Pregenerated sensors for PAPSS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028032Ensembl transcript IDs: ENSMUST00000029666.14, ENSMUST00000196638.2, ENSMUST00000197402.5, ENSMUST00000199878.5, ENSMUST00000200527.5
Found 218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAGGAAGTGTGTCCAGTCAGACAACCGCAGAGAAGGGCTGTCGGTaGCTGCGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: SGSVSSQTTAEKGCR*LRGPLCYSAMRPRQ Trigger: CTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACGCAGCCACCGACAGCCCTTCTCTGCGGTTGTCTGACTGGACACACTTCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029666.14 ENSMUST00000197402.5 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| 3UTR TCA 90 bp | TGTCCCGTTCCTGAAGAAGCTCCACAACCTGCTGGACGCAGTCGTTaGCGTCACAGGAATCCGTTTTCAGCACCAGCTCCGGGGCCTCGG | + |
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Preference number: 1 (lower is better) Translates to: CPVPEEAPQPAGRSR*RHRNPFSAPAPGPR Trigger: CCGAGGCCCCGGAGCTGGTGCTGAAAACGGATTCCTGTGACGTCAACGACTGCGTCCAGCAGGTTGTGGAGCTTCTTCAGGAACGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR GCA 90 bp | TGTAGCACGGAATGCCGTGGCACACCAGGTACTCCTCCAGAGCCATaGTCACGGTCGTCTTCCCTGCTCCGGACAATCCTCCTCCATGTT | + |
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Preference number: 1 (lower is better) Translates to: CSTECRGTPGTPPEP*SRSSSLLRTILLHV Trigger: AACATGGAGGAGGATTGTCCGGAGCAGGGAAGACGACCGTGAGCATGGCTCTGGAGGAGTACCTGGTGTGCCACGGCATTCCGTGCTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
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| 3UTR CCA 90 bp | GGTAATCAGGCCTGGGGCCATCGTCAGCACTTTGGCACCATGTGTTaGCTCATAGAGGTCCTTCCCTGTCTCCGGATGAGGCATGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: GNQAWGHRQHFGTMC*LIEVLPCLRMRHAS Trigger: GCTGGCATGCCTCATCCGGAGACAGGGAAGGACCTCTATGAGCCAACACATGGTGCCAAAGTGCTGACGATGGCCCCAGGCCTGATTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR GCA 90 bp | ACCAGAGCGAACGCGGTGCAGCCGTCCAGCCTCTCCTTATCCTCGTaGGTAGCTGTCAGAACTATAGGCACCGATAAGTTGATGACGCCT | + |
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Preference number: 1 (lower is better) Translates to: TRANAVQPSSLSLSS*VAVRTIGTDKLMTP Trigger: AGGCGTCATCAACTTATCGGTGCCTATAGTTCTGACAGCTACGCACGAGGATAAGGAGAGGCTGGACGGCTGCACCGCGTTCGCTCTGGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR GCA 90 bp | GCACACCAGGTACTCCTCCAGAGCCATGCTCACGGTCGTCTTCCCTaGTCCGGACAATCCTCCTCCATGTTCCAGGATCTTATAAACCAC | + |
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Preference number: 1 (lower is better) Translates to: AHQVLLQSHAHGRLP*SGQSSSMFQDLINH Trigger: GTGGTTTATAAGATCCTGGAACATGGAGGAGGATTGTCCGGAGCAGGGAAGACGACCGTGAGCATGGCTCTGGAGGAGTACCTGGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
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| 3UTR GCA 90 bp | CATGTGTTGGCTCATAGAGGTCCTTCCCTGTCTCCGGATGAGGCATaGCAGCAGGGTCTCGTCCAACAATATAAAAATTGGCTCCGGCCA | + |
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Preference number: 1 (lower is better) Translates to: HVLAHRGPSLSPDEA*QQGLVQQYKNWLRP Trigger: TGGCCGGAGCCAATTTTTATATTGTTGGACGAGACCCTGCTGGCATGCCTCATCCGGAGACAGGGAAGGACCTCTATGAGCCAACACATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR CCA 90 bp | GTAAGCTGCAACTCGGAAGGGAACGATTTCCAAGGTAATCAGGCCTaGGGCCATCGTCAGCACTTTGGCACCATGTGTTGGCTCATAGAG | + |
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Preference number: 1 (lower is better) Translates to: VSCNSEGNDFQGNQA*GHRQHFGTMCWLIE Trigger: CTCTATGAGCCAACACATGGTGCCAAAGTGCTGACGATGGCCCCAGGCCTGATTACCTTGGAAATCGTTCCCTTCCGAGTTGCAGCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR TCA 90 bp | GAAGACAATCGAAATGGAGGCACTGCAAGTACTCCCTCTCTCTCATaGAGCCGTTCAGAGGAGTCGCCCAACCTTCTGCCAAAACCTGCA | + |
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Preference number: 1 (lower is better) Translates to: EDNRNGGTASTPSLS*SRSEESPNLLPKPA Trigger: TGCAGGTTTTGGCAGAAGGTTGGGCGACTCCTCTGAACGGCTTCATGAGAGAGAGGGAGTACTTGCAGTGCCTCCATTTCGATTGTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR TCA 90 bp | TGGAGGTTTCTGGCCTTCGCGTGCCAGCTTGCGCATCCTCGTTCCTaGAATAAACTCGAAGTCTTCGTGGTGCTCAGAGTCATAGTAGTC | + |
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Preference number: 1 (lower is better) Translates to: WRFLAFACQLAHPRS*NKLEVFVVLRVIVV Trigger: GACTACTATGACTCTGAGCACCACGAAGACTTCGAGTTTATTTCAGGAACGAGGATGCGCAAGCTGGCACGCGAAGGCCAGAAACCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR GCA 90 bp | AAGTTGATGACGCCTCCATCCAGAAGACAATCGAAATGGAGGCACTaGAAGTACTCCCTCTCTCTCATGAAGCCGTTCAGAGGAGTCGCC | + |
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Preference number: 1 (lower is better) Translates to: KLMTPPSRRQSKWRH*KYSLSLMKPFRGVA Trigger: GGCGACTCCTCTGAACGGCTTCATGAGAGAGAGGGAGTACTTGCAGTGCCTCCATTTCGATTGTCTTCTGGATGGAGGCGTCATCAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR GCA 90 bp | CCGTTCAGAGGAGTCGCCCAACCTTCTGCCAAAACCTGCACCCACTaGATATCCACTTTATTGATTTTCAGGGCTGGTAAGGCTTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: PFRGVAQPSAKTCTH*ISTLLIFRAGKASA Trigger: TGCAGAAGCCTTACCAGCCCTGAAAATCAATAAAGTGGATATGCAGTGGGTGCAGGTTTTGGCAGAAGGTTGGGCGACTCCTCTGAACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR CCA 90 bp | GGCACCGATAAGTTGATGACGCCTCCATCCAGAAGACAATCGAAATaGAGGCACTGCAAGTACTCCCTCTCTCTCATGAAGCCGTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: GTDKLMTPPSRRQSK*RHCKYSLSLMKPFR Trigger: TCTGAACGGCTTCATGAGAGAGAGGGAGTACTTGCAGTGCCTCCATTTCGATTGTCTTCTGGATGGAGGCGTCATCAACTTATCGGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR GCA 90 bp | CTCCCTCTCTCTCATGAAGCCGTTCAGAGGAGTCGCCCAACCTTCTaGCAAAACCTGCACCCACTGCATATCCACTTTATTGATTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: LPLSHEAVQRSRPTF*QNLHPLHIHFIDFQ Trigger: CTGAAAATCAATAAAGTGGATATGCAGTGGGTGCAGGTTTTGGCAGAAGGTTGGGCGACTCCTCTGAACGGCTTCATGAGAGAGAGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR GCA 90 bp | GACATGCAGAGGAGCATCGACAAAAACTTCAAAGAAGGGCAAGCTTaGACCCTCATGAATCTGCCTTGCGTTGTTGCGATCCTGTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: DMQRSIDKNFKEGQA*TLMNLPCVVAILCV Trigger: TACACACAGGATCGCAACAACGCAAGGCAGATTCATGAGGGTGCAAGCTTGCCCTTCTTTGAAGTTTTTGTCGATGCTCCTCTGCATGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
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| 3UTR TCA 90 bp | TCCTGCATTAACAGAGCGTGCCCGTTGTGCACTGGGTTGCGCAACTaGAATGCAAAGACAGCATCAGCGTTCATATCTTTAAACTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: SCINRACPLCTGLRN*NAKTASAFISLNFC Trigger: GCAGAAGTTTAAAGATATGAACGCTGATGCTGTCTTTGCATTTCAGTTGCGCAACCCAGTGCACAACGGGCACGCTCTGTTAATGCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR GCA 90 bp | AAAAACTTCAAAGAAGGGCAAGCTTGCACCCTCATGAATCTGCCTTaGGTTGTTGCGATCCTGTGTGTAAGGCGATATAAAGCTGGTGAT | + |
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Preference number: 1 (lower is better) Translates to: KNFKEGQACTLMNLP*VVAILCVRRYKAGD Trigger: ATCACCAGCTTTATATCGCCTTACACACAGGATCGCAACAACGCAAGGCAGATTCATGAGGGTGCAAGCTTGCCCTTCTTTGAAGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
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| 3UTR GCA 90 bp | TTAATTTTATTGAATCAAGGCATTCATTCAGTACTTAACACAGATTaGAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LILLNQGIHSVLNTD*KRTSTRRAARERGS Trigger: GCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATCTGTGTTAAGTACTGAATGAATGCCTTGATTCAATAAAATTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029666.14 ENSMUST00000197402.5 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| 3UTR-3UTR GCA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCGCCCTCCTCCAGCACTaGAGCGTGCTGCTTCATACG | + |
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Preference number: 2 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSALLQH*SVLLHT Trigger: CGTATGAAGCAGCACGCTGCAGTGCTGGAGGAGGGC...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR-3UTR GCA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCCGTTGTGCACTGGGTTaGGCAACTGAAATGCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSRCALG*ATEMQR Trigger: TCTTTGCATTTCAGTTGCGCAACCCAGTGCACAACG...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR-3UTR GCA 90 bp | ACACAGATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCATCTGTTACTCAGCCATaGGTCCCAGGCAGAGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: TQIAREPQHVGLQGRGGASVTQP*VPGRVP Trigger: GGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGA...TGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATCTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029666.14 ENSMUST00000197402.5 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| 3UTR-3UTR CCA 90 bp | GAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGGAGAAGGGCTGTCGGTaGCTGCGTGGTCCCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: ERQTKTNARGGKRPDFRKEKGCR*LRGPLC Trigger: ACAGAGGGGACCACGCAGCCACCGACAGCCCTTCTC...CTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029666.14 ENSMUST00000197402.5 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| 3UTR-3UTR GCA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTCTGTTACTCAGCCATaGGTCCCAGGCAGAGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: CKRTSTRRAARERGSSLHSVTQP*VPGRVP Trigger: GGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGA...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029666.14 ENSMUST00000197402.5 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| 3UTR-3UTR TCA 90 bp | GATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACGGAGGGAAACGGCCTaGTTTCAGGAAGTGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: DCKRTSTRRAARERGSSLRRETA*FQEVCP Trigger: TGGACACACTTCCTGAAATCAGGCCGTTTCCCTCCG...TAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029666.14 ENSMUST00000197402.5 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| 3UTR-3UTR TCA 90 bp | TGGGGCCATCGTCAGCACTTTGGCACCATGTGTTGGCTCATAGAGGTCCTTCCCTCTTGTAGAGGCCTTTaGCATCCCTCTGCTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: WGHRQHFGTMCWLIEVLPSCRGL*HPSAHR Trigger: TCTGTGAGCAGAGGGATGTCAAAGGCCTCTACAAGA...GGGAAGGACCTCTATGAGCCAACACATGGTGCCAAAGTGCTGACGATGGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR-3UTR GCA 90 bp | GCAAGCTTGCACCCTCATGAATCTGCCTTGCGTTGTTGCGATCCTGTGTGTAAGACTCCTCCAGAGCCATaGTCACGGTCGTCTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: ASLHPHESALRCCDPVCKTPPEP*SRSSSL Trigger: CAGGGAAGACGACCGTGAGCATGGCTCTGGAGGAGT...CTTACACACAGGATCGCAACAACGCAAGGCAGATTCATGAGGGTGCAAGCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTCTGTCCTCAGGACTGAAGCCGAGGTTCTTATTGAGTCCTTGGCGGATGACTCCTCCAGAGCCATaGTCACGGTCGTCTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: SSLSSGLKPRFLLSPWRMTPPEP*SRSSSL Trigger: CAGGGAAGACGACCGTGAGCATGGCTCTGGAGGAGT...CATCCGCCAAGGACTCAATAAGAACCTCGGCTTCAGTCCTGAGGACAGAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
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| 3UTR-3UTR TCA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGACGGAGGGAAACGGCCTaGTTTCAGGAAGTGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: LKDRPKPMHAEGNGLISGRRETA*FQEVCP Trigger: TGGACACACTTCCTGAAATCAGGCCGTTTCCCTCCG...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029666.14 ENSMUST00000197402.5 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| 3UTR CAA 90 bp | CTCTTCTCTGTCCTCAGGACTGAAGCCGAGGTTCTTATTGAGTCCTaGGCGGATGTTGTCACCATCCAAAGTGTAGCACGGAATGCCGTG | + |
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Preference number: 2 (lower is better) Translates to: LFSVLRTEAEVLIES*ADVVTIQSVARNAV Trigger: CACGGCATTCCGTGCTACACTTTGGATGGTGACAACATCCGCCAAGGACTCAATAAGAACCTCGGCTTCAGTCCTGAGGACAGAGAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTCGGAGGGAAACGGCCTaGTTTCAGGAAGTGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: KRTSTRRAARERGSSLHFRRETA*FQEVCP Trigger: TGGACACACTTCCTGAAATCAGGCCGTTTCCCTCCG...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029666.14 ENSMUST00000197402.5 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| 3UTR-3UTR GCA 90 bp | ACTATAGGCACCGATAAGTTGATGACGCCTCCATCCAGAAGACAATCGAAATGGTCTGTTACTCAGCCATaGGTCCCAGGCAGAGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: TIGTDKLMTPPSRRQSKWSVTQP*VPGRVP Trigger: GGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGA...CCATTTCGATTGTCTTCTGGATGGAGGCGTCATCAACTTATCGGTGCCTATAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTTCTTGCATGTTGTTCCCCACTGTCTGGCACACCGCTCCTCTTTCCGGTGGTGTTACACTAGTTTaGAACAGAACTGAAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: GGSCMLFPTVWHTAPLSGGVTLV*NRTERQ Trigger: CTGTCTTTCAGTTCTGTTTCAAACTAGTGTAACACC...ACCGGAAAGAGGAGCGGTGTGCCAGACAGTGGGGAACAACATGCAAGAACCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR CAA 90 bp | AGACATGCAGAGGAGCATCGACAAAAACTTCAAAGAAGGGCAAGCTaGCACCCTCATGAATCTGCCTTGCGTTGTTGCGATCCTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: RHAEEHRQKLQRRAS*HPHESALRCCDPVC Trigger: ACACACAGGATCGCAACAACGCAAGGCAGATTCATGAGGGTGCAAGCTTGCCCTTCTTTGAAGTTTTTGTCGATGCTCCTCTGCATGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
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| 3UTR-3UTR CCA 90 bp | GTTGGCCCAGCATACATCATAGGAGACGGGAAAATGGCCACCACTGTCGTTTCAAGAAGACAATCGAAATaGAGGCACTGCAAGTACTCC | + |
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Preference number: 2 (lower is better) Translates to: VGPAYIIGDGKMATTVVSRRQSK*RHCKYS Trigger: GGAGTACTTGCAGTGCCTCCATTTCGATTGTCTTCT...TGAAACGACAGTGGTGGCCATTTTCCCGTCTCCTATGATGTATGCTGGGCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR-3UTR TCA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATGGTGTTACACTAGTTTaGAACAGAACTGAAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: CKRTSTRRAARERGSSLHGVTLV*NRTERQ Trigger: CTGTCTTTCAGTTCTGTTTCAAACTAGTGTAACACC...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029666.14 ENSMUST00000197402.5 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| 3UTR-3UTR GCA 90 bp | CTCACAGACATGCAGAGGAGCATCGACAAAAACTTCAAAGAAGGGCAAGCTTGCCTCATGAATCTGCCTTaGGTTGTTGCGATCCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LTDMQRSIDKNFKEGQACLMNLP*VVAILC Trigger: ACACAGGATCGCAACAACGCAAGGCAGATTCATGAG...GCAAGCTTGCCCTTCTTTGAAGTTTTTGTCGATGCTCCTCTGCATGTCTGTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
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| 3UTR-3UTR CCA 90 bp | ATCCCTCTGCTCACAGACATGCAGAGGAGCATCGACAAAAACTTCAAAGAAGGGTTCTTATTGAGTCCTTaGCGGATGTTGTCACCATCC | + |
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Preference number: 2 (lower is better) Translates to: IPLLTDMQRSIDKNFKEGFLLSP*RMLSPS Trigger: GGATGGTGACAACATCCGCCAAGGACTCAATAAGAA...CCCTTCTTTGAAGTTTTTGTCGATGCTCCTCTGCATGTCTGTGAGCAGAGGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
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| 3UTR-3UTR TCA 90 bp | TTATCCTCGTGCGTAGCTGTCAGAACTATAGGCACCGATAAGTTGATGACGCCTGCATATCCACTTTATTaGTTTTCAGGGCTGGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: LSSCVAVRTIGTDKLMTPAYPLY*FSGLVR Trigger: CCTTACCAGCCCTGAAAATCAATAAAGTGGATATGC...AGGCGTCATCAACTTATCGGTGCCTATAGTTCTGACAGCTACGCACGAGGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR-3UTR CCA 90 bp | CTCATGAATCTGCCTTGCGTTGTTGCGATCCTGTGTGTAAGGCGATATAAAGCTTTCTTATTGAGTCCTTaGCGGATGTTGTCACCATCC | + |
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Preference number: 2 (lower is better) Translates to: LMNLPCVVAILCVRRYKAFLLSP*RMLSPS Trigger: GGATGGTGACAACATCCGCCAAGGACTCAATAAGAA...AGCTTTATATCGCCTTACACACAGGATCGCAACAACGCAAGGCAGATTCATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
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| 3UTR CCA 72 bp | CAGGCCTTGGGGGCCATGAAGCCCTCTGGAGGTTTCTaGCCTTCGCGTGCCAGCTTGCGCATCCTCGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: QALGAMKPSGGF*PSRASLRILVP Trigger: AGGAACGAGGATGCGCAAGCTGGCACGCGAAGGCCAGAAACCTCCAGAGGGCTTCATGGCCCCCAAGGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR-3UTR CAA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCAACAGAGCGTGCCCGTaGTGCACTGGGTTGCGCAAC | + |
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Preference number: 3 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSNRACP*CTGLRN Trigger: GTTGCGCAACCCAGTGCACAACGGGCACGCTCTGTT...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR-3UTR CAA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCGGTGGTTCTTGCATGTaGTTCCCCACTGTCTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSGGSCM*FPTVWH Trigger: GTGCCAGACAGTGGGGAACAACATGCAAGAACCACC...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| 3UTR GCA 72 bp | GAATGCCGTGGCACACCAGGTACTCCTCCAGAGCCATaGTCACGGTCGTCTTCCCTGCTCCGGACAATCCTC | + |
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Preference number: 3 (lower is better) Translates to: ECRGTPGTPPEP*SRSSSLLRTIL Trigger: GAGGATTGTCCGGAGCAGGGAAGACGACCGTGAGCATGGCTCTGGAGGAGTACCTGGTGTGCCACGGCATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
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| 3UTR CCA 72 bp | GTGTCCAGTCAGACAACCGCAGAGAAGGGCTGTCGGTaGCTGCGTGGTCCCCTCTGTTACTCAGCCATGCGT | + |
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Preference number: 3 (lower is better) Translates to: VSSQTTAEKGCR*LRGPLCYSAMR Trigger: ACGCATGGCTGAGTAACAGAGGGGACCACGCAGCCACCGACAGCCCTTCTCTGCGGTTGTCTGACTGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029666.14 ENSMUST00000197402.5 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| 3UTR CCA 72 bp | GCCTGGGGCCATCGTCAGCACTTTGGCACCATGTGTTaGCTCATAGAGGTCCTTCCCTGTCTCCGGATGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AWGHRQHFGTMC*LIEVLPCLRMR Trigger: CCTCATCCGGAGACAGGGAAGGACCTCTATGAGCCAACACATGGTGCCAAAGTGCTGACGATGGCCCCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| 3UTR TCA 72 bp | CCTGAAGAAGCTCCACAACCTGCTGGACGCAGTCGTTaGCGTCACAGGAATCCGTTTTCAGCACCAGCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: PEEAPQPAGRSR*RHRNPFSAPAP Trigger: CGGAGCTGGTGCTGAAAACGGATTCCTGTGACGTCAACGACTGCGTCCAGCAGGTTGTGGAGCTTCTTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| 3UTR TCA 72 bp | CGAAATGGAGGCACTGCAAGTACTCCCTCTCTCTCATaGAGCCGTTCAGAGGAGTCGCCCAACCTTCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RNGGTASTPSLS*SRSEESPNLLP Trigger: TGGCAGAAGGTTGGGCGACTCCTCTGAACGGCTTCATGAGAGAGAGGGAGTACTTGCAGTGCCTCCATTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| 3UTR GCA 72 bp | AACGCGGTGCAGCCGTCCAGCCTCTCCTTATCCTCGTaGGTAGCTGTCAGAACTATAGGCACCGATAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: NAVQPSSLSLSS*VAVRTIGTDKL Trigger: CAACTTATCGGTGCCTATAGTTCTGACAGCTACGCACGAGGATAAGGAGAGGCTGGACGGCTGCACCGCGTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| 3UTR TCA 72 bp | ACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTaGTTTCAGGAAGTGTGTCCAGTCAGACAACCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TDQNQCTRRETA*FQEVCPVRQPQ Trigger: CTGCGGTTGTCTGACTGGACACACTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029666.14 ENSMUST00000197402.5 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| 3UTR GCA 72 bp | CTCAGAATCGATGCCAGTGAAGCCTTTTATCTCCCCTaGCCGCGCCTTCTTGTAGAGGCCTTTGACATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRIDASEAFYLP*PRLLVEAFDIP Trigger: AGGGATGTCAAAGGCCTCTACAAGAAGGCGCGGGCAGGGGAGATAAAAGGCTTCACTGGCATCGATTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| 3UTR CCA 72 bp | AACTCGGAAGGGAACGATTTCCAAGGTAATCAGGCCTaGGGCCATCGTCAGCACTTTGGCACCATGTGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: NSEGNDFQGNQA*GHRQHFGTMCW Trigger: CCAACACATGGTGCCAAAGTGCTGACGATGGCCCCAGGCCTGATTACCTTGGAAATCGTTCCCTTCCGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| 3UTR GCA 72 bp | ACGCCTCCATCCAGAAGACAATCGAAATGGAGGCACTaGAAGTACTCCCTCTCTCTCATGAAGCCGTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TPPSRRQSKWRH*KYSLSLMKPFR Trigger: TCTGAACGGCTTCATGAGAGAGAGGGAGTACTTGCAGTGCCTCCATTTCGATTGTCTTCTGGATGGAGGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| 3UTR GCA 72 bp | GCTCATAGAGGTCCTTCCCTGTCTCCGGATGAGGCATaGCAGCAGGGTCTCGTCCAACAATATAAAAATTGG | + |
|
Preference number: 3 (lower is better) Translates to: AHRGPSLSPDEA*QQGLVQQYKNW Trigger: CCAATTTTTATATTGTTGGACGAGACCCTGCTGGCATGCCTCATCCGGAGACAGGGAAGGACCTCTATGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| 3UTR GCA 72 bp | GGAGTCGCCCAACCTTCTGCCAAAACCTGCACCCACTaGATATCCACTTTATTGATTTTCAGGGCTGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: GVAQPSAKTCTH*ISTLLIFRAGK Trigger: CTTACCAGCCCTGAAAATCAATAAAGTGGATATGCAGTGGGTGCAGGTTTTGGCAGAAGGTTGGGCGACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| 3UTR GCA 72 bp | TCTCATGAAGCCGTTCAGAGGAGTCGCCCAACCTTCTaGCAAAACCTGCACCCACTGCATATCCACTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: SHEAVQRSRPTF*QNLHPLHIHFI Trigger: AATAAAGTGGATATGCAGTGGGTGCAGGTTTTGGCAGAAGGTTGGGCGACTCCTCTGAACGGCTTCATGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCCATCCAGAAGACAATCGAAATGGAGGCACTGCAAGTACTCCCTCTCTCTCAGTTCTTATTGAGTCCTaGGCGGATGTTGTCACCATC | + |
|
Preference number: 3 (lower is better) Translates to: LHPEDNRNGGTASTPSLSVLIES*ADVVTI Trigger: GATGGTGACAACATCCGCCAAGGACTCAATAAGAAC...TGAGAGAGAGGGAGTACTTGCAGTGCCTCCATTTCGATTGTCTTCTGGATGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| 3UTR-3UTR CAA 90 bp | GTTGGCCCAGCATACATCATAGGAGACGGGAAAATGGCCACCACTGTCGTTTCAAATCAGCCAATCCCCTaGTTCCAGAACCATCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: VGPAYIIGDGKMATTVVSNQPIP*FQNHLD Trigger: ATCAAGATGGTTCTGGAACAAGGGGATTGGCTGATT...TGAAACGACAGTGGTGGCCATTTTCCCGTCTCCTATGATGTATGCTGGGCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| 3UTR TCA 72 bp | AACAGAGCGTGCCCGTTGTGCACTGGGTTGCGCAACTaGAATGCAAAGACAGCATCAGCGTTCATATCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: NRACPLCTGLRN*NAKTASAFISL Trigger: TAAAGATATGAACGCTGATGCTGTCTTTGCATTTCAGTTGCGCAACCCAGTGCACAACGGGCACGCTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| 3UTR GCA 72 bp | AGGAGCATCGACAAAAACTTCAAAGAAGGGCAAGCTTaGACCCTCATGAATCTGCCTTGCGTTGTTGCGATC | + |
|
Preference number: 3 (lower is better) Translates to: RSIDKNFKEGQA*TLMNLPCVVAI Trigger: GATCGCAACAACGCAAGGCAGATTCATGAGGGTGCAAGCTTGCCCTTCTTTGAAGTTTTTGTCGATGCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
||
| 3UTR CCA 72 bp | AAGTTGATGACGCCTCCATCCAGAAGACAATCGAAATaGAGGCACTGCAAGTACTCCCTCTCTCTCATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KLMTPPSRRQSK*RHCKYSLSLMK Trigger: CTTCATGAGAGAGAGGGAGTACTTGCAGTGCCTCCATTTCGATTGTCTTCTGGATGGAGGCGTCATCAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| 3UTR GCA 72 bp | AAAGAAGGGCAAGCTTGCACCCTCATGAATCTGCCTTaGGTTGTTGCGATCCTGTGTGTAAGGCGATATAAA | + |
|
Preference number: 3 (lower is better) Translates to: KEGQACTLMNLP*VVAILCVRRYK Trigger: TTTATATCGCCTTACACACAGGATCGCAACAACGCAAGGCAGATTCATGAGGGTGCAAGCTTGCCCTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
||
| CDS-3UTR GCA 90 bp | GTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCACCACCATCCGCGCCCTaGAGTGCCACTGGACCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VVPSVTQPCVPGRVPSSAPPSAP*SATGPR Trigger: CCGAGGTCCAGTGGCACTGCAGGGCGCGGATGGTGG...TGCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCCAGGATTCCGAAGGATaGCCACGCGGCGGCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSQDSEG*PRGGPH Trigger: ATGAGGGCCGCCGCGTGGCCATCCTTCGGAATCCTG...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR TCA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCTTCCCTGTCTCCGGATaGGGCATGCCAGCAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSFPVSG*GMPAGS Trigger: AGACCCTGCTGGCATGCCTCATCCGGAGACAGGGAA...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | GTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCACAGCCACCAAGAGGATaGAGGAGCAGGACAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VVPSVTQPCVPGRVPSSAQPPRG*RSRTGR Trigger: GCGCCCTGTCCTGCTCCTCCATCCTCTTGGTGGCTG...TGCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR TCA 90 bp | GTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCAAGGCCTTGGGGGCCATaGAGCCCTCTGGAGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVPSVTQPCVPGRVPSSARPWGP*SPLEVS Trigger: AGAAACCTCCAGAGGGCTTCATGGCCCCCAAGGCCT...TGCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | GTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCAGCCCTCCTCCAGCACTaGAGCGTGCTGCTTCATACG | + |
|
Preference number: 4 (lower is better) Translates to: VVPSVTQPCVPGRVPSSAALLQH*SVLLHT Trigger: CGTATGAAGCAGCACGCTGCAGTGCTGGAGGAGGGC...TGCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCTCTCCGGATGAGGCATaGCAGCAGGGTCTCGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSSPDEA*QQGLVQ Trigger: TTGGACGAGACCCTGCTGGCATGCCTCATCCGGAGA...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR TCA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCGGTGGGCTTGATAGGTaGCGTTGGTTGCTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSGGLDR*RWLLSA Trigger: TGCAGAGAGCAACCAACGTCACCTATCAAGCCCACC...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029666.14 ENSMUST00000197402.5 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | GTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCATCTCCGGATGAGGCATaGCAGCAGGGTCTCGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VVPSVTQPCVPGRVPSSASPDEA*QQGLVQ Trigger: TTGGACGAGACCCTGCTGGCATGCCTCATCCGGAGA...TGCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCTTGTTCCCCACTGTCTaGCACACCGCTCCTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSLFPTV*HTAPLS Trigger: GGAAAGAGGAGCGGTGTGCCAGACAGTGGGGAACAA...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR TCA 90 bp | GTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCAACTCCCTCTCTCTCATaGAGCCGTTCAGAGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VVPSVTQPCVPGRVPSSATPSLS*SRSEES Trigger: CGACTCCTCTGAACGGCTTCATGAGAGAGAGGGAGT...TGCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR TCA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCATCCGGTCCAGGACTTaGAGATCTCCTCCAATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSIRSRT*RSPPIS Trigger: GCTGATTGGAGGAGATCTTCAAGTCCTGGACCGGAT...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCCCCCTCTCCAGAAGCTaGTTGTGGGTATCCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSPLSRS*LWVSCI Trigger: AATGCAGGATACCCACAAGCAGCTTCTGGAGAGGGG...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATCCACCATCCGCGCCCTaGAGTGCCACTGGACCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CKRTSTRRAARERGSSLHPPSAP*SATGPR Trigger: CCGAGGTCCAGTGGCACTGCAGGGCGCGGATGGTGG...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| 3UTR CAA 72 bp | GGCCTGGGGCCATCGTCAGCACTTTGGCACCATGTGTaGGCTCATAGAGGTCCTTCCCTGTCTCCGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLGPSSALWHHV*AHRGPSLSPDE Trigger: CTCATCCGGAGACAGGGAAGGACCTCTATGAGCCAACACATGGTGCCAAAGTGCTGACGATGGCCCCAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| CDS-3UTR TCA 90 bp | GTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCAGGGGTAAGGCGGTACTaGTCAAGACCATCATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVPSVTQPCVPGRVPSSAGVRRY*SRPSFQ Trigger: CTGGAATGATGGTCTTGATCAGTACCGCCTTACCCC...TGCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCCCTTCTGCCAAAACCTaGACCCACTGCATATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSPSAKT*THCIST Trigger: AGTGGATATGCAGTGGGTGCAGGTTTTGGCAGAAGG...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | GAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGCCACCATCCGCGCCCTaGAGTGCCACTGGACCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ERQTKTNARGGKRPDFRKPPSAP*SATGPR Trigger: CCGAGGTCCAGTGGCACTGCAGGGCGCGGATGGTGG...CTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | ACACAGATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCACAGGATTCCGAAGGATaGCCACGCGGCGGCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQIAREPQHVGLQGRGGAQDSEG*PRGGPH Trigger: ATGAGGGCCGCCGCGTGGCCATCCTTCGGAATCCTG...TGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATCTGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR TCA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCACTGGGTTGCGCAACTaGAATGCAAAGACAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSTGLRN*NAKTAS Trigger: TGATGCTGTCTTTGCATTTCAGTTGCGCAACCCAGT...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCCTCTGCTCACAGACATaGAGAGGAGCATCGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSLCSQT*RGASTK Trigger: TTTTGTCGATGCTCCTCTGCATGTCTGTGAGCAGAG...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGACCAGAGCGAACGCGGTaGAGCCGTCCAGCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKDRPKPMHAEGNGLISGPERTR*SRPASP Trigger: AGGAGAGGCTGGACGGCTGCACCGCGTTCGCTCTGG...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | GATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACAGGATTCCGAAGGATaGCCACGCGGCGGCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DCKRTSTRRAARERGSSLQDSEG*PRGGPH Trigger: ATGAGGGCCGCCGCGTGGCCATCCTTCGGAATCCTG...TAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATCAGCCACCAAGAGGATaGAGGAGCAGGACAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: CKRTSTRRAARERGSSLHQPPRG*RSRTGR Trigger: GCGCCCTGTCCTGCTCCTCCATCCTCTTGGTGGCTG...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | GTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCACCATCGTCAGCACTTTaGCACCATGTGTTGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VVPSVTQPCVPGRVPSSAPSSAL*HHVLAH Trigger: ATGAGCCAACACATGGTGCCAAAGTGCTGACGATGG...TGCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR TCA 90 bp | GACGTCACAGGAATCCGTTTTCAGCACCAGCTCCGGGGCCTCGGGTTTCTCATAGGTGGGCTTGATAGGTaGCGTTGGTTGCTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DVTGIRFQHQLRGLGFLIGGLDR*RWLLSA Trigger: TGCAGAGAGCAACCAACGTCACCTATCAAGCCCACC...TATGAGAAACCCGAGGCCCCGGAGCTGGTGCTGAAAACGGATTCCTGTGACGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| CDS-3UTR TCA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTCCCTGTCTCCGGATaGGGCATGCCAGCAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CKRTSTRRAARERGSSLHFPVSG*GMPAGS Trigger: AGACCCTGCTGGCATGCCTCATCCGGAGACAGGGAA...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTCCAGAGCGAACGCGGTaGAGCCGTCCAGCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRTSTRRAARERGSSLHFPERTR*SRPASP Trigger: AGGAGAGGCTGGACGGCTGCACCGCGTTCGCTCTGG...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | GATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTAGCCCTCCTCCAGCACTaGAGCGTGCTGCTTCATACG | + |
|
Preference number: 4 (lower is better) Translates to: DCKRTSTRRAARERGSSLALLQH*SVLLHT Trigger: CGTATGAAGCAGCACGCTGCAGTGCTGGAGGAGGGC...TAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATGCCCTCCTCCAGCACTaGAGCGTGCTGCTTCATACG | + |
|
Preference number: 4 (lower is better) Translates to: CKRTSTRRAARERGSSLHALLQH*SVLLHT Trigger: CGTATGAAGCAGCACGCTGCAGTGCTGGAGGAGGGC...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCTTCTTATTGAGTCCTTaGCGGATGTTGTCACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSFLLSP*RMLSPS Trigger: GGATGGTGACAACATCCGCCAAGGACTCAATAAGAA...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCAGAAGACAATCGAAATaGAGGCACTGCAAGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSRRQSK*RHCKYS Trigger: GGAGTACTTGCAGTGCCTCCATTTCGATTGTCTTCT...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGACAGCCACCAAGAGGATaGAGGAGCAGGACAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LKDRPKPMHAEGNGLISGQPPRG*RSRTGR Trigger: GCGCCCTGTCCTGCTCCTCCATCCTCTTGGTGGCTG...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| CDS-3UTR GCA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATACTCCTCCAGAGCCATaGTCACGGTCGTCTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CKRTSTRRAARERGSSLHTPPEP*SRSSSL Trigger: CAGGGAAGACGACCGTGAGCATGGCTCTGGAGGAGT...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | ACACAGATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCATTTCAGGATCCAGGATaGCCTCCTCCAGCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQIAREPQHVGLQGRGGAFQDPG*PPPALQ Trigger: CTGCAGTGCTGGAGGAGGGCATCCTGGATCCTGAAA...TGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATCTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | GATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTATCTCCGGATGAGGCATaGCAGCAGGGTCTCGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DCKRTSTRRAARERGSSLSPDEA*QQGLVQ Trigger: TTGGACGAGACCCTGCTGGCATGCCTCATCCGGAGA...TAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | GTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCATTCTTATTGAGTCCTTaGCGGATGTTGTCACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VVPSVTQPCVPGRVPSSAFLLSP*RMLSPS Trigger: GGATGGTGACAACATCCGCCAAGGACTCAATAAGAA...TGCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | ACACAGATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCATTGTTCCCCACTGTCTaGCACACCGCTCCTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQIAREPQHVGLQGRGGALFPTV*HTAPLS Trigger: GGAAAGAGGAGCGGTGTGCCAGACAGTGGGGAACAA...TGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATCTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | GTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCATCCAGAAGCTGCTTGTaGGTATCCTGCATTAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVPSVTQPCVPGRVPSSASRSCL*VSCINR Trigger: TCTGTTAATGCAGGATACCCACAAGCAGCTTCTGGA...TGCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR TCA 90 bp | GATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTAGGTGGGCTTGATAGGTaGCGTTGGTTGCTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DCKRTSTRRAARERGSSLGGLDR*RWLLSA Trigger: TGCAGAGAGCAACCAACGTCACCTATCAAGCCCACC...TAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029666.14 ENSMUST00000197402.5 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR TCA 90 bp | ACACAGATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAATCCGGTCCAGGACTTaGAGATCTCCTCCAATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQIAREPQHVGLQGRGGAIRSRT*RSPPIS Trigger: GCTGATTGGAGGAGATCTTCAAGTCCTGGACCGGAT...TGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATCTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| CDS-3UTR TCA 90 bp | AGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTTTTCCCTGTCTCCGGATaGGGCATGCCAGCAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: REPQHVGLQGRGGAVYIFFPVSG*GMPAGS Trigger: AGACCCTGCTGGCATGCCTCATCCGGAGACAGGGAA...AAAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCT 54% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR TCA 90 bp | AGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTTAGGCCTTGGGGGCCATaGAGCCCTCTGGAGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: REPQHVGLQGRGGAVYIFRPWGP*SPLEVS Trigger: AGAAACCTCCAGAGGGCTTCATGGCCCCCAAGGCCT...AAAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | GAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGACGTTGGTTGCTCTCTaGATCCCCCAGTTCTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: ERQTKTNARGGKRPDFRKTLVAL*IPQFCA Trigger: CGCGCAGAACTGGGGGATGCAGAGAGCAACCAACGT...CTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029666.14 |
||
| CDS-3UTR GCA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATCTGTCAGCCAAACTGTaGAACCACGGAAGCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: CKRTSTRRAARERGSSLHLSAKL*NHGSHL Trigger: GAGGTGGCTTCCGTGGTTGCACAGTTTGGCTGACAG...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029666.14 ENSMUST00000197402.5 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| CDS-3UTR GCA 90 bp | GATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTAAGTCGCCCAACCTTCTaGCAAAACCTGCACCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: DCKRTSTRRAARERGSSLSRPTF*QNLHPL Trigger: CAGTGGGTGCAGGTTTTGGCAGAAGGTTGGGCGACT...TAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATAGTCGCCCAACCTTCTaGCAAAACCTGCACCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CKRTSTRRAARERGSSLHSRPTF*QNLHPL Trigger: CAGTGGGTGCAGGTTTTGGCAGAAGGTTGGGCGACT...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | ACACAGATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAAGCACTGCAGCGTGCTaGTTCATACGCCACATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQIAREPQHVGLQGRGGASTAAC*FIRHIR Trigger: TCTGATGTGGCGTATGAAGCAGCACGCTGCAGTGCT...TGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATCTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | ACACAGATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCACAAGGTAATCAGGCCTaGGGCCATCGTCAGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TQIAREPQHVGLQGRGGAQGNQA*GHRQHF Trigger: AAAGTGCTGACGATGGCCCCAGGCCTGATTACCTTG...TGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATCTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| 3UTR CAA 72 bp | AAGCCCTCTGGAGGTTTCTGGCCTTCGCGTGCCAGCTaGCGCATCCTCGTTCCTGAAATAAACTCGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPSGGFWPSRAS*RILVPEINSKS Trigger: AGACTTCGAGTTTATTTCAGGAACGAGGATGCGCAAGCTGGCACGCGAAGGCCAGAAACCTCCAGAGGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
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| CDS-3UTR TCA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAACTCCCTCTCTCTCATaGAGCCGTTCAGAGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LKDRPKPMHAEGNGLISGTPSLS*SRSEES Trigger: CGACTCCTCTGAACGGCTTCATGAGAGAGAGGGAGT...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| CDS-3UTR TCA 90 bp | GATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTAATCCGGTCCAGGACTTaGAGATCTCCTCCAATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DCKRTSTRRAARERGSSLIRSRT*RSPPIS Trigger: GCTGATTGGAGGAGATCTTCAAGTCCTGGACCGGAT...TAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| CDS-3UTR GCA 90 bp | AGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTTACTCCTCCAGAGCCATaGTCACGGTCGTCTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: REPQHVGLQGRGGAVYIFTPPEP*SRSSSL Trigger: CAGGGAAGACGACCGTGAGCATGGCTCTGGAGGAGT...AAAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGATCCAGCACTGCAGCGTaGTGCTTCATACGCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: LKDRPKPMHAEGNGLISGSSTAA*CFIRHI Trigger: GATGTGGCGTATGAAGCAGCACGCTGCAGTGCTGGA...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGATTTCAGGATCCAGGATaGCCTCCTCCAGCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKDRPKPMHAEGNGLISGFQDPG*PPPALQ Trigger: CTGCAGTGCTGGAGGAGGGCATCCTGGATCCTGAAA...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| CDS-3UTR CCA 90 bp | GAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGTTGTTCCCCACTGTCTaGCACACCGCTCCTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERQTKTNARGGKRPDFRKLFPTV*HTAPLS Trigger: GGAAAGAGGAGCGGTGTGCCAGACAGTGGGGAACAA...CTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| 3UTR CAA 72 bp | GTCCTCAGGACTGAAGCCGAGGTTCTTATTGAGTCCTaGGCGGATGTTGTCACCATCCAAAGTGTAGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: VLRTEAEVLIES*ADVVTIQSVAR Trigger: CCGTGCTACACTTTGGATGGTGACAACATCCGCCAAGGACTCAATAAGAACCTCGGCTTCAGTCCTGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
||
| CDS-3UTR TCA 90 bp | AGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTTACTCCCTCTCTCTCATaGAGCCGTTCAGAGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: REPQHVGLQGRGGAVYIFTPSLS*SRSEES Trigger: CGACTCCTCTGAACGGCTTCATGAGAGAGAGGGAGT...AAAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR TCA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAGGGGTAAGGCGGTACTaGTCAAGACCATCATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKDRPKPMHAEGNGLISGGVRRY*SRPSFQ Trigger: CTGGAATGATGGTCTTGATCAGTACCGCCTTACCCC...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | GATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACCTTCTGCCAAAACCTaGACCCACTGCATATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DCKRTSTRRAARERGSSLPSAKT*THCIST Trigger: AGTGGATATGCAGTGGGTGCAGGTTTTGGCAGAAGG...TAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTAGTCGCCCAACCTTCTaGCAAAACCTGCACCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KRTSTRRAARERGSSLHFSRPTF*QNLHPL Trigger: CAGTGGGTGCAGGTTTTGGCAGAAGGTTGGGCGACT...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTGTAGGGGTGGTTCTTaGATGTTGTTCCCCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CKRTSTRRAARERGSSLHCRGGS*MLFPTV Trigger: GACAGTGGGGAACAACATGCAAGAACCACCCCTACA...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | GAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGTGCATTAACAGAGCGTaGCCGTTGTGCACTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ERQTKTNARGGKRPDFRKCINRA*PLCTGL Trigger: CAACCCAGTGCACAACGGGCACGCTCTGTTAATGCA...CTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGATGCATTAACAGAGCGTaGCCGTTGTGCACTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKDRPKPMHAEGNGLISGCINRA*PLCTGL Trigger: CAACCCAGTGCACAACGGGCACGCTCTGTTAATGCA...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGCACTGCAGCGTGCTaGTTCATACGCCACATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKDRPKPMHAEGNGLISGSTAAC*FIRHIR Trigger: TCTGATGTGGCGTATGAAGCAGCACGCTGCAGTGCT...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTTCCAGCACTGCAGCGTaGTGCTTCATACGCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: KRTSTRRAARERGSSLHFSSTAA*CFIRHI Trigger: GATGTGGCGTATGAAGCAGCACGCTGCAGTGCTGGA...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTTTTCAGGATCCAGGATaGCCTCCTCCAGCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRTSTRRAARERGSSLHFFQDPG*PPPALQ Trigger: CTGCAGTGCTGGAGGAGGGCATCCTGGATCCTGAAA...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 52% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTCCACTGGACCTCGGTTaGCCCAGCATACATCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRTSTRRAARERGSSLHFPLDLG*PSIHHR Trigger: CCTATGATGTATGCTGGGCCAACCGAGGTCCAGTGG...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | AGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTTCCACTGGACCTCGGTTaGCCCAGCATACATCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: REPQHVGLQGRGGAVYIFPLDLG*PSIHHR Trigger: CCTATGATGTATGCTGGGCCAACCGAGGTCCAGTGG...AAAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | GAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGCAAGGTAATCAGGCCTaGGGCCATCGTCAGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ERQTKTNARGGKRPDFRKQGNQA*GHRQHF Trigger: AAAGTGCTGACGATGGCCCCAGGCCTGATTACCTTG...CTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR TCA 90 bp | GAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGTCTTGTAGAGGCCTTTaGCATCCCTCTGCTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ERQTKTNARGGKRPDFRKSCRGL*HPSAHR Trigger: TCTGTGAGCAGAGGGATGTCAAAGGCCTCTACAAGA...CTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | AGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTTTGCATCCCCCAGTTCTaGGCGTTATTGCTCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: REPQHVGLQGRGGAVYIFCIPQF*ALLLSL Trigger: CAAGCTGAGCAATAACGCGCAGAACTGGGGGATGCA...AAAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029666.14 |
||
| CDS-3UTR GCA 90 bp | CTCACAGACATGCAGAGGAGCATCGACAAAAACTTCAAAGAAGGGCAAGCTTGCCTGTCAGCCAAACTGTaGAACCACGGAAGCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTDMQRSIDKNFKEGQACLSAKL*NHGSHL Trigger: GAGGTGGCTTCCGTGGTTGCACAGTTTGGCTGACAG...GCAAGCTTGCCCTTCTTTGAAGTTTTTGTCGATGCTCCTCTGCATGTCTGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
||
| CDS-3UTR GCA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATCTCTGCTCACAGACATaGAGAGGAGCATCGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CKRTSTRRAARERGSSLHLCSQT*RGASTK Trigger: TTTTGTCGATGCTCCTCTGCATGTCTGTGAGCAGAG...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | GATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACTCTGCTCACAGACATaGAGAGGAGCATCGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DCKRTSTRRAARERGSSLLCSQT*RGASTK Trigger: TTTTGTCGATGCTCCTCTGCATGTCTGTGAGCAGAG...TAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | GAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGTGTAGGGGTGGTTCTTaGATGTTGTTCCCCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ERQTKTNARGGKRPDFRKCRGGS*MLFPTV Trigger: GACAGTGGGGAACAACATGCAAGAACCACCCCTACA...CTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | GATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACGTTGTGCACTGGGTTaGGCAACTGAAATGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DCKRTSTRRAARERGSSLRCALG*ATEMQR Trigger: TCTTTGCATTTCAGTTGCGCAACCCAGTGCACAACG...TAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTTGCATTAACAGAGCGTaGCCGTTGTGCACTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRTSTRRAARERGSSLHFCINRA*PLCTGL Trigger: CAACCCAGTGCACAACGGGCACGCTCTGTTAATGCA...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTCCCCTCTCCAGAAGCTaGTTGTGGGTATCCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: KRTSTRRAARERGSSLHFPLSRS*LWVSCI Trigger: AATGCAGGATACCCACAAGCAGCTTCTGGAGAGGGG...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTAGCACTGCAGCGTGCTaGTTCATACGCCACATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRTSTRRAARERGSSLHFSTAAC*FIRHIR Trigger: TCTGATGTGGCGTATGAAGCAGCACGCTGCAGTGCT...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGATTTGGCACCATGTGTTaGCTCATAGAGGTCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LKDRPKPMHAEGNGLISGFGTMC*LIEVLP Trigger: GGGAAGGACCTCTATGAGCCAACACATGGTGCCAAA...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR TCA 90 bp | GACAAAAACTTCAAAGAAGGGCAAGCTTGCACCCTCATGAATCTGCCTTGCGTTGGTGGGCTTGATAGGTaGCGTTGGTTGCTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DKNFKEGQACTLMNLPCVGGLDR*RWLLSA Trigger: TGCAGAGAGCAACCAACGTCACCTATCAAGCCCACC...AACGCAAGGCAGATTCATGAGGGTGCAAGCTTGCCCTTCTTTGAAGTTTTTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
||
| CDS-3UTR TCA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAACTGGGTTGCGCAACTaGAATGCAAAGACAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LKDRPKPMHAEGNGLISGTGLRN*NAKTAS Trigger: TGATGCTGTCTTTGCATTTCAGTTGCGCAACCCAGT...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | AGCATCGACAAAAACTTCAAAGAAGGGCAAGCTTGCACCCTCATGAATCTGCCTCTGTCAGCCAAACTGTaGAACCACGGAAGCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIDKNFKEGQACTLMNLPLSAKL*NHGSHL Trigger: GAGGTGGCTTCCGTGGTTGCACAGTTTGGCTGACAG...AGGCAGATTCATGAGGGTGCAAGCTTGCCCTTCTTTGAAGTTTTTGTCGATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
||
| CDS-3UTR GCA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGACTCATGAATCTGCCTTaGGTTGTTGCGATCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKDRPKPMHAEGNGLISGLMNLP*VVAILC Trigger: ACACAGGATCGCAACAACGCAAGGCAGATTCATGAG...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTCCTTCTGCCAAAACCTaGACCCACTGCATATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KRTSTRRAARERGSSLHFPSAKT*THCIST Trigger: AGTGGATATGCAGTGGGTGCAGGTTTTGGCAGAAGG...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTTCGAAATGGAGGCACTaGAAGTACTCCCTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRTSTRRAARERGSSLHFSKWRH*KYSLSL Trigger: GAGAGAGAGGGAGTACTTGCAGTGCCTCCATTTCGA...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATCTCTCCTTATCCTCGTaGGTAGCTGTCAGAACTATA | + |
|
Preference number: 4 (lower is better) Translates to: CKRTSTRRAARERGSSLHLSLSS*VAVRTI Trigger: TATAGTTCTGACAGCTACGCACGAGGATAAGGAGAG...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | ACACAGATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAATATCTTTAAACTTCTaGTTGAGCTCCGTCGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TQIAREPQHVGLQGRGGAISLNF*LSSVGV Trigger: TACCCCGACGGAGCTCAAGCAGAAGTTTAAAGATAT...TGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATCTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | ACACAGATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCATTTCTTGTTGTAAGCTaGAACTCGGAAGGGAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: TQIAREPQHVGLQGRGGAFLVVS*NSEGND Trigger: ATCGTTCCCTTCCGAGTTGCAGCTTACAACAAGAAA...TGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATCTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTCCATCGTCAGCACTTTaGCACCATGTGTTGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KRTSTRRAARERGSSLHFPSSAL*HHVLAH Trigger: ATGAGCCAACACATGGTGCCAAAGTGCTGACGATGG...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| 3UTR CAA 72 bp | TCTTCTCTGTCCTCAGGACTGAAGCCGAGGTTCTTATaGAGTCCTTGGCGGATGTTGTCACCATCCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLSSGLKPRFL*SPWRMLSPSKV Trigger: CACTTTGGATGGTGACAACATCCGCCAAGGACTCAATAAGAACCTCGGCTTCAGTCCTGAGGACAGAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
||
| CDS-3UTR TCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTCGTTATTGCTCAGCTTaGCTTTCTTGCACAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRTSTRRAARERGSSLHFRYCSA*LSCTDS Trigger: GGAGTCTGTGCAAGAAAGTCAAGCTGAGCAATAACG...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029666.14 |
||
| CDS-3UTR TCA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATGCATATCCACTTTATTaGTTTTCAGGGCTGGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CKRTSTRRAARERGSSLHAYPLY*FSGLVR Trigger: CCTTACCAGCCCTGAAAATCAATAAAGTGGATATGC...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGACTCTCCTTATCCTCGTaGGTAGCTGTCAGAACTATA | + |
|
Preference number: 4 (lower is better) Translates to: LKDRPKPMHAEGNGLISGLSLSS*VAVRTI Trigger: TATAGTTCTGACAGCTACGCACGAGGATAAGGAGAG...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | ACAATAAGTGGAAAAGATACATTAGAGCCAGCGTGGTGTTACACTAGTTTGAAACCAGAGCGAACGCGGTaGAGCCGTCCAGCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TISGKDTLEPAWCYTSLKPERTR*SRPASP Trigger: AGGAGAGGCTGGACGGCTGCACCGCGTTCGCTCTGG...TTTCAAACTAGTGTAACACCACGCTGGCTCTAATGTATCTTTTCCACTTATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAGTTGCGCAACTGAAATaGAAAGACAGCATCAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKDRPKPMHAEGNGLISGVAQLK*KDSISV Trigger: AACGCTGATGCTGTCTTTGCATTTCAGTTGCGCAAC...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | AGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTTCGTTGTGCACTGGGTTaGGCAACTGAAATGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: REPQHVGLQGRGGAVYIFRCALG*ATEMQR Trigger: TCTTTGCATTTCAGTTGCGCAACCCAGTGCACAACG...AAAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | GAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGTCCAGAAGCTGCTTGTaGGTATCCTGCATTAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ERQTKTNARGGKRPDFRKSRSCL*VSCINR Trigger: TCTGTTAATGCAGGATACCCACAAGCAGCTTCTGGA...CTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| 3UTR CAA 72 bp | TCGTGCGTAGCTGTCAGAACTATAGGCACCGATAAGTaGATGACGCCTCCATCCAGAAGACAATCGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SCVAVRTIGTDK*MTPPSRRQSKW Trigger: CCATTTCGATTGTCTTCTGGATGGAGGCGTCATCAACTTATCGGTGCCTATAGTTCTGACAGCTACGCACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| 3UTR CAA 72 bp | CAGGACTTGAAGATCTCCTCCAATCAGCCAATCCCCTaGTTCCAGAACCATCTTGATGTAGGGGTGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QDLKISSNQPIP*FQNHLDVGVVL Trigger: AAGAACCACCCCTACATCAAGATGGTTCTGGAACAAGGGGATTGGCTGATTGGAGGAGATCTTCAAGTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| CDS-3UTR TCA 90 bp | GAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGGCATATCCACTTTATTaGTTTTCAGGGCTGGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERQTKTNARGGKRPDFRKAYPLY*FSGLVR Trigger: CCTTACCAGCCCTGAAAATCAATAAAGTGGATATGC...CTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | ACACAGATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAAAAACCTGCACCCACTaGATATCCACTTTATTGATT | + |
|
Preference number: 4 (lower is better) Translates to: TQIAREPQHVGLQGRGGAKTCTH*ISTLLI Trigger: AATCAATAAAGTGGATATGCAGTGGGTGCAGGTTTT...TGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATCTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTGTTGCGCAACTGAAATaGAAAGACAGCATCAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRTSTRRAARERGSSLHFVAQLK*KDSISV Trigger: AACGCTGATGCTGTCTTTGCATTTCAGTTGCGCAAC...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | GAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGTTTCTTGTTGTAAGCTaGAACTCGGAAGGGAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: ERQTKTNARGGKRPDFRKFLVVS*NSEGND Trigger: ATCGTTCCCTTCCGAGTTGCAGCTTACAACAAGAAA...CTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTAGAAGACAATCGAAATaGAGGCACTGCAAGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRTSTRRAARERGSSLHFRRQSK*RHCKYS Trigger: GGAGTACTTGCAGTGCCTCCATTTCGATTGTCTTCT...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | AGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTTAGAAGACAATCGAAATaGAGGCACTGCAAGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: REPQHVGLQGRGGAVYIFRRQSK*RHCKYS Trigger: GGAGTACTTGCAGTGCCTCCATTTCGATTGTCTTCT...AAAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTTCCAGAAGCTGCTTGTaGGTATCCTGCATTAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRTSTRRAARERGSSLHFSRSCL*VSCINR Trigger: TCTGTTAATGCAGGATACCCACAAGCAGCTTCTGGA...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR TCA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTGCATATCCACTTTATTaGTTTTCAGGGCTGGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRTSTRRAARERGSSLHFAYPLY*FSGLVR Trigger: CCTTACCAGCCCTGAAAATCAATAAAGTGGATATGC...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR TCA 90 bp | ACAATAAGTGGAAAAGATACATTAGAGCCAGCGTGGTGTTACACTAGTTTGAAAAGGCCTTGGGGGCCATaGAGCCCTCTGGAGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TISGKDTLEPAWCYTSLKRPWGP*SPLEVS Trigger: AGAAACCTCCAGAGGGCTTCATGGCCCCCAAGGCCT...TTTCAAACTAGTGTAACACCACGCTGGCTCTAATGTATCTTTTCCACTTATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATAAAACCTGCACCCACTaGATATCCACTTTATTGATT | + |
|
Preference number: 4 (lower is better) Translates to: CKRTSTRRAARERGSSLHKTCTH*ISTLLI Trigger: AATCAATAAAGTGGATATGCAGTGGGTGCAGGTTTT...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| 3UTR CAA 72 bp | TCTGCCAAAACCTGCACCCACTGCATATCCACTTTATaGATTTTCAGGGCTGGTAAGGCTTCTGCATCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SAKTCTHCISTL*IFRAGKASASV Trigger: AACTGATGCAGAAGCCTTACCAGCCCTGAAAATCAATAAAGTGGATATGCAGTGGGTGCAGGTTTTGGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| CDS-3UTR TCA 90 bp | ACAATAAGTGGAAAAGATACATTAGAGCCAGCGTGGTGTTACACTAGTTTGAAAGGGGTAAGGCGGTACTaGTCAAGACCATCATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TISGKDTLEPAWCYTSLKGVRRY*SRPSFQ Trigger: CTGGAATGATGGTCTTGATCAGTACCGCCTTACCCC...TTTCAAACTAGTGTAACACCACGCTGGCTCTAATGTATCTTTTCCACTTATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | ACAATAAGTGGAAAAGATACATTAGAGCCAGCGTGGTGTTACACTAGTTTGAAACCCCTCTCCAGAAGCTaGTTGTGGGTATCCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: TISGKDTLEPAWCYTSLKPLSRS*LWVSCI Trigger: AATGCAGGATACCCACAAGCAGCTTCTGGAGAGGGG...TTTCAAACTAGTGTAACACCACGCTGGCTCTAATGTATCTTTTCCACTTATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | ACAATAAGTGGAAAAGATACATTAGAGCCAGCGTGGTGTTACACTAGTTTGAAACAAGGTAATCAGGCCTaGGGCCATCGTCAGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TISGKDTLEPAWCYTSLKQGNQA*GHRQHF Trigger: AAAGTGCTGACGATGGCCCCAGGCCTGATTACCTTG...TTTCAAACTAGTGTAACACCACGCTGGCTCTAATGTATCTTTTCCACTTATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR TCA 90 bp | ACAATAAGTGGAAAAGATACATTAGAGCCAGCGTGGTGTTACACTAGTTTGAAATCTTGTAGAGGCCTTTaGCATCCCTCTGCTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TISGKDTLEPAWCYTSLKSCRGL*HPSAHR Trigger: TCTGTGAGCAGAGGGATGTCAAAGGCCTCTACAAGA...TTTCAAACTAGTGTAACACCACGCTGGCTCTAATGTATCTTTTCCACTTATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | ACAATAAGTGGAAAAGATACATTAGAGCCAGCGTGGTGTTACACTAGTTTGAAATTTGGCACCATGTGTTaGCTCATAGAGGTCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TISGKDTLEPAWCYTSLKFGTMC*LIEVLP Trigger: GGGAAGGACCTCTATGAGCCAACACATGGTGCCAAA...TTTCAAACTAGTGTAACACCACGCTGGCTCTAATGTATCTTTTCCACTTATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CCA 90 bp | ACAATAAGTGGAAAAGATACATTAGAGCCAGCGTGGTGTTACACTAGTTTGAAACCATCGTCAGCACTTTaGCACCATGTGTTGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TISGKDTLEPAWCYTSLKPSSAL*HHVLAH Trigger: ATGAGCCAACACATGGTGCCAAAGTGCTGACGATGG...TTTCAAACTAGTGTAACACCACGCTGGCTCTAATGTATCTTTTCCACTTATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | ACAATAAGTGGAAAAGATACATTAGAGCCAGCGTGGTGTTACACTAGTTTGAAACTCATGAATCTGCCTTaGGTTGTTGCGATCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TISGKDTLEPAWCYTSLKLMNLP*VVAILC Trigger: ACACAGGATCGCAACAACGCAAGGCAGATTCATGAG...TTTCAAACTAGTGTAACACCACGCTGGCTCTAATGTATCTTTTCCACTTATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | ACAATAAGTGGAAAAGATACATTAGAGCCAGCGTGGTGTTACACTAGTTTGAAAGTTGCGCAACTGAAATaGAAAGACAGCATCAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TISGKDTLEPAWCYTSLKVAQLK*KDSISV Trigger: AACGCTGATGCTGTCTTTGCATTTCAGTTGCGCAAC...TTTCAAACTAGTGTAACACCACGCTGGCTCTAATGTATCTTTTCCACTTATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR GCA 90 bp | ACAATAAGTGGAAAAGATACATTAGAGCCAGCGTGGTGTTACACTAGTTTGAAAATATCTTTAAACTTCTaGTTGAGCTCCGTCGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TISGKDTLEPAWCYTSLKISLNF*LSSVGV Trigger: TACCCCGACGGAGCTCAAGCAGAAGTTTAAAGATAT...TTTCAAACTAGTGTAACACCACGCTGGCTCTAATGTATCTTTTCCACTTATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCAGCACAGTCCAGGCCTaGGGGGCCATGAAGCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSSTVQA*GAMKPS Trigger: AGAGGGCTTCATGGCCCCCAAGGCCTGGACTGTGCT...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | GTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCAAGCACAGTCCAGGCCTaGGGGGCCATGAAGCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VVPSVTQPCVPGRVPSSASTVQA*GAMKPS Trigger: AGAGGGCTTCATGGCCCCCAAGGCCTGGACTGTGCT...TGCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | GTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCAAACAGAGCGTGCCCGTaGTGCACTGGGTTGCGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VVPSVTQPCVPGRVPSSANRACP*CTGLRN Trigger: GTTGCGCAACCCAGTGCACAACGGGCACGCTCTGTT...TGCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | GTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCAGCTGACATGGTGGGCTaGATAGGTGACGTTGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VVPSVTQPCVPGRVPSSAADMVG*IGDVGC Trigger: GCAACCAACGTCACCTATCAAGCCCACCATGTCAGC...TGCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029666.14 ENSMUST00000197402.5 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCAATCCGGTCCAGGACTaGAAGATCTCCTCCAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSNPVQD*KISSNQ Trigger: CTGATTGGAGGAGATCTTCAAGTCCTGGACCGGATT...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | GTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCACTTTGGCACCATGTGTaGGCTCATAGAGGTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVPSVTQPCVPGRVPSSALWHHV*AHRGPS Trigger: GGAAGGACCTCTATGAGCCAACACATGGTGCCAAAG...TGCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | TGGGGCCATCGTCAGCACTTTGGCACCATGTGTTGGCTCATAGAGGTCCTTCCCGCTGACATGGTGGGCTaGATAGGTGACGTTGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: WGHRQHFGTMCWLIEVLPADMVG*IGDVGC Trigger: GCAACCAACGTCACCTATCAAGCCCACCATGTCAGC...GGGAAGGACCTCTATGAGCCAACACATGGTGCCAAAGTGCTGACGATGGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197402.5 |
||
| CDS-3UTR CAA 90 bp | CGTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCAATCAGCCAATCCCCTaGTTCCAGAACCATCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RGPLCYSAMRPRQSAQLSNQPIP*FQNHLD Trigger: ATCAAGATGGTTCTGGAACAAGGGGATTGGCTGATT...GCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | GATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTAAACAGAGCGTGCCCGTaGTGCACTGGGTTGCGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: DCKRTSTRRAARERGSSLNRACP*CTGLRN Trigger: GTTGCGCAACCCAGTGCACAACGGGCACGCTCTGTT...TAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | GTGGTCCCCTCTGTTACTCAGCCATGCGTCCCAGGCAGAGTGCCCAGCTCAGCAAATCAGCCAATCCCCTaGTTCCAGAACCATCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VVPSVTQPCVPGRVPSSANQPIP*FQNHLD Trigger: ATCAAGATGGTTCTGGAACAAGGGGATTGGCTGATT...TGCTGAGCTGGGCACTCTGCCTGGGACGCATGGCTGAGTAACAGAGGGGACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATCCTCATGAATCTGCCTaGCGTTGTTGCGATCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CKRTSTRRAARERGSSLHPHESA*RCCDPV Trigger: CACAGGATCGCAACAACGCAAGGCAGATTCATGAGG...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | GAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGGGTGGTTCTTGCATGTaGTTCCCCACTGTCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ERQTKTNARGGKRPDFRKGGSCM*FPTVWH Trigger: GTGCCAGACAGTGGGGAACAACATGCAAGAACCACC...CTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAGGTGGTTCTTGCATGTaGTTCCCCACTGTCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LKDRPKPMHAEGNGLISGGGSCM*FPTVWH Trigger: GTGCCAGACAGTGGGGAACAACATGCAAGAACCACC...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | GATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACTTTGGCACCATGTGTaGGCTCATAGAGGTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DCKRTSTRRAARERGSSLLWHHV*AHRGPS Trigger: GGAAGGACCTCTATGAGCCAACACATGGTGCCAAAG...TAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | GAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGGCCATCGTCAGCACTTaGGCACCATGTGTTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ERQTKTNARGGKRPDFRKAIVST*APCVGS Trigger: TGAGCCAACACATGGTGCCAAAGTGCTGACGATGGC...CTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | CAGACATGCAGAGGAGCATCGACAAAAACTTCAAAGAAGGGCAAGCTTGCACCCGCTGACATGGTGGGCTaGATAGGTGACGTTGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: QTCRGASTKTSKKGKLAPADMVG*IGDVGC Trigger: GCAACCAACGTCACCTATCAAGCCCACCATGTCAGC...GGGTGCAAGCTTGCCCTTCTTTGAAGTTTTTGTCGATGCTCCTCTGCATGTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196638.2 ENSMUST00000197402.5 |
||
| CDS-3UTR CAA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGACCTCATGAATCTGCCTaGCGTTGTTGCGATCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LKDRPKPMHAEGNGLISGPHESA*RCCDPV Trigger: CACAGGATCGCAACAACGCAAGGCAGATTCATGAGG...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATAATCCGGTCCAGGACTaGAAGATCTCCTCCAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: CKRTSTRRAARERGSSLHNPVQD*KISSNQ Trigger: CTGATTGGAGGAGATCTTCAAGTCCTGGACCGGATT...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATCTCTCCAGAAGCTGCTaGTGGGTATCCTGCATTAAC | + |
|
Preference number: 5 (lower is better) Translates to: CKRTSTRRAARERGSSLHLSRSC*WVSCIN Trigger: GTTAATGCAGGATACCCACAAGCAGCTTCTGGAGAG...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | GATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACTCTCCAGAAGCTGCTaGTGGGTATCCTGCATTAAC | + |
|
Preference number: 5 (lower is better) Translates to: DCKRTSTRRAARERGSSLLSRSC*WVSCIN Trigger: GTTAATGCAGGATACCCACAAGCAGCTTCTGGAGAG...TAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | AGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTTGCCATCGTCAGCACTTaGGCACCATGTGTTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: REPQHVGLQGRGGAVYIFAIVST*APCVGS Trigger: TGAGCCAACACATGGTGCCAAAGTGCTGACGATGGC...AAAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | TGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATGCGTTATTGCTCAGCTaGACTTTCTTGCACAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: CKRTSTRRAARERGSSLHALLLS*TFLHRL Trigger: GAGTCTGTGCAAGAAAGTCAAGCTGAGCAATAACGC...ATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029666.14 |
||
| CDS-3UTR CAA 90 bp | GATTGCAAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTAGTTCTTATTGAGTCCTaGGCGGATGTTGTCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: DCKRTSTRRAARERGSSLVLIES*ADVVTI Trigger: GATGGTGACAACATCCGCCAAGGACTCAATAAGAAC...TAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTTGCAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTCCTCATGAATCTGCCTaGCGTTGTTGCGATCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KRTSTRRAARERGSSLHFPHESA*RCCDPV Trigger: CACAGGATCGCAACAACGCAAGGCAGATTCATGAGG...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | GAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGATAGGCACCGATAAGTaGATGACGCCTCCATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ERQTKTNARGGKRPDFRKIGTDK*MTPPSR Trigger: TCTGGATGGAGGCGTCATCAACTTATCGGTGCCTAT...CTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTCTTTGGCACCATGTGTaGGCTCATAGAGGTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KRTSTRRAARERGSSLHFLWHHV*AHRGPS Trigger: GGAAGGACCTCTATGAGCCAACACATGGTGCCAAAG...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | GAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGCAGTTCTGCGCGTTATaGCTCAGCTTGACTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ERQTKTNARGGKRPDFRKQFCAL*LSLTFL Trigger: CAAGAAAGTCAAGCTGAGCAATAACGCGCAGAACTG...CTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029666.14 |
||
| CDS-3UTR CAA 90 bp | GAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAAGGTTCTTATTGAGTCCTaGGCGGATGTTGTCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: ERQTKTNARGGKRPDFRKVLIES*ADVVTI Trigger: GATGGTGACAACATCCGCCAAGGACTCAATAAGAAC...CTTCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | CTGAAAGACAGACCAAAACCAATGCACGCGGAGGGAAACGGCCTGATTTCAGGAGTTCTTATTGAGTCCTaGGCGGATGTTGTCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: LKDRPKPMHAEGNGLISGVLIES*ADVVTI Trigger: GATGGTGACAACATCCGCCAAGGACTCAATAAGAAC...TCCTGAAATCAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | AGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTTATAGGCACCGATAAGTaGATGACGCCTCCATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: REPQHVGLQGRGGAVYIFIGTDK*MTPPSR Trigger: TCTGGATGGAGGCGTCATCAACTTATCGGTGCCTAT...AAAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | AGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTTAATCCGGTCCAGGACTaGAAGATCTCCTCCAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: REPQHVGLQGRGGAVYIFNPVQD*KISSNQ Trigger: CTGATTGGAGGAGATCTTCAAGTCCTGGACCGGATT...AAAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
||
| CDS-3UTR CAA 90 bp | AAGAGAACCTCAACACGTAGGGCTGCAAGGGAGAGGGGGAGCAGTTTACATTTTCTCTCCAGAAGCTGCTaGTGGGTATCCTGCATTAAC | + |
|
Preference number: 5 (lower is better) Translates to: KRTSTRRAARERGSSLHFLSRSC*WVSCIN Trigger: GTTAATGCAGGATACCCACAAGCAGCTTCTGGAGAG...AAAATGTAAACTGCTCCCCCTCTCCCTTGCAGCCCTACGTGTTGAGGTTCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| CDS-3UTR CAA 90 bp | ACAATAAGTGGAAAAGATACATTAGAGCCAGCGTGGTGTTACACTAGTTTGAAAAATCAGCCAATCCCCTaGTTCCAGAACCATCTTGAT | + |
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Preference number: 5 (lower is better) Translates to: TISGKDTLEPAWCYTSLKNQPIP*FQNHLD Trigger: ATCAAGATGGTTCTGGAACAAGGGGATTGGCTGATT...TTTCAAACTAGTGTAACACCACGCTGGCTCTAATGTATCTTTTCCACTTATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| CDS GCA 72 bp | GAATGCCGTGGCACACCAGGTACTCCTCCAGAGCCATaGTCACGGTCGTCTTCCCTGCTCCGGACAATCCTG | + |
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Preference number: 6 (lower is better) Translates to: ECRGTPGTPPEP*SRSSSLLRTIL Trigger: CAGGATTGTCCGGAGCAGGGAAGACGACCGTGAGCATGGCTCTGGAGGAGTACCTGGTGTGCCACGGCATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| CDS GCA 72 bp | GTACTCCTCCAGAGCCATGCTCACGGTCGTCTTCCCTaGTCCGGACAATCCTGTCAGCCAAACTGTGCAACC | + |
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Preference number: 6 (lower is better) Translates to: VLLQSHAHGRLP*SGQSCQPNCAT Trigger: GGTTGCACAGTTTGGCTGACAGGATTGTCCGGAGCAGGGAAGACGACCGTGAGCATGGCTCTGGAGGAGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029666.14 ENSMUST00000199878.5 ENSMUST00000200527.5 |
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| CDS CAA 72 bp | TTGGTTGCTCTCTGCATCCCCCAGTTCTGCGCGTTATaGCTCAGCTTGACTTTCTTGCACAGACTCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: LVALCIPQFCAL*LSLTFLHRLPG Trigger: TCCTGGGAGTCTGTGCAAGAAAGTCAAGCTGAGCAATAACGCGCAGAACTGGGGGATGCAGAGAGCAACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029666.14 |
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