Pregenerated sensors for PAQR4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023909Ensembl transcript IDs: ENSMUST00000024702.5
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCTTCTTGTCCCTTTATTGATGTTGCCTAGGGTCTTGGGCCTTTaGGATGATCTGGCTGCGAGTCAGTACCCTTGGGCCAGCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: ALLVPLLMLPRVLGL*DDLAASQYPWASRL Trigger: CAGCCTGCTGGCCCAAGGGTACTGACTCGCAGCCAGATCATCCCAAAGGCCCAAGACCCTAGGCAACATCAATAAAGGGACAAGAAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR TCA 90 bp | CAAGTCTCTGGTAGGCAGGTCAGTCAGACCATGGCACTGAAGAGCTaGGTCCTTGGTCCAGTGAAGCCCGAATCCAACACCTCCATTCCA | + |
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Preference number: 1 (lower is better) Translates to: QVSGRQVSQTMALKS*VLGPVKPESNTSIP Trigger: TGGAATGGAGGTGTTGGATTCGGGCTTCACTGGACCAAGGACTCAGCTCTTCAGTGCCATGGTCTGACTGACCTGCCTACCAGAGACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR GCA 90 bp | GACCAATGTCCACTTGGCTCTGAGAGAAGCCTGGTCCCACTCCTCTaGATCCTCACTGCAGGAATGACAGGAACAGCAAAATTCTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: DQCPLGSERSLVPLL*ILTAGMTGTAKFWL Trigger: CAGCCAGAATTTTGCTGTTCCTGTCATTCCTGCAGTGAGGATGCAGAGGAGTGGGACCAGGCTTCTCTCAGAGCCAAGTGGACATTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CCA 90 bp | GCAAAATTCTGGCTGCTGAGAGGTTTGACATGCAGAGCAGGGAGATaGAGGTCAGGAAGCAGGGTCAGAGTGGCTAGCTCAAGAATCCAG | + |
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Preference number: 1 (lower is better) Translates to: AKFWLLRGLTCRAGR*RSGSRVRVASSRIQ Trigger: CTGGATTCTTGAGCTAGCCACTCTGACCCTGCTTCCTGACCTCCATCTCCCTGCTCTGCATGTCAAACCTCTCAGCAGCCAGAATTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CCA 90 bp | CTCCTCTGCATCCTCACTGCAGGAATGACAGGAACAGCAAAATTCTaGCTGCTGAGAGGTTTGACATGCAGAGCAGGGAGATGGAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: LLCILTAGMTGTAKF*LLRGLTCRAGRWRS Trigger: TGACCTCCATCTCCCTGCTCTGCATGTCAAACCTCTCAGCAGCCAGAATTTTGCTGTTCCTGTCATTCCTGCAGTGAGGATGCAGAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CCA 90 bp | ACCTCTCCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTaGGAACACCCAAGGTTGCTCATGTGGCAGCATAGCTCTTCTTGT | + |
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Preference number: 1 (lower is better) Translates to: TSPLKLPCLIKSNAS*EHPRLLMWQHSSSC Trigger: ACAAGAAGAGCTATGCTGCCACATGAGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAGTTTCAGGGGAGAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCAGCCTTGGTGCTTTTAAACCTCTGACCGTCTTGCCCACCTCTCCCCTGGTCAGACCATGGCACTaGAGAGCTGAGTCCTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: PASLGAFKPLTVLPTSPLVRPWH*RAESLV Trigger: GACCAAGGACTCAGCTCTTCAGTGCCATGGTCTGAC...CAGGGGAGAGGTGGGCAAGACGGTCAGAGGTTTAAAAGCACCAAGGCTGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR CCA 90 bp | TCACTCTCCCCAGAGACCGTCCTGTCCCGGATCACTAGAAGAACCTCTACCCCTGCTCTGAGAGAAGCCTaGTCCCACTCCTCTGCATCC | + |
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Preference number: 2 (lower is better) Translates to: SLSPETVLSRITRRTSTPALREA*SHSSAS Trigger: GGATGCAGAGGAGTGGGACCAGGCTTCTCTCAGAGC...AGGGGTAGAGGTTCTTCTAGTGATCCGGGACAGGACGGTCTCTGGGGAGAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CAA 90 bp | CCTCCTGTCTCCTGGCCAGATGATACAAGCAGGACCAATGTCCACTaGGCTCTGAGAGAAGCCTGGTCCCACTCCTCTGCATCCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: PPVSWPDDTSRTNVH*ALREAWSHSSASSL Trigger: CAGTGAGGATGCAGAGGAGTGGGACCAGGCTTCTCTCAGAGCCAAGTGGACATTGGTCCTGCTTGTATCATCTGGCCAGGAGACAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR TCA 90 bp | TATCCTACTTTGCCCAACCGTCACCACCCTGCTTGTCCTCTTTCTTGTAGTCCCTCCCTGCCCCACCTTTaGGCCAAGGAACCTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: YPTLPNRHHPACPLSCSPSLPHL*AKEPPQ Trigger: CTGAGGAGGTTCCTTGGCTCAAAGGTGGGGCAGGGA...GGGACTACAAGAAAGAGGACAAGCAGGGTGGTGACGGTTGGGCAAAGTAGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGCCAGCCTTGGTGCTTTTAAACCTCTGACCGTCTTGCCCACCTCTCCCCTGCACAGCTGTGCCTGTTaGCTAGGAAAAGCAGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: PASLGAFKPLTVLPTSPLHSCAC*LGKAAV Trigger: AACTGCTGCTTTTCCTAGGCAACAGGCACAGCTGTG...CAGGGGAGAGGTGGGCAAGACGGTCAGAGGTTTAAAAGCACCAAGGCTGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CAA 90 bp | GGCAGCATAGCTCTTCTTGTCCCTTTATTGATGTTGCCTAGGGTCTaGGGCCTTTGGGATGATCTGGCTGCGAGTCAGTACCCTTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: GSIALLVPLLMLPRV*GLWDDLAASQYPWA Trigger: GGCCCAAGGGTACTGACTCGCAGCCAGATCATCCCAAAGGCCCAAGACCCTAGGCAACATCAATAAAGGGACAAGAAGAGCTATGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCAGCCTTGGTGCTTTTAAACCTCTGACCGTCTTGCCCACCTCTCCCCTGATCCATGGGGAAGAATaGAGAATGGTCTCCCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: PASLGAFKPLTVLPTSPLIHGEE*RMVSQL Trigger: TAGCTGGGAGACCATTCTTCATTCTTCCCCATGGAT...CAGGGGAGAGGTGGGCAAGACGGTCAGAGGTTTAAAAGCACCAAGGCTGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR TCA 90 bp | AGCAGAGGCCTGAAACAAGGAGGAGCAGGGCTGTTTATATCCTACTTTGCCCAACCTCCTCAGCCTGTTTaGGGACTCCCTAGACCCAGC | + |
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Preference number: 2 (lower is better) Translates to: SRGLKQGGAGLFISYFAQPPQPV*GLPRPS Trigger: GCTGGGTCTAGGGAGTCCTCAAACAGGCTGAGGAGG...TTGGGCAAAGTAGGATATAAACAGCCCTGCTCCTCCTTGTTTCAGGCCTCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCAGCCTTGGTGCTTTTAAACCTCTGACCGTCTTGCCCACCTCTCCCCTGTGGGGTTTGAAGGCCTaGATGCAAGAAGTGAATCCA | + |
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Preference number: 2 (lower is better) Translates to: PASLGAFKPLTVLPTSPLWGLKA*MQEVNP Trigger: TGGATTCACTTCTTGCATCCAGGCCTTCAAACCCCA...CAGGGGAGAGGTGGGCAAGACGGTCAGAGGTTTAAAAGCACCAAGGCTGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR GCA 90 bp | TATCCTACTTTGCCCAACCGTCACCACCCTGCTTGTCCTCTTTCTTGTAGTCCCAGGGAACCAGCCCCTTaGAGACCAGTAGGAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: YPTLPNRHHPACPLSCSPREPAP*RPVGGK Trigger: CTTTCCTCCTACTGGTCTGCAAGGGGCTGGTTCCCT...GGGACTACAAGAAAGAGGACAAGCAGGGTGGTGACGGTTGGGCAAAGTAGGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR GCA 90 bp | CCTGAAACAAGGAGGAGCAGGGCTGTTTATATCCTACTTTGCCCAACCGTCACCCTGGTCCCACTCCTCTaGATCCTCACTGCAGGAATG | + |
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Preference number: 2 (lower is better) Translates to: PETRRSRAVYILLCPTVTLVPLL*ILTAGM Trigger: CATTCCTGCAGTGAGGATGCAGAGGAGTGGGACCAG...GGTGACGGTTGGGCAAAGTAGGATATAAACAGCCCTGCTCCTCCTTGTTTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR CCA 90 bp | CCTGAAACAAGGAGGAGCAGGGCTGTTTATATCCTACTTTGCCCAACCGTCACCTTGTCCAGGAAGCTGTaGGCAAGCCAGTTTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: PETRRSRAVYILLCPTVTLSRKL*ASQFGS Trigger: GCTGCCAAACTGGCTTGCCCACAGCTTCCTGGACAA...GGTGACGGTTGGGCAAAGTAGGATATAAACAGCCCTGCTCCTCCTTGTTTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CAA 90 bp | ACTGCAGGAATGACAGGAACAGCAAAATTCTGGCTGCTGAGAGGTTaGACATGCAGAGCAGGGAGATGGAGGTCAGGAAGCAGGGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: TAGMTGTAKFWLLRG*TCRAGRWRSGSRVR Trigger: TCTGACCCTGCTTCCTGACCTCCATCTCCCTGCTCTGCATGTCAAACCTCTCAGCAGCCAGAATTTTGCTGTTCCTGTCATTCCTGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR TCA 90 bp | CCTGAAACAAGGAGGAGCAGGGCTGTTTATATCCTACTTTGCCCAACCGTCACCGTGCTTTTAAACCTCTaGCCGTCTTGCCCACCTCTC | + |
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Preference number: 2 (lower is better) Translates to: PETRRSRAVYILLCPTVTVLLNL*PSCPPL Trigger: GAGAGGTGGGCAAGACGGTCAGAGGTTTAAAAGCAC...GGTGACGGTTGGGCAAAGTAGGATATAAACAGCCCTGCTCCTCCTTGTTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CAA 90 bp | ACAATGCCCAGGAGGGAAGATGGCAAGGAAAGTGGAAGCTGGGGTTaGAAGGCCTGGATGCAAGAAGTGAATCCATGGGGAAGAATGAAG | + |
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Preference number: 2 (lower is better) Translates to: TMPRREDGKESGSWG*KAWMQEVNPWGRMK Trigger: CTTCATTCTTCCCCATGGATTCACTTCTTGCATCCAGGCCTTCAAACCCCAGCTTCCACTTTCCTTGCCATCTTCCCTCCTGGGCATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTCTTGTCCCTTTATTGATGTTGCCTAGGGTCTTGGGCCTTTGGGATGATGAAGCAGGGTCAGAGTaGCTAGCTCAAGAATCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ALLVPLLMLPRVLGLWDDEAGSE*LAQESR Trigger: CCTGGATTCTTGAGCTAGCCACTCTGACCCTGCTTC...ATCATCCCAAAGGCCCAAGACCCTAGGCAACATCAATAAAGGGACAAGAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCTCATGAGGGTCTTGGGCCTTTaGGATGATCTGGCTGCGAGT | + |
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Preference number: 2 (lower is better) Translates to: LPCLIKSNASWEHPRLLMRVLGL*DDLAAS Trigger: ACTCGCAGCCAGATCATCCCAAAGGCCCAAGACCCT...CATGAGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR GCA 90 bp | CTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCTCATGCTGAGAGGTTTGACATaGAGAGCAGGGAGATGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LPCLIKSNASWEHPRLLMLRGLT*RAGRWR Trigger: CCTCCATCTCCCTGCTCTGCATGTCAAACCTCTCAG...CATGAGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCTCATGAGATGGCAAGGAAAGTaGAAGCTGGGGTTTGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LPCLIKSNASWEHPRLLMRWQGK*KLGFEG Trigger: GCCTTCAAACCCCAGCTTCCACTTTCCTTGCCATCT...CATGAGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR CCA 90 bp | CTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCTCATGTGGCAGCATGGAGGCTTGGTAAGTTaGCAGGACTCAACTGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: LIKSNASWEHPRLLMWQHGGLVS*QDSTVR Trigger: TCTGACAGTTGAGTCCTGCCAACTTACCAAGCCTCC...ATGCTGCCACATGAGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCTCATGGGAACAGCAAAATTCTaGCTGCTGAGAGGTTTGACA | + |
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Preference number: 2 (lower is better) Translates to: LPCLIKSNASWEHPRLLMGTAKF*LLRGLT Trigger: TGTCAAACCTCTCAGCAGCCAGAATTTTGCTGTTCC...CATGAGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CAA 90 bp | CTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTaGCTCATGTGGCAGCATAGCTCTTCTTGTCCCTTTATTGATGTT | + |
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Preference number: 2 (lower is better) Translates to: LPCLIKSNASWEHPR*LMWQHSSSCPFIDV Trigger: AACATCAATAAAGGGACAAGAAGAGCTATGCTGCCACATGAGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR CCA 90 bp | CTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCTCATGTGGCAGCATCAAGAAGTGAATCCATaGGGAAGAATGAAGAATGGT | + |
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Preference number: 2 (lower is better) Translates to: LIKSNASWEHPRLLMWQHQEVNP*GRMKNG Trigger: ACCATTCTTCATTCTTCCCCATGGATTCACTTCTTG...ATGCTGCCACATGAGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR TCA 72 bp | GGTAGGCAGGTCAGTCAGACCATGGCACTGAAGAGCTaGGTCCTTGGTCCAGTGAAGCCCGAATCCAACACC | + |
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Preference number: 3 (lower is better) Translates to: GRQVSQTMALKS*VLGPVKPESNT Trigger: GGTGTTGGATTCGGGCTTCACTGGACCAAGGACTCAGCTCTTCAGTGCCATGGTCTGACTGACCTGCCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR CAA 90 bp | CCTGAAACAAGGAGGAGCAGGGCTGTTTATATCCTACTTTGCCCAACCGTCACCGCCCGGGGTCTAGGCTaGGGCACGGTTTTCTTTAGG | + |
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Preference number: 3 (lower is better) Translates to: PETRRSRAVYILLCPTVTARGLG*GTVFFR Trigger: CCTAAAGAAAACCGTGCCCAAGCCTAGACCCCGGGC...GGTGACGGTTGGGCAAAGTAGGATATAAACAGCCCTGCTCCTCCTTGTTTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR GCA 72 bp | GTCCCATGTGCTGGTTCTTCCAGGGAACCAGCCCCTTaGAGACCAGTAGGAGGAAAGGTGGTGGAATTTGTC | + |
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Preference number: 3 (lower is better) Translates to: VPCAGSSREPAP*RPVGGKVVEFV Trigger: GACAAATTCCACCACCTTTCCTCCTACTGGTCTGCAAGGGGCTGGTTCCCTGGAAGAACCAGCACATGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR GCA 72 bp | CCGAATCCAACACCTCCATTCCACAGCTGTGCCTGTTaGCTAGGAAAAGCAGCAGTTCCCCTCCTGTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: PNPTPPFHSCAC*LGKAAVPLLSP Trigger: AGGAGACAGGAGGGGAACTGCTGCTTTTCCTAGGCAACAGGCACAGCTGTGGAATGGAGGTGTTGGATTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR GCA 72 bp | GTGAAGCCCGAATCCAACACCTCCATTCCACAGCTGTaGCTGTTGCCTAGGAAAAGCAGCAGTTCCCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: VKPESNTSIPQL*LLPRKSSSSPP Trigger: AGGAGGGGAACTGCTGCTTTTCCTAGGCAACAGGCACAGCTGTGGAATGGAGGTGTTGGATTCGGGCTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CCA 72 bp | GGTCAGTCAGACCATGGCACTGAAGAGCTGAGTCCTTaGTCCAGTGAAGCCCGAATCCAACACCTCCATTCC | + |
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Preference number: 3 (lower is better) Translates to: GQSDHGTEELSP*SSEARIQHLHS Trigger: GGAATGGAGGTGTTGGATTCGGGCTTCACTGGACCAAGGACTCAGCTCTTCAGTGCCATGGTCTGACTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CCA 72 bp | GTCCCTTTATTGATGTTGCCTAGGGTCTTGGGCCTTTaGGATGATCTGGCTGCGAGTCAGTACCCTTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: VPLLMLPRVLGL*DDLAASQYPWA Trigger: GGCCCAAGGGTACTGACTCGCAGCCAGATCATCCCAAAGGCCCAAGACCCTAGGCAACATCAATAAAGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR TCA 72 bp | GAAAAGCAGCAGTTCCCCTCCTGTCTCCTGGCCAGATaGTACAAGCAGGACCAATGTCCACTTGGCTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: EKQQFPSCLLAR*YKQDQCPLGSE Trigger: CTCAGAGCCAAGTGGACATTGGTCCTGCTTGTATCATCTGGCCAGGAGACAGGAGGGGAACTGCTGCTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CCA 72 bp | TATGGGAGCAGCAACATAGGGGTAGTGGTTCTGGGCTaGAGGCTTGGTAAGTTGGCAGGACTCAACTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: YGSSNIGVVVLG*RLGKLAGLNCQ Trigger: CTGACAGTTGAGTCCTGCCAACTTACCAAGCCTCCAGCCCAGAACCACTACCCCTATGTTGCTGCTCCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR CAA 90 bp | TATCCTACTTTGCCCAACCGTCACCACCCTGCTTGTCCTCTTTCTTGTAGTCCCTGGCTGCTGAGAGGTTaGACATGCAGAGCAGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: YPTLPNRHHPACPLSCSPWLLRG*TCRAGR Trigger: TCTCCCTGCTCTGCATGTCAAACCTCTCAGCAGCCA...GGGACTACAAGAAAGAGGACAAGCAGGGTGGTGACGGTTGGGCAAAGTAGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR CAA 90 bp | CCTGAAACAAGGAGGAGCAGGGCTGTTTATATCCTACTTTGCCCAACCGTCACCTGGGAACACCCAAGGTaGCTCATGTGGCAGCATAGC | + |
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Preference number: 3 (lower is better) Translates to: PETRRSRAVYILLCPTVTWEHPR*LMWQHS Trigger: GCTATGCTGCCACATGAGCAACCTTGGGTGTTCCCA...GGTGACGGTTGGGCAAAGTAGGATATAAACAGCCCTGCTCCTCCTTGTTTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CCA 72 bp | TTGCCTAGGAAAAGCAGCAGTTCCCCTCCTGTCTCCTaGCCAGATGATACAAGCAGGACCAATGTCCACTTG | + |
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Preference number: 3 (lower is better) Translates to: LPRKSSSSPPVS*PDDTSRTNVHL Trigger: CAAGTGGACATTGGTCCTGCTTGTATCATCTGGCCAGGAGACAGGAGGGGAACTGCTGCTTTTCCTAGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR CAA 90 bp | CCTGAAACAAGGAGGAGCAGGGCTGTTTATATCCTACTTTGCCCAACCGTCACCGAAAGGTGGTGGAATTaGTCCAGGAAGCTGTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: PETRRSRAVYILLCPTVTERWWN*SRKLWA Trigger: TGCCCACAGCTTCCTGGACAAATTCCACCACCTTTC...GGTGACGGTTGGGCAAAGTAGGATATAAACAGCCCTGCTCCTCCTTGTTTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR-3UTR CAA 90 bp | CCTGAAACAAGGAGGAGCAGGGCTGTTTATATCCTACTTTGCCCAACCGTCACCGTCCCTTTATTGATGTaGCCTAGGGTCTTGGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: PETRRSRAVYILLCPTVTVPLLM*PRVLGL Trigger: AAGGCCCAAGACCCTAGGCAACATCAATAAAGGGAC...GGTGACGGTTGGGCAAAGTAGGATATAAACAGCCCTGCTCCTCCTTGTTTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR GCA 72 bp | GAAACAAGGAGGAGCAGGGCTGTTTATATCCTACTTTaGCCAACCGTCACCACCCTGCTTGTCCTCTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: ETRRSRAVYILL*PTVTTLLVLFL Trigger: AAGAAAGAGGACAAGCAGGGTGGTGACGGTTGGGCAAAGTAGGATATAAACAGCCCTGCTCCTCCTTGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CCA 72 bp | TGGGGTTTGAAGGCCTGGATGCAAGAAGTGAATCCATaGGGAAGAATGAAGAATGGTCTCCCAGCTAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: WGLKAWMQEVNP*GRMKNGLPARK Trigger: CTTCCTAGCTGGGAGACCATTCTTCATTCTTCCCCATGGATTCACTTCTTGCATCCAGGCCTTCAAACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CCA 72 bp | AGTAATGCGTCTTGGGAACACCCAAGGTTGCTCATGTaGCAGCATAGCTCTTCTTGTCCCTTTATTGATGTT | + |
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Preference number: 3 (lower is better) Translates to: SNASWEHPRLLM*QHSSSCPFIDV Trigger: AACATCAATAAAGGGACAAGAAGAGCTATGCTGCCACATGAGCAACCTTGGGTGTTCCCAAGACGCATTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR GCA 90 bp | GGAAGTCCCATGTGCTGGTTCTTCCAGGGAACCAGCCCCTTGCAGACCAGTAGGGGGACAGGCATGGTGTaGAGCCCAGAGCAGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GSPMCWFFQGTSPLQTSRGTGMV*SPEQVR Trigger: CCTGACCTGCTCTGGGCTGCACACCATGCCTGTCCC...CCTACTGGTCTGCAAGGGGCTGGTTCCCTGGAAGAACCAGCACATGGGACTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR CCA 90 bp | CCTGAAACAAGGAGGAGCAGGGCTGTTTATATCCTACTTTGCCCAACCGTCACCAGCCCGAGCCGCTGCTaGCCGGCCGGTAGCCGGTTA | + |
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Preference number: 4 (lower is better) Translates to: PETRRSRAVYILLCPTVTSPSRC*PAGSRL Trigger: TAACCGGCTACCGGCCGGCCAGCAGCGGCTCGGGCT...GGTGACGGTTGGGCAAAGTAGGATATAAACAGCCCTGCTCCTCCTTGTTTCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR TCA 90 bp | GGAAGTCCCATGTGCTGGTTCTTCCAGGGAACCAGCCCCTTGCAGACCAGTAGGGGGCTCCAAGGGTGTTaGCAAGGCAGACTCCACACA | + |
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Preference number: 4 (lower is better) Translates to: GSPMCWFFQGTSPLQTSRGLQGC*QGRLHT Trigger: TGTGTGGAGTCTGCCTTGTCAACACCCTTGGAGCCC...CCTACTGGTCTGCAAGGGGCTGGTTCCCTGGAAGAACCAGCACATGGGACTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR CCA 90 bp | ACCAGCCCCTTGCAGACCAGTAGGAGGAAAGGTGGTGGAATTTGTCCAGGAAGCGGCACAACCCCAGCATaGAGCTGGAGGATGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSPLQTSRRKGGGICPGSGTTPA*SWRMEP Trigger: GGGCTCCATCCTCCAGCTCCATGCTGGGGTTGTGCC...GCTTCCTGGACAAATTCCACCACCTTTCCTCCTACTGGTCTGCAAGGGGCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR TCA 90 bp | CTCCTCTGCATCCTCACTGCAGGAATGACAGGAACAGCAAAATTCTGGCTGCTGCCAGAGTGCAGTGGATaGTGGGCAGGGCTCCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLCILTAGMTGTAKFWLLPECSG*WAGLQG Trigger: CCCTTGGAGCCCTGCCCATCATCCACTGCACTCTGG...CAGCAGCCAGAATTTTGCTGTTCCTGTCATTCCTGCAGTGAGGATGCAGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR TCA 90 bp | ACCAGCCCCTTGCAGACCAGTAGGAGGAAAGGTGGTGGAATTTGTCCAGGAAGCCACTCAGCAAGTGCATaGTCTGGTGGGAGTTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: TSPLQTSRRKGGGICPGSHSASA*SGGSCP Trigger: GGGGCAACTCCCACCAGATCATGCACTTGCTGAGTG...GCTTCCTGGACAAATTCCACCACCTTTCCTCCTACTGGTCTGCAAGGGGCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR GCA 90 bp | CCCACTCCTCTGCATCCTCACTGCAGGAATGACAGGAACAGCAAAATTCTGGCTGGCGAAGCCACGGTCTaGAGGCCAGAGTGCAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: PTPLHPHCRNDRNSKILAGEATV*RPECSG Trigger: TCCACTGCACTCTGGCCTGCAGACCGTGGCTTCGCC...AGCCAGAATTTTGCTGTTCCTGTCATTCCTGCAGTGAGGATGCAGAGGAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CAA 72 bp | CCCGAATCCAACACCTCCATTCCACAGCTGTGCCTGTaGCCTAGGAAAAGCAGCAGTTCCCCTCCTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PESNTSIPQLCL*PRKSSSSPPVS Trigger: GGAGACAGGAGGGGAACTGCTGCTTTTCCTAGGCAACAGGCACAGCTGTGGAATGGAGGTGTTGGATTCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR TCA 90 bp | GGAAGTCCCATGTGCTGGTTCTTCCAGGGAACCAGCCCCTTGCAGACCAGTAGGTTAATACGAACTTATTaGACTGCAGGTGCGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: GSPMCWFFQGTSPLQTSRLIRTY*TAGAAA Trigger: CGCCGCCGCACCTGCAGTTCAATAAGTTCGTATTAA...CCTACTGGTCTGCAAGGGGCTGGTTCCCTGGAAGAACCAGCACATGGGACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR GCA 90 bp | TATCCTACTTTGCCCAACCGTCACCACCCTGCTTGTCCTCTTTCTTGTAGTCCCCTAGCCAGCCATCCTTaGCCAGCTGACTCCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: YPTLPNRHHPACPLSCSPLASHP*PADSRA Trigger: TGCCCTGGAGTCAGCTGGGCAAGGATGGCTGGCTAG...GGGACTACAAGAAAGAGGACAAGCAGGGTGGTGACGGTTGGGCAAAGTAGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR GCA 90 bp | CCTGAAACAAGGAGGAGCAGGGCTGTTTATATCCTACTTTGCCCAACCGTCACCATACAGCACAGAGGCTaGAGGGGGCACCAGGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PETRRSRAVYILLCPTVTIQHRG*RGHQAS Trigger: GCTTGCCTGGTGCCCCCTGCAGCCTCTGTGCTGTAT...GGTGACGGTTGGGCAAAGTAGGATATAAACAGCCCTGCTCCTCCTTGTTTCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR GCA 90 bp | AGGAGGAAAGGTGGTGGAATTTGTCCAGGAAGCTGTGGGCAAGCCAGTTTGGCATCCAAGCAGAGCCAGTaGGTCCATGCGCAGGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRKGGGICPGSCGQASLASKQSQ*VHAQVA Trigger: TGCTACCTGCGCATGGACGCACTGGCTCTGCTTGGA...TGCCAAACTGGCTTGCCCACAGCTTCCTGGACAAATTCCACCACCTTTCCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR CCA 90 bp | CCTGAAACAAGGAGGAGCAGGGCTGTTTATATCCTACTTTGCCCAACCGTCACCCAGGCCAGAGTGCAGTaGATGATGGGCAGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PETRRSRAVYILLCPTVTQARVQ*MMGRAP Trigger: TGGAGCCCTGCCCATCATCCACTGCACTCTGGCCTG...GGTGACGGTTGGGCAAAGTAGGATATAAACAGCCCTGCTCCTCCTTGTTTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CAA 72 bp | TCCTGGCCAGATGATACAAGCAGGACCAATGTCCACTaGGCTCTGAGAGAAGCCTGGTCCCACTCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SWPDDTSRTNVH*ALREAWSHSSA Trigger: TGCAGAGGAGTGGGACCAGGCTTCTCTCAGAGCCAAGTGGACATTGGTCCTGCTTGTATCATCTGGCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR CCA 90 bp | AGGAGGGAAGATGGCAAGGAAAGTGGAAGCTGGGGTTTGAAGGCCTGGATGCAAGCTGACTCCAGGGCATaGTCATTGGCACCAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: RREDGKESGSWGLKAWMQADSRA*SLAPTP Trigger: TGGTGTTGGTGCCAATGACCATGCCCTGGAGTCAGC...TTGCATCCAGGCCTTCAAACCCCAGCTTCCACTTTCCTTGCCATCTTCCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CAA 72 bp | AGTCCCATGTGCTGGTTCTTCCAGGGAACCAGCCCCTaGCAGACCAGTAGGAGGAAAGGTGGTGGAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPMCWFFQGTSP*QTSRRKGGGIC Trigger: ACAAATTCCACCACCTTTCCTCCTACTGGTCTGCAAGGGGCTGGTTCCCTGGAAGAACCAGCACATGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR TCA 90 bp | AGGAGGAAAGGTGGTGGAATTTGTCCAGGAAGCTGTGGGCAAGCCAGTTTGGCACTCCTTGGTGGCACATaGAGAGGTGATACAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RRKGGGICPGSCGQASLALLGGT*RGDTAQ Trigger: CTGTGCTGTATCACCTCTTCATGTGCCACCAAGGAG...TGCCAAACTGGCTTGCCCACAGCTTCCTGGACAAATTCCACCACCTTTCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR GCA 90 bp | AGGAGGGAAGATGGCAAGGAAAGTGGAAGCTGGGGTTTGAAGGCCTGGATGCAACCCACACTCAGCAAGTaGATGATCTGGTGGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RREDGKESGSWGLKAWMQPTLSK*MIWWEL Trigger: CAACTCCCACCAGATCATGCACTTGCTGAGTGTGGG...TTGCATCCAGGCCTTCAAACCCCAGCTTCCACTTTCCTTGCCATCTTCCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR CCA 90 bp | CCTGAAACAAGGAGGAGCAGGGCTGTTTATATCCTACTTTGCCCAACCGTCACCCATGGAGCTGGAGGATaGAGCCCACACTCAGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PETRRSRAVYILLCPTVTHGAGG*SPHSAS Trigger: ACTTGCTGAGTGTGGGCTCCATCCTCCAGCTCCATG...GGTGACGGTTGGGCAAAGTAGGATATAAACAGCCCTGCTCCTCCTTGTTTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CAA 72 bp | ATAGGGGTAGTGGTTCTGGGCTGGAGGCTTGGTAAGTaGGCAGGACTCAACTGTCAGAGACTCTCACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IGVVVLGWRLGK*AGLNCQRLSQV Trigger: AACCTGTGAGAGTCTCTGACAGTTGAGTCCTGCCAACTTACCAAGCCTCCAGCCCAGAACCACTACCCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CAA 72 bp | CCAGCCAGCCTTGGTGCTTTTAAACCTCTGACCGTCTaGCCCACCTCTCCCCTGAAACTTCCGTGTCTAATA | + |
|
Preference number: 4 (lower is better) Translates to: PASLGAFKPLTV*PTSPLKLPCLI Trigger: TATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCAAGACGGTCAGAGGTTTAAAAGCACCAAGGCTGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR TCA 90 bp | GCTCTTCTTGTCCCTTTATTGATGTTGCCTAGGGTCTTGGGCCTTTGGGATGATCCATCCTTGCCCAGCTaGCTCCAGGGCATGGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: ALLVPLLMLPRVLGLWDDPSLPS*LQGMVI Trigger: AATGACCATGCCCTGGAGTCAGCTGGGCAAGGATGG...ATCATCCCAAAGGCCCAAGACCCTAGGCAACATCAATAAAGGGACAAGAAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR GCA 90 bp | TATCCTACTTTGCCCAACCGTCACCACCCTGCTTGTCCTCTTTCTTGTAGTCCCACGAACTTATTGAACTaGAGGTGCGGCGGCGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: YPTLPNRHHPACPLSCSPTNLLN*RCGGEL Trigger: TAGCTCGCCGCCGCACCTGCAGTTCAATAAGTTCGT...GGGACTACAAGAAAGAGGACAAGCAGGGTGGTGACGGTTGGGCAAAGTAGGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR GCA 90 bp | TCATGTGGCAGCATAGCTCTTCTTGTCCCTTTATTGATGTTGCCTAGGGTCTTGTTATTGAACTGCAGGTaGGGCGGCGAGCTAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCGSIALLVPLLMLPRVLLLNCR*GGELAQ Trigger: CTGGGCTAGCTCGCCGCCGCACCTGCAGTTCAATAA...CAAGACCCTAGGCAACATCAATAAAGGGACAAGAAGAGCTATGCTGCCACATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR GCA 90 bp | CTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCTCATGTGGCAGCATGTAGGTAGAAAAGGCTaGGCAGACAGCCCGAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LIKSNASWEHPRLLMWQHVGRKG*ADSPSR Trigger: GCGGCTCGGGCTGTCTGCGCAGCCTTTTCTACCTAC...ATGCTGCCACATGAGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR CCA 90 bp | CTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCTCATGACCCCAGCATGGAGCTaGAGGATGGAGCCCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: LPCLIKSNASWEHPRLLMTPAWS*RMEPTL Trigger: GAGTGTGGGCTCCATCCTCCAGCTCCATGCTGGGGT...CATGAGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAGACACGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CAA 72 bp | TGTGGCAGCATAGCTCTTCTTGTCCCTTTATTGATGTaGCCTAGGGTCTTGGGCCTTTGGGATGATCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CGSIALLVPLLM*PRVLGLWDDLA Trigger: AGCCAGATCATCCCAAAGGCCCAAGACCCTAGGCAACATCAATAAAGGGACAAGAAGAGCTATGCTGCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR GCA 90 bp | CTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTTGCTCATGTGGCAGCATCGTGTGTGTAGATGTTaGCCAGCTCGTTGTGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LIKSNASWEHPRLLMWQHRVCRC*PARCVG Trigger: ACCTACACAACGAGCTGGGCAACATCTACACACACG...ATGCTGCCACATGAGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| 3UTR CAA 72 bp | CTAATAAAAAGTAATGCGTCTTGGGAACACCCAAGGTaGCTCATGTGGCAGCATAGCTCTTCTTGTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIKSNASWEHPR*LMWQHSSSCPF Trigger: AAAGGGACAAGAAGAGCTATGCTGCCACATGAGCAACCTTGGGTGTTCCCAAGACGCATTACTTTTTATTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS GCA 90 bp | GGCGTGCCACATTCACCAGCCCTCCAAGCAGAGCCAGTGCGTCCATaGGCAGGTAGCAGGGCAGAGAGCCTGGAGCCCCTGAGCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GVPHSPALQAEPVRP*AGSRAESLEPLSPA Trigger: GGCTGGGCTCAGGGGCTCCAGGCTCTCTGCCCTGCTACCTGCGCATGGACGCACTGGCTCTGCTTGGAGGGCTGGTGAATGTGGCACGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS GCA 90 bp | GCCCCAGTAGTCGAAGCGACCAGGCCCCCACCGCTCTGGCAGGCGTaGCACATTCACCAGCCCTCCAAGCAGAGCCAGTGCGTCCATGCG | + |
|
Preference number: 5 (lower is better) Translates to: APVVEATRPPPLWQA*HIHQPSKQSQCVHA Trigger: CGCATGGACGCACTGGCTCTGCTTGGAGGGCTGGTGAATGTGGCACGCCTGCCAGAGCGGTGGGGGCCTGGTCGCTTCGACTACTGGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS TCA 90 bp | GGCACTGGTGGAGGGGGCAGTGAGAGCTCTCCAGCCGGCTACACCTaGCAGTGCAGTGTAACCCATCAGGGCAGCTGGGCGAAGCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: GTGGGGSESSPAGYT*QCSVTHQGSWAKPR Trigger: CCGTGGCTTCGCCCAGCTGCCCTGATGGGTTACACTGCACTGTCAGGTGTAGCCGGCTGGAGAGCTCTCACTGCCCCCTCCACCAGTGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS TCA 90 bp | CCCCAGCATGGAGCTGGAGGATGGAGCCCACACTCAGCAAGTGCATaGTCTGGTGGGAGTTGCCCCAGTAGTCGAAGCGACCAGGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PQHGAGGWSPHSASA*SGGSCPSSRSDQAP Trigger: GGGGGCCTGGTCGCTTCGACTACTGGGGCAACTCCCACCAGATCATGCACTTGCTGAGTGTGGGCTCCATCCTCCAGCTCCATGCTGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS TCA 90 bp | CAAGCCACACAGTGTGTACCTCCTAGCCAGCCATCCTTGCCCAGCTaGCTCCAGGGCATGGTCATTGGCACCAACACCAGGAAGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QATQCVPPSQPSLPS*LQGMVIGTNTRKPS Trigger: GCTGGGCTTCCTGGTGTTGGTGCCAATGACCATGCCCTGGAGTCAGCTGGGCAAGGATGGCTGGCTAGGAGGTACACACTGTGTGGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS GCA 90 bp | GCACCAGGCAAGCCACACAGTGTGTACCTCCTAGCCAGCCATCCTTaGCCAGCTGACTCCAGGGCATGGTCATTGGCACCAACACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: APGKPHSVYLLASHP*PADSRAWSLAPTPG Trigger: TCCTGGTGTTGGTGCCAATGACCATGCCCTGGAGTCAGCTGGGCAAGGATGGCTGGCTAGGAGGTACACACTGTGTGGCTTGCCTGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR CAA 90 bp | ACCAGCCCCTTGCAGACCAGTAGGAGGAAAGGTGGTGGAATTTGTCCAGGAAGCCAGGCGGGCCCCAGCTaGCCAACCAAAGGCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSPLQTSRRKGGGICPGSQAGPS*PTKGSK Trigger: CTTCGAGCCTTTGGTTGGCAAGCTGGGGCCCGCCTG...GCTTCCTGGACAAATTCCACCACCTTTCCTCCTACTGGTCTGCAAGGGGCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR CAA 90 bp | CCTGAAACAAGGAGGAGCAGGGCTGTTTATATCCTACTTTGCCCAACCGTCACCTCCAGGGCATGGTCATaGGCACCAACACCAGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PETRRSRAVYILLCPTVTSRAWS*APTPGS Trigger: GCTTCCTGGTGTTGGTGCCAATGACCATGCCCTGGA...GGTGACGGTTGGGCAAAGTAGGATATAAACAGCCCTGCTCCTCCTTGTTTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR CAA 90 bp | TCATGTGGCAGCATAGCTCTTCTTGTCCCTTTATTGATGTTGCCTAGGGTCTTGAGGGCTCCAAGGGTGTaGACAAGGCAGACTCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: SCGSIALLVPLLMLPRVLRAPRV*TRQTPH Trigger: GTGTGGAGTCTGCCTTGTCAACACCCTTGGAGCCCT...CAAGACCCTAGGCAACATCAATAAAGGGACAAGAAGAGCTATGCTGCCACATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS-3UTR CAA 90 bp | TCATGTGGCAGCATAGCTCTTCTTGTCCCTTTATTGATGTTGCCTAGGGTCTTGGTTAATACGAACTTATaGAACTGCAGGTGCGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SCGSIALLVPLLMLPRVLVNTNL*NCRCGG Trigger: GCCGCCGCACCTGCAGTTCAATAAGTTCGTATTAAC...CAAGACCCTAGGCAACATCAATAAAGGGACAAGAAGAGCTATGCTGCCACATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS GCA 72 bp | CCACGGGCCCCAAACACCAGCAGGCGGGCCCCAGCTTaGCAACCAAAGGCTCGAAGCCGGGCACTGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PRAPNTSRRAPA*QPKARSRALVE Trigger: CTCCACCAGTGCCCGGCTTCGAGCCTTTGGTTGGCAAGCTGGGGCCCGCCTGCTGGTGTTTGGGGCCCGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS TCA 72 bp | CAGTGTGTACCTCCTAGCCAGCCATCCTTGCCCAGCTaGCTCCAGGGCATGGTCATTGGCACCAACACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QCVPPSQPSLPS*LQGMVIGTNTR Trigger: CCTGGTGTTGGTGCCAATGACCATGCCCTGGAGTCAGCTGGGCAAGGATGGCTGGCTAGGAGGTACACACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS GCA 72 bp | GTAGGTAGAAAAGGCTGCGCAGACAGCCCGAGCCGCTaGTGGCCGGCCGGTAGCCGGTTAATACGAACTTAT | + |
|
Preference number: 6 (lower is better) Translates to: VGRKGCADSPSR*WPAGSRLIRTY Trigger: ATAAGTTCGTATTAACCGGCTACCGGCCGGCCAGCAGCGGCTCGGGCTGTCTGCGCAGCCTTTTCTACCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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| CDS CAA 72 bp | CAAGGCAAGGAGCCGGGTGTACACAGGACTGCCTCCTaGGTGGCACATGAAGAGGTGATACAGCACAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QGKEPGVHRTAS*VAHEEVIQHRG Trigger: GCCTCTGTGCTGTATCACCTCTTCATGTGCCACCAAGGAGGCAGTCCTGTGTACACCCGGCTCCTTGCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024702.5 |
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