Pregenerated sensors for PAQR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055725Ensembl transcript IDs: ENSMUST00000069453.9, ENSMUST00000112968.2, ENSMUST00000112969.10, ENSMUST00000196078.5
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAGACCAAGAGAGGAGACACGAGCTCCCTGCGCAGGGACAAACCTaGCGTGGCCCCAGACACAGCCCTCCTGACCCCGGCCCGCTCGCC | + |
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Preference number: 1 (lower is better) Translates to: KDQERRHELPAQGQT*RGPRHSPPDPGPLA Trigger: GGCGAGCGGGCCGGGGTCAGGAGGGCTGTGTCTGGGGCCACGCCAGGTTTGTCCCTGCGCAGGGAGCTCGTGTCTCCTCTCTTGGTCTTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR CCA 90 bp | TGCTCACCAACCCACCTACTTCCTGGCCCTGGCATTCCCCTACACTaGGGCATCAAGCCTTCACAGGACCAAGGGTCTCTCCTTCCACTG | + |
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Preference number: 1 (lower is better) Translates to: CSPTHLLPGPGIPLH*GIKPSQDQGSLLPL Trigger: CAGTGGAAGGAGAGACCCTTGGTCCTGTGAAGGCTTGATGCCCCAGTGTAGGGGAATGCCAGGGCCAGGAAGTAGGTGGGTTGGTGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR TCA 90 bp | AGACTTGTGGCACCAGCCCCATCAGGGCCTAAGCGACATCTGCGTTaGTCACACCACCATTTTGCCTGGGAGGCCGCGACAGAATTCAGT | + |
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Preference number: 1 (lower is better) Translates to: RLVAPAPSGPKRHLR*SHHHFAWEAATEFS Trigger: ACTGAATTCTGTCGCGGCCTCCCAGGCAAAATGGTGGTGTGATCAACGCAGATGTCGCTTAGGCCCTGATGGGGCTGGTGCCACAAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR TCA 90 bp | TGCTCCTGGGACAGAGGCATAGTGTGGGTTCAGGACAAGGTGCAGTaGGAGAGGAGCCAAAAATCAAAGTGTGCAGCACTTGGGCGGGGC | + |
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Preference number: 1 (lower is better) Translates to: CSWDRGIVWVQDKVQ*ERSQKSKCAALGRG Trigger: GCCCCGCCCAAGTGCTGCACACTTTGATTTTTGGCTCCTCTCTCACTGCACCTTGTCCTGAACCCACACTATGCCTCTGTCCCAGGAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR CCA 90 bp | CAGGGAGGGAAGCTGGAGCAGGACACACGGACATACTCTGCTCATTaGGGAAGAATGACAACTCCGAGCAGATGTGCTGCTCCTGGGACA | + |
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Preference number: 1 (lower is better) Translates to: QGGKLEQDTRTYSAH*GRMTTPSRCAAPGT Trigger: TGTCCCAGGAGCAGCACATCTGCTCGGAGTTGTCATTCTTCCCCAATGAGCAGAGTATGTCCGTGTGTCCTGCTCCAGCTTCCCTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR TCA 90 bp | AGCTGGAGCAGGACACACGGACATACTCTGCTCATTGGGGAAGAATaGCAACTCCGAGCAGATGTGCTGCTCCTGGGACAGAGGCATAGT | + |
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Preference number: 1 (lower is better) Translates to: SWSRTHGHTLLIGEE*QLRADVLLLGQRHS Trigger: ACTATGCCTCTGTCCCAGGAGCAGCACATCTGCTCGGAGTTGTCATTCTTCCCCAATGAGCAGAGTATGTCCGTGTGTCCTGCTCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR GCA 90 bp | ATACTCTGCTCATTGGGGAAGAATGACAACTCCGAGCAGATGTGCTaGTCCTGGGACAGAGGCATAGTGTGGGTTCAGGACAAGGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: ILCSLGKNDNSEQMC*SWDRGIVWVQDKVQ Trigger: CTGCACCTTGTCCTGAACCCACACTATGCCTCTGTCCCAGGAGCAGCACATCTGCTCGGAGTTGTCATTCTTCCCCAATGAGCAGAGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR TCA 90 bp | TCTCTAACTCCTGCATTGAGGACCTTGTGCTCCAATGGTTGGCTGTaGGCATCCACTTCTGTATTTGTCAGGCTCTGGCAGAGCCTCTCA | + |
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Preference number: 1 (lower is better) Translates to: SLTPALRTLCSNGWL*ASTSVFVRLWQSLS Trigger: TGAGAGGCTCTGCCAGAGCCTGACAAATACAGAAGTGGATGCTCACAGCCAACCATTGGAGCACAAGGTCCTCAATGCAGGAGTTAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGCCCCAGACACAGCCCTCCTGACCCCGGCCCGCTCGCCTGCTGATGCGCTGCGCTGTTCCCTTCTTTaGAGCGCCTGCTCCGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: VAPDTALLTPARSPADALRCSLL*SACSAE Trigger: CTCTGCGGAGCAGGCGCTGCAAAGAAGGGAACAGCG...CAGCGCATCAGCAGGCGAGCGGGCCGGGGTCAGGAGGGCTGTGTCTGGGGCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR-3UTR CCA 90 bp | CGCACGCCCGAGAGGGCCCGCAGACACAAGAAGGTGGGCCGCAGAGACTCCCAGCATCCTCCAGACTTGTaGCACCAGCCCCATCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: RTPERARRHKKVGRRDSQHPPDL*HQPHQG Trigger: GCCCTGATGGGGCTGGTGCCACAAGTCTGGAGGATG...CTGGGAGTCTCTGCGGCCCACCTTCTTGTGTCTGCGGGCCCTCTCGGGCGTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR-3UTR TCA 90 bp | GTGGCCCCAGACACAGCCCTCCTGACCCCGGCCCGCTCGCCTGCTGATGCGCTGTGGGCTCGTGCCCTTTaGGGAAATAACTGGGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: VAPDTALLTPARSPADALWARAL*GNNWES Trigger: TGACTCCCAGTTATTTCCTCAAAGGGCACGAGCCCA...CAGCGCATCAGCAGGCGAGCGGGCCGGGGTCAGGAGGGCTGTGTCTGGGGCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR-3UTR CCA 90 bp | CGCACGCCCGAGAGGGCCCGCAGACACAAGAAGGTGGGCCGCAGAGACTCCCAGCTGACGAGAGTCTGCTaGACCCATTCGGTGCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: RTPERARRHKKVGRRDSQLTRVC*THSVPS Trigger: GCTTGGCACCGAATGGGTCCAGCAGACTCTCGTCAG...CTGGGAGTCTCTGCGGCCCACCTTCTTGTGTCTGCGGGCCCTCTCGGGCGTGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR-3UTR TCA 90 bp | CGCACGCCCGAGAGGGCCCGCAGACACAAGAAGGTGGGCCGCAGAGACTCCCAGACAGCGCAGAGACATTaGGAATGGATGACTTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: RTPERARRHKKVGRRDSQTAQRH*EWMTLV Trigger: CACCAAAGTCATCCATTCTCAATGTCTCTGCGCTGT...CTGGGAGTCTCTGCGGCCCACCTTCTTGTGTCTGCGGGCCCTCTCGGGCGTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR-3UTR TCA 90 bp | GAGAGGAGACACGAGCTCCCTGCGCAGGGACAAACCTGGCGTGGCCCCAGACACGACATTGAGAATGGATaGCTTTGGTGCCGTGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: ERRHELPAQGQTWRGPRHDIENG*LWCRAL Trigger: AAGGGCACGGCACCAAAGTCATCCATTCTCAATGTC...GTGTCTGGGGCCACGCCAGGTTTGTCCCTGCGCAGGGAGCTCGTGTCTCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR-3UTR TCA 90 bp | GAGAGGAGACACGAGCTCCCTGCGCAGGGACAAACCTGGCGTGGCCCCAGACACCTCCCAGAGCAGCAATaGGTTTTTAACCATTTCCGA | + |
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Preference number: 2 (lower is better) Translates to: ERRHELPAQGQTWRGPRHLPEQQ*VFNHFR Trigger: TCGGAAATGGTTAAAAACTCATTGCTGCTCTGGGAG...GTGTCTGGGGCCACGCCAGGTTTGTCCCTGCGCAGGGAGCTCGTGTCTCCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR-3UTR CCA 90 bp | CAACTCCGAGCAGATGTGCTGCTCCTGGGACAGAGGCATAGTGTGGGTTCAGGAAAAGTGTGCAGCACTTaGGCGGGGCTGGCAGACACT | + |
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Preference number: 2 (lower is better) Translates to: QLRADVLLLGQRHSVGSGKVCST*AGLADT Trigger: AGTGTCTGCCAGCCCCGCCCAAGTGCTGCACACTTT...TCCTGAACCCACACTATGCCTCTGTCCCAGGAGCAGCACATCTGCTCGGAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGAGTGTGAACAGGCAAAGACCAAGAGAGGAGACACGAGCTCCCTGCGCAGGATCACACCACCATTTTaGCTGGGAGGCCGCGACAGA | + |
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Preference number: 2 (lower is better) Translates to: SECEQAKTKRGDTSSLRRITPPF*LGGRDR Trigger: TCTGTCGCGGCCTCCCAGGCAAAATGGTGGTGTGAT...CCTGCGCAGGGAGCTCGTGTCTCCTCTCTTGGTCTTTGCCTGTTCACACTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR-3UTR CCA 90 bp | GTCGGGCAGTTACTGGATGGCCTTTCCTTCAGTCTCTGTATCTCCTCCCATGGGCAGATGTGCTGCTCCTaGGACAGAGGCATAGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: VGQLLDGLSFSLCISSHGQMCCS*DRGIVW Trigger: CCACACTATGCCTCTGTCCCAGGAGCAGCACATCTG...CCCATGGGAGGAGATACAGAGACTGAAGGAAAGGCCATCCAGTAACTGCCCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR-3UTR GCA 90 bp | GTCGGGCAGTTACTGGATGGCCTTTCCTTCAGTCTCTGTATCTCCTCCCATGGGGGGTTCAGGACAAGGTaGAGTGAGAGAGGAGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: VGQLLDGLSFSLCISSHGGFRTR*SERGAK Trigger: TTTGGCTCCTCTCTCACTGCACCTTGTCCTGAACCC...CCCATGGGAGGAGATACAGAGACTGAAGGAAAGGCCATCCAGTAACTGCCCGAC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGAGCCTCTCAGGAGACAGCTATATCAGACTCCTGTCAGCAAGCACCTGTTCCAAAAATCAAAGTGTaGAGCACTTGGGCGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GRASQETAISDSCQQAPVPKIKV*STWAGL Trigger: CAGCCCCGCCCAAGTGCTGCACACTTTGATTTTTGG...AACAGGTGCTTGCTGACAGGAGTCTGATATAGCTGTCTCCTGAGAGGCTCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTCTCTGTATCTCCTCCCATGGGAGCTCCAACAGTGAGAGGTACCAAACTCACAGGGAGGGAAGCTaGAGCAGGACACACGGACAT | + |
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Preference number: 2 (lower is better) Translates to: FSLCISSHGSSNSERYQTHREGS*SRTHGH Trigger: ATGTCCGTGTGTCCTGCTCCAGCTTCCCTCCCTGTG...AGTTTGGTACCTCTCACTGTTGGAGCTCCCATGGGAGGAGATACAGAGACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAGCCTCTCAGGAGACAGCTATATCAGACTCCTGTCAGCAAGCACCTGTTAGGTCGGGCAGTTACTaGATGGCCTTTCCTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: GRASQETAISDSCQQAPVRSGSY*MAFPSV Trigger: GACTGAAGGAAAGGCCATCCAGTAACTGCCCGACCT...AACAGGTGCTTGCTGACAGGAGTCTGATATAGCTGTCTCCTGAGAGGCTCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR CAA 90 bp | GGACCTTGTGCTCCAATGGTTGGCTGTGAGCATCCACTTCTGTATTaGTCAGGCTCTGGCAGAGCCTCTCAGGAGACAGCTATATCAGAC | + |
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Preference number: 2 (lower is better) Translates to: GPCAPMVGCEHPLLY*SGSGRASQETAISD Trigger: GTCTGATATAGCTGTCTCCTGAGAGGCTCTGCCAGAGCCTGACAAATACAGAAGTGGATGCTCACAGCCAACCATTGGAGCACAAGGTCC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCCCAGGTCGGGCAGTTACTGGATGGCCTTTCCTTCAGTCTCTGTATCTCCTCTCATTGGGGAAGAATaGCAACTCCGAGCAGATGTG | + |
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Preference number: 2 (lower is better) Translates to: MPRSGSYWMAFPSVSVSPLIGEE*QLRADV Trigger: CACATCTGCTCGGAGTTGTCATTCTTCCCCAATGAG...AGGAGATACAGAGACTGAAGGAAAGGCCATCCAGTAACTGCCCGACCTGGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR CAA 90 bp | CCTCTCAGGAGACAGCTATATCAGACTCCTGTCAGCAAGCACCTGTaGGCATCCACAATAGTGTCTGGGTTTGGGGTCTGTATATGGGAT | + |
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Preference number: 2 (lower is better) Translates to: PLRRQLYQTPVSKHL*ASTIVSGFGVCIWD Trigger: ATCCCATATACAGACCCCAAACCCAGACACTATTGTGGATGCCAACAGGTGCTTGCTGACAGGAGTCTGATATAGCTGTCTCCTGAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTATTTGTCAGGCTCTGGCAGAGCCTCTCAGGAGACAGCTATATCAGACTGACAGAGGCATAGTGTaGGTTCAGGACAAGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: FCICQALAEPLRRQLYQTDRGIV*VQDKVQ Trigger: CTGCACCTTGTCCTGAACCCACACTATGCCTCTGTC...AGTCTGATATAGCTGTCTCCTGAGAGGCTCTGCCAGAGCCTGACAAATACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGACAGCTATATCAGACTCCTGTCAGCAAGCACCTGTTGGCATCCACAATATGTGCCTCTCTGTCCTaGGTTACACAATTACAGACA | + |
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Preference number: 2 (lower is better) Translates to: RRQLYQTPVSKHLLASTICASLS*VTQLQT Trigger: TGTCTGTAATTGTGTAACTCAGGACAGAGAGGCACA...TATTGTGGATGCCAACAGGTGCTTGCTGACAGGAGTCTGATATAGCTGTCTCCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR-3UTR GCA 90 bp | CGCAGAGACTCCCAGAGCAGCAATGAGTTTTTAACCATTTCCGATTCCAAGGAGTTACAGAACTCGTGGTaGAAAGTGTCACTCCACAAC | + |
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Preference number: 2 (lower is better) Translates to: RRDSQSSNEFLTISDSKELQNSW*KVSLHN Trigger: GTTGTGGAGTGACACTTTGCACCACGAGTTCTGTAA...CTCCTTGGAATCGGAAATGGTTAAAAACTCATTGCTGCTCTGGGAGTCTCTGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR-3UTR GCA 90 bp | ATGCCCAGGTCGGGCAGTTACTGGATGGCCTTTCCTTCAGTCTCTGTATCTCCTATAGATTTAAACCAGTaGAAGAAGCCCCAAATCCTA | + |
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Preference number: 2 (lower is better) Translates to: MPRSGSYWMAFPSVSVSPIDLNQ*KKPQIL Trigger: TAGGATTTGGGGCTTCTTGCACTGGTTTAAATCTAT...AGGAGATACAGAGACTGAAGGAAAGGCCATCCAGTAACTGCCCGACCTGGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR-3UTR CCA 90 bp | AAGATTTATTTTTATTGTTGGTGTACGGGTGTTTTGGCTACATGTATGTCTGCAGAGTCGCTGTCATCCTaGAGGGGTGTTTTTCTTAGC | + |
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Preference number: 2 (lower is better) Translates to: KIYFYCWCTGVLATCMSAESLSS*RGVFLS Trigger: GCTAAGAAAAACACCCCTCCAGGATGACAGCGACTC...TGCAGACATACATGTAGCCAAAACACCCGTACACCAACAATAAAAATAAATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
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| 3UTR-3UTR CCA 90 bp | AAGATTTATTTTTATTGTTGGTGTACGGGTGTTTTGGCTACATGTATGTCTGCACCCCAGGTGTTCCCTTaGTGCTTTCTTAACAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: KIYFYCWCTGVLATCMSAPQVFP*CFLNKA Trigger: TGCCTTGTTAAGAAAGCACCAAGGGAACACCTGGGG...TGCAGACATACATGTAGCCAAAACACCCGTACACCAACAATAAAAATAAATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
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| 3UTR GCA 72 bp | GGTCAGCGTACAGGACTGGCCCGCGGTGGGGCCAGATaGCCGGCCTCTGCCTGCACGGCCCAGAAGTGTAGA | + |
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Preference number: 3 (lower is better) Translates to: GQRTGLARGGAR*PASACTAQKCR Trigger: TCTACACTTCTGGGCCGTGCAGGCAGAGGCCGGGCATCTGGCCCCACCGCGGGCCAGTCCTGTACGCTGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR CCA 72 bp | GAGAGGAGACACGAGCTCCCTGCGCAGGGACAAACCTaGCGTGGCCCCAGACACAGCCCTCCTGACCCCGGC | + |
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Preference number: 3 (lower is better) Translates to: ERRHELPAQGQT*RGPRHSPPDPG Trigger: GCCGGGGTCAGGAGGGCTGTGTCTGGGGCCACGCCAGGTTTGTCCCTGCGCAGGGAGCTCGTGTCTCCTCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR CCA 72 bp | TCAACAAGAAGGTCAGCGTACAGGACTGGCCCGCGGTaGGGCCAGATGCCCGGCCTCTGCCTGCACGGCCCA | + |
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Preference number: 3 (lower is better) Translates to: STRRSAYRTGPR*GQMPGLCLHGP Trigger: TGGGCCGTGCAGGCAGAGGCCGGGCATCTGGCCCCACCGCGGGCCAGTCCTGTACGCTGACCTTCTTGTTGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR-3UTR CAA 90 bp | GTGGCCCCAGACACAGCCCTCCTGACCCCGGCCCGCTCGCCTGCTGATGCGCTGAGGAGTTCGATGTGTTaGGCGCTGTTCCCTTCTTTG | + |
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Preference number: 3 (lower is better) Translates to: VAPDTALLTPARSPADALRSSMC*ALFPSL Trigger: CAAAGAAGGGAACAGCGCCAAACACATCGAACTCCT...CAGCGCATCAGCAGGCGAGCGGGCCGGGGTCAGGAGGGCTGTGTCTGGGGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR TCA 72 bp | AGACACAGCCCTCCTGACCCCGGCCCGCTCGCCTGCTaGTGCGCTGACTCCCAGTCAGGAGTTCGATGTGTT | + |
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Preference number: 3 (lower is better) Translates to: RHSPPDPGPLAC*CADSQSGVRCV Trigger: AACACATCGAACTCCTGACTGGGAGTCAGCGCATCAGCAGGCGAGCGGGCCGGGGTCAGGAGGGCTGTGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR TCA 72 bp | GCACCAGCCCCATCAGGGCCTAAGCGACATCTGCGTTaGTCACACCACCATTTTGCCTGGGAGGCCGCGACA | + |
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Preference number: 3 (lower is better) Translates to: APAPSGPKRHLR*SHHHFAWEAAT Trigger: TGTCGCGGCCTCCCAGGCAAAATGGTGGTGTGATCAACGCAGATGTCGCTTAGGCCCTGATGGGGCTGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR GCA 72 bp | AACAGGCAAAGACCAAGAGAGGAGACACGAGCTCCCTaGGCAGGGACAAACCTGGCGTGGCCCCAGACACAG | + |
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Preference number: 3 (lower is better) Translates to: NRQRPREETRAP*AGTNLAWPQTQ Trigger: CTGTGTCTGGGGCCACGCCAGGTTTGTCCCTGCGCAGGGAGCTCGTGTCTCCTCTCTTGGTCTTTGCCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR CCA 72 bp | AGCGCCTGCTCCGCAGAGCCTGCAGCACAGAGGGGATaGGAAGAACCTGTCCCAGCATGCTTTTCCAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: SACSAEPAAQRG*EEPVPACFSRA Trigger: TGCTCTGGAAAAGCATGCTGGGACAGGTTCTTCCCATCCCCTCTGTGCTGCAGGCTCTGCGGAGCAGGCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR CCA 72 bp | TGGGCTGCAGTGGACGCACTGCACAGGGAGGGAAGCTaGAGCAGGACACACGGACATACTCTGCTCATTGGG | + |
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Preference number: 3 (lower is better) Translates to: WAAVDALHREGS*SRTHGHTLLIG Trigger: CCCAATGAGCAGAGTATGTCCGTGTGTCCTGCTCCAGCTTCCCTCCCTGTGCAGTGCGTCCACTGCAGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR GCA 72 bp | TTGTGGCACCAGCCCCATCAGGGCCTAAGCGACATCTaGGTTGATCACACCACCATTTTGCCTGGGAGGCCG | + |
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Preference number: 3 (lower is better) Translates to: LWHQPHQGLSDI*VDHTTILPGRP Trigger: CGGCCTCCCAGGCAAAATGGTGGTGTGATCAACGCAGATGTCGCTTAGGCCCTGATGGGGCTGGTGCCACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR-3UTR CAA 90 bp | GGCAGAGCCTCTCAGGAGACAGCTATATCAGACTCCTGTCAGCAAGCACCTGTTAACCTGGCCTGGGAGTaGAGGACCTGTGCCTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: GRASQETAISDSCQQAPVNLAWE*RTCASL Trigger: CAGAGAGGCACAGGTCCTCAACTCCCAGGCCAGGTT...AACAGGTGCTTGCTGACAGGAGTCTGATATAGCTGTCTCCTGAGAGGCTCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR GCA 72 bp | GCAGCACAGAGGGGATGGGAAGAACCTGTCCCAGCATaGTTTTCCAGAGCAGGAGGACTTCGACGTGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: AAQRGWEEPVPA*FSRAGGLRRVH Trigger: GTGAACACGTCGAAGTCCTCCTGCTCTGGAAAAGCATGCTGGGACAGGTTCTTCCCATCCCCTCTGTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
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| 3UTR GCA 72 bp | TCATTGGGGAAGAATGACAACTCCGAGCAGATGTGCTaGTCCTGGGACAGAGGCATAGTGTGGGTTCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: SLGKNDNSEQMC*SWDRGIVWVQD Trigger: GTCCTGAACCCACACTATGCCTCTGTCCCAGGAGCAGCACATCTGCTCGGAGTTGTCATTCTTCCCCAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR CCA 72 bp | ATATGGGATGGATGCCCAGGTCGGGCAGTTACTGGATaGCCTTTCCTTCAGTCTCTGTATCTCCTCCCATGG | + |
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Preference number: 3 (lower is better) Translates to: IWDGCPGRAVTG*PFLQSLYLLPW Trigger: CCATGGGAGGAGATACAGAGACTGAAGGAAAGGCCATCCAGTAACTGCCCGACCTGGGCATCCATCCCATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR TCA 72 bp | CCTGCATTGAGGACCTTGTGCTCCAATGGTTGGCTGTaGGCATCCACTTCTGTATTTGTCAGGCTCTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: PALRTLCSNGWL*ASTSVFVRLWQ Trigger: CTGCCAGAGCCTGACAAATACAGAAGTGGATGCTCACAGCCAACCATTGGAGCACAAGGTCCTCAATGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR TCA 72 bp | CTAGGCCATCCTCTGCTACATAAGCGGCTGGAGCCATaGGTGCCGCCTTGTGTTTTCTTTGGTTGGTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: LGHPLLHKRLEP*VPPCVFFGWWF Trigger: AAACCACCAACCAAAGAAAACACAAGGCGGCACTCATGGCTCCAGCCGCTTATGTAGCAGAGGATGGCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR CCA 72 bp | AGCCAAAAATCAAAGTGTGCAGCACTTGGGCGGGGCTaGCAGACACTCTCTTTCACTGTTTGGAGACAGGGA | + |
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Preference number: 3 (lower is better) Translates to: SQKSKCAALGRG*QTLSFTVWRQG Trigger: TCCCTGTCTCCAAACAGTGAAAGAGAGTGTCTGCCAGCCCCGCCCAAGTGCTGCACACTTTGATTTTTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
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| 3UTR CCA 72 bp | GTGAGAGAGGAGCCAAAAATCAAAGTGTGCAGCACTTaGGCGGGGCTGGCAGACACTCTCTTTCACTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: VREEPKIKVCST*AGLADTLFHCL Trigger: CAAACAGTGAAAGAGAGTGTCTGCCAGCCCCGCCCAAGTGCTGCACACTTTGATTTTTGGCTCCTCTCTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| 3UTR CCA 72 bp | AAGCTGGAGCAGGACACACGGACATACTCTGCTCATTaGGGAAGAATGACAACTCCGAGCAGATGTGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KLEQDTRTYSAH*GRMTTPSRCAA Trigger: AGCAGCACATCTGCTCGGAGTTGTCATTCTTCCCCAATGAGCAGAGTATGTCCGTGTGTCCTGCTCCAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCGGGCAGTTACTGGATGGCCTTTCCTTCAGTCTCTGTATCTCCTCCCATGGGACTCTCTTTCACTGTTaGGAGACAGGGATTTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VGQLLDGLSFSLCISSHGTLFHC*ETGICP Trigger: AGGACAAATCCCTGTCTCCAAACAGTGAAAGAGAGT...CCCATGGGAGGAGATACAGAGACTGAAGGAAAGGCCATCCAGTAACTGCCCGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| 3UTR TCA 72 bp | CTGGCCTGGGAGTTGAGGACCTGTGCCTCTCTGTCCTaGGTTACACAATTACAGACATACGCTGTTATGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LAWELRTCASLS*VTQLQTYAVMV Trigger: GACCATAACAGCGTATGTCTGTAATTGTGTAACTCAGGACAGAGAGGCACAGGTCCTCAACTCCCAGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| 3UTR CCA 72 bp | TCCAACAGTGAGAGGTACCAAACTAGTTTTATAAACTaGGCTGCAGTGGACGCACTGCACAGGGAGGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SNSERYQTSFIN*AAVDALHREGS Trigger: GCTTCCCTCCCTGTGCAGTGCGTCCACTGCAGCCCAGTTTATAAAACTAGTTTGGTACCTCTCACTGTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| 3UTR TCA 72 bp | AGGGATTTGTCCTATAGCTTAACCTGGCCTGGGAGTTaGGGACCTGTGCCTCTCTGTCCTGAGTTACACAAT | + |
|
Preference number: 3 (lower is better) Translates to: RDLSYSLTWPGS*GPVPLCPELHN Trigger: ATTGTGTAACTCAGGACAGAGAGGCACAGGTCCTCAACTCCCAGGCCAGGTTAAGCTATAGGACAAATCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAGGTGGGCCGCAGAGACTCCCAGAGCAGCAATGAGTTTTTAACCATTTCCCACAGCGCAGAGACATaGAGAATGGATGACTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: KKVGRRDSQSSNEFLTISHSAET*RMDDFG Trigger: ACCAAAGTCATCCATTCTCAATGTCTCTGCGCTGTG...GGAAATGGTTAAAAACTCATTGCTGCTCTGGGAGTCTCTGCGGCCCACCTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| 3UTR CCA 72 bp | GCCAGACAAGGGCATCAGATTCCCCAGGTGTTCCCTTaGTGCTTTCTTAACAAGGCAAATGAAGTACAAATC | + |
|
Preference number: 3 (lower is better) Translates to: ARQGHQIPQVFP*CFLNKANEVQI Trigger: GATTTGTACTTCATTTGCCTTGTTAAGAAAGCACCAAGGGAACACCTGGGGAATCTGATGCCCTTGTCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| 3UTR GCA 72 bp | CCGCCCCGTTCATTTGTGTCCATAGATTTAAACCAGTaGAAGAAGCCCCAAATCCTATCAGAAGATAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PPRSFVSIDLNQ*KKPQILSEDRV Trigger: CACTCTATCTTCTGATAGGATTTGGGGCTTCTTGCACTGGTTTAAATCTATGGACACAAATGAACGGGGCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| 3UTR GCA 72 bp | AGACAAGGGCATCAGATTCCCCAGGTGTTCCCTTGGTaGTTTCTTAACAAGGCAAATGAAGTACAAATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RQGHQIPQVFPW*FLNKANEVQIC Trigger: ACAGATTTGTACTTCATTTGCCTTGTTAAGAAAGCACCAAGGGAACACCTGGGGAATCTGATGCCCTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| 3UTR CCA 72 bp | TGTCCTGAGTTACACAATTACAGACATACGCTGTTATaGTCTGCATGTTGTATCGCCATACGTATAGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: CPELHNYRHTLL*SACCIAIRIVI Trigger: TATGACTATACGTATGGCGATACAACATGCAGACCATAACAGCGTATGTCTGTAATTGTGTAACTCAGGACA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGGAGACACGAGCTCCCTGCGCAGGGACAAACCTGGCGTGGCCCCAGACACGCTGGGGTGGATCTGTaGGAAGAAGACTGCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ERRHELPAQGQTWRGPRHAGVDL*EEDCQD Trigger: ATCCTGGCAGTCTTCTTCGCACAGATCCACCCCAGC...GTGTCTGGGGCCACGCCAGGTTTGTCCCTGCGCAGGGAGCTCGTGTCTCCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR GCA 90 bp | GTGGCCCCAGACACAGCCCTCCTGACCCCGGCCCGCTCGCCTGCTGATGCGCTGATACAGCATCACTACTaGAAGGACATGCCAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VAPDTALLTPARSPADALIQHHY*KDMPDL Trigger: CAGATCTGGCATGTCCTTGCAGTAGTGATGCTGTAT...CAGCGCATCAGCAGGCGAGCGGGCCGGGGTCAGGAGGGCTGTGTCTGGGGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR CCA 90 bp | CGCACGCCCGAGAGGGCCCGCAGACACAAGAAGGTGGGCCGCAGAGACTCCCAGGTAGTTCAGTTGTCCTaGAAAGTACCGTTCCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RTPERARRHKKVGRRDSQVVQLS*KVPFRD Trigger: GTCCCGGAACGGTACTTTCCAGGACAACTGAACTAC...CTGGGAGTCTCTGCGGCCCACCTTCTTGTGTCTGCGGGCCCTCTCGGGCGTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR TCA 90 bp | CGCACGCCCGAGAGGGCCCGCAGACACAAGAAGGTGGGCCGCAGAGACTCCCAGTGCATAAAATACTCCTaGGACATAGCAGCCCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RTPERARRHKKVGRRDSQCIKYS*DIAAQY Trigger: ATACTGGGCTGCTATGTCTCAGGAGTATTTTATGCA...CTGGGAGTCTCTGCGGCCCACCTTCTTGTGTCTGCGGGCCCTCTCGGGCGTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGAGGCCGCGACAGAATTCAGTACACGGGTCCTTCCACAGCGCAGAGACCCAGATCTGGTGGCTTaGTCCGAGGTAGTTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AWEAATEFSTRVLPQRRDPDLVA*SEVVQL Trigger: CAACTGAACTACCTCGGATCAAGCCACCAGATCTGG...GTCTCTGCGCTGTGGAAGGACCCGTGTACTGAATTCTGTCGCGGCCTCCCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR CCA 90 bp | GCCTGGGAGGCCGCGACAGAATTCAGTACACGGGTCCTTCCACAGCGCAGAGACTCACAAAGTCTTCTCTaGATGCGCTGGCGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AWEAATEFSTRVLPQRRDSQSLL*MRWRKA Trigger: TGCCTTCCGCCAGCGCATCCAGAGAAGACTTTGTGA...GTCTCTGCGCTGTGGAAGGACCCGTGTACTGAATTCTGTCGCGGCCTCCCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR TCA 90 bp | TCAGAGTGTGAACAGGCAAAGACCAAGAGAGGAGACACGAGCTCCCTGCGCAGGTCTGCCACTGCTGTGTaGGGTAGCTGGGGTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SECEQAKTKRGDTSSLRRSATAV*GSWGGS Trigger: AGATCCACCCCAGCTACCTCACACAGCAGTGGCAGA...CCTGCGCAGGGAGCTCGTGTCTCCTCTCTTGGTCTTTGCCTGTTCACACTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGAGGCCGCGACAGAATTCAGTACACGGGTCCTTCCACAGCGCAGAGACACATACACCGTGGACTaGTGCCACCAATACAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: AWEAATEFSTRVLPQRRDTYTVD*CHQYSI Trigger: GATGCTGTATTGGTGGCATCAGTCCACGGTGTATGT...GTCTCTGCGCTGTGGAAGGACCCGTGTACTGAATTCTGTCGCGGCCTCCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| 3UTR CAA 72 bp | AGCGGCTGGAGCCATGAGTGCCGCCTTGTGTTTTCTTaGGTTGGTGGTTTAGTCCCTGGGAGCTCTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGWSHECRLVFS*VGGLVPGSSGG Trigger: ACCCCCAGAGCTCCCAGGGACTAAACCACCAACCAAAGAAAACACAAGGCGGCACTCATGGCTCCAGCCGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGAGGCCGCGACAGAATTCAGTACACGGGTCCTTCCACAGCGCAGAGACCACAATTACTCGGGGTaGGAAGTCCTGTACAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: AWEAATEFSTRVLPQRRDHNYSG*EVLYNR Trigger: CCTATTGTACAGGACTTCGCACCCCGAGTAATTGTG...GTCTCTGCGCTGTGGAAGGACCCGTGTACTGAATTCTGTCGCGGCCTCCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR GCA 90 bp | CCAAAAATCAAAGTGTGCAGCACTTGGGCGGGGCTGGCAGACACTCTCTTTCACGCCAGTATTGGTAGCTaGCCAGCTCGATGTAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PKIKVCSTWAGLADTLFHASIGS*PARCSA Trigger: CGCACTACATCGAGCTGGGCAGCTACCAATACTGGC...GTGAAAGAGAGTGTCTGCCAGCCCCGCCCAAGTGCTGCACACTTTGATTTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAACCTGTCCCAGCATGCTTTTCCAGAGCAGGAGGACTTCGACGTGTTCACGCCAGTATTGGTAGCTaGCCAGCTCGATGTAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: EEPVPACFSRAGGLRRVHASIGS*PARCSA Trigger: CGCACTACATCGAGCTGGGCAGCTACCAATACTGGC...GTGAACACGTCGAAGTCCTCCTGCTCTGGAAAAGCATGCTGGGACAGGTTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR GCA 90 bp | CAACTCCGAGCAGATGTGCTGCTCCTGGGACAGAGGCATAGTGTGGGTTCAGGACCACCGAGCAAAGCATaGAGACCTGGAAGCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QLRADVLLLGQRHSVGSGPPSKA*RPGSRK Trigger: TTTTCTGCTTCCAGGTCTGCATGCTTTGCTCGGTGG...TCCTGAACCCACACTATGCCTCTGTCCCAGGAGCAGCACATCTGCTCGGAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| 3UTR CAA 72 bp | GAAGCTGGAGCAGGACACACGGACATACTCTGCTCATaGGGGAAGAATGACAACTCCGAGCAGATGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EAGAGHTDILCS*GKNDNSEQMCC Trigger: GCAGCACATCTGCTCGGAGTTGTCATTCTTCCCCAATGAGCAGAGTATGTCCGTGTGTCCTGCTCCAGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| 3UTR CAA 72 bp | GCTCCAATGGTTGGCTGTGAGCATCCACTTCTGTATTaGTCAGGCTCTGGCAGAGCCTCTCAGGAGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: APMVGCEHPLLY*SGSGRASQETA Trigger: AGCTGTCTCCTGAGAGGCTCTGCCAGAGCCTGACAAATACAGAAGTGGATGCTCACAGCCAACCATTGGAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAGTGTGAACAGGCAAAGACCAAGAGAGGAGACACGAGCTCCCTGCGCAGGTGTGTCTGTACTGCATaGCATACACCGTGGACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SECEQAKTKRGDTSSLRRCVCTA*HTPWTD Trigger: ATCAGTCCACGGTGTATGTCATGCAGTACAGACACA...CCTGCGCAGGGAGCTCGTGTCTCCTCTCTTGGTCTTTGCCTGTTCACACTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR GCA 90 bp | GGGTCCTTCCACAGCGCAGAGACATTGAGAATGGATGACTTTGGTGCCGTGCCCACTACTGCAAGGACATaGCAGATCTGGTGGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSFHSAETLRMDDFGAVPTTART*QIWWLD Trigger: ATCAAGCCACCAGATCTGGCATGTCCTTGCAGTAGT...GGGCACGGCACCAAAGTCATCCATTCTCAATGTCTCTGCGCTGTGGAAGGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR GCA 90 bp | AGCACAGAGGGGATGGGAAGAACCTGTCCCAGCATGCTTTTCCAGAGCAGGAGGTTGCTGTGTCTGTACTaGATGACATACACCGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: STEGMGRTCPSMLFQSRRLLCLY*MTYTVD Trigger: GTCCACGGTGTATGTCATGCAGTACAGACACAGCAA...CCTCCTGCTCTGGAAAAGCATGCTGGGACAGGTTCTTCCCATCCCCTCTGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR TCA 90 bp | AGCACAGAGGGGATGGGAAGAACCTGTCCCAGCATGCTTTTCCAGAGCAGGAGGAAGAAACCCAGCAAATaGCTCCAGATGTTTACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: STEGMGRTCPSMLFQSRRKKPSK*LQMFTV Trigger: GACGGTAAACATCTGGAGTCATTTGCTGGGTTTCTT...CCTCCTGCTCTGGAAAAGCATGCTGGGACAGGTTCTTCCCATCCCCTCTGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR TCA 90 bp | GTGGGCCGCAGAGACTCCCAGAGCAGCAATGAGTTTTTAACCATTTCCGATTCCTTGAGCCAAACCCAGTaGAGAGTAGGGATCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGRRDSQSSNEFLTISDSLSQTQ*RVGITP Trigger: TGGAGTGATCCCTACTCTTCACTGGGTTTGGCTCAA...GGAATCGGAAATGGTTAAAAACTCATTGCTGCTCTGGGAGTCTCTGCGGCCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR CCA 90 bp | TTCAGTCTCTGTATCTCCTCCCATGGGAGCTCCAACAGTGAGAGGTACCAAACTTCACAAAGTCTTCTCTaGATGCGCTGGCGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSLCISSHGSSNSERYQTSQSLL*MRWRKA Trigger: TGCCTTCCGCCAGCGCATCCAGAGAAGACTTTGTGA...AGTTTGGTACCTCTCACTGTTGGAGCTCCCATGGGAGGAGATACAGAGACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| 3UTR CAA 72 bp | AGTGAGAGAGGAGCCAAAAATCAAAGTGTGCAGCACTaGGGCGGGGCTGGCAGACACTCTCTTTCACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SERGAKNQSVQH*GGAGRHSLSLF Trigger: AAACAGTGAAAGAGAGTGTCTGCCAGCCCCGCCCAAGTGCTGCACACTTTGATTTTTGGCTCCTCTCTCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGCAGAGCCTCTCAGGAGACAGCTATATCAGACTCCTGTCAGCAAGCACCTCATATATCCCCAGGGTaGAGAAGAGAAAGAAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGRASQETAISDSCQQAPHISPG*RRERNP Trigger: TGGGTTTCTTTCTCTTCTTCACCCTGGGGATATATG...AGGTGCTTGCTGACAGGAGTCTGATATAGCTGTCTCCTGAGAGGCTCTGCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| CDS-3UTR TCA 90 bp | CCCCAGGTGTTCCCTTGGTGCTTTCTTAACAAGGCAAATGAAGTACAAATCTGTTCTGCCACTGCTGTGTaGGGTAGCTGGGGTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: PQVFPWCFLNKANEVQICSATAV*GSWGGS Trigger: AGATCCACCCCAGCTACCTCACACAGCAGTGGCAGA...ACAGATTTGTACTTCATTTGCCTTGTTAAGAAAGCACCAAGGGAACACCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR GCA 90 bp | TCTGGCAGAGCCTCTCAGGAGACAGCTATATCAGACTCCTGTCAGCAAGCACCTTCCTGCATAATCCAATaGCATCCATCTCCGACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGRASQETAISDSCQQAPSCIIQ*HPSPTS Trigger: ACTTGTCGGAGATGGATGGCATTGGATTATGCAGGA...AGGTGCTTGCTGACAGGAGTCTGATATAGCTGTCTCCTGAGAGGCTCTGCCAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| CDS-3UTR CCA 90 bp | GTCGGGCAGTTACTGGATGGCCTTTCCTTCAGTCTCTGTATCTCCTCCCATGGGCAAAGCATGCAGACCTaGAAGCAGAAAAGACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: VGQLLDGLSFSLCISSHGQSMQT*KQKRQM Trigger: CATTTGTCTTTTCTGCTTCCAGGTCTGCATGCTTTG...CCCATGGGAGGAGATACAGAGACTGAAGGAAAGGCCATCCAGTAACTGCCCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| 3UTR CAA 72 bp | AGACAGCTATATCAGACTCCTGTCAGCAAGCACCTGTaGGCATCCACAATAGTGTCTGGGTTTGGGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQLYQTPVSKHL*ASTIVSGFGVC Trigger: ACAGACCCCAAACCCAGACACTATTGTGGATGCCAACAGGTGCTTGCTGACAGGAGTCTGATATAGCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGCAGAGCCTCTCAGGAGACAGCTATATCAGACTCCTGTCAGCAAGCACCTTGCATAAAATACTCCTaGGACATAGCAGCCCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SGRASQETAISDSCQQAPCIKYS*DIAAQY Trigger: ATACTGGGCTGCTATGTCTCAGGAGTATTTTATGCA...AGGTGCTTGCTGACAGGAGTCTGATATAGCTGTCTCCTGAGAGGCTCTGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAGGTGTTCCCTTGGTGCTTTCTTAACAAGGCAAATGAAGTACAAATCTGTGCCAGTATTGGTAGCTaGCCAGCTCGATGTAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PQVFPWCFLNKANEVQICASIGS*PARCSA Trigger: CGCACTACATCGAGCTGGGCAGCTACCAATACTGGC...ACAGATTTGTACTTCATTTGCCTTGTTAAGAAAGCACCAAGGGAACACCTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR GCA 90 bp | GTGGGCCGCAGAGACTCCCAGAGCAGCAATGAGTTTTTAACCATTTCCGATTCCTCCTGCATAATCCAATaGCATCCATCTCCGACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VGRRDSQSSNEFLTISDSSCIIQ*HPSPTS Trigger: ACTTGTCGGAGATGGATGGCATTGGATTATGCAGGA...GGAATCGGAAATGGTTAAAAACTCATTGCTGCTCTGGGAGTCTCTGCGGCCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR GCA 90 bp | CCCCAGGTGTTCCCTTGGTGCTTTCTTAACAAGGCAAATGAAGTACAAATCTGTGCTGGGGTGGATCTGTaGGAAGAAGACTGCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PQVFPWCFLNKANEVQICAGVDL*EEDCQD Trigger: ATCCTGGCAGTCTTCTTCGCACAGATCCACCCCAGC...ACAGATTTGTACTTCATTTGCCTTGTTAAGAAAGCACCAAGGGAACACCTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR TCA 90 bp | CCCCAGGTGTTCCCTTGGTGCTTTCTTAACAAGGCAAATGAAGTACAAATCTGTCCAGATCTGGTGGCTTaGTCCGAGGTAGTTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PQVFPWCFLNKANEVQICPDLVA*SEVVQL Trigger: CAACTGAACTACCTCGGATCAAGCCACCAGATCTGG...ACAGATTTGTACTTCATTTGCCTTGTTAAGAAAGCACCAAGGGAACACCTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGTGTTCCCTTGGTGCTTTCTTAACAAGGCAAATGAAGTACAAATCTGTTCACAAAGTCTTCTCTaGATGCGCTGGCGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQVFPWCFLNKANEVQICSQSLL*MRWRKA Trigger: TGCCTTCCGCCAGCGCATCCAGAGAAGACTTTGTGA...ACAGATTTGTACTTCATTTGCCTTGTTAAGAAAGCACCAAGGGAACACCTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR CCA 90 bp | CGCAGAGACTCCCAGAGCAGCAATGAGTTTTTAACCATTTCCGATTCCAAGGAGACCGTTCCGGGACCTTaGAAATGTAGAACAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRDSQSSNEFLTISDSKETVPGP*KCRTGK Trigger: CTTTCCTGTTCTACATTTCCAAGGTCCCGGAACGGT...CTCCTTGGAATCGGAAATGGTTAAAAACTCATTGCTGCTCTGGGAGTCTCTGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR TCA 90 bp | GAGGACCTGTGCCTCTCTGTCCTGAGTTACACAATTACAGACATACGCTGTTATAAGAAACCCAGCAAATaGCTCCAGATGTTTACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: EDLCLSVLSYTITDIRCYKKPSK*LQMFTV Trigger: GACGGTAAACATCTGGAGTCATTTGCTGGGTTTCTT...ATAACAGCGTATGTCTGTAATTGTGTAACTCAGGACAGAGAGGCACAGGTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAGGTGTTCCCTTGGTGCTTTCTTAACAAGGCAAATGAAGTACAAATCTGTCACAATTACTCGGGGTaGGAAGTCCTGTACAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQVFPWCFLNKANEVQICHNYSG*EVLYNR Trigger: CCTATTGTACAGGACTTCGCACCCCGAGTAATTGTG...ACAGATTTGTACTTCATTTGCCTTGTTAAGAAAGCACCAAGGGAACACCTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR TCA 90 bp | CCCCAGGTGTTCCCTTGGTGCTTTCTTAACAAGGCAAATGAAGTACAAATCTGTCATATATCCCCAGGGTaGAGAAGAGAAAGAAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQVFPWCFLNKANEVQICHISPG*RRERNP Trigger: TGGGTTTCTTTCTCTTCTTCACCCTGGGGATATATG...ACAGATTTGTACTTCATTTGCCTTGTTAAGAAAGCACCAAGGGAACACCTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAGGTGTTCCCTTGGTGCTTTCTTAACAAGGCAAATGAAGTACAAATCTGTTCCTGCATAATCCAATaGCATCCATCTCCGACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQVFPWCFLNKANEVQICSCIIQ*HPSPTS Trigger: ACTTGTCGGAGATGGATGGCATTGGATTATGCAGGA...ACAGATTTGTACTTCATTTGCCTTGTTAAGAAAGCACCAAGGGAACACCTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCCCTTGGTGCTTTCTTAACAAGGCAAATGAAGTACAAATCTGTTCTTAGCTTGAGCCAAACCCAGTaGAGAGTAGGGATCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSLGAFLTRQMKYKSVLSLSQTQ*RVGITP Trigger: TGGAGTGATCCCTACTCTTCACTGGGTTTGGCTCAA...GCTAAGAACAGATTTGTACTTCATTTGCCTTGTTAAGAAAGCACCAAGGGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGTGTTCCCTTGGTGCTTTCTTAACAAGGCAAATGAAGTACAAATCTGTCAAAGCATGCAGACCTaGAAGCAGAAAAGACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PQVFPWCFLNKANEVQICQSMQT*KQKRQM Trigger: CATTTGTCTTTTCTGCTTCCAGGTCTGCATGCTTTG...ACAGATTTGTACTTCATTTGCCTTGTTAAGAAAGCACCAAGGGAACACCTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR GCA 90 bp | AGATTTATTTTTATTGTTGGTGTACGGGTGTTTTGGCTACATGTATGTCTGCACCCACCGAGCAAAGCATaGAGACCTGGAAGCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RFIFIVGVRVFWLHVCLHPPSKA*RPGSRK Trigger: TTTTCTGCTTCCAGGTCTGCATGCTTTGCTCGGTGG...GTGCAGACATACATGTAGCCAAAACACCCGTACACCAACAATAAAAATAAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR GCA 90 bp | TGTTCCCTTGGTGCTTTCTTAACAAGGCAAATGAAGTACAAATCTGTTCTTAGCTTGCTGTGTCTGTACTaGATGACATACACCGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSLGAFLTRQMKYKSVLSLLCLY*MTYTVD Trigger: GTCCACGGTGTATGTCATGCAGTACAGACACAGCAA...GCTAAGAACAGATTTGTACTTCATTTGCCTTGTTAAGAAAGCACCAAGGGAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR TCA 90 bp | AAGATTTATTTTTATTGTTGGTGTACGGGTGTTTTGGCTACATGTATGTCTGCAACATACACCGTGGACTaGTGCCACCAATACAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KIYFYCWCTGVLATCMSATYTVD*CHQYSI Trigger: GATGCTGTATTGGTGGCATCAGTCCACGGTGTATGT...TGCAGACATACATGTAGCCAAAACACCCGTACACCAACAATAAAAATAAATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR TCA 90 bp | AGATTTATTTTTATTGTTGGTGTACGGGTGTTTTGGCTACATGTATGTCTGCACTGTGTCTGTACTGCATaGCATACACCGTGGACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RFIFIVGVRVFWLHVCLHCVCTA*HTPWTD Trigger: ATCAGTCCACGGTGTATGTCATGCAGTACAGACACA...GTGCAGACATACATGTAGCCAAAACACCCGTACACCAACAATAAAAATAAATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR GCA 90 bp | AGATTTATTTTTATTGTTGGTGTACGGGTGTTTTGGCTACATGTATGTCTGCACACTACTGCAAGGACATaGCAGATCTGGTGGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RFIFIVGVRVFWLHVCLHTTART*QIWWLD Trigger: ATCAAGCCACCAGATCTGGCATGTCCTTGCAGTAGT...GTGCAGACATACATGTAGCCAAAACACCCGTACACCAACAATAAAAATAAATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR CCA 90 bp | AGATTTATTTTTATTGTTGGTGTACGGGTGTTTTGGCTACATGTATGTCTGCACACCGTTCCGGGACCTTaGAAATGTAGAACAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RFIFIVGVRVFWLHVCLHTVPGP*KCRTGK Trigger: CTTTCCTGTTCTACATTTCCAAGGTCCCGGAACGGT...GTGCAGACATACATGTAGCCAAAACACCCGTACACCAACAATAAAAATAAATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR CCA 90 bp | AAGATTTATTTTTATTGTTGGTGTACGGGTGTTTTGGCTACATGTATGTCTGCAGTAGTTCAGTTGTCCTaGAAAGTACCGTTCCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KIYFYCWCTGVLATCMSAVVQLS*KVPFRD Trigger: GTCCCGGAACGGTACTTTCCAGGACAACTGAACTAC...TGCAGACATACATGTAGCCAAAACACCCGTACACCAACAATAAAAATAAATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR GCA 90 bp | AGATTTATTTTTATTGTTGGTGTACGGGTGTTTTGGCTACATGTATGTCTGCACATACAGCATCACTACTaGAAGGACATGCCAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RFIFIVGVRVFWLHVCLHIQHHY*KDMPDL Trigger: CAGATCTGGCATGTCCTTGCAGTAGTGATGCTGTAT...GTGCAGACATACATGTAGCCAAAACACCCGTACACCAACAATAAAAATAAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR TCA 90 bp | AAGATTTATTTTTATTGTTGGTGTACGGGTGTTTTGGCTACATGTATGTCTGCAAAGAAACCCAGCAAATaGCTCCAGATGTTTACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KIYFYCWCTGVLATCMSAKKPSK*LQMFTV Trigger: GACGGTAAACATCTGGAGTCATTTGCTGGGTTTCTT...TGCAGACATACATGTAGCCAAAACACCCGTACACCAACAATAAAAATAAATCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR TCA 90 bp | AGATTTATTTTTATTGTTGGTGTACGGGTGTTTTGGCTACATGTATGTCTGCACTGCATAAAATACTCCTaGGACATAGCAGCCCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RFIFIVGVRVFWLHVCLHCIKYS*DIAAQY Trigger: ATACTGGGCTGCTATGTCTCAGGAGTATTTTATGCA...GTGCAGACATACATGTAGCCAAAACACCCGTACACCAACAATAAAAATAAATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS GCA 90 bp | AGAGGCGGATGCCGCGGGGTACCAGGACCGGCCAGTATTGGTAGCTaGCCAGCTCGATGTAGTGCGCACTCTTCAGCAGCTTCTGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: RGGCRGVPGPASIGS*PARCSAHSSAASDA Trigger: TGCATCAGAAGCTGCTGAAGAGTGCGCACTACATCGAGCTGGGCAGCTACCAATACTGGCCGGTCCTGGTACCCCGCGGCATCCGCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069453.9 ENSMUST00000112968.2 ENSMUST00000112969.10 ENSMUST00000196078.5 |
||
| CDS-3UTR CAA 90 bp | TCAGAGTGTGAACAGGCAAAGACCAAGAGAGGAGACACGAGCTCCCTGCGCAGGCAGGACCGGCCAGTATaGGTAGCTGCCCAGCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: SECEQAKTKRGDTSSLRRQDRPV*VAAQLD Trigger: ATCGAGCTGGGCAGCTACCAATACTGGCCGGTCCTG...CCTGCGCAGGGAGCTCGTGTCTCCTCTCTTGGTCTTTGCCTGTTCACACTCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS-3UTR CAA 90 bp | TCAGAGTGTGAACAGGCAAAGACCAAGAGAGGAGACACGAGCTCCCTGCGCAGGTCCGAGGTAGTTCAGTaGTCCTGGAAAGTACCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SECEQAKTKRGDTSSLRRSEVVQ*SWKVPF Trigger: GAACGGTACTTTCCAGGACAACTGAACTACCTCGGA...CCTGCGCAGGGAGCTCGTGTCTCCTCTCTTGGTCTTTGCCTGTTCACACTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS TCA 90 bp | GGGCAAGGCTTGCTGTGTCTGTACTGCATGACATACACCGTGGACTaGTGCCACCAATACAGCATCACTACTGCAAGGACATGCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: GQGLLCLYCMTYTVD*CHQYSITTARTCQI Trigger: GATCTGGCATGTCCTTGCAGTAGTGATGCTGTATTGGTGGCATCAGTCCACGGTGTATGTCATGCAGTACAGACACAGCAAGCCTTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069453.9 ENSMUST00000112969.10 |
||
| CDS-3UTR CAA 90 bp | GAGGACCTGTGCCTCTCTGTCCTGAGTTACACAATTACAGACATACGCTGTTATCAGGACCGGCCAGTATaGGTAGCTGCCCAGCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: EDLCLSVLSYTITDIRCYQDRPV*VAAQLD Trigger: ATCGAGCTGGGCAGCTACCAATACTGGCCGGTCCTG...ATAACAGCGTATGTCTGTAATTGTGTAACTCAGGACAGAGAGGCACAGGTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| CDS TCA 90 bp | GGTGGGAAACATAGTCAGGGCAAGGCTTGCTGTGTCTGTACTGCATaGCATACACCGTGGACTGATGCCACCAATACAGCATCACTACTG | + |
|
Preference number: 5 (lower is better) Translates to: GGKHSQGKACCVCTA*HTPWTDATNTASLL Trigger: CAGTAGTGATGCTGTATTGGTGGCATCAGTCCACGGTGTATGTCATGCAGTACAGACACAGCAAGCCTTGCCCTGACTATGTTTCCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069453.9 ENSMUST00000112969.10 |
||
| CDS-3UTR CAA 90 bp | AAGAAGGTGGGCCGCAGAGACTCCCAGAGCAGCAATGAGTTTTTAACCATTTCCGCCAGATCTGGTGGCTaGATCCGAGGTAGTTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KKVGRRDSQSSNEFLTISARSGG*IRGSSV Trigger: AACTGAACTACCTCGGATCAAGCCACCAGATCTGGC...GGAAATGGTTAAAAACTCATTGCTGCTCTGGGAGTCTCTGCGGCCCACCTTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112969.10 |
||
| CDS TCA 90 bp | TCCTGTACAATAGGAGCACTGACTCCTCCATTGAGCCAAACCCAGTaGAGAGTAGGGATCACTCCATATCCCGAAACAGAGCAGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SCTIGALTPPLSQTQ*RVGITPYPETEQKM Trigger: CATCTTCTGCTCTGTTTCGGGATATGGAGTGATCCCTACTCTTCACTGGGTTTGGCTCAATGGAGGAGTCAGTGCTCCTATTGTACAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069453.9 ENSMUST00000112969.10 ENSMUST00000196078.5 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGTGTTCCCTTGGTGCTTTCTTAACAAGGCAAATGAAGTACAAATCTGTGCCAGATCTGGTGGCTaGATCCGAGGTAGTTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PQVFPWCFLNKANEVQICARSGG*IRGSSV Trigger: AACTGAACTACCTCGGATCAAGCCACCAGATCTGGC...ACAGATTTGTACTTCATTTGCCTTGTTAAGAAAGCACCAAGGGAACACCTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS TCA 90 bp | GGTGGATCTGTGCGAAGAAGACTGCCAGGATCATGGCAAGCACGGTaGTCAGGTACACTTGACGCCAGTAATTATTGCAATAAAATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GGSVRRRLPGSWQAR*SGTLDASNYCNKMH Trigger: ATGCATTTTATTGCAATAATTACTGGCGTCAAGTGTACCTGATCACCGTGCTTGCCATGATCCTGGCAGTCTTCTTCGCACAGATCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069453.9 ENSMUST00000112969.10 |
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| CDS-3UTR CAA 90 bp | GGCAGAGCCTCTCAGGAGACAGCTATATCAGACTCCTGTCAGCAAGCACCTGTTAGGATAAACAAACTTTaGATACACAGTCTGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GRASQETAISDSCQQAPVRINKL*IHSLEG Trigger: TCCTTCCAGACTGTGTATCAAAAGTTTGTTTATCCT...AACAGGTGCTTGCTGACAGGAGTCTGATATAGCTGTCTCCTGAGAGGCTCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112968.2 |
||
| CDS-3UTR CAA 90 bp | AAGATTTATTTTTATTGTTGGTGTACGGGTGTTTTGGCTACATGTATGTCTGCACAGGACCGGCCAGTATaGGTAGCTGCCCAGCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: KIYFYCWCTGVLATCMSAQDRPV*VAAQLD Trigger: ATCGAGCTGGGCAGCTACCAATACTGGCCGGTCCTG...TGCAGACATACATGTAGCCAAAACACCCGTACACCAACAATAAAAATAAATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS-3UTR CAA 90 bp | TGTTCCCTTGGTGCTTTCTTAACAAGGCAAATGAAGTACAAATCTGTTCTTAGCTCCGAGGTAGTTCAGTaGTCCTGGAAAGTACCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSLGAFLTRQMKYKSVLSSEVVQ*SWKVPF Trigger: GAACGGTACTTTCCAGGACAACTGAACTACCTCGGA...GCTAAGAACAGATTTGTACTTCATTTGCCTTGTTAAGAAAGCACCAAGGGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS TCA 90 bp | ATGTCATATATCCCCAGGGTGAAGAAGAGAAAGAAACCCAGCAAATaGCTCCAGATGTTTACCGTCTCATTAGACAGGATAAACAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: MSYIPRVKKRKKPSK*LQMFTVSLDRINKL Trigger: AAGTTTGTTTATCCTGTCTAATGAGACGGTAAACATCTGGAGTCATTTGCTGGGTTTCTTTCTCTTCTTCACCCTGGGGATATATGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069453.9 ENSMUST00000112968.2 ENSMUST00000112969.10 ENSMUST00000196078.5 |
||
| CDS-3UTR CAA 90 bp | TGTTCCCTTGGTGCTTTCTTAACAAGGCAAATGAAGTACAAATCTGTTCTTAGCAGGATAAACAAACTTTaGATACACAGTCTGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSLGAFLTRQMKYKSVLSRINKL*IHSLEG Trigger: TCCTTCCAGACTGTGTATCAAAAGTTTGTTTATCCT...GCTAAGAACAGATTTGTACTTCATTTGCCTTGTTAAGAAAGCACCAAGGGAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069453.9 |
||
| CDS CAA 72 bp | GAGGCGGATGCCGCGGGGTACCAGGACCGGCCAGTATaGGTAGCTGCCCAGCTCGATGTAGTGCGCACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: EADAAGYQDRPV*VAAQLDVVRTL Trigger: AAGAGTGCGCACTACATCGAGCTGGGCAGCTACCAATACTGGCCGGTCCTGGTACCCCGCGGCATCCGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069453.9 ENSMUST00000112968.2 ENSMUST00000112969.10 ENSMUST00000196078.5 |
||
| CDS GCA 72 bp | TGCCGCGGGGTACCAGGACCGGCCAGTATTGGTAGCTaGCCAGCTCGATGTAGTGCGCACTCTTCAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CRGVPGPASIGS*PARCSAHSSAA Trigger: AGCTGCTGAAGAGTGCGCACTACATCGAGCTGGGCAGCTACCAATACTGGCCGGTCCTGGTACCCCGCGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069453.9 ENSMUST00000112968.2 ENSMUST00000112969.10 ENSMUST00000196078.5 |
||
| CDS GCA 72 bp | GGGATACCGGGATCTGTTCATAGGTGTAGAGGCGGATaGCGCGGGGTACCAGGACCGGCCAGTATTGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: GIPGSVHRCRGG*RGVPGPASIGS Trigger: GCTACCAATACTGGCCGGTCCTGGTACCCCGCGGCATCCGCCTCTACACCTATGAACAGATCCCGGTATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069453.9 ENSMUST00000112968.2 ENSMUST00000112969.10 ENSMUST00000196078.5 |
||
| CDS CAA 90 bp | ATAGGTGTAGAGGCGGATGCCGCGGGGTACCAGGACCGGCCAGTATaGGTAGCTGCCCAGCTCGATGTAGTGCGCACTCTTCAGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: IGVEADAAGYQDRPV*VAAQLDVVRTLQQL Trigger: AAGCTGCTGAAGAGTGCGCACTACATCGAGCTGGGCAGCTACCAATACTGGCCGGTCCTGGTACCCCGCGGCATCCGCCTCTACACCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069453.9 ENSMUST00000112968.2 ENSMUST00000112969.10 ENSMUST00000196078.5 |
||
| CDS GCA 72 bp | CTGCCACTGCTGTGTGAGGTAGCTGGGGTGGATCTGTaGGAAGAAGACTGCCAGGATCATGGCAAGCACGGT | + |
|
Preference number: 6 (lower is better) Translates to: LPLLCEVAGVDL*EEDCQDHGKHG Trigger: ACCGTGCTTGCCATGATCCTGGCAGTCTTCTTCGCACAGATCCACCCCAGCTACCTCACACAGCAGTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069453.9 ENSMUST00000112969.10 |
||
| CDS TCA 72 bp | CATAGTCAGGGCAAGGCTTGCTGTGTCTGTACTGCATaGCATACACCGTGGACTGATGCCACCAATACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HSQGKACCVCTA*HTPWTDATNTA Trigger: TGCTGTATTGGTGGCATCAGTCCACGGTGTATGTCATGCAGTACAGACACAGCAAGCCTTGCCCTGACTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069453.9 ENSMUST00000112969.10 |
||
| CDS TCA 72 bp | ATAGGAGCACTGACTCCTCCATTGAGCCAAACCCAGTaGAGAGTAGGGATCACTCCATATCCCGAAACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: IGALTPPLSQTQ*RVGITPYPETE Trigger: CTCTGTTTCGGGATATGGAGTGATCCCTACTCTTCACTGGGTTTGGCTCAATGGAGGAGTCAGTGCTCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069453.9 ENSMUST00000112969.10 ENSMUST00000196078.5 |
||
| CDS TCA 72 bp | GTGCGAAGAAGACTGCCAGGATCATGGCAAGCACGGTaGTCAGGTACACTTGACGCCAGTAATTATTGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: VRRRLPGSWQAR*SGTLDASNYCN Trigger: ATTGCAATAATTACTGGCGTCAAGTGTACCTGATCACCGTGCTTGCCATGATCCTGGCAGTCTTCTTCGCAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069453.9 ENSMUST00000112969.10 |
||
| CDS TCA 72 bp | TTGCTGTGTCTGTACTGCATGACATACACCGTGGACTaGTGCCACCAATACAGCATCACTACTGCAAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: LLCLYCMTYTVD*CHQYSITTART Trigger: TGTCCTTGCAGTAGTGATGCTGTATTGGTGGCATCAGTCCACGGTGTATGTCATGCAGTACAGACACAGCAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069453.9 ENSMUST00000112969.10 |
||
| CDS GCA 72 bp | AAGACAAATGGAGCAAATCACAAAGTCTTCTCTGGATaGGCTGGCGGAAGGCAGCACGGATGTCATGTCATA | + |
|
Preference number: 6 (lower is better) Translates to: KTNGANHKVFSG*AGGRQHGCHVI Trigger: TATGACATGACATCCGTGCTGCCTTCCGCCAGCGCATCCAGAGAAGACTTTGTGATTTGCTCCATTTGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069453.9 ENSMUST00000112968.2 ENSMUST00000112969.10 ENSMUST00000196078.5 |
||
| CDS CAA 72 bp | TGCCAGGATCATGGCAAGCACGGTGATCAGGTACACTaGACGCCAGTAATTATTGCAATAAAATGCATAAAA | + |
|
Preference number: 6 (lower is better) Translates to: CQDHGKHGDQVH*TPVIIAIKCIK Trigger: TTTTATGCATTTTATTGCAATAATTACTGGCGTCAAGTGTACCTGATCACCGTGCTTGCCATGATCCTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069453.9 ENSMUST00000112969.10 |
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