGAAAGCAGAAGCCCTAGTTTACCCCAGGAAATGCATGATTCTGCTTCCCTGGTaGTGGAATTATAGACATGAG | + |
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Preference number: 2 (lower is better) Translates to: SYIWCRKAEALVYPRKCMILLPW*WNYRHE Trigger: CTCATGTCTATAATTCCAGCACCAGGGAAGCAGAAT...CATGCATTTCCTGGGGTAAACTAGGGCTTCTGCTTTCCTACACCAAATGTAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR CCA 90 bp | CACCTGTGTGTTTCTGTGTCACAGGAAAGGTTGAAGACAGGACATTTGACTGTCACCATCTCACTCATCTaGGGGAAAAAGCTTAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: HLCVSVSQERLKTGHLTVTISLI*GKKLSY Trigger: ATAGCTAAGCTTTTTCCCCCAGATGAGTGAGATGGT...GACAGTCAAATGTCCTGTCTTCAACCTTTCCTGTGACACAGAAACACACAGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR CAA 90 bp | GGCAAAATGAGGAAGATGCCATGTTGTATAAGAACACAGCAGTATTaGGTTATAAGCATCAATAACAAGGTAACGTTGGTCCAAGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: GKMRKMPCCIRTQQY*VISINNKVTLVQGW Trigger: CCACCCTTGGACCAACGTTACCTTGTTATTGATGCTTATAACCAAATACTGCTGTGTTCTTATACAACATGGCATCTTCCTCATTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR CAA 90 bp | CTAGAGAGGCAGGGCAGTATGCTTAATATAACTGTTGGAATAGAATaGAGAACTATGTTTTTAGAGATACAATCTCATGCATCCGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: LERQGSMLNITVGIE*RTMFLEIQSHASED Trigger: ATCCTCGGATGCATGAGATTGTATCTCTAAAAACATAGTTCTCAATTCTATTCCAACAGTTATATTAAGCATACTGCCCTGCCTCTCTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR TCA 72 bp | CTCTCACTAAGCTGCTCTGTATGGATGCCTGGCCAGTaGGCTACCAGCACCTGCCTATCTTTGTTCCCAATG | + |
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Preference number: 3 (lower is better) Translates to: LSLSCSVWMPGQ*ATSTCLSLFPM Trigger: CATTGGGAACAAAGATAGGCAGGTGCTGGTAGCTCACTGGCCAGGCATCCATACAGAGCAGCTTAGTGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR GCA 72 bp | TCAGGCATGGGATGTCTCCAAAGACAGCTCTTCCATTaGTTGAAAAAGGGACAGGGAGCCCTAACAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SGMGCLQRQLFH*LKKGQGALTAG Trigger: CCCAGCTGTTAGGGCTCCCTGTCCCTTTTTCAAGCAATGGAAGAGCTGTCTTTGGAGACATCCCATGCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR CCA 72 bp | ACAGGACCTCTCACTAAGCTGCTCTGTATGGATGCCTaGCCAGTGAGCTACCAGCACCTGCCTATCTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: TGPLTKLLCMDA*PVSYQHLPIFV Trigger: AACAAAGATAGGCAGGTGCTGGTAGCTCACTGGCCAGGCATCCATACAGAGCAGCTTAGTGAGAGGTCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR CCA 72 bp | GTGCACATACAGAGTCTAGGCAAGGGTGAGTGTGCCTaGACACACTTACCCGTGCTTATGCGCTTAGGACTA | + |
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Preference number: 3 (lower is better) Translates to: VHIQSLGKGECA*THLPVLMRLGL Trigger: TAGTCCTAAGCGCATAAGCACGGGTAAGTGTGTCCAGGCACACTCACCCTTGCCTAGACTCTGTATGTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR CCA 72 bp | GCTGTGCTGAGGATCAAAACCAGAGCTTCAGTGTCTTaGCAACACACCTTTAATCCAGCGCTCAGGAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: AVLRIKTRASVS*QHTFNPALRSQ Trigger: CTGACTCCTGAGCGCTGGATTAAAGGTGTGTTGCCAAGACACTGAAGCTCTGGTTTTGATCCTCAGCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR CAA 90 bp | CGCTGGCATTTTAAAATCAGTGTGCACGTCCGAGAGCCTTGCCTTCAAGCTTCCAAGACAGCTCTTCCATaGCTTGAAAAAGGGACAGGG | + |
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Preference number: 3 (lower is better) Translates to: RWHFKISVHVREPCLQASKTALP*LEKGTG Trigger: CCCTGTCCCTTTTTCAAGCAATGGAAGAGCTGTCTT...GGAAGCTTGAAGGCAAGGCTCTCGGACGTGCACACTGATTTTAAAATGCCAGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR CCA 72 bp | CAAGGTAACGTTGGTCCAAGGGTGGACAGGCAGCTCTaGATAGAAGTCCTGCACAAGTATTATCTGTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: QGNVGPRVDRQL*IEVLHKYYLWK Trigger: CTTCCACAGATAATACTTGTGCAGGACTTCTATCCAGAGCTGCCTGTCCACCCTTGGACCAACGTTACCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR CAA 90 bp | CGCTGGCATTTTAAAATCAGTGTGCACGTCCGAGAGCCTTGCCTTCAAGCTTCCATGTCAAGACATCAGTaGCTACGAATGCTTTTGGCC | + |
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Preference number: 3 (lower is better) Translates to: RWHFKISVHVREPCLQASMSRHQ*LRMLLA Trigger: GGCCAAAAGCATTCGTAGCAACTGATGTCTTGACAT...GGAAGCTTGAAGGCAAGGCTCTCGGACGTGCACACTGATTTTAAAATGCCAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR CAA 90 bp | CACTTACCCGTGCTTATGCGCTTAGGACTAGAGGCTGATGTCAGAATGTCTACTTTGAAGACAGGACATTaGACTGTCCCACTGGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: HLPVLMRLGLEADVRMSTLKTGH*TVPLVR Trigger: CCTCACCAGTGGGACAGTCAAATGTCCTGTCTTCAA...AGTAGACATTCTGACATCAGCCTCTAGTCCTAAGCGCATAAGCACGGGTAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR GCA 72 bp | GCTGGAATTATAGACATGAGCCACAGGACCAAGTTCTaGTGTGCTGAGGATCAAAACCAGAGCTTCAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: AGIIDMSHRTKF*CAEDQNQSFSV Trigger: GACACTGAAGCTCTGGTTTTGATCCTCAGCACAGCAGAACTTGGTCCTGTGGCTCATGTCTATAATTCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR GCA 72 bp | CTCTGCATAAATACTAAGTCTGGCAGCATCTTGGCATaGCAACCCAATGTCAGGCATGGGATGTCTCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: LCINTKSGSILA*QPNVRHGMSPK Trigger: CTTTGGAGACATCCCATGCCTGACATTGGGTTGGCATGCCAAGATGCTGCCAGACTTAGTATTTATGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR CCA 72 bp | CCTTATCGATACTGTAGAATACTTTGTAGCAGGTCCTaGGGATCGAACTCCTGTTGTCAGCCTTGGCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: PYRYCRILCSRS*GSNSCCQPWQQ Trigger: TTGCTGCCAAGGCTGACAACAGGAGTTCGATCCCCAGGACCTGCTACAAAGTATTCTACAGTATCGATAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR CAA 90 bp | CACCTGTGTGTTTCTGTGTCACAGGAAAGGTTGAAGACAGGACATTTGACTGTCCTCCTGTTGTCAGCCTaGGCAGCAAGCTTCTTAACT | + |
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Preference number: 3 (lower is better) Translates to: HLCVSVSQERLKTGHLTVLLLSA*AASFLT Trigger: AGTTAAGAAGCTTGCTGCCAAGGCTGACAACAGGAG...GACAGTCAAATGTCCTGTCTTCAACCTTTCCTGTGACACAGAAACACACAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR TCA 72 bp | CAGGGCTCTGAATATTCTAGGCAACTACTTACCAACTaGGCTACACCTCCAGGCCCTAAACACCCCATTTTA | + |
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Preference number: 3 (lower is better) Translates to: QGSEYSRQLLTN*ATPPGPKHPIL Trigger: TAAAATGGGGTGTTTAGGGCCTGGAGGTGTAGCTCAGTTGGTAAGTAGTTGCCTAGAATATTCAGAGCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR CCA 72 bp | AGTGTGCACGTCCGAGAGCCTTGCCTTCAAGCTTCCTaGCTTTATTTACTTTTTAGTCTAGGGTCTAACCCA | + |
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Preference number: 3 (lower is better) Translates to: SVHVREPCLQAS*LYLLFSLGSNP Trigger: TGGGTTAGACCCTAGACTAAAAAGTAAATAAAGCCAGGAAGCTTGAAGGCAAGGCTCTCGGACGTGCACACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR-3UTR CAA 90 bp | CACCTGTGTGTTTCTGTGTCACAGGAAAGGTTGAAGACAGGACATTTGACTGTCAAGCTTCTTAACTCATaGAACCATCTCACTCATCTG | + |
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Preference number: 3 (lower is better) Translates to: HLCVSVSQERLKTGHLTVKLLNS*NHLTHL Trigger: CAGATGAGTGAGATGGTTCAATGAGTTAAGAAGCTT...GACAGTCAAATGTCCTGTCTTCAACCTTTCCTGTGACACAGAAACACACAGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| CDS-3UTR TCA 90 bp | CGCTGGCATTTTAAAATCAGTGTGCACGTCCGAGAGCCTTGCCTTCAAGCTTCCTCATTTGGAAGAGGCTaGGGATGCAGGCAGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RWHFKISVHVREPCLQASSFGRG*GCRQWR Trigger: CCGCCACTGCCTGCATCCTCAGCCTCTTCCAAATGA...GGAAGCTTGAAGGCAAGGCTCTCGGACGTGCACACTGATTTTAAAATGCCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| CDS-3UTR GCA 90 bp | GTCCGAGAGCCTTGCCTTCAAGCTTCCTGGCTTTATTTACTTTTTAGTCTAGGGGGACCCGGAGTAGCTTaGAGAGCCGGGGCTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: VREPCLQASWLYLLFSLGGPGVA*RAGASG Trigger: TCCAGAAGCCCCGGCTCTGCAAGCTACTCCGGGTCC...CCCTAGACTAAAAAGTAAATAAAGCCAGGAAGCTTGAAGGCAAGGCTCTCGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| CDS-3UTR CCA 90 bp | TCAAGACATCAGTTGCTACGAATGCTTTTGGCCACTGTAAGCCAGCACCACACCTGCTCATGGAACACCTaGGGCACCTGGTCTATGCGG | + |
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Preference number: 4 (lower is better) Translates to: SRHQLLRMLLATVSQHHTCSWNT*GTWSMR Trigger: CCGCATAGACCAGGTGCCCCAGGTGTTCCATGAGCA...GGTGTGGTGCTGGCTTACAGTGGCCAAAAGCATTCGTAGCAACTGATGTCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| CDS-3UTR CCA 90 bp | TCCTACATTTGGTGTAGGAAAGCAGAAGCCCTAGTTTACCCCAGGAAATGCATGAGAAGGGTCTGGAGGTaGCCAGGAGCCACTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SYIWCRKAEALVYPRKCMRRVWR*PGATPS Trigger: GGAGGGAGTGGCTCCTGGCCACCTCCAGACCCTTCT...CATGCATTTCCTGGGGTAAACTAGGGCTTCTGCTTTCCTACACCAAATGTAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| 3UTR CAA 72 bp | GGCATGGGATGTCTCCAAAGACAGCTCTTCCATTGCTaGAAAAAGGGACAGGGAGCCCTAACAGCTGGGATG | + |
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Preference number: 4 (lower is better) Translates to: GMGCLQRQLFHC*KKGQGALTAGM Trigger: CATCCCAGCTGTTAGGGCTCCCTGTCCCTTTTTCAAGCAATGGAAGAGCTGTCTTTGGAGACATCCCATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| CDS-3UTR TCA 90 bp | TCTGTGTCACAGGAAAGGTTGAAGACAGGACATTTGACTGTCCCACTGGTGAGGAGAGTAGGCGATGGCTaGGCCCAGGCTGAAGAGATT | + |
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Preference number: 4 (lower is better) Translates to: SVSQERLKTGHLTVPLVRRVGDG*AQAEEI Trigger: AATCTCTTCAGCCTGGGCTCAGCCATCGCCTACTCT...CCTCACCAGTGGGACAGTCAAATGTCCTGTCTTCAACCTTTCCTGTGACACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| CDS-3UTR GCA 90 bp | AGGACCAAGTTCTGCTGTGCTGAGGATCAAAACCAGAGCTTCAGTGTCTTGGCAAGGCCAGGAGAGTCATaGCCATGTGCTTCTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: RTKFCCAEDQNQSFSVLARPGES*PCASGG Trigger: ACCACCAGAAGCACATGGGCATGACTCTCCTGGCCT...TGCCAAGACACTGAAGCTCTGGTTTTGATCCTCAGCACAGCAGAACTTGGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| CDS-3UTR GCA 90 bp | CGCTGGCATTTTAAAATCAGTGTGCACGTCCGAGAGCCTTGCCTTCAAGCTTCCAGGATGGCTTCCATCTaGAAGTGTGTGGCCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: RWHFKISVHVREPCLQASRMASI*KCVARM Trigger: CATCCTGGCCACACACTTGCAGATGGAAGCCATCCT...GGAAGCTTGAAGGCAAGGCTCTCGGACGTGCACACTGATTTTAAAATGCCAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
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| CDS-3UTR CCA 90 bp | TCCTACATTTGGTGTAGGAAAGCAGAAGCCCTAGTTTACCCCAGGAAATGCATGAGGATGCCCTGCTCATaGAACACCTGGGGCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SYIWCRKAEALVYPRKCMRMPCS*NTWGTW Trigger: CCAGGTGCCCCAGGTGTTCCATGAGCAGGGCATCCT...CATGCATTTCCTGGGGTAAACTAGGGCTTCTGCTTTCCTACACCAAATGTAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR CCA 90 bp | AGGACCAAGTTCTGCTGTGCTGAGGATCAAAACCAGAGCTTCAGTGTCTTGGCACAGAGCCGGGGCTTCTaGAGTTCAAGAAACCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTKFCCAEDQNQSFSVLAQSRGF*SSRNLE Trigger: CTCCAGGTTTCTTGAACTCCAGAAGCCCCGGCTCTG...TGCCAAGACACTGAAGCTCTGGTTTTGATCCTCAGCACAGCAGAACTTGGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR TCA 90 bp | AGGACCAAGTTCTGCTGTGCTGAGGATCAAAACCAGAGCTTCAGTGTCTTGGCAGTAGAAGATGGGGAGTaGGTCCCAAGTGTAGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RTKFCCAEDQNQSFSVLAVEDGE*VPSVGV Trigger: TACCCCTACACTTGGGACTCACTCCCCATCTTCTAC...TGCCAAGACACTGAAGCTCTGGTTTTGATCCTCAGCACAGCAGAACTTGGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR GCA 90 bp | CGCTGGCATTTTAAAATCAGTGTGCACGTCCGAGAGCCTTGCCTTCAAGCTTCCGGTAACCAAAGAGGATaGCCTGCTCATGGAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: RWHFKISVHVREPCLQASGNQRG*PAHGTP Trigger: AGGTGTTCCATGAGCAGGGCATCCTCTTTGGTTACC...GGAAGCTTGAAGGCAAGGCTCTCGGACGTGCACACTGATTTTAAAATGCCAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR TCA 90 bp | TCAAGACATCAGTTGCTACGAATGCTTTTGGCCACTGTAAGCCAGCACCACACCCATGGCTTCATTTCTTaGACTCTCCCCTGGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SRHQLLRMLLATVSQHHTHGFIS*TLPWEQ Trigger: CTGTTCCCAGGGGAGAGTTCAAGAAATGAAGCCATG...GGTGTGGTGCTGGCTTACAGTGGCCAAAAGCATTCGTAGCAACTGATGTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR TCA 90 bp | CACTTACCCGTGCTTATGCGCTTAGGACTAGAGGCTGATGTCAGAATGTCTACTAGTGTGTGGCCAGGATaGCGCACACATGAAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLPVLMRLGLEADVRMSTSVWPG*RTHETA Trigger: AGCTGTTTCATGTGTGCGTCATCCTGGCCACACACT...AGTAGACATTCTGACATCAGCCTCTAGTCCTAAGCGCATAAGCACGGGTAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR TCA 90 bp | GTCCGAGAGCCTTGCCTTCAAGCTTCCTGGCTTTATTTACTTTTTAGTCTAGGGATGGCCGCTGCTATCTaGGGGAAAGAGAAGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VREPCLQASWLYLLFSLGMAAAI*GKEKGL Trigger: CAGACCCTTCTCTTTCCCTCAGATAGCAGCGGCCAT...CCCTAGACTAAAAAGTAAATAAAGCCAGGAAGCTTGAAGGCAAGGCTCTCGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR CCA 90 bp | CTGAGGATCAAAACCAGAGCTTCAGTGTCTTGGCAACACACCTTTAATCCAGCGGGGGGTACACGCAGCTaGTACACATGTACACAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRIKTRASVSWQHTFNPAGGTRS*YTCTQA Trigger: TGCTTGTGTACATGTGTACCAGCTGCGTGTACCCCC...CGCTGGATTAAAGGTGTGTTGCCAAGACACTGAAGCTCTGGTTTTGATCCTCAG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| 3UTR CAA 72 bp | GTTTCTGTGTCACAGGAAAGGTTGAAGACAGGACATTaGACTGTCCCACTGGTGAGGTCAACACCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSVSQERLKTGH*TVPLVRSTPSA Trigger: TGCAGAGGGTGTTGACCTCACCAGTGGGACAGTCAAATGTCCTGTCTTCAACCTTTCCTGTGACACAGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| 3UTR CAA 72 bp | CTTACCCACCTGTGTGTTTCTGTGTCACAGGAAAGGTaGAAGACAGGACATTTGACTGTCCCACTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTHLCVSVSQER*KTGHLTVPLVR Trigger: CCTCACCAGTGGGACAGTCAAATGTCCTGTCTTCAACCTTTCCTGTGACACAGAAACACACAGGTGGGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR GCA 90 bp | AGGACCAAGTTCTGCTGTGCTGAGGATCAAAACCAGAGCTTCAGTGTCTTGGCAGTCTGTCACATAGAGTaGAGTCATGAACCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RTKFCCAEDQNQSFSVLAVCHIE*SHEPPH Trigger: GTGTGGAGGTTCATGACTGCACTCTATGTGACAGAC...TGCCAAGACACTGAAGCTCTGGTTTTGATCCTCAGCACAGCAGAACTTGGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR CCA 90 bp | TCCTACATTTGGTGTAGGAAAGCAGAAGCCCTAGTTTACCCCAGGAAATGCATGGGAGTTCAAGAAACCTaGAGTAGCAGGAGAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SYIWCRKAEALVYPRKCMGVQET*SSRRGQ Trigger: CTGGCCTCTCCTGCTACTCCAGGTTTCTTGAACTCC...CATGCATTTCCTGGGGTAAACTAGGGCTTCTGCTTTCCTACACCAAATGTAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| 3UTR CAA 72 bp | CTGATGTCAGAATGTCTACTCCATTGCTTCCCCACCTaGCTGAAACAGGACCTCTCACTAAGCTGCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LMSECLLHCFPT*LKQDLSLSCSV Trigger: TACAGAGCAGCTTAGTGAGAGGTCCTGTTTCAGCAAGGTGGGGAAGCAATGGAGTAGACATTCTGACATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| 3UTR CAA 72 bp | TTAGGACTAGAGGCTGATGTCAGAATGTCTACTCCATaGCTTCCCCACCTTGCTGAAACAGGACCTCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LGLEADVRMSTP*LPHLAETGPLT Trigger: AGTGAGAGGTCCTGTTTCAGCAAGGTGGGGAAGCAATGGAGTAGACATTCTGACATCAGCCTCTAGTCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR GCA 90 bp | TCTGGGGAAGTGCTGCTGTCTACATTTCCCACACTTCCTACATTTGGTGTAGGAAGAGTCATGCCCATGTaGTTCTGGTGGTACAACATG | + |
|
Preference number: 4 (lower is better) Translates to: SGEVLLSTFPTLPTFGVGRVMPM*FWWYNM Trigger: CATGTTGTACCACCAGAAGCACATGGGCATGACTCT...TCCTACACCAAATGTAGGAAGTGTGGGAAATGTAGACAGCAGCACTTCCCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR CCA 90 bp | TCTGGGGAAGTGCTGCTGTCTACATTTCCCACACTTCCTACATTTGGTGTAGGAGTCTCATTGGTCATTTaGAAGAGGCTGAGGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGEVLLSTFPTLPTFGVGVSLVI*KRLRMQ Trigger: CTGCATCCTCAGCCTCTTCCAAATGACCAATGAGAC...TCCTACACCAAATGTAGGAAGTGTGGGAAATGTAGACAGCAGCACTTCCCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR TCA 90 bp | TCCTACATTTGGTGTAGGAAAGCAGAAGCCCTAGTTTACCCCAGGAAATGCATGCATAGAGTGCAGTCATaGACCTCCACACAAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SYIWCRKAEALVYPRKCMHRVQS*TSTQRT Trigger: GGTTCTTTGTGTGGAGGTTCATGACTGCACTCTATG...CATGCATTTCCTGGGGTAAACTAGGGCTTCTGCTTTCCTACACCAAATGTAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR CCA 90 bp | TCCTACATTTGGTGTAGGAAAGCAGAAGCCCTAGTTTACCCCAGGAAATGCATGATGCCCATGTGCTTCTaGTGGTACAACATGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SYIWCRKAEALVYPRKCMMPMCF*WYNMAS Trigger: TGAAGCCATGTTGTACCACCAGAAGCACATGGGCAT...CATGCATTTCCTGGGGTAAACTAGGGCTTCTGCTTTCCTACACCAAATGTAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR CCA 90 bp | CACCTGTGTGTTTCTGTGTCACAGGAAAGGTTGAAGACAGGACATTTGACTGTCTCTTGTCCAGAAGGATaGCTTCCATCTGCAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HLCVSVSQERLKTGHLTVSCPEG*LPSASV Trigger: CACACTTGCAGATGGAAGCCATCCTTCTGGACAAGA...GACAGTCAAATGTCCTGTCTTCAACCTTTCCTGTGACACAGAAACACACAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR GCA 90 bp | ATCCAGGACTTATGCTCAAATTCTACCTTTTACAGAACACATACAGAATCTGTGAGAGCTGAATGTGTGTaGACAGCTGGAGGCGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IQDLCSNSTFYRTHTESVRAECV*TAGGEG Trigger: CCCCTCGCCTCCAGCTGTGCACACACATTCAGCTCT...CACAGATTCTGTATGTGTTCTGTAAAAGGTAGAATTTGAGCATAAGTCCTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR CCA 90 bp | GTCCGAGAGCCTTGCCTTCAAGCTTCCTGGCTTTATTTACTTTTTAGTCTAGGGCCCATGTGCTTCTGGTaGTACAACATGGCTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VREPCLQASWLYLLFSLGPMCFW*YNMASF Trigger: AAATGAAGCCATGTTGTACCACCAGAAGCACATGGG...CCCTAGACTAAAAAGTAAATAAAGCCAGGAAGCTTGAAGGCAAGGCTCTCGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| 3UTR CAA 72 bp | AAGGGATTGTCGCACAAGGCTATGGCCTTAGCAGAGTaGGCTTTTGGGTTTTTGCTGTTCTTGATGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGLSHKAMALAE*AFGFLLFLMFC Trigger: ACAGAACATCAAGAACAGCAAAAACCCAAAAGCCAACTCTGCTAAGGCCATAGCCTTGTGCGACAATCCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR TCA 90 bp | ATCCAGGACTTATGCTCAAATTCTACCTTTTACAGAACACATACAGAATCTGTGAGGAGAGGCCAGTGCTaGGAATGGTGTTTAGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: IQDLCSNSTFYRTHTESVRRGQC*EWCLAR Trigger: CCGTGCTAAACACCATTCTCAGCACTGGCCTCTCCT...CACAGATTCTGTATGTGTTCTGTAAAAGGTAGAATTTGAGCATAAGTCCTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR GCA 90 bp | ATCCAGGACTTATGCTCAAATTCTACCTTTTACAGAACACATACAGAATCTGTGGGTACTGCAGACCAGTaGATCAGGGAACGTGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: IQDLCSNSTFYRTHTESVGTADQ*IRERVC Trigger: GCATACACGTTCCCTGATGCACTGGTCTGCAGTACC...CACAGATTCTGTATGTGTTCTGTAAAAGGTAGAATTTGAGCATAAGTCCTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| 3UTR CAA 72 bp | AGGAAGATGCCATGTTGTATAAGAACACAGCAGTATTaGGTTATAAGCATCAATAACAAGGTAACGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKMPCCIRTQQY*VISINNKVTLV Trigger: GACCAACGTTACCTTGTTATTGATGCTTATAACCAAATACTGCTGTGTTCTTATACAACATGGCATCTTCCT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS CCA 90 bp | GAAGCATGGCCGCTGCTATCTGAGGGAAAGAGAAGGGTCTGGAGGTaGCCAGGAGCCACTCCCTCCTCAGGGTCTTGTCCAGAAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: EAWPLLSEGKRRVWR*PGATPSSGSCPEGW Trigger: CCATCCTTCTGGACAAGACCCTGAGGAGGGAGTGGCTCCTGGCCACCTCCAGACCCTTCTCTTTCCCTCAGATAGCAGCGGCCATGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034817.11 ENSMUST00000113990.2 |
||
| CDS CCA 90 bp | TGCACAGAAGCATGGCCGCTGCTATCTGAGGGAAAGAGAAGGGTCTaGAGGTGGCCAGGAGCCACTCCCTCCTCAGGGTCTTGTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CTEAWPLLSEGKRRV*RWPGATPSSGSCPE Trigger: TTCTGGACAAGACCCTGAGGAGGGAGTGGCTCCTGGCCACCTCCAGACCCTTCTCTTTCCCTCAGATAGCAGCGGCCATGCTTCTGTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034817.11 ENSMUST00000113990.2 |
||
| CDS GCA 90 bp | ATAGCAGATATGCCGGGCGTTCTTGGACATAGAGCTGAATGTGTGTaGACAGCTGGAGGCGAGGGGGTACACGCAGCTGGTACACATGTA | + |
|
Preference number: 5 (lower is better) Translates to: IADMPGVLGHRAECV*TAGGEGVHAAGTHV Trigger: TACATGTGTACCAGCTGCGTGTACCCCCTCGCCTCCAGCTGTGCACACACATTCAGCTCTATGTCCAAGAACGCCCGGCATATCTGCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034817.11 ENSMUST00000113990.2 |
||
| CDS-3UTR CAA 90 bp | TCCTACATTTGGTGTAGGAAAGCAGAAGCCCTAGTTTACCCCAGGAAATGCATGAGGACCCGGAGTAGCTaGCAGAGCCGGGGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SYIWCRKAEALVYPRKCMRTRSS*QSRGFW Trigger: CCAGAAGCCCCGGCTCTGCAAGCTACTCCGGGTCCT...CATGCATTTCCTGGGGTAAACTAGGGCTTCTGCTTTCCTACACCAAATGTAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS CCA 90 bp | AAGAGGCCAGGAGAGTCATGCCCATGTGCTTCTGGTGGTACAACATaGCTTCATTTCTTGAACTCTCCCCTGGGAACAGGAAGAGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KRPGESCPCASGGTT*LHFLNSPLGTGRAC Trigger: ACAGGCTCTTCCTGTTCCCAGGGGAGAGTTCAAGAAATGAAGCCATGTTGTACCACCAGAAGCACATGGGCATGACTCTCCTGGCCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034817.11 ENSMUST00000113990.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGGGAAGTGCTGCTGTCTACATTTCCCACACTTCCTACATTTGGTGTAGGATCCCTCCTCAGGGTCTaGTCCAGAAGGATGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGEVLLSTFPTLPTFGVGSLLRV*SRRMAS Trigger: GGAAGCCATCCTTCTGGACAAGACCCTGAGGAGGGA...TCCTACACCAAATGTAGGAAGTGTGGGAAATGTAGACAGCAGCACTTCCCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS TCA 90 bp | AGTCATGCCCATGTGCTTCTGGTGGTACAACATGGCTTCATTTCTTaGACTCTCCCCTGGGAACAGGAAGAGCCTGTAGAAGATGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SHAHVLLVVQHGFIS*TLPWEQEEPVEDGE Trigger: CTCCCCATCTTCTACAGGCTCTTCCTGTTCCCAGGGGAGAGTTCAAGAAATGAAGCCATGTTGTACCACCAGAAGCACATGGGCATGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034817.11 ENSMUST00000113990.2 |
||
| CDS-3UTR CAA 90 bp | CGCTGGCATTTTAAAATCAGTGTGCACGTCCGAGAGCCTTGCCTTCAAGCTTCCGGTCTCATTGGTCATTaGGAAGAGGCTGAGGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: RWHFKISVHVREPCLQASGLIGH*EEAEDA Trigger: TGCATCCTCAGCCTCTTCCAAATGACCAATGAGACC...GGAAGCTTGAAGGCAAGGCTCTCGGACGTGCACACTGATTTTAAAATGCCAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS TCA 90 bp | ACGAGTAGCTGTCATTCTGGATGTCTGTCACATAGAGTGCAGTCATaGACCTCCACACAAAGAACCAGAAGGGTAGCAAGTGCGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TSSCHSGCLSHRVQS*TSTQRTRRVASASR Trigger: TCTGGACGCACTTGCTACCCTTCTGGTTCTTTGTGTGGAGGTTCATGACTGCACTCTATGTGACAGACATCCAGAATGACAGCTACTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034817.11 ENSMUST00000113990.2 |
||
| CDS-3UTR CAA 90 bp | AGGACCAAGTTCTGCTGTGCTGAGGATCAAAACCAGAGCTTCAGTGTCTTGGCAATGTTGAGGGTCTCATaGGTCATTTGGAAGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RTKFCCAEDQNQSFSVLAMLRVS*VIWKRL Trigger: CAGCCTCTTCCAAATGACCAATGAGACCCTCAACAT...TGCCAAGACACTGAAGCTCTGGTTTTGATCCTCAGCACAGCAGAACTTGGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS-3UTR CAA 90 bp | CACCTGTGTGTTTCTGTGTCACAGGAAAGGTTGAAGACAGGACATTTGACTGTCATATGCCGGGCGTTCTaGGACATAGAGCTGAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: HLCVSVSQERLKTGHLTVICRAF*DIELNV Trigger: CACATTCAGCTCTATGTCCAAGAACGCCCGGCATAT...GACAGTCAAATGTCCTGTCTTCAACCTTTCCTGTGACACAGAAACACACAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS CCA 72 bp | GCATGGCCGCTGCTATCTGAGGGAAAGAGAAGGGTCTaGAGGTGGCCAGGAGCCACTCCCTCCTCAGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AWPLLSEGKRRV*RWPGATPSSGS Trigger: AGACCCTGAGGAGGGAGTGGCTCCTGGCCACCTCCAGACCCTTCTCTTTCCCTCAGATAGCAGCGGCCATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034817.11 ENSMUST00000113990.2 |
||
| CDS GCA 72 bp | TGTAGGGGTAGGCGAAGGCCAGGACCCGGAGTAGCTTaGAGAGCCGGGGCTTCTGGAGTTCAAGAAACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CRGRRRPGPGVA*RAGASGVQETW Trigger: CCAGGTTTCTTGAACTCCAGAAGCCCCGGCTCTGCAAGCTACTCCGGGTCCTGGCCTTCGCCTACCCCTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034817.11 ENSMUST00000113990.2 |
||
| CDS CCA 72 bp | TGTGTGCACAGCTGGAGGCGAGGGGGTACACGCAGCTaGTACACATGTACACAAGCATCGGCCACGAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: CVHSWRRGGTRS*YTCTQASATSS Trigger: GCTACTCGTGGCCGATGCTTGTGTACATGTGTACCAGCTGCGTGTACCCCCTCGCCTCCAGCTGTGCACACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034817.11 ENSMUST00000113990.2 |
||
| CDS GCA 72 bp | GCTGAGGCTGAAGATGATGCACAGAAGCATGGCCGCTaGTATCTGAGGGAAAGAGAAGGGTCTGGAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: AEAEDDAQKHGR*YLREREGSGGG Trigger: GCCACCTCCAGACCCTTCTCTTTCCCTCAGATAGCAGCGGCCATGCTTCTGTGCATCATCTTCAGCCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034817.11 ENSMUST00000113990.2 |
||
| CDS CCA 72 bp | AAGAGGATGCCCTGCTCATGGAACACCTGGGGCACCTaGTCTATGCGGAATAGCCTAGGGAGCTTTAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: KRMPCSWNTWGT*SMRNSLGSFRL Trigger: GAGCCTAAAGCTCCCTAGGCTATTCCGCATAGACCAGGTGCCCCAGGTGTTCCATGAGCAGGGCATCCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034817.11 |
||
| CDS GCA 72 bp | TGCTACGTAGCACTCATGGAAGGTACTGCAGACCAGTaGATCAGGGAACGTGTATGCAGAGTAGGCGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: CYVALMEGTADQ*IRERVCRVGDG Trigger: GCCATCGCCTACTCTGCATACACGTTCCCTGATGCACTGGTCTGCAGTACCTTCCATGAGTGCTACGTAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034817.11 ENSMUST00000113990.2 |
||
| CDS CCA 72 bp | GGAGAGTCATGCCCATGTGCTTCTGGTGGTACAACATaGCTTCATTTCTTGAACTCTCCCCTGGGAACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GESCPCASGGTT*LHFLNSPLGTG Trigger: TCCTGTTCCCAGGGGAGAGTTCAAGAAATGAAGCCATGTTGTACCACCAGAAGCACATGGGCATGACTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034817.11 ENSMUST00000113990.2 |
||
| CDS CCA 72 bp | AAAGAGGCCAGGAGAGTCATGCCCATGTGCTTCTGGTaGTACAACATGGCTTCATTTCTTGAACTCTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: KEARRVMPMCFW*YNMASFLELSP Trigger: AGGGGAGAGTTCAAGAAATGAAGCCATGTTGTACCACCAGAAGCACATGGGCATGACTCTCCTGGCCTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034817.11 ENSMUST00000113990.2 |
||
| CDS TCA 72 bp | CATGTGCTTCTGGTGGTACAACATGGCTTCATTTCTTaGACTCTCCCCTGGGAACAGGAAGAGCCTGTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: HVLLVVQHGFIS*TLPWEQEEPVE Trigger: TTCTACAGGCTCTTCCTGTTCCCAGGGGAGAGTTCAAGAAATGAAGCCATGTTGTACCACCAGAAGCACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034817.11 ENSMUST00000113990.2 |
||
| CDS GCA 72 bp | CGAGTAGCTGTCATTCTGGATGTCTGTCACATAGAGTaGAGTCATGAACCTCCACACAAAGAACCAGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RVAVILDVCHIE*SHEPPHKEPEG Trigger: CCCTTCTGGTTCTTTGTGTGGAGGTTCATGACTGCACTCTATGTGACAGACATCCAGAATGACAGCTACTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034817.11 ENSMUST00000113990.2 |
||
| CDS TCA 72 bp | TGTCATTCTGGATGTCTGTCACATAGAGTGCAGTCATaGACCTCCACACAAAGAACCAGAAGGGTAGCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: CHSGCLSHRVQS*TSTQRTRRVAS Trigger: ACTTGCTACCCTTCTGGTTCTTTGTGTGGAGGTTCATGACTGCACTCTATGTGACAGACATCCAGAATGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034817.11 ENSMUST00000113990.2 |
||